_A_02.8_DIAMOND

Assay: _A_02.8_DIAMOND
Short Name: 02.8_DIAMOND
Assay Class: DRY
Assay Type: DIAMOND
Title: DIAMOND on raw tr2aacds output
Description: DIAMOND on raw tr2aacds output, both .cds and .tr; including lost and found
pISA Assay creation date: 2019-10-22
pISA Assay creator: Maja Zagorscak
Phenodata: None
Featuredata: None
Data: see ./input/path_to_files.txt

DOI: 10.15490/fairdomhub.1.assay.1169.1

Created at: 26th Nov 2019 at 12:08

Contents

/input/input.tar

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  • input.tar

/output/output.tar

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  • output.tar

/scripts/scripts.tar

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  • scripts.tar

Cultivar-specific transcriptome and pan-transcriptome reconstruction of tetraploid potato

Background: Although the reference genome of Solanum tuberosum group Phureja double-monoploid (DM) clone is available, knowledge on the genetic diversity of the highly heterozygous tetraploid group Tuberosum, representing most cultivated varieties, remains largely unexplored. This lack of knowledge hinders further progress in potato research and its subsequent applications in breeding.
Results: For the DM genome assembly, two only partially-overlapping gene models exist differing in a unique set
...

/_Assay_METADATA.TXT

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  • _Assay_METADATA.TXT

/README.MD

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  • README.MD
Fingerprints

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MD5: e97818066c02c346c56569f9f3b2c713

SHA1: a8dc9b904affe5c1006d90e8798827bd079fac1f

Citation
Zagorscak, M. (2019). _A_02.8_DIAMOND. FAIRDOMHub. http://doi.org/10.15490/FAIRDOMHUB.1.ASSAY.1169.1
Snapshots
Snapshot 1 (26th Nov 2019) DOI
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Created: 26th Nov 2019 at 12:08

Last updated: 26th Nov 2019 at 12:09

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