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other/norm_cf_lcpm_MDS.pdf

SUSPHIRE - Sustainable Bioproduction of Pheromones for Insect Pest Control in Agriculture

_p_SUSPHIRE/_I_T31_mealybug/_S_P4_Pcitri_genome/_A_03_limma_min50counts-R/

Creator: Marko Petek

Submitter: Marko Petek

Investigations: _I_T31_mealybug

Studies: _S_P4_Pcitri_genome

Assays: _A_03_limma_min50counts-R

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Created: 16th May 2022 at 11:25, Last updated: 6th Nov 2024 at 15:26

other/norm_counts_filtered_MDS.pdf

SUSPHIRE - Sustainable Bioproduction of Pheromones for Insect Pest Control in Agriculture

_p_SUSPHIRE/_I_T31_mealybug/_S_P4_Pcitri_genome/_A_03_limma_min50counts-R/

Creator: Marko Petek

Submitter: Marko Petek

Investigations: _I_T31_mealybug

Studies: _S_P4_Pcitri_genome

Assays: _A_03_limma_min50counts-R

Download

Created: 16th May 2022 at 11:25, Last updated: 6th Nov 2024 at 15:26

other/norm_counts_raw&filtered_densityplots.pdf

SUSPHIRE - Sustainable Bioproduction of Pheromones for Insect Pest Control in Agriculture

_p_SUSPHIRE/_I_T31_mealybug/_S_P4_Pcitri_genome/_A_03_limma_min50counts-R/

Creator: Marko Petek

Submitter: Marko Petek

Investigations: _I_T31_mealybug

Studies: _S_P4_Pcitri_genome

Assays: _A_03_limma_min50counts-R

Download

Created: 16th May 2022 at 11:25, Last updated: 6th Nov 2024 at 15:26

input/README.MD

SUSPHIRE - Sustainable Bioproduction of Pheromones for Insect Pest Control in Agriculture

_p_SUSPHIRE/_I_T31_mealybug/_S_P4_Pcitri_genome/_A_02_limma-R/

Creator: Marko Petek

Submitter: Marko Petek

Investigations: _I_T31_mealybug

Studies: _S_P4_Pcitri_genome

Assays: _A_02_limma-R

Download

Created: 16th May 2022 at 10:49, Last updated: 6th Nov 2024 at 15:26

other/density_plot_before_lowexpr_filter.pdf

SUSPHIRE - Sustainable Bioproduction of Pheromones for Insect Pest Control in Agriculture

_p_SUSPHIRE/_I_T31_mealybug/_S_P4_Pcitri_genome/_A_02_limma-R/

Creator: Marko Petek

Submitter: Marko Petek

Investigations: _I_T31_mealybug

Studies: _S_P4_Pcitri_genome

Assays: _A_02_limma-R

Download

Created: 16th May 2022 at 10:49, Last updated: 6th Nov 2024 at 15:26

other/log10filteredcounts_boxplot.pdf

SUSPHIRE - Sustainable Bioproduction of Pheromones for Insect Pest Control in Agriculture

_p_SUSPHIRE/_I_T31_mealybug/_S_P4_Pcitri_genome/_A_02_limma-R/

Creator: Marko Petek

Submitter: Marko Petek

Investigations: _I_T31_mealybug

Studies: _S_P4_Pcitri_genome

Assays: _A_02_limma-R

Download

Created: 16th May 2022 at 10:49, Last updated: 6th Nov 2024 at 15:26

other/log10rawcounts_boxplot.pdf

SUSPHIRE - Sustainable Bioproduction of Pheromones for Insect Pest Control in Agriculture

_p_SUSPHIRE/_I_T31_mealybug/_S_P4_Pcitri_genome/_A_02_limma-R/

Creator: Marko Petek

Submitter: Marko Petek

Investigations: _I_T31_mealybug

Studies: _S_P4_Pcitri_genome

Assays: _A_02_limma-R

Download

Created: 16th May 2022 at 10:49, Last updated: 6th Nov 2024 at 15:26

other/norm_cf_lcpm_MDS.pdf

SUSPHIRE - Sustainable Bioproduction of Pheromones for Insect Pest Control in Agriculture

_p_SUSPHIRE/_I_T31_mealybug/_S_P4_Pcitri_genome/_A_02_limma-R/

Creator: Marko Petek

Submitter: Marko Petek

Investigations: _I_T31_mealybug

Studies: _S_P4_Pcitri_genome

Assays: _A_02_limma-R

Download

Created: 16th May 2022 at 10:49, Last updated: 6th Nov 2024 at 15:26

other/norm_counts_filtered_MDS.pdf

SUSPHIRE - Sustainable Bioproduction of Pheromones for Insect Pest Control in Agriculture

