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output/R_graphs/venn_DEG_logFC1_red-blue.pdf

SUSPHIRE - Sustainable Bioproduction of Pheromones for Insect Pest Control in Agriculture

_p_SUSPHIRE/_I_T21_SXPsysbio/_S_P4_SxP10-oldG-DE/_A_05_DEstat-R/

Creator: Marko Petek

Submitter: Marko Petek

Investigations: _I_T21_SXPsysbio

Studies: _S_P4_SxP10-oldG-DE

Assays: _A_05_DEstat-R

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Created: 11th Apr 2022 at 13:53, Last updated: 21st Sep 2022 at 10:47

output/low_wt/log10filteredcounts_boxplot.pdf

SUSPHIRE - Sustainable Bioproduction of Pheromones for Insect Pest Control in Agriculture

_p_SUSPHIRE/_I_T21_SXPsysbio/_S_P4_SxP10-oldG-DE/_A_05_DEstat-R/

Creator: Marko Petek

Submitter: Marko Petek

Investigations: _I_T21_SXPsysbio

Studies: _S_P4_SxP10-oldG-DE

Assays: _A_05_DEstat-R

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Created: 11th Apr 2022 at 13:43, Last updated: 21st Sep 2022 at 10:47

output/low_wt/log10rawcounts_boxplot.pdf

SUSPHIRE - Sustainable Bioproduction of Pheromones for Insect Pest Control in Agriculture

_p_SUSPHIRE/_I_T21_SXPsysbio/_S_P4_SxP10-oldG-DE/_A_05_DEstat-R/

Creator: Marko Petek

Submitter: Marko Petek

Investigations: _I_T21_SXPsysbio

Studies: _S_P4_SxP10-oldG-DE

Assays: _A_05_DEstat-R

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Created: 11th Apr 2022 at 13:43, Last updated: 21st Sep 2022 at 10:47

output/low_wt/norm_counts_filtered_MDS_dim1_2.pdf

SUSPHIRE - Sustainable Bioproduction of Pheromones for Insect Pest Control in Agriculture

_p_SUSPHIRE/_I_T21_SXPsysbio/_S_P4_SxP10-oldG-DE/_A_05_DEstat-R/

Creator: Marko Petek

Submitter: Marko Petek

Investigations: _I_T21_SXPsysbio

Studies: _S_P4_SxP10-oldG-DE

Assays: _A_05_DEstat-R

Download

Created: 11th Apr 2022 at 13:43, Last updated: 21st Sep 2022 at 10:47

output/low_wt/norm_counts_raw&filtered_densityplots.pdf

SUSPHIRE - Sustainable Bioproduction of Pheromones for Insect Pest Control in Agriculture

_p_SUSPHIRE/_I_T21_SXPsysbio/_S_P4_SxP10-oldG-DE/_A_05_DEstat-R/

Creator: Marko Petek

Submitter: Marko Petek

Investigations: _I_T21_SXPsysbio

Studies: _S_P4_SxP10-oldG-DE

Assays: _A_05_DEstat-R

Download

Created: 11th Apr 2022 at 13:43, Last updated: 21st Sep 2022 at 10:47

output/low_wt/raw_counts_filtered_MDS_dim1_2.pdf

SUSPHIRE - Sustainable Bioproduction of Pheromones for Insect Pest Control in Agriculture

_p_SUSPHIRE/_I_T21_SXPsysbio/_S_P4_SxP10-oldG-DE/_A_05_DEstat-R/

Creator: Marko Petek

Submitter: Marko Petek

Investigations: _I_T21_SXPsysbio

Studies: _S_P4_SxP10-oldG-DE

Assays: _A_05_DEstat-R

Download

Created: 11th Apr 2022 at 13:43, Last updated: 21st Sep 2022 at 10:47

output/low_wt/SIGMA_vs_A_plot.pdf

SUSPHIRE - Sustainable Bioproduction of Pheromones for Insect Pest Control in Agriculture

_p_SUSPHIRE/_I_T21_SXPsysbio/_S_P4_SxP10-oldG-DE/_A_05_DEstat-R/

Creator: Marko Petek

Submitter: Marko Petek

Investigations: _I_T21_SXPsysbio

Studies: _S_P4_SxP10-oldG-DE

Assays: _A_05_DEstat-R

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Created: 11th Apr 2022 at 13:48, Last updated: 21st Sep 2022 at 10:47

output/low_wt/venn_DEG_logFC1.pdf

SUSPHIRE - Sustainable Bioproduction of Pheromones for Insect Pest Control in Agriculture

