Selected Cell
Cell:
Value:
Reactions
Loci
Enzymes
Metabolites
Metabolite-Reactions
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600 | Cofactor biosynthesis | Ubiquinol | CHORPYRLY-RXN | cof_4-hydroxybenzoate-syn_4.1.3.40_CHORPYRLY-RXN | 1 chorismate --> 1 4-hydroxybenzoate + 1 pyruvate | EbN1_C12820 | 4.1.3.40 | ||
601 | Cofactor biosynthesis | Ubiquinol | 4OHBENZOATE-OCTAPRENYLTRANSFER-RXN | cof_ubiquinol-8-syn_2.5.1.39_4OHBENZOATE-OCTAPRENYLTRANSFER-RXN | 1 4-hydroxybenzoate + 1 all-trans-octaprenyl_diphosphate --> 1 diphosphate + 1 3-octaprenyl-4-hydroxybenzoate | EbN1_C12810 | 2.5.1.39 | ||
602 | Cofactor biosynthesis | Ubiquinol | 3-OCTAPRENYL-4-OHBENZOATE-DECARBOX-RXN | cof_ubiquinol-8-syn-(prokaryotic)_4.1.1.98_3-OCTAPRENYL-4-OHBENZOATE-DECARBOX-RXN | 1 3-octaprenyl-4-hydroxybenzoate + 1 H+ --> 1 CO2 + 1 2-octaprenylphenol | EbN1_C12750, EbN1_C17720 | 4.1.1.98 | updated EC number # | |
603 | Cofactor biosynthesis | Ubiquinol | 2-OCTAPRENYL-6-OHPHENOL-METHY-RXN | cof_ubiquinol-8-syn-(prokaryotic)_2.1.1.222_2-OCTAPRENYL-6-OHPHENOL-METHY-RXN | 1 2-octaprenyl-6-hydroxyphenol + 1 S-adenosyl-L-methionine --> 1 H+ + 1 S-adenosyl-L-homocysteine + 1 2-octaprenyl-6-methoxyphenol | EbN1_C05070, EbN1_C24500 | 2.1.1.222 | ||
604 | Cofactor biosynthesis | Ubiquinol | 2-OCTAPRENYL-6-METHOXYPHENOL-HYDROX-RXN | cof_ubiquinol-8-syn_1.14.13.-_2-OCTAPRENYL-6-METHOXYPHENOL-HYDROX-RXN | 1 NADPH + 1 O2 + 1 H+ + 1 2-octaprenyl-6-methoxyphenol --> 1 H2O + 1 NADP+ + 1 2-octaprenyl-6-methoxyquinol | EbN1_C06160 | 1.14.13.- | ||
605 | Cofactor biosynthesis | Ubiquinol | 2-OCTAPRENYL-METHOXY-BENZOQ-METH-RXN | cof_ubiquinol-8-syn_2.1.1.201_2-OCTAPRENYL-METHOXY-BENZOQ-METH-RXN | 1 S-adenosyl-L-methionine + 1 2-octaprenyl-6-methoxyquinol --> 1 2-octaprenyl-3-methyl-6-methoxyquinol + 1 H+ + 1 S-adenosyl-L-homocysteine | EbN1_C17150 | 2.1.1.201 | ||
606 | Cofactor biosynthesis | Ubiquinol | OCTAPRENYL-METHYL-METHOXY-BENZOQ-OH-RXN | cof_ubiquinol-8-syn_1.14.99.60_OCTAPRENYL-METHYL-METHOXY-BENZOQ-OH-RXN | 1 2-octaprenyl-3-methyl-6-methoxyquinol + 1 O2 + 1 NADPH + 1 H+ --> 1 H2O + 1 NADP+ + 1 3-demethylubiquinol-8 | EbN1_C05150 | 1.14.99.60 | ||
607 | Cofactor biosynthesis | Ubiquinol | DHHB-METHYLTRANSFER-RXN | cof_ubiquinol-8-syn_2.1.1.64_DHHB-METHYLTRANSFER-RXN | 1 S-adenosyl-L-methionine + 1 3-demethylubiquinol-8 --> 1 H+ + 1 ubiquinol-8 + 1 S-adenosyl-L-homocysteine | EbN1_C05070 | 2.1.1.64 | ||
608 | Cofactor biosynthesis | Ubiquinol | 2-OCTAPRENYLPHENOL-HYDROX-RXN | cof_ubiquinol-8-syn-(anaerobic)_1.14.13.-_2-OCTAPRENYLPHENOL-HYDROX-RXN | 1 2-octaprenylphenol + 1 NAD+ + 1 H2O --> 1 2-octaprenyl-6-hydroxyphenol + 1 H+ + 1 NADH | EbN1_C06160 | 1.14.13.- | ||
609 | Cofactor biosynthesis | Ubiquinol | 2-OCTAPRENYLPHENOL-HYDROX-RXN | cof_ubiquinol-8-syn-(prokaryotic)_1.14.13.240_2-OCTAPRENYLPHENOL-HYDROX-RXN | 1 2-octaprenylphenol + 1 NADPH + 1 O2 + 1 H+ --> 1 2-octaprenyl-6-hydroxyphenol + 1 H2O + 1 NADP+ | EbN1_C23420 | 1.14.13.240 | ||
