Showing for Sample Type: A.SCXP - CD4
33 Samples visible to you, out of a total of 33
| ID | Title | UID | File_PrimaryData | Link_PrimaryData | SampleCreationDate | Scientist | DataType | Protocol | Parent | Lab | Repository | RepositoryID | ReferenceGenome_Link | DemultiplexingTool | ReferenceGenome |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ID | Title | UID | File_PrimaryData | Link_PrimaryData | SampleCreationDate | Scientist | DataType | Protocol | Parent | Lab | Repository | RepositoryID | ReferenceGenome_Link | DemultiplexingTool | ReferenceGenome |
| 42992 | A.SCXP-221031SHA-2 | A.SCXP-221031SHA-2 | 12518_Array2.h5ad | https://singlecell.broadinstitute.org/single_cell/study/SCP2689/ | 2020-08-12 00:00:00 | Josh Bromley | H5AD | https://fairdomhub.org/sops/571 | D.SEQ-221031SHA-2 | Shalek Lab | Single Cell Portal | SCP2689 | https://www.ncbi.nlm.nih.gov/datasets/genome/GCF_000364345.1/ | Picard v3.1.1; STAR v2.7.0c; dropseq_tools v2.3.0 | GCF_000364345.1_Macaca_fascicularis_5.0 |
| 42993 | A.SCXP-221031SHA-3 | A.SCXP-221031SHA-3 | 12518_Array3.h5ad | https://singlecell.broadinstitute.org/single_cell/study/SCP2689/ | 2020-08-12 00:00:00 | Josh Bromley | H5AD | https://fairdomhub.org/sops/571 | D.SEQ-221031SHA-3 | Shalek Lab | Single Cell Portal | SCP2689 | https://www.ncbi.nlm.nih.gov/datasets/genome/GCF_000364345.1/ | Picard v3.1.1; STAR v2.7.0c; dropseq_tools v2.3.0 | GCF_000364345.1_Macaca_fascicularis_5.0 |
| 42994 | A.SCXP-221031SHA-4 | A.SCXP-221031SHA-4 | 12518_Array4.h5ad | https://singlecell.broadinstitute.org/single_cell/study/SCP2689/ | 2020-08-12 00:00:00 | Josh Bromley | H5AD | https://fairdomhub.org/sops/571 | D.SEQ-221031SHA-4 | Shalek Lab | Single Cell Portal | SCP2689 | https://www.ncbi.nlm.nih.gov/datasets/genome/GCF_000364345.1/ | Picard v3.1.1; STAR v2.7.0c; dropseq_tools v2.3.0 | GCF_000364345.1_Macaca_fascicularis_5.0 |
| 42995 | A.SCXP-221031SHA-5 | A.SCXP-221031SHA-5 | 12518_Array5.h5ad | https://singlecell.broadinstitute.org/single_cell/study/SCP2689/ | 2020-08-12 00:00:00 | Josh Bromley | H5AD | https://fairdomhub.org/sops/571 | D.SEQ-221031SHA-5 | Shalek Lab | Single Cell Portal | SCP2689 | https://www.ncbi.nlm.nih.gov/datasets/genome/GCF_000364345.1/ | Picard v3.1.1; STAR v2.7.0c; dropseq_tools v2.3.0 | GCF_000364345.1_Macaca_fascicularis_5.0 |
| 42996 | A.SCXP-221031SHA-8 | A.SCXP-221031SHA-8 | 12818_Array3.h5ad | https://singlecell.broadinstitute.org/single_cell/study/SCP2689/ | 2020-08-12 00:00:00 | Josh Bromley | H5AD | https://fairdomhub.org/sops/571 | D.SEQ-221031SHA-8 | Shalek Lab | Single Cell Portal | SCP2689 | https://www.ncbi.nlm.nih.gov/datasets/genome/GCF_000364345.1/ | Picard v3.1.1; STAR v2.7.0c; dropseq_tools v2.3.0 | GCF_000364345.1_Macaca_fascicularis_5.0 |
| 42997 | A.SCXP-221031SHA-9 | A.SCXP-221031SHA-9 | 12818_Array4.h5ad | https://singlecell.broadinstitute.org/single_cell/study/SCP2689/ | 2020-08-12 00:00:00 | Josh Bromley | H5AD | https://fairdomhub.org/sops/571 | D.SEQ-221031SHA-9 | Shalek Lab | Single Cell Portal | SCP2689 | https://www.ncbi.nlm.nih.gov/datasets/genome/GCF_000364345.1/ | Picard v3.1.1; STAR v2.7.0c; dropseq_tools v2.3.0 | GCF_000364345.1_Macaca_fascicularis_5.0 |