_p_SUSPHIRE/_I_T21_SXPsysbio/_S_P4_SxP10-oldG-DE/_A_05_DEstat-R/

Creator: Marko Petek

Submitter: Marko Petek

Investigations: _I_T21_SXPsysbio

Studies: _S_P4_SxP10-oldG-DE

Assays: _A_05_DEstat-R

Download

Created: 11th Apr 2022 at 13:49, Last updated: 21st Sep 2022 at 10:47

output/R_graphs/log10filteredcounts_boxplot.pdf

SUSPHIRE - Sustainable Bioproduction of Pheromones for Insect Pest Control in Agriculture

_p_SUSPHIRE/_I_T21_SXPsysbio/_S_P4_SxP10-oldG-DE/_A_05_DEstat-R/

Creator: Marko Petek

Submitter: Marko Petek

Investigations: _I_T21_SXPsysbio

Studies: _S_P4_SxP10-oldG-DE

Assays: _A_05_DEstat-R

Download

Created: 11th Apr 2022 at 13:49, Last updated: 21st Sep 2022 at 10:47

input/README.MD

SUSPHIRE - Sustainable Bioproduction of Pheromones for Insect Pest Control in Agriculture

_p_SUSPHIRE/_I_T21_SXPsysbio/_S_P4_SxP10-oldG-DE/_A_03a_mapping2-STAR/

Creator: Marko Petek

Submitter: Marko Petek

Investigations: _I_T21_SXPsysbio

Studies: _S_P4_SxP10-oldG-DE

Assays: _A_03a_mapping2-STAR

Download

Created: 10th Apr 2022 at 16:19, Last updated: 21st Sep 2022 at 10:47

output/Log.out

SUSPHIRE - Sustainable Bioproduction of Pheromones for Insect Pest Control in Agriculture

_p_SUSPHIRE/_I_T21_SXPsysbio/_S_P4_SxP10-oldG-DE/_A_03a_mapping2-STAR/

Creator: Marko Petek

Submitter: Marko Petek

Investigations: _I_T21_SXPsysbio

Studies: _S_P4_SxP10-oldG-DE

Assays: _A_03a_mapping2-STAR

Download

Created: 10th Apr 2022 at 16:19, Last updated: 21st Sep 2022 at 10:47

input/Mercator_parameters.pptx

SUSPHIRE - Sustainable Bioproduction of Pheromones for Insect Pest Control in Agriculture

_p_SUSPHIRE/_I_T21_SXPsysbio/_S_P4_SxP10-oldG-DE/_A_04_Mercator-bioinfo/

Creator: Marko Petek

Submitter: Marko Petek

Investigations: _I_T21_SXPsysbio

Studies: _S_P4_SxP10-oldG-DE

Assays: _A_04_Mercator-bioinfo

Download

Created: 10th Apr 2022 at 16:21, Last updated: 21st Sep 2022 at 10:47

input/README.MD

SUSPHIRE - Sustainable Bioproduction of Pheromones for Insect Pest Control in Agriculture

_p_SUSPHIRE/_I_T21_SXPsysbio/_S_P4_SxP10-oldG-DE/_A_04_Mercator-bioinfo/

Creator: Marko Petek

Submitter: Marko Petek

Investigations: _I_T21_SXPsysbio

Studies: _S_P4_SxP10-oldG-DE

Assays: _A_04_Mercator-bioinfo

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Created: 10th Apr 2022 at 16:21, Last updated: 21st Sep 2022 at 10:47

output/Mercator53ba038c3cf5008962da2f399f62fd5eResult.zip

SUSPHIRE - Sustainable Bioproduction of Pheromones for Insect Pest Control in Agriculture

_p_SUSPHIRE/_I_T21_SXPsysbio/_S_P4_SxP10-oldG-DE/_A_04_Mercator-bioinfo/

Creator: Marko Petek

Submitter: Marko Petek

Investigations: _I_T21_SXPsysbio

Studies: _S_P4_SxP10-oldG-DE

Assays: _A_04_Mercator-bioinfo

Download

Created: 10th Apr 2022 at 16:22, Last updated: 21st Sep 2022 at 10:47

scripts/R_low-wt.R

SUSPHIRE - Sustainable Bioproduction of Pheromones for Insect Pest Control in Agriculture

_p_SUSPHIRE/_I_T21_SXPsysbio/_S_P4_SxP10-oldG-DE/_A_05_DEstat-R/

Creator: Marko Petek

Submitter: Marko Petek

Investigations: _I_T21_SXPsysbio

Studies: _S_P4_SxP10-oldG-DE

Assays: _A_05_DEstat-R

Download

Created: 10th Apr 2022 at 16:23, Last updated: 21st Sep 2022 at 10:47

scripts/SexyPlant_CLC_RNA-seq.R

SUSPHIRE - Sustainable Bioproduction of Pheromones for Insect Pest Control in Agriculture

