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Programme
HUMET32
Disease Maps7
SysMO5
Independent Projects3
ERASysAPP2
COMBINE (Computational Modeling in Biology Network)2
The Digital Salmon1
NIBSys1
FAIRDOM1
Model repository for M4 (Make Me My Model) clients of ISBE1
e:med1
SAFE-Aqua1
Era CoBioTech1
Hallmarks of cancer 1
C19DM-Neo4j1
NL-Bioimaging: FAIR-DM 1
VHP Programme1
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Project
HUMET Startup32
COVID-19 Disease Map7
COSMIC2
COMBINE Multicellular Modelling2
PoLiMeR - Polymers in the Liver: Metabolism and Regulation2
BaCell-SysMO1
SysMO-LAB1
PSYSMO1
TRANSLUCENT1
SysMO DB1
FAIRDOM1
IMOMESIC1
iRhythmics1
SYSTERACT1
GenoSysFat1
DigiSal1
EmPowerPutida1
MycoSynVac - Engineering Mycoplasma pneumoniae as a broad-spectrum animal vaccine1
EraCoBiotech 2 nd call proposal preparation1
SAFE-Aqua1
INCOME1
BESTER1
INDIE - Biotechnological production of sustainable indole1
C19DM-Neo4j1
Consensus Hallmark Annotation1
SASKit: Senescence-Associated Systems diagnostics Kit for cancer and stroke1
NL-Bioimaging FAIR Metadata Templates1
FAIR Functional Enrichment1
VHP project1
Benefit for All FAIR Data1
Implementation of Nanopore Sequencing for Detection of Treatment Induced Transcriptomic and Epitranscriptomic Changes in Leukaemic Tumour Models1
CureQ demo1
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Institution
University of Amsterdam4
Wageningen University & Research4
University Maastricht3
Humboldt-Universität zu Berlin2
Humboldt University Berlin2
Helmholtz Centre for Infection Research Braunschweig1
University of Leiden1
University of Rostock1
Chalmers University of Technology1
Leiden University Medical Center1
University of Luxembourg1
University of Gothenburg1
Centro de Investigación Príncipe Felipe1
University of Ulster1
European Institute for Systems Biology and Medicine1
Universitair ziekenhuis Antwerpen1
geneXplain GmbH1
Université catholique de Louvain1
University Medical Center Hamburg - Eppendorf Hamburg1
Liverpool John Moores University1
Institut Pasteur1
AstraZeneca1
University of Lausanne1
University of Zurich1
Bilkent University1
KTH Royal Institute of Technology1
Luxembourg Centre for Systems Biomedicine (LCSB)1
Fundación Progreso y Salud1
Amsterdam UMC1
LIACS1
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Location
Netherlands13
Germany6
United Kingdom3
Belgium2
Switzerland2
France2
Luxembourg2
Sweden2
Spain1
Türkiye1
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Expertise
Systems Biology8
Bioinformatics5
Mathematical modelling3
Nutrition3
Data Integration3
Metabolic Networks3
Biochemistry2
Genetics2
Data Management2
Transcriptomics2
Metabolomics2
Microarray analysis2
Data analysis2
metabolism2
Lipids2
nuclear receptors2
human energy metabolism2
mouse studies2
Microbiology1
Genomics1
dynamics of biological networks1
Data analysis
Mathematical modelling
Bioinformatics
Systems biology1
Mathematical modelling of biosystems and bioprocesses1
gene regulation1
Optimal experimental design1
Biotechnology1
Metabolic Models1
Liver1
diabetes1
Epigenetics1
microbiomics1
SBGN standard1
Data analysisMathematical modellingBioinformaticsSystems biology1
chromatin1
nuclear organisation1
DNA repair1
Systems Medicine1
Systems Biology Graphical Notation1
Metabolic Control Analaysis1
Hepatology1
Non-alcoholic fatty liver disease1
energy expenditure1
type 2 diabetes1
human translational research1
energy turnover1
muscle1
promoters and anhancers1
signal transduction1
drug targets1
experiments1
lipdomics1
Gut microbiota1
Akkermansia muciniphila1
Obesity1
Endocannabinoid system1
Cell specific KO1
Innate immunity1
Prebiotics1
Probiotics1
Insulin resistance1
Inflammation1
Skeletal muscle physiology and metabolism1
Integrative Human Phsyoiology and Metabolism1
Confocal Immunofluoresence Microscopy visualising Muscle Metabolism1
Endothelial arteriolar and capillary metabolism1
Substrate fluxes across organs measured with stable Isotope Tracers1
Generating in vivo human data to feed metabolic models1
Interface between physiologists and modellers1
neuroanatomy1
endocrinology1
chronobiology1
pathology of type 2 diabetes and cardiovascualr disease1
metabolic homeostasis1
Network Visualization1
Graphical Editors1
Pharmacokinetics1
Toxicology1
Disease Maps1
Dynamics and Control of Biological Networks1
Computational Biology1
Kinetics1
interoperability1
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Tool
Transcriptomics6
Bioinformatics3
Metabolomics3
Systems Biology3
Data Management2
Computational and theoretical biology2
Genetic modification2
Proteomics2
Databases2
Matlab2
Microarray analysis2
R2
differential algebraic equations2
Computational Systems Biology2
Newt Editor2
Microbiology1
Biochemistry1
Genetics1
Molecular Biology1
Biochemistry and protein analysis1
Cell biology1
Cell and tissue culture1
Genomics1
Model organisms1
ODE1
Java1
Workflows1
Web services1
Mathematica1
Fermentation1
Taverna1
Ontologies1
stimulus response experiments1
quantitative western blot analyses1
quantitative western blot analysis1
Stochastic models1
Deterministic models1
Dynamic modelling1
Flux balance analysis1
Metabolic Engineering1
metabolic labeling1
Molecular biology techniques (RNA/DNA/Protein)1
stochastic methods1
microbiology techniques1
model prediction testing1
reverse engineering1
computational platform development1
metabolic netwlrk visualization1
semantic web1
SBGN1
c++1
High Performance Computing1
energy metabolism1
ChIP-seq1
SBGN-ED1
CellDesigner1
quantitative microscopy1
indirect calorimetry1
human metabolic research1
geneXplain platform1
BioUML1
stable isotopes1
lipidomics1
Animal models1
Integrative physiology1
Glucose metabolism1
Lipid metabolism1
LPS measurments1
Gut microbiota analysis1
Isotope Ratio Mass Spectrometry1
Confocal Immunofluorescence microscopy1
In vivo measurement of susbstrate fluxes in humans1
Visualisation of muscle and microvascular metabolism in muscle sections1
hyperinsulinemic clamp in rats1
stereotactic surgery1
GWAS1
WES/WGS1
mouse models1
patient interventions1
metabolic phenotyping1
SBGNViz1
cBioPortal1
PathwayMapper1
ChiBE1
wikipathways1
pathvisio1
Data Integration1
Parameter estimation1
bridgedb1
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32
People found
I am an Assistant Professor at Leiden University in the Leiden Institute of Advanced Computer Science. I am a bioinformatician and my research interests are in data integration. I use scientific workflows and semantic web technologies to integrate and analyse data in systems biology and functional genomics.
Projects: HUMET Startup
Institutions: Wageningen University & Research
https://orcid.org/0000-0002-1279-5133