Studies

What is a Study?
1 Study visible to you, out of a total of 3

In this study, we developed an automated and reproducible workflow for transcriptomics data analysis using network biology approaches. The analyses are fully automated in R with clusterProfiler and RCy3 to connect to the widely adopted network analysis software Cytoscape including the CyTargetLinker app for network extension. For demonstration, we use a publicly available dataset from Blanco-Melo et al., GSE147507 obtained from GEO. After pre-processing with DESeq2, the dataset contains log2 fold ...

Submitter: Nhung Pham

Investigation: Omics data analysis workflow

Assays: No Assays

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