| 42998 | A.SCXP-221031SHA-10 | A.SCXP-221031SHA-10 | 12818_Array5.h5ad | https://singlecell.broadinstitute.org/single_cell/study/SCP2689/ | 2020-08-12 00:00:00 | Josh Bromley | H5AD | https://fairdomhub.org/sops/571 | D.SEQ-221031SHA-10 | Shalek Lab | Single Cell Portal | SCP2689 | https://www.ncbi.nlm.nih.gov/datasets/genome/GCF_000364345.1/ | Picard v3.1.1; STAR v2.7.0c; dropseq_tools v2.3.0 | GCF_000364345.1_Macaca_fascicularis_5.0 |
| 42999 | A.SCXP-221031SHA-11 | A.SCXP-221031SHA-11 | 12818_Array6.h5ad | https://singlecell.broadinstitute.org/single_cell/study/SCP2689/ | 2020-08-12 00:00:00 | Josh Bromley | H5AD | https://fairdomhub.org/sops/571 | D.SEQ-221031SHA-11 | Shalek Lab | Single Cell Portal | SCP2689 | https://www.ncbi.nlm.nih.gov/datasets/genome/GCF_000364345.1/ | Picard v3.1.1; STAR v2.7.0c; dropseq_tools v2.3.0 | GCF_000364345.1_Macaca_fascicularis_5.0 |
| 43000 | A.SCXP-221031SHA-13 | A.SCXP-221031SHA-13 | 13518_Array2.h5ad | https://singlecell.broadinstitute.org/single_cell/study/SCP2689/ | 2020-08-12 00:00:00 | Josh Bromley | H5AD | https://fairdomhub.org/sops/571 | D.SEQ-221031SHA-13 | Shalek Lab | Single Cell Portal | SCP2689 | https://www.ncbi.nlm.nih.gov/datasets/genome/GCF_000364345.1/ | Picard v3.1.1; STAR v2.7.0c; dropseq_tools v2.3.0 | GCF_000364345.1_Macaca_fascicularis_5.0 |
| 43001 | A.SCXP-221031SHA-15 | A.SCXP-221031SHA-15 | 13518_Array4.h5ad | https://singlecell.broadinstitute.org/single_cell/study/SCP2689/ | 2020-08-12 00:00:00 | Josh Bromley | H5AD | https://fairdomhub.org/sops/571 | D.SEQ-221031SHA-15 | Shalek Lab | Single Cell Portal | SCP2689 | https://www.ncbi.nlm.nih.gov/datasets/genome/GCF_000364345.1/ | Picard v3.1.1; STAR v2.7.0c; dropseq_tools v2.3.0 | GCF_000364345.1_Macaca_fascicularis_5.0 |
| 43002 | A.SCXP-221031SHA-16 | A.SCXP-221031SHA-16 | 13518_Array5.h5ad | https://singlecell.broadinstitute.org/single_cell/study/SCP2689/ | 2020-08-12 00:00:00 | Josh Bromley | H5AD | https://fairdomhub.org/sops/571 | D.SEQ-221031SHA-16 | Shalek Lab | Single Cell Portal | SCP2689 | https://www.ncbi.nlm.nih.gov/datasets/genome/GCF_000364345.1/ | Picard v3.1.1; STAR v2.7.0c; dropseq_tools v2.3.0 | GCF_000364345.1_Macaca_fascicularis_5.0 |
| 43003 | A.SCXP-221031SHA-17 | A.SCXP-221031SHA-17 | 13518_Array6.h5ad | https://singlecell.broadinstitute.org/single_cell/study/SCP2689/ | 2020-08-12 00:00:00 | Josh Bromley | H5AD | https://fairdomhub.org/sops/571 | D.SEQ-221031SHA-17 | Shalek Lab | Single Cell Portal | SCP2689 | https://www.ncbi.nlm.nih.gov/datasets/genome/GCF_000364345.1/ | Picard v3.1.1; STAR v2.7.0c; dropseq_tools v2.3.0 | GCF_000364345.1_Macaca_fascicularis_5.0 |
