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Processed TiMet WP1.1a RNA data, SD

Millar group, TiMet

SD values of clock gene RNA data in absolute units of RNA copies per cell (calculated from copies per gFW, / 25 million cells/gFW) from TiMet WP1.1, RNA dataset ros (from rosettes). Note the Col data are from WP1.1, not substituted with Col from the LD12:12 of the WP1.2 photoperiod data set, as they were in Flis et al. 2015. Note also that cL_m in these data is taken from CCA1 only, not the average of CCA1 and LHY as in the data sets used for optimisation of P2011.2.1 in Flis et al. 2015.

The ...

Creators: Andrew Millar, Uriel Urquiza Garcia

Submitter: Andrew Millar

Investigations: Absolute units in Arabidopsis clock models up t... and 1 hidden item

Studies: Rescaling the P2011 model to match RNA data and 1 hidden item

Assays: TiMet RNA timeseries data and starting models and 1 hidden item

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Created: 6th Dec 2017 at 21:58, Last updated: 29th Jul 2021 at 20:18

Processed TiMet WP1.1a RNA data, mean

Millar group, TiMet, POP - the Parameter Optimisation Problem

Mean values of clock gene RNA data in absolute units of RNA copies per cell (calculated from copies per gFW, / 25 million cells/gFW) from TiMet WP1.1, RNA dataset ros (from rosettes). Note the Col data are from WP1.1, not substituted with Col from the LD12:12 of the WP1.2 photoperiod data set, as they were in Flis et al. 2015. Note also that cL_m in these data is taken from CCA1 only, not the average of CCA1 and LHY as in the data sets used for optimisation of P2011.2.1 in Flis et al. 2015.