SOPs

What is a SOP?

48 SOPs visible to you, out of a total of 48

P.ALT-231213-V1_EI-IVBCG_Dose-PAV-TIS

Hi-IMPAcTB

No description specified

Creator: Charles Demurjian

Submitter: Charles Demurjian

Investigations: IMPAcTB

Studies: Humoral correlates of protection against Mycoba...

Assays: Patient Visit - Metadata, Tissue Collection - Metadata

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Created: 19th Dec 2023 at 20:36, Last updated: 1st Mar 2024 at 16:39

P.ALT-230627-V1_ADNP-EI.docx

Hi-IMPAcTB

No description specified

Creator: Charles Demurjian

Submitter: Charles Demurjian

Investigations: IMPAcTB

Studies: Humoral correlates of protection against Mycoba...

Assays: Antibody-Dependent Neutrophil Phagocytosis - Da...

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Created: 19th Dec 2023 at 21:08, Last updated: 1st Mar 2024 at 16:39

P.ALT-230627-V1_ADNKA-EI_IVBCG.docx

Hi-IMPAcTB

No description specified

Creator: Charles Demurjian

Submitter: Charles Demurjian

Investigations: IMPAcTB

Studies: Humoral correlates of protection against Mycoba...

Assays: Antibody-Dependent NK Cell Activation - Data Li...

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Created: 19th Dec 2023 at 21:10, Last updated: 1st Mar 2024 at 16:39

P.ALT-230627-V1_ADCP-EI_IVBCG.docx

Hi-IMPAcTB

No description specified

Creator: Charles Demurjian

Submitter: Charles Demurjian

Investigations: IMPAcTB

Studies: Humoral correlates of protection against Mycoba...

Assays: Antibody-Dependent Cellular Phagocytosis - Data...

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Created: 19th Dec 2023 at 21:11, Last updated: 1st Mar 2024 at 16:39

P.ALT-230627-V1_ABTR-EI_IVBCG.docx

Hi-IMPAcTB

No description specified

Creator: Charles Demurjian

Submitter: Charles Demurjian

Investigations: IMPAcTB

Studies: Humoral correlates of protection against Mycoba...

Assays: Titer Assay - Data Linked

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Created: 19th Dec 2023 at 21:13, Last updated: 1st Mar 2024 at 16:39

P.ALT-230627-V1_FCRB-EI_IVBCG.docx

Hi-IMPAcTB

No description specified

Creator: Charles Demurjian

Submitter: Charles Demurjian

Investigations: IMPAcTB

Studies: Humoral correlates of protection against Mycoba...

Assays: FC Receptor Binding - Data Linked

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Created: 19th Dec 2023 at 21:17, Last updated: 1st Mar 2024 at 16:39

P.ALT-231201-V1_Study_Design-ACS-GC6.docx

Hi-IMPAcTB

No description specified

Creator: Charles Demurjian

Submitter: Charles Demurjian

Investigations: IMPAcTB

Studies: Mycobacterium tuberculosis-specific antibodies ...

Assays: Patient Visit - Metadata, Tissue Collection - Metadata

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Created: 1st Dec 2023 at 21:31, Last updated: 18th Jan 2024 at 19:18

P.ALT-231031-V1_ACS_GC6_FCRB-TITR.docx

Hi-IMPAcTB

No description specified

Creator: Charles Demurjian

Submitter: Charles Demurjian

Investigations: IMPAcTB

Studies: Mycobacterium tuberculosis-specific antibodies ...

Assays: FC Receptor Binding Assay - Data Linked, Titer Assay - Data Linked

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Created: 1st Dec 2023 at 21:32, Last updated: 18th Jan 2024 at 19:18

P.ALT-231031-V1_ACS_ADCP.docx

Hi-IMPAcTB

No description specified

Creator: Charles Demurjian

Submitter: Charles Demurjian

Investigations: IMPAcTB

Studies: Mycobacterium tuberculosis-specific antibodies ...

Assays: Antibody-Dependent Cellular Phagocytosis - Data...

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Created: 1st Dec 2023 at 21:33, Last updated: 18th Jan 2024 at 19:18

P.ALT-231031-V1_ACS_ADNP.docx

Hi-IMPAcTB

No description specified

Creator: Charles Demurjian

Submitter: Charles Demurjian

Investigations: IMPAcTB

Studies: Mycobacterium tuberculosis-specific antibodies ...

Assays: Antibody-Dependent Neutrophil Phagocytosis - Da...