_p_SUSPHIRE/_I_T31_mealybug/_S_P4_Pcitri_genome/_A_02_limma-R/

Creator: Marko Petek

Submitter: Marko Petek

Investigations: _I_T31_mealybug

Studies: _S_P4_Pcitri_genome

Assays: _A_02_limma-R

Download

Created: 16th May 2022 at 10:49, Last updated: 6th Nov 2024 at 15:26

other/norm_counts_raw&filtered_densityplots.pdf

SUSPHIRE - Sustainable Bioproduction of Pheromones for Insect Pest Control in Agriculture

_p_SUSPHIRE/_I_T31_mealybug/_S_P4_Pcitri_genome/_A_02_limma-R/

Creator: Marko Petek

Submitter: Marko Petek

Investigations: _I_T31_mealybug

Studies: _S_P4_Pcitri_genome

Assays: _A_02_limma-R

Download

Created: 16th May 2022 at 10:49, Last updated: 6th Nov 2024 at 15:26

other/PCA_biplot.pdf

SUSPHIRE - Sustainable Bioproduction of Pheromones for Insect Pest Control in Agriculture

_p_SUSPHIRE/_I_T31_mealybug/_S_P4_Pcitri_genome/_A_02_limma-R/

Creator: Marko Petek

Submitter: Marko Petek

Investigations: _I_T31_mealybug

Studies: _S_P4_Pcitri_genome

Assays: _A_02_limma-R

Download

Created: 16th May 2022 at 10:50, Last updated: 6th Nov 2024 at 15:26

other/SIGMA_vs_A_plot.pdf

SUSPHIRE - Sustainable Bioproduction of Pheromones for Insect Pest Control in Agriculture

_p_SUSPHIRE/_I_T31_mealybug/_S_P4_Pcitri_genome/_A_02_limma-R/

Creator: Marko Petek

Submitter: Marko Petek

Investigations: _I_T31_mealybug

Studies: _S_P4_Pcitri_genome

Assays: _A_02_limma-R

Download

Created: 16th May 2022 at 11:22, Last updated: 6th Nov 2024 at 15:26

reports/PRO1976_S4_VF_6_GAGAGTAC-TGGAAGCA_L007_R1 (paired) trimmed (paired) RNA-Seq report.pdf

SUSPHIRE - Sustainable Bioproduction of Pheromones for Insect Pest Control in Agriculture

_p_SUSPHIRE/_I_T31_mealybug/_S_P4_Pcitri_genome/_A_01_RNAseq-CLC/

Creator: Marko Petek

Submitter: Marko Petek

Investigations: _I_T31_mealybug

Studies: _S_P4_Pcitri_genome

Assays: _A_01_RNAseq-CLC

Download

Created: 16th May 2022 at 10:48, Last updated: 6th Nov 2024 at 15:26

reports/PRO1976_S5_MF_8_TCTACGCA-CAATAGCC_L007_R1 (paired) report.pdf

SUSPHIRE - Sustainable Bioproduction of Pheromones for Insect Pest Control in Agriculture

_p_SUSPHIRE/_I_T31_mealybug/_S_P4_Pcitri_genome/_A_01_RNAseq-CLC/

Creator: Marko Petek

Submitter: Marko Petek

Investigations: _I_T31_mealybug

Studies: _S_P4_Pcitri_genome

Assays: _A_01_RNAseq-CLC

Download

Created: 16th May 2022 at 10:49, Last updated: 6th Nov 2024 at 15:26

reports/PRO1976_S5_MF_8_TCTACGCA-CAATAGCC_L007_R1 (paired) trimmed (paired) RNA-Seq report.pdf

SUSPHIRE - Sustainable Bioproduction of Pheromones for Insect Pest Control in Agriculture

_p_SUSPHIRE/_I_T31_mealybug/_S_P4_Pcitri_genome/_A_01_RNAseq-CLC/

Creator: Marko Petek

Submitter: Marko Petek

Investigations: _I_T31_mealybug

Studies: _S_P4_Pcitri_genome

Assays: _A_01_RNAseq-CLC

Download

Created: 16th May 2022 at 10:49, Last updated: 6th Nov 2024 at 15:26

reports/PRO1976_S6_MF_9_GCAATTCC-CTCGAACA_L007_R1 (paired) report.pdf

SUSPHIRE - Sustainable Bioproduction of Pheromones for Insect Pest Control in Agriculture

_p_SUSPHIRE/_I_T31_mealybug/_S_P4_Pcitri_genome/_A_01_RNAseq-CLC/

Creator: Marko Petek

Submitter: Marko Petek

Investigations: _I_T31_mealybug

Studies: _S_P4_Pcitri_genome

Assays: _A_01_RNAseq-CLC

Download

Created: 16th May 2022 at 10:49, Last updated: 6th Nov 2024 at 15:26

reports/PRO1976_S6_MF_9_GCAATTCC-CTCGAACA_L007_R1 (paired) trimmed (paired) RNA-Seq report.pdf

