_A_03.1_filtering
DownloadAssay: _A_03.1_filtering Short Name: 03.1_filtering Assay Class: DRY Assay Type: filtering Title: Filtering according to biological evidence; removal of contaminants, chimeras and suspicious constructs Description: Filtering according to biological evidence; removal of contaminants, chimeras and suspicious constructs pISA Assay creation date: 2019-10-22 pISA Assay creator: Maja Zagorscak Phenodata: None Featuredata: None Data: see ./input/path_to_files.txt
DOI: 10.15490/fairdomhub.1.assay.1170.1
Zenodo URL: None
Created at: 26th Nov 2019 at 11:09
/output/Desiree_tr.cds.tsv.gz
Supplementary Table S3
Désirée biological evidence filtering results. Output of 1st filtering step by biological evidence for cv. Désirée.
- Desiree_tr.cds.tsv.gz
/output/PW363_tr.cds.tsv.gz
Supplementary Table S4
PW363 biological evidence filtering results. Output of 1st filtering step by biological evidence for breeding clone PW363.
- PW363_tr.cds.tsv.gz
/output/Rywal_tr.cds.tsv.gz
Supplementary Table S5
Rywal biological evidence filtering results. Output of 1st filtering step by biological evidence for cv. Rywal.
- Rywal_tr.cds.tsv.gz
/reports/03.1_Rywal_combo_withFiltering.html
No description specified
- 03.1_Rywal_combo_withFiltering.html
/reports/03.2_PW363_combo_withFiltering.html
No description specified
- 03.2_PW363_combo_withFiltering.html
/reports/03.3_Desiree_combo_withFiltering.html
No description specified
- 03.3_Desiree_combo_withFiltering.html
Cultivar-specific transcriptome and pan-transcriptome reconstruction of tetraploid potato
Background: Although the reference genome of Solanum tuberosum group Phureja double-monoploid (DM) clone is available, knowledge on the genetic diversity of the highly heterozygous tetraploid group Tuberosum, representing most cultivated varieties, remains largely unexplored. This lack of knowledge hinders further progress in potato research and its subsequent applications in breeding.
Results: For the DM genome assembly, two only partially-overlapping gene models exist differing in a unique set
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Created: 26th Nov 2019 at 11:09
Last updated: 26th Nov 2019 at 11:09