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Created: 1st Dec 2023 at 21:34, Last updated: 18th Jan 2024 at 19:18

P.FOR-230503-V1_Barcoding-Whole-Genome-Sequencing-Protocol.docx

Hi-IMPAcTB

No description specified

Creator: Charles Demurjian

Submitter: Charles Demurjian

Investigations: IMPAcTB

Studies: CD8+ lymphocytes are critical for early control...

Assays: Short Read Sequencing - Data Linked

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Created: 20th Oct 2023 at 15:51, Last updated: 20th Oct 2023 at 19:43

P.FOR-231020-V1_DBMM-Analysis-CD8.docx

Hi-IMPAcTB

No description specified

Creator: Charles Demurjian

Submitter: Charles Demurjian

Investigations: IMPAcTB

Studies: CD8+ lymphocytes are critical for early control...

Assays: Digitally Barcoded Mtb Matrix Analysis - Data A...

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Created: 20th Oct 2023 at 15:53, Last updated: 20th Oct 2023 at 19:43

P.FLY-231011_Patient Visit CD8

Hi-IMPAcTB

No description specified

Creator: Charles Demurjian

Submitter: Charles Demurjian

Investigations: IMPAcTB

Studies: CD8+ lymphocytes are critical for early control...

Assays: Patient Visit - Metadata, Tissue Collection - Metadata

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Created: 11th Oct 2023 at 18:33, Last updated: 12th Oct 2023 at 01:04

P.FOR-231011_Bacterial Extraction

Hi-IMPAcTB

No description specified

Creator: Charles Demurjian

Submitter: Charles Demurjian

Investigations: IMPAcTB

Studies: CD8+ lymphocytes are critical for early control...

Assays: Bacterial Extraction - Metadata

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Created: 11th Oct 2023 at 19:22, Last updated: 12th Oct 2023 at 01:04

P.FOR-230503-V1_Barcoding_Amplicon_Feb2023

Hi-IMPAcTB

No description specified

Creator: Charles Demurjian

Submitter: Charles Demurjian

Investigations: IMPAcTB

Studies: CD8+ lymphocytes are critical for early control...

Assays: DNA Extraction - Metadata, Short Read Sequencing - Data Linked

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Created: 11th Oct 2023 at 19:33, Last updated: 12th Oct 2023 at 01:04

P.FLY-230509-V1_CD8-NX-Protocol

Hi-IMPAcTB

No description specified

Creator: Charles Demurjian

Submitter: Charles Demurjian

Investigations: IMPAcTB

Studies: CD8+ lymphocytes are critical for early control...

Assays: Flow Cytometry - Data Linked

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Created: 12th Oct 2023 at 00:25, Last updated: 12th Oct 2023 at 01:04

P.FLY-230911-V1_IHC-CD8 Depletion

Hi-IMPAcTB

No description specified

Creator: Charles Demurjian

Submitter: Charles Demurjian

Investigations: IMPAcTB

Studies: CD8+ lymphocytes are critical for early control...

Assays: Immunohistochemistry - Data Linked

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Created: 12th Oct 2023 at 00:49, Last updated: 12th Oct 2023 at 01:04

P.FLY-230523-V1_PET_CT_Imaging

Hi-IMPAcTB

No description specified

Creator: Charles Demurjian

Submitter: Charles Demurjian

Investigations: IMPAcTB

Studies: CD8+ lymphocytes are critical for early control...

Assays: PET/CT Scan - Data Linked

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Created: 12th Oct 2023 at 00:54, Last updated: 12th Oct 2023 at 01:04

P.SES-230405-V1_JP_Flow_Protocol.docx

Hi-IMPAcTB

No description specified

Creator: Charles Demurjian

Submitter: Charles Demurjian

Investigations: IMPAcTB

Studies: T cell signatures of bacterial control among M....

Assays: Flow Cytometry - Data Linked

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Created: 17th May 2023 at 20:44, Last updated: 17th May 2023 at 20:47

P.BOO-230324-V1_KC_Protocol

Hi-IMPAcTB

No description specified

Creator: Charles Demurjian

Submitter: Charles Demurjian

Investigations: IMPAcTB

Studies: T cell signatures of bacterial control among M....

Assays: Patient Visit - Metadata, Tissue Collection - Metadata

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Created: 17th May 2023 at 20:46, Last updated: 17th May 2023 at 20:47

P.BOO-230324-V1_KC_Protocol

Hi-IMPAcTB

No description specified

Creator: Charles Demurjian

Submitter: Charles Demurjian

Investigations: IMPAcTB

Studies: Immune cells in bronchoalveolar lavage fluid of...

