Selected Cell
Cell:
Value:
SAMPLE CODE
A
B
C
D
E
F
G
H
I
J
K
L
M
N
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| Block | |||||||||||||
| 1 | Source | ||||||||||||
| LNU | |||||||||||||
| UDE | |||||||||||||
| P… | (practice) | ||||||||||||
| - | |||||||||||||
| 2 | first species | second | third | (when simultanious: in alphabetical order) | magnitude of cell density/ml at inoculation (or size of cell pellet in case of cont. culture) | ||||||||
| A | A | A | (A. caldus) | 6 | (10^#/ml) | ||||||||
| L | L | L | (L. ferriphilum) | 7 | |||||||||
| S | S | S | (S. thermosulfidooxidans) | 8 | |||||||||
| X | X | (none) | 9 | ||||||||||
| - | |||||||||||||
| 3 | sequential vs simultaniously vs continious | initial precolonization duration | second | ||||||||||
| Si | (single) | # | # | (in days, one digit each) | |||||||||
| Co | (combined/simultaneous) | ||||||||||||
| Pc | (preinoculated/sequential) | ||||||||||||
| - | |||||||||||||
| 4 | age | Replicate | |||||||||||
| ## | (in days, two digits) | A | |||||||||||
| Cn | (continiuous) | B | |||||||||||
| C | |||||||||||||
| … | |||||||||||||
| - | |||||||||||||
| 5 | planktonic/mineral | ||||||||||||
| P | (planktonic) | ||||||||||||
| M | (on mineral) | ||||||||||||
| - | |||||||||||||
| 6 | Biosample | Replicate | |||||||||||
| B | (Biosample, i.e. cells for biomol. extraction) | ## | (number of sample) | ||||||||||
| I | (Subsample for imaging) | ||||||||||||
| - | |||||||||||||
| 7 | BiomoleculeType | Replicate | |||||||||||
| R | (RNA) | ## | (number of sample) | ||||||||||
| D | (DNA) | (refers to elution # or used if sample has been split in multiple fractions) | |||||||||||
| Pr | (Protein) | ||||||||||||
| Examples | LNU-LXX9-Si-CnA-P-B1 | Cont. culture LNU, L. ferriphilum, inoculated with 10^9 cells, planktonic, cellpellet, first sample taken | |||||||||||
| LNU-LXX9-Si-CnA-P-B2 | See above, 2nd sample taken | ||||||||||||
| LNU-ASX7-Co-10C-M-B | Bioleaching LNU, A. caldus and S. thermosulfidoooxidans simultaniously inoculated with 10^7 per ml, after 10 days, third replicate, mineral portion | ||||||||||||
| UDE-LSX8-Pc40-05A-P-B | Bioleaching UDE, Lepto and then Sulfo, 10^8 cells per ml, Sulfo after 4 day prenoculation with lepto, sampling on day 5, first replicate, planktonic portion | ||||||||||||
| UDE-LSX8-Pc40-05A-P-B-R1 | RNA of sample above, first elution | ||||||||||||
| UDE-LSX8-Pc40-05A-M-I1 | See above, first mineral sample taken for imaging | ||||||||||||