SUSPHIRE - Sustainable Bioproduction of Pheromones for Insect Pest Control in Agriculture

_p_SUSPHIRE/_I_T31_mealybug/_S_P4_Pcitri_genome/_A_01_RNAseq-CLC/

Creator: Marko Petek

Submitter: Marko Petek

Investigations: _I_T31_mealybug

Studies: _S_P4_Pcitri_genome

Assays: _A_01_RNAseq-CLC

Download

Created: 16th May 2022 at 10:49, Last updated: 6th Nov 2024 at 15:26

reports/PRO1976_S7_MF_10_CTCAGAAG-GGCAAGTT_L007_R1 (paired) report.pdf

SUSPHIRE - Sustainable Bioproduction of Pheromones for Insect Pest Control in Agriculture

_p_SUSPHIRE/_I_T31_mealybug/_S_P4_Pcitri_genome/_A_01_RNAseq-CLC/

Creator: Marko Petek

Submitter: Marko Petek

Investigations: _I_T31_mealybug

Studies: _S_P4_Pcitri_genome

Assays: _A_01_RNAseq-CLC

Download

Created: 16th May 2022 at 10:49, Last updated: 6th Nov 2024 at 15:26

reports/PRO1976_S7_MF_10_CTCAGAAG-GGCAAGTT_L007_R1 (paired) trimmed (paired) RNA-Seq report.pdf

SUSPHIRE - Sustainable Bioproduction of Pheromones for Insect Pest Control in Agriculture

_p_SUSPHIRE/_I_T31_mealybug/_S_P4_Pcitri_genome/_A_01_RNAseq-CLC/

Creator: Marko Petek

Submitter: Marko Petek

Investigations: _I_T31_mealybug

Studies: _S_P4_Pcitri_genome

Assays: _A_01_RNAseq-CLC

Download

Created: 16th May 2022 at 10:49, Last updated: 6th Nov 2024 at 15:26

reports/PRO1976_S8_MF_11_GTCCTAAG-AGCTACCA_L007_R1 (paired) report.pdf

SUSPHIRE - Sustainable Bioproduction of Pheromones for Insect Pest Control in Agriculture

_p_SUSPHIRE/_I_T31_mealybug/_S_P4_Pcitri_genome/_A_01_RNAseq-CLC/

Creator: Marko Petek

Submitter: Marko Petek

Investigations: _I_T31_mealybug

Studies: _S_P4_Pcitri_genome

Assays: _A_01_RNAseq-CLC

Download

Created: 16th May 2022 at 10:49, Last updated: 6th Nov 2024 at 15:26

reports/PRO1976_S8_MF_11_GTCCTAAG-AGCTACCA_L007_R1 (paired) trimmed (paired) RNA-Seq report.pdf

SUSPHIRE - Sustainable Bioproduction of Pheromones for Insect Pest Control in Agriculture

_p_SUSPHIRE/_I_T31_mealybug/_S_P4_Pcitri_genome/_A_01_RNAseq-CLC/

Creator: Marko Petek

Submitter: Marko Petek

Investigations: _I_T31_mealybug

Studies: _S_P4_Pcitri_genome

Assays: _A_01_RNAseq-CLC

Download

Created: 16th May 2022 at 10:49, Last updated: 6th Nov 2024 at 15:26

protocols/02Bioinfo_Pos04_RNA-Seq_CLC-limma.docx

SUSPHIRE - Sustainable Bioproduction of Pheromones for Insect Pest Control in Agriculture

_p_SUSPHIRE/_I_T31_mealybug/_S_P4_Pcitri_genome/_A_01_RNAseq-CLC/

Creator: Marko Petek

Submitter: Marko Petek

Investigations: _I_T31_mealybug

Studies: _S_P4_Pcitri_genome

Assays: _A_01_RNAseq-CLC

Download

Created: 16th May 2022 at 10:48, Last updated: 6th Nov 2024 at 15:26

reports/PRO1976_S1_VF_2_GGAAGAGA-CGAGAGAA_L007_R1 (paired) - graphical QC report.pdf

SUSPHIRE - Sustainable Bioproduction of Pheromones for Insect Pest Control in Agriculture

_p_SUSPHIRE/_I_T31_mealybug/_S_P4_Pcitri_genome/_A_01_RNAseq-CLC/

Creator: Marko Petek

Submitter: Marko Petek

Investigations: _I_T31_mealybug

Studies: _S_P4_Pcitri_genome

Assays: _A_01_RNAseq-CLC

Download

Created: 16th May 2022 at 10:48, Last updated: 6th Nov 2024 at 15:26

reports/PRO1976_S1_VF_2_GGAAGAGA-CGAGAGAA_L007_R1 (paired) - supplementary QC report.pdf