610 | Cofactor biosynthesis | Ubiquinol | 2-OCTAPRENYL-6-METHOXYPHENOL-HYDROX-RXN | cof_ubiquinol-8-syn-(anaerobic)_1.14.13.-_2-OCTAPRENYL-6-METHOXYPHENOL-HYDROX-RXN | 1 NAD+ + 1 H2O + 1 2-octaprenyl-6-methoxyphenol --> 1 H+ + 1 NADH + 1 2-octaprenyl-6-methoxyquinol | EbN1_C06160 | 1.14.13.- | ||
611 | Cofactor biosynthesis | Ubiquinol | OCTAPRENYL-METHYL-METHOXY-BENZOQ-OH-RXN | cof_ubiquinol-8-syn-(anaerobic)_1.14.99.60_OCTAPRENYL-METHYL-METHOXY-BENZOQ-OH-RXN | 1 2-octaprenyl-3-methyl-6-methoxyquinol + 1 NAD+ + 1 H2O --> 1 H+ + 1 NADH + 1 3-demethylubiquinol-8 | EbN1_C05150 | 1.14.99.60 | ||
612 | Cofactor biosynthesis | Thiamin diphosphate | PYRIMSYN1-RXN | cof_4-amino-2-methyl-5-diphosphomethylpyrimidine-syn_4.1.99.17_PYRIMSYN1-RXN | 1 5-amino-1-(5-phospho-beta-D-ribosyl)imidazole + 1 S-adenosyl-L-methionine --> 1 formate + 1 L-methionine + 3 H+ + 1 5'-deoxyadenosine + 1 carbon_monoxide + 1 4-amino-2-methyl-5-phosphomethylpyrimidine | EbN1_C09400 | 4.1.99.17 | ||
613 | Cofactor biosynthesis | Thiamin diphosphate | PYRIMSYN3-RXN | cof_4-amino-2-methyl-5-diphosphomethylpyrimidine-syn_2.7.4.7_PYRIMSYN3-RXN | 1 ATP + 1 4-amino-2-methyl-5-phosphomethylpyrimidine --> 1 4-amino-2-methyl-5-diphosphomethylpyrimidine + 1 ADP | EbN1_C09390 | 2.7.4.7 | ||
614 | Cofactor biosynthesis | Thiamin diphosphate | RXN0-308 | cof_thiazole-syn_2.8.1.7_RXN0-308 | 1 L-Cysteine-Desulfurase + 1 L-cysteine --> 1 S-sulfanyl-[IscS] + 1 L-alanine | EbN1_C37040, EbN1_C37050, EbN1_C36810 | 2.8.1.7 | modified # | |
615 | Cofactor biosynthesis | Thiamin diphosphate | RXN-9789 | cof_thiazole-syn_2.7.7.73_RXN-9789 | 1 [sulfur-carrier_protein_ThiS] + 1 ATP --> 1 Adenylated-[sulfur-carrier_protein_ThiS] + 1 diphosphate | EbN1_C13880 | 2.7.7.73 | ||
616 | Cofactor biosynthesis | Thiamin diphosphate | RXN-14382 | cof_thiazole-syn_2.8.1.7_RXN-14382 | 1 S-sulfanyl-[IscS] + 1 Sulfur-Carrier-Proteins-ThiI <=> 1 ThiI-S-sulfanylcysteine + 1 L-Cysteine-Desulfurase | EbN1_C37040, EbN1_C37050, EbN1_C36810 | 2.8.1.7 | modified # | |
617 | Cofactor biosynthesis | Thiamin diphosphate | RXN-9788 | cof_thiazole-syn_2.8.1.-_RXN-9788 | 1 Adenylated-[sulfur-carrier_protein_ThiS] + 1 ThiI-S-sulfanylcysteine --> 1 Sulfur-Carrier-Proteins-ThiI + 1 AMP + 1 Thiocarboxyadenylated-[sulfur-carrier_protein_ThiS] | EbN1_C37050, EbN1_C36810 | 2.8.1.- | ||
618 | Cofactor biosynthesis | Thiamin diphosphate | BR50098 | cof_thiazole-syn_spontaneous_BR50098 | 1 H+ + 1 2-iminoacetate + 1 H2O <=> 1 glyoxylate + 1 ammonium | spontaneous | |||
619 | Cofactor biosynthesis | Thiamin diphosphate | THIAZOLSYN2-RXN | cof_thiazole-syn_2.8.1.10_THIAZOLSYN2-RXN | 1 2-iminoacetate + 1 Thiocarboxyadenylated-[sulfur-carrier_protein_ThiS] + 1 1-deoxy-D-xylulose_5-phosphate --> 2 H2O + 1 2-[(2R,5Z)-2-carboxy-4-methylthiazol-5(2H)-ylidene]ethyl_phosphate + 1 [sulfur-carrier_protein_ThiS] | EbN1_C13100 | 2.8.1.10 | ||
620 | Cofactor biosynthesis | Thiamin diphosphate | RXN-12611 | cof_thiamin-diphosphate-syn_2.5.1.3_RXN-12611 | 1 2-[(2R,5Z)-2-carboxy-4-methylthiazol-5(2H)-ylidene]ethyl_phosphate + 2 H+ + 1 4-amino-2-methyl-5-diphosphomethylpyrimidine --> