Assay: _A_01_evigene Short Name: 01_evigene Assay Class: DRY Assay Type: evigene Title: EvidentialGene tr2aacds.pl VERSION 2016.07.11 Description: See http://eugenes.org/EvidentialGene/about/EvidentialGene_trassembly_pipe.html pISA Assay creation date: 2019-10-22 pISA Assay creator: Maja Zagorscak Phenodata: None Featuredata: None Data: see ./input/path_to_files.txt

DOI: None

Zenodo URL: None

Created at: 24th Mar 2020 at 10:04



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  • path_to_files.txt


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  • 01_run_commands.sh


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  • my_tr2aacds.sh


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  • run_tr2aacds.sh


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  • intermediate_tr2aacds_Desiree.tar.gz


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  • intermediate_tr2aacds_PW363.tar.gz.aa


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  • intermediate_tr2aacds_PW363.tar.gz.ab


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  • intermediate_tr2aacds_Rywal.tar.gz


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  • output.tar

Cultivar-specific transcriptome and pan-transcriptome reconstruction of tetraploid potato

Background: Although the reference genome of Solanum tuberosum group Phureja double-monoploid (DM) clone is available, knowledge on the genetic diversity of the highly heterozygous tetraploid group Tuberosum, representing most cultivated varieties, remains largely unexplored. This lack of knowledge hinders further progress in potato research and its subsequent applications in breeding.
Results: For the DM genome assembly, two only partially-overlapping gene models exist differing in a unique set


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Snapshot 1 (24th Mar 2020)

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Created: 24th Mar 2020 at 10:04

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