Assays: Patient Visit – Metadata, Tissue Collection - Metadata

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Created: 27th Mar 2023 at 21:38, Last updated: 30th Mar 2023 at 22:45

P.BOO-230324-V1_2016_Nov_04_Bronchoscopy_Protocol_vers1.0

Hi-IMPAcTB

No description specified

Creator: Charles Demurjian

Submitter: Charles Demurjian

Investigations: IMPAcTB

Studies: Immune cells in bronchoalveolar lavage fluid of...

Assays: Patient Visit – Metadata, Tissue Collection - Metadata

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Created: 27th Mar 2023 at 21:35, Last updated: 30th Mar 2023 at 22:45

P.BOO-230324-V1_2018_June_Bronchoscopy_Protocol_vers2.0

Hi-IMPAcTB

No description specified

Creator: Charles Demurjian

Submitter: Charles Demurjian

Investigations: IMPAcTB

Studies: Immune cells in bronchoalveolar lavage fluid of...

Assays: Patient Visit – Metadata, Tissue Collection - Metadata

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Created: 27th Mar 2023 at 21:37, Last updated: 30th Mar 2023 at 22:45

P.BOO-230324-V1_2019_April_Bronchoscopy_Protocol_vers4.0

Hi-IMPAcTB

No description specified

Creator: Charles Demurjian

Submitter: Charles Demurjian

Investigations: IMPAcTB

Studies: Immune cells in bronchoalveolar lavage fluid of...

Assays: Patient Visit – Metadata, Tissue Collection - Metadata

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Created: 27th Mar 2023 at 21:37, Last updated: 30th Mar 2023 at 22:45

P.BOO-230324-V1_2020_Jan_Bronchoscopy_Protocol_vers4.0

Hi-IMPAcTB

No description specified

Creator: Charles Demurjian

Submitter: Charles Demurjian

Investigations: IMPAcTB

Studies: Immune cells in bronchoalveolar lavage fluid of...

Assays: Patient Visit – Metadata, Tissue Collection - Metadata

Download

Created: 27th Mar 2023 at 21:38, Last updated: 30th Mar 2023 at 22:45

P.FLY-220824-V1_P---Immunohistochemistry-Analysis.docx

Hi-IMPAcTB

No description specified

Creator: Jake Schissel

Submitter: Jake Schissel

Investigations: IMPAcTB

Studies: Multimodal profiling of lung granulomas in maca...

Assays: Immunohistochemistry – Data Linked

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Created: 17th Oct 2022 at 19:00

P.SHA-220824-V1_P---Clustering.docx

Hi-IMPAcTB

No description specified

Creator: Jake Schissel

Submitter: Jake Schissel

Investigations: IMPAcTB

Studies: Multimodal profiling of lung granulomas in maca...

Assays: Single Cell Clustering Analysis – Data Linked

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Created: 17th Oct 2022 at 18:58

P.SHA-220912-V1_Drop-seq_Alignment_Cookbook.pdf

Hi-IMPAcTB

No description specified

Creator: Jake Schissel

Submitter: Jake Schissel

Investigations: IMPAcTB

Studies: CD8+ lymphocytes are critical for early control..., Multimodal profiling of lung granulomas in maca...

Assays: Single Cell Expression Analysis - Data Linked, Single Cell Expression Matrix Analysis – Data L...

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Created: 17th Oct 2022 at 18:56

P.SHA-220819-V1_SeqWellHughes.et.al.Master.Protocol.pdf

Hi-IMPAcTB

No description specified

Creator: Jake Schissel

Submitter: Jake Schissel

Investigations: IMPAcTB

Studies: CD8+ lymphocytes are critical for early control..., Multimodal profiling of lung granulomas in maca...

Assays: DNA Extraction - Metadata, Library Creation – Metadata, Short Read Sequencing - Data Linked, Single Cell Sequencing – Data Linked

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Created: 17th Oct 2022 at 18:38

P.FLY-210708-V1_Hannah's-GentleMacs-Protocol-as-of-Sept-18.docx

Hi-IMPAcTB

No description specified

Creator: Jake Schissel

Submitter: Jake Schissel

Investigations: IMPAcTB

Studies: CD8+ lymphocytes are critical for early control..., Multimodal profiling of lung granulomas in maca...

Assays: Library Creation – Metadata, Tissue Collection - Metadata

Download

Created: 17th Oct 2022 at 18:37

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