SUSPHIRE - Sustainable Bioproduction of Pheromones for Insect Pest Control in Agriculture

_p_SUSPHIRE/_I_T31_mealybug/_S_P4_Pcitri_genome/_A_01_RNAseq-CLC/

Creator: Marko Petek

Submitter: Marko Petek

Investigations: _I_T31_mealybug

Studies: _S_P4_Pcitri_genome

Assays: _A_01_RNAseq-CLC

Download

Created: 16th May 2022 at 10:48, Last updated: 6th Nov 2024 at 15:26

reports/PRO1976_S1_VF_2_GGAAGAGA-CGAGAGAA_L007_R1 (paired) report.pdf

SUSPHIRE - Sustainable Bioproduction of Pheromones for Insect Pest Control in Agriculture

_p_SUSPHIRE/_I_T31_mealybug/_S_P4_Pcitri_genome/_A_01_RNAseq-CLC/

Creator: Marko Petek

Submitter: Marko Petek

Investigations: _I_T31_mealybug

Studies: _S_P4_Pcitri_genome

Assays: _A_01_RNAseq-CLC

Download

Created: 16th May 2022 at 10:48, Last updated: 6th Nov 2024 at 15:26

reports/PRO1976_S1_VF_2_GGAAGAGA-CGAGAGAA_L007_R1 (paired) trimmed (paired) RNA-Seq report.pdf

SUSPHIRE - Sustainable Bioproduction of Pheromones for Insect Pest Control in Agriculture

_p_SUSPHIRE/_I_T31_mealybug/_S_P4_Pcitri_genome/_A_01_RNAseq-CLC/

Creator: Marko Petek

Submitter: Marko Petek

Investigations: _I_T31_mealybug

Studies: _S_P4_Pcitri_genome

Assays: _A_01_RNAseq-CLC

Download

Created: 16th May 2022 at 10:48, Last updated: 6th Nov 2024 at 15:26

reports/PRO1976_S2_VF_3_TCGGATTC-CGCAACTA_L007_R1 (paired) report.pdf

SUSPHIRE - Sustainable Bioproduction of Pheromones for Insect Pest Control in Agriculture

_p_SUSPHIRE/_I_T31_mealybug/_S_P4_Pcitri_genome/_A_01_RNAseq-CLC/

Creator: Marko Petek

Submitter: Marko Petek

Investigations: _I_T31_mealybug

Studies: _S_P4_Pcitri_genome

Assays: _A_01_RNAseq-CLC

Download

Created: 16th May 2022 at 10:48, Last updated: 6th Nov 2024 at 15:26

reports/PRO1976_S2_VF_3_TCGGATTC-CGCAACTA_L007_R1 (paired) trimmed (paired) RNA-Seq report.pdf

SUSPHIRE - Sustainable Bioproduction of Pheromones for Insect Pest Control in Agriculture

_p_SUSPHIRE/_I_T31_mealybug/_S_P4_Pcitri_genome/_A_01_RNAseq-CLC/

Creator: Marko Petek

Submitter: Marko Petek

Investigations: _I_T31_mealybug

Studies: _S_P4_Pcitri_genome

Assays: _A_01_RNAseq-CLC

Download

Created: 16th May 2022 at 10:48, Last updated: 6th Nov 2024 at 15:26

reports/PRO1976_S3_VF_5_CTGTACCA-CACAGACT_L007_R1 (paired) report.pdf

SUSPHIRE - Sustainable Bioproduction of Pheromones for Insect Pest Control in Agriculture

_p_SUSPHIRE/_I_T31_mealybug/_S_P4_Pcitri_genome/_A_01_RNAseq-CLC/

Creator: Marko Petek

Submitter: Marko Petek

Investigations: _I_T31_mealybug

Studies: _S_P4_Pcitri_genome

Assays: _A_01_RNAseq-CLC

Download

Created: 16th May 2022 at 10:48, Last updated: 6th Nov 2024 at 15:26

reports/PRO1976_S3_VF_5_CTGTACCA-CACAGACT_L007_R1 (paired) trimmed (paired) RNA-Seq report.pdf

SUSPHIRE - Sustainable Bioproduction of Pheromones for Insect Pest Control in Agriculture

_p_SUSPHIRE/_I_T31_mealybug/_S_P4_Pcitri_genome/_A_01_RNAseq-CLC/

Creator: Marko Petek

Submitter: Marko Petek

Investigations: _I_T31_mealybug

Studies: _S_P4_Pcitri_genome

Assays: _A_01_RNAseq-CLC

Download

Created: 16th May 2022 at 10:48, Last updated: 6th Nov 2024 at 15:26

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