_A_04_TransRate

Assay: _A_04_TransRate
Short Name: 04_TransRate
Assay Class: DRY
Assay Type: TransRate
Title: TransRate post filtering and reassignment
Description: TransRate post filtering and reassignment
pISA Assay creation date: 2019-10-22
pISA Assay creator: Maja Zagorscak
Phenodata: None
Featuredata: None
Data: see ./input/path_to_files.txt

DOI: 10.15490/fairdomhub.1.assay.1172.1

Created at: 26th Nov 2019 at 12:19

Contents

/input/path_to_files.txt

No description specified

  • path_to_files.txt

/output/output.tar

No description specified

  • output.tar

/scripts/run_TransRate_commands.sh

No description specified

  • run_TransRate_commands.sh

Cultivar-specific transcriptome and pan-transcriptome reconstruction of tetraploid potato

Background: Although the reference genome of Solanum tuberosum group Phureja double-monoploid (DM) clone is available, knowledge on the genetic diversity of the highly heterozygous tetraploid group Tuberosum, representing most cultivated varieties, remains largely unexplored. This lack of knowledge hinders further progress in potato research and its subsequent applications in breeding.
Results: For the DM genome assembly, two only partially-overlapping gene models exist differing in a unique set
...

/_Assay_METADATA.TXT

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  • _Assay_METADATA.TXT

/README.MD

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  • README.MD
Fingerprints

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MD5: 9a893088270c554f76573fd8b9ac07b7

SHA1: f31512dd9fb9cef57d3c645a26f66a90ac32af8e

Citation
Zagorscak, M. (2019). _A_04_TransRate. FAIRDOMHub. http://doi.org/10.15490/FAIRDOMHUB.1.ASSAY.1172.1
Snapshots
Snapshot 1 (26th Nov 2019) DOI
Activity

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Created: 26th Nov 2019 at 12:19

Last updated: 26th Nov 2019 at 12:19

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