| 43004 | A.SCXP-221031SHA-20 | A.SCXP-221031SHA-20 | 13818_Array10.h5ad | https://singlecell.broadinstitute.org/single_cell/study/SCP2689/ | 2020-08-12 00:00:00 | Josh Bromley | H5AD | https://fairdomhub.org/sops/571 | D.SEQ-221031SHA-20 | Shalek Lab | Single Cell Portal | SCP2689 | https://www.ncbi.nlm.nih.gov/datasets/genome/GCF_000364345.1/ | Picard v3.1.1; STAR v2.7.0c; dropseq_tools v2.3.0 | GCF_000364345.1_Macaca_fascicularis_5.0 |
| 43005 | A.SCXP-221031SHA-21 | A.SCXP-221031SHA-21 | 13818_Array11.h5ad | https://singlecell.broadinstitute.org/single_cell/study/SCP2689/ | 2020-08-12 00:00:00 | Josh Bromley | H5AD | https://fairdomhub.org/sops/571 | D.SEQ-221031SHA-21 | Shalek Lab | Single Cell Portal | SCP2689 | https://www.ncbi.nlm.nih.gov/datasets/genome/GCF_000364345.1/ | Picard v3.1.1; STAR v2.7.0c; dropseq_tools v2.3.0 | GCF_000364345.1_Macaca_fascicularis_5.0 |
| 43006 | A.SCXP-221031SHA-22 | A.SCXP-221031SHA-22 | 13818_Array12.h5ad | https://singlecell.broadinstitute.org/single_cell/study/SCP2689/ | 2020-08-12 00:00:00 | Josh Bromley | H5AD | https://fairdomhub.org/sops/571 | D.SEQ-221031SHA-22 | Shalek Lab | Single Cell Portal | SCP2689 | https://www.ncbi.nlm.nih.gov/datasets/genome/GCF_000364345.1/ | Picard v3.1.1; STAR v2.7.0c; dropseq_tools v2.3.0 | GCF_000364345.1_Macaca_fascicularis_5.0 |
| 43007 | A.SCXP-221031SHA-25 | A.SCXP-221031SHA-25 | 13818_Array8.h5ad | https://singlecell.broadinstitute.org/single_cell/study/SCP2689/ | 2020-08-12 00:00:00 | Josh Bromley | H5AD | https://fairdomhub.org/sops/571 | D.SEQ-221031SHA-25 | Shalek Lab | Single Cell Portal | SCP2689 | https://www.ncbi.nlm.nih.gov/datasets/genome/GCF_000364345.1/ | Picard v3.1.1; STAR v2.7.0c; dropseq_tools v2.3.0 | GCF_000364345.1_Macaca_fascicularis_5.0 |
| 43008 | A.SCXP-221031SHA-26 | A.SCXP-221031SHA-26 | 13818_Array9.h5ad | https://singlecell.broadinstitute.org/single_cell/study/SCP2689/ | 2020-08-12 00:00:00 | Josh Bromley | H5AD | https://fairdomhub.org/sops/571 | D.SEQ-221031SHA-26 | Shalek Lab | Single Cell Portal | SCP2689 | https://www.ncbi.nlm.nih.gov/datasets/genome/GCF_000364345.1/ | Picard v3.1.1; STAR v2.7.0c; dropseq_tools v2.3.0 | GCF_000364345.1_Macaca_fascicularis_5.0 |
| 43009 | A.SCXP-221031SHA-27 | A.SCXP-221031SHA-27 | 13918_Array10.h5ad | https://singlecell.broadinstitute.org/single_cell/study/SCP2689/ | 2020-08-12 00:00:00 | Josh Bromley | H5AD | https://fairdomhub.org/sops/571 | D.SEQ-221031SHA-27 | Shalek Lab | Single Cell Portal | SCP2689 | https://www.ncbi.nlm.nih.gov/datasets/genome/GCF_000364345.1/ | Picard v3.1.1; STAR v2.7.0c; dropseq_tools v2.3.0 | GCF_000364345.1_Macaca_fascicularis_5.0 |
| 43010 | A.SCXP-221031SHA-28 | A.SCXP-221031SHA-28 | 13918_Array11.h5ad | https://singlecell.broadinstitute.org/single_cell/study/SCP2689/ | 2020-08-12 00:00:00 | Josh Bromley | H5AD | https://fairdomhub.org/sops/571 | D.SEQ-221031SHA-28 | Shalek Lab | Single Cell Portal | SCP2689 | https://www.ncbi.nlm.nih.gov/datasets/genome/GCF_000364345.1/ | Picard v3.1.1; STAR v2.7.0c; dropseq_tools v2.3.0 | GCF_000364345.1_Macaca_fascicularis_5.0 |