_p_SUSPHIRE/_I_T21_SXPsysbio/_S_P4_SxP10-oldG-DE/_A_05_DEstat-R/

Creator: Marko Petek

Submitter: Marko Petek

Investigations: _I_T21_SXPsysbio

Studies: _S_P4_SxP10-oldG-DE

Assays: _A_05_DEstat-R

Download

Created: 10th Apr 2022 at 16:23, Last updated: 21st Sep 2022 at 10:47

reports/CLC_reports.zip

SUSPHIRE - Sustainable Bioproduction of Pheromones for Insect Pest Control in Agriculture

_p_SUSPHIRE/_I_T21_SXPsysbio/_S_P4_SxP10-oldG-DE/_A_03_mapping-CLC/

Creator: Marko Petek

Submitter: Marko Petek

Investigations: _I_T21_SXPsysbio

Studies: _S_P4_SxP10-oldG-DE

Assays: _A_03_mapping-CLC

Download

Created: 11th Apr 2022 at 13:30, Last updated: 21st Sep 2022 at 10:47

output/raw/raw.zip

SUSPHIRE - Sustainable Bioproduction of Pheromones for Insect Pest Control in Agriculture

_p_SUSPHIRE/_I_T21_SXPsysbio/_S_P4_SxP10-oldG-DE/_A_03a_mapping2-STAR/

Creator: Marko Petek

Submitter: Marko Petek

Investigations: _I_T21_SXPsysbio

Studies: _S_P4_SxP10-oldG-DE

Assays: _A_03a_mapping2-STAR

Download

Created: 11th Apr 2022 at 13:43, Last updated: 21st Sep 2022 at 10:47

output/WT5_1_fastqc.html

SUSPHIRE - Sustainable Bioproduction of Pheromones for Insect Pest Control in Agriculture

_p_SUSPHIRE/_I_T21_SXPsysbio/_S_P4_SxP10-oldG-DE/_A_02_FastQC-bioinfo/

Creator: Marko Petek

Submitter: Marko Petek

Investigations: _I_T21_SXPsysbio

Studies: _S_P4_SxP10-oldG-DE

Assays: _A_02_FastQC-bioinfo

Download

Created: 10th Apr 2022 at 15:50, Last updated: 21st Sep 2022 at 10:47

output/WT5_1_fastqc.zip

SUSPHIRE - Sustainable Bioproduction of Pheromones for Insect Pest Control in Agriculture

_p_SUSPHIRE/_I_T21_SXPsysbio/_S_P4_SxP10-oldG-DE/_A_02_FastQC-bioinfo/

Creator: Marko Petek

Submitter: Marko Petek

Investigations: _I_T21_SXPsysbio

Studies: _S_P4_SxP10-oldG-DE

Assays: _A_02_FastQC-bioinfo

Download

Created: 10th Apr 2022 at 15:50, Last updated: 21st Sep 2022 at 10:47

output/WT5_2_fastqc.html

SUSPHIRE - Sustainable Bioproduction of Pheromones for Insect Pest Control in Agriculture

_p_SUSPHIRE/_I_T21_SXPsysbio/_S_P4_SxP10-oldG-DE/_A_02_FastQC-bioinfo/

Creator: Marko Petek

Submitter: Marko Petek

Investigations: _I_T21_SXPsysbio

Studies: _S_P4_SxP10-oldG-DE

Assays: _A_02_FastQC-bioinfo

Download

Created: 10th Apr 2022 at 15:50, Last updated: 21st Sep 2022 at 10:47

output/WT5_2_fastqc.zip

SUSPHIRE - Sustainable Bioproduction of Pheromones for Insect Pest Control in Agriculture

_p_SUSPHIRE/_I_T21_SXPsysbio/_S_P4_SxP10-oldG-DE/_A_02_FastQC-bioinfo/

Creator: Marko Petek

Submitter: Marko Petek

Investigations: _I_T21_SXPsysbio

Studies: _S_P4_SxP10-oldG-DE

Assays: _A_02_FastQC-bioinfo

Download

Created: 10th Apr 2022 at 15:50, Last updated: 21st Sep 2022 at 10:47

reports/multiqc_report.html

SUSPHIRE - Sustainable Bioproduction of Pheromones for Insect Pest Control in Agriculture