| 43011 | A.SCXP-221031SHA-29 | A.SCXP-221031SHA-29 | 13918_Array12.h5ad | https://singlecell.broadinstitute.org/single_cell/study/SCP2689/ | 2020-08-12 00:00:00 | Josh Bromley | H5AD | https://fairdomhub.org/sops/571 | D.SEQ-221031SHA-29 | Shalek Lab | Single Cell Portal | SCP2689 | https://www.ncbi.nlm.nih.gov/datasets/genome/GCF_000364345.1/ | Picard v3.1.1; STAR v2.7.0c; dropseq_tools v2.3.0 | GCF_000364345.1_Macaca_fascicularis_5.0 |
| 43012 | A.SCXP-221031SHA-32 | A.SCXP-221031SHA-32 | 13918_Array8.h5ad | https://singlecell.broadinstitute.org/single_cell/study/SCP2689/ | 2020-08-12 00:00:00 | Josh Bromley | H5AD | https://fairdomhub.org/sops/571 | D.SEQ-221031SHA-32 | Shalek Lab | Single Cell Portal | SCP2689 | https://www.ncbi.nlm.nih.gov/datasets/genome/GCF_000364345.1/ | Picard v3.1.1; STAR v2.7.0c; dropseq_tools v2.3.0 | GCF_000364345.1_Macaca_fascicularis_5.0 |
| 43013 | A.SCXP-221031SHA-33 | A.SCXP-221031SHA-33 | 13918_Array9.h5ad | https://singlecell.broadinstitute.org/single_cell/study/SCP2689/ | 2020-08-12 00:00:00 | Josh Bromley | H5AD | https://fairdomhub.org/sops/571 | D.SEQ-221031SHA-33 | Shalek Lab | Single Cell Portal | SCP2689 | https://www.ncbi.nlm.nih.gov/datasets/genome/GCF_000364345.1/ | Picard v3.1.1; STAR v2.7.0c; dropseq_tools v2.3.0 | GCF_000364345.1_Macaca_fascicularis_5.0 |
| 43014 | A.SCXP-221031SHA-35 | A.SCXP-221031SHA-35 | 14018_Array2.h5ad | https://singlecell.broadinstitute.org/single_cell/study/SCP2689/ | 2020-08-12 00:00:00 | Josh Bromley | H5AD | https://fairdomhub.org/sops/571 | D.SEQ-221031SHA-35 | Shalek Lab | Single Cell Portal | SCP2689 | https://www.ncbi.nlm.nih.gov/datasets/genome/GCF_000364345.1/ | Picard v3.1.1; STAR v2.7.0c; dropseq_tools v2.3.0 | GCF_000364345.1_Macaca_fascicularis_5.0 |
| 43015 | A.SCXP-221031SHA-36 | A.SCXP-221031SHA-36 | 14018_Array3.h5ad | https://singlecell.broadinstitute.org/single_cell/study/SCP2689/ | 2020-08-12 00:00:00 | Josh Bromley | H5AD | https://fairdomhub.org/sops/571 | D.SEQ-221031SHA-36 | Shalek Lab | Single Cell Portal | SCP2689 | https://www.ncbi.nlm.nih.gov/datasets/genome/GCF_000364345.1/ | Picard v3.1.1; STAR v2.7.0c; dropseq_tools v2.3.0 | GCF_000364345.1_Macaca_fascicularis_5.0 |
| 43016 | A.SCXP-221031SHA-37 | A.SCXP-221031SHA-37 | 14018_Array4.h5ad | https://singlecell.broadinstitute.org/single_cell/study/SCP2689/ | 2020-08-12 00:00:00 | Josh Bromley | H5AD | https://fairdomhub.org/sops/571 | D.SEQ-221031SHA-37 | Shalek Lab | Single Cell Portal | SCP2689 | https://www.ncbi.nlm.nih.gov/datasets/genome/GCF_000364345.1/ | Picard v3.1.1; STAR v2.7.0c; dropseq_tools v2.3.0 | GCF_000364345.1_Macaca_fascicularis_5.0 |
| 43017 | A.SCXP-221031SHA-38 | A.SCXP-221031SHA-38 | 14018_Array5.h5ad | https://singlecell.broadinstitute.org/single_cell/study/SCP2689/ | 2020-08-12 00:00:00 | Josh Bromley | H5AD | https://fairdomhub.org/sops/571 | D.SEQ-221031SHA-38 | Shalek Lab | Single Cell Portal | SCP2689 | https://www.ncbi.nlm.nih.gov/datasets/genome/GCF_000364345.1/ | Picard v3.1.1; STAR v2.7.0c; dropseq_tools v2.3.0 | GCF_000364345.1_Macaca_fascicularis_5.0 |