_p_SUSPHIRE/_I_T21_SXPsysbio/_S_P4_SxP10-oldG-DE/_A_02_FastQC-bioinfo/

Creator: Marko Petek

Submitter: Marko Petek

Investigations: _I_T21_SXPsysbio

Studies: _S_P4_SxP10-oldG-DE

Assays: _A_02_FastQC-bioinfo

Download

Created: 10th Apr 2022 at 15:50, Last updated: 21st Sep 2022 at 10:47

input/README.MD

SUSPHIRE - Sustainable Bioproduction of Pheromones for Insect Pest Control in Agriculture

_p_SUSPHIRE/_I_T21_SXPsysbio/_S_P4_SxP10-oldG-DE/_A_03_mapping-CLC/

Creator: Marko Petek

Submitter: Marko Petek

Investigations: _I_T21_SXPsysbio

Studies: _S_P4_SxP10-oldG-DE

Assays: _A_03_mapping-CLC

Download

Created: 10th Apr 2022 at 15:50, Last updated: 21st Sep 2022 at 10:47

output/README.MD

SUSPHIRE - Sustainable Bioproduction of Pheromones for Insect Pest Control in Agriculture

_p_SUSPHIRE/_I_T21_SXPsysbio/_S_P4_SxP10-oldG-DE/_A_03_mapping-CLC/

Creator: Marko Petek

Submitter: Marko Petek

Investigations: _I_T21_SXPsysbio

Studies: _S_P4_SxP10-oldG-DE

Assays: _A_03_mapping-CLC

Download

Created: 10th Apr 2022 at 15:51, Last updated: 21st Sep 2022 at 10:47

reports/CLC_report_history.zip

SUSPHIRE - Sustainable Bioproduction of Pheromones for Insect Pest Control in Agriculture

_p_SUSPHIRE/_I_T21_SXPsysbio/_S_P4_SxP10-oldG-DE/_A_03_mapping-CLC/

Creator: Marko Petek

Submitter: Marko Petek

Investigations: _I_T21_SXPsysbio

Studies: _S_P4_SxP10-oldG-DE

Assays: _A_03_mapping-CLC

Download

Created: 11th Apr 2022 at 13:30, Last updated: 21st Sep 2022 at 10:47

output/WT2_1_fastqc.zip

SUSPHIRE - Sustainable Bioproduction of Pheromones for Insect Pest Control in Agriculture

_p_SUSPHIRE/_I_T21_SXPsysbio/_S_P4_SxP10-oldG-DE/_A_02_FastQC-bioinfo/

Creator: Marko Petek

Submitter: Marko Petek

Investigations: _I_T21_SXPsysbio

Studies: _S_P4_SxP10-oldG-DE

Assays: _A_02_FastQC-bioinfo

Download

Created: 10th Apr 2022 at 15:49, Last updated: 21st Sep 2022 at 10:47

output/WT2_2_fastqc.html

SUSPHIRE - Sustainable Bioproduction of Pheromones for Insect Pest Control in Agriculture

_p_SUSPHIRE/_I_T21_SXPsysbio/_S_P4_SxP10-oldG-DE/_A_02_FastQC-bioinfo/

Creator: Marko Petek

Submitter: Marko Petek

Investigations: _I_T21_SXPsysbio

Studies: _S_P4_SxP10-oldG-DE

Assays: _A_02_FastQC-bioinfo

Download

Created: 10th Apr 2022 at 15:49, Last updated: 21st Sep 2022 at 10:47

output/WT2_2_fastqc.zip

SUSPHIRE - Sustainable Bioproduction of Pheromones for Insect Pest Control in Agriculture

_p_SUSPHIRE/_I_T21_SXPsysbio/_S_P4_SxP10-oldG-DE/_A_02_FastQC-bioinfo/

Creator: Marko Petek

Submitter: Marko Petek

Investigations: _I_T21_SXPsysbio

Studies: _S_P4_SxP10-oldG-DE

Assays: _A_02_FastQC-bioinfo

Download

Created: 10th Apr 2022 at 15:49, Last updated: 21st Sep 2022 at 10:47

output/WT3_1_fastqc.html

SUSPHIRE - Sustainable Bioproduction of Pheromones for Insect Pest Control in Agriculture

_p_SUSPHIRE/_I_T21_SXPsysbio/_S_P4_SxP10-oldG-DE/_A_02_FastQC-bioinfo/

Creator: Marko Petek

Submitter: Marko Petek

Investigations: _I_T21_SXPsysbio

Studies: _S_P4_SxP10-oldG-DE

Assays: _A_02_FastQC-bioinfo

Download

Created: 10th Apr 2022 at 15:50, Last updated: 21st Sep 2022 at 10:47

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