| 43018 | A.SCXP-221031SHA-40 | A.SCXP-221031SHA-40 | 14218_Array10.h5ad | https://singlecell.broadinstitute.org/single_cell/study/SCP2689/ | 2020-08-12 00:00:00 | Josh Bromley | H5AD | https://fairdomhub.org/sops/571 | D.SEQ-221031SHA-40 | Shalek Lab | Single Cell Portal | SCP2689 | https://www.ncbi.nlm.nih.gov/datasets/genome/GCF_000364345.1/ | Picard v3.1.1; STAR v2.7.0c; dropseq_tools v2.3.0 | GCF_000364345.1_Macaca_fascicularis_5.0 |
| 43019 | A.SCXP-221031SHA-41 | A.SCXP-221031SHA-41 | 14218_Array11.h5ad | https://singlecell.broadinstitute.org/single_cell/study/SCP2689/ | 2020-08-12 00:00:00 | Josh Bromley | H5AD | https://fairdomhub.org/sops/571 | D.SEQ-221031SHA-41 | Shalek Lab | Single Cell Portal | SCP2689 | https://www.ncbi.nlm.nih.gov/datasets/genome/GCF_000364345.1/ | Picard v3.1.1; STAR v2.7.0c; dropseq_tools v2.3.0 | GCF_000364345.1_Macaca_fascicularis_5.0 |
| 43020 | A.SCXP-221031SHA-42 | A.SCXP-221031SHA-42 | 14218_Array12.h5ad | https://singlecell.broadinstitute.org/single_cell/study/SCP2689/ | 2020-08-12 00:00:00 | Josh Bromley | H5AD | https://fairdomhub.org/sops/571 | D.SEQ-221031SHA-42 | Shalek Lab | Single Cell Portal | SCP2689 | https://www.ncbi.nlm.nih.gov/datasets/genome/GCF_000364345.1/ | Picard v3.1.1; STAR v2.7.0c; dropseq_tools v2.3.0 | GCF_000364345.1_Macaca_fascicularis_5.0 |
| 43021 | A.SCXP-221031SHA-44 | A.SCXP-221031SHA-44 | 14218_Array8.h5ad | https://singlecell.broadinstitute.org/single_cell/study/SCP2689/ | 2020-08-12 00:00:00 | Josh Bromley | H5AD | https://fairdomhub.org/sops/571 | D.SEQ-221031SHA-44 | Shalek Lab | Single Cell Portal | SCP2689 | https://www.ncbi.nlm.nih.gov/datasets/genome/GCF_000364345.1/ | Picard v3.1.1; STAR v2.7.0c; dropseq_tools v2.3.0 | GCF_000364345.1_Macaca_fascicularis_5.0 |
| 43022 | A.SCXP-221031SHA-45 | A.SCXP-221031SHA-45 | 14218_Array9.h5ad | https://singlecell.broadinstitute.org/single_cell/study/SCP2689/ | 2020-08-12 00:00:00 | Josh Bromley | H5AD | https://fairdomhub.org/sops/571 | D.SEQ-221031SHA-45 | Shalek Lab | Single Cell Portal | SCP2689 | https://www.ncbi.nlm.nih.gov/datasets/genome/GCF_000364345.1/ | Picard v3.1.1; STAR v2.7.0c; dropseq_tools v2.3.0 | GCF_000364345.1_Macaca_fascicularis_5.0 |
| 43023 | A.SCXP-231215SHA-12 | A.SCXP-231215SHA-12 | 12818_Reinf_Array2Granulo_dge.txt.gz | https://singlecell.broadinstitute.org/single_cell/study/SCP2689/ | 2022-03-06 00:00:00 | Josh Bromley | TXT | https://fairdomhub.org/sops/571 | D.SEQ-231215SHA-12 | Shalek Lab | Single Cell Portal | SCP2689 | https://www.ncbi.nlm.nih.gov/datasets/genome/GCF_000364345.1/ | Picard v3.1.1; STAR v2.7.0c; dropseq_tools v2.3.0 | GCF_000364345.1_Macaca_fascicularis_5.0 |
| 43024 | A.SCXP-231215SHA-29 | A.SCXP-231215SHA-29 | 13518_Reinf_Array3Granulo_dge.txt.gz | https://singlecell.broadinstitute.org/single_cell/study/SCP2689/ | 2022-03-06 00:00:00 | Josh Bromley | TXT | https://fairdomhub.org/sops/571 | D.SEQ-231215SHA-29 | Shalek Lab | Single Cell Portal | SCP2689 | https://www.ncbi.nlm.nih.gov/datasets/genome/GCF_000364345.1/ | Picard v3.1.1; STAR v2.7.0c; dropseq_tools v2.3.0 | GCF_000364345.1_Macaca_fascicularis_5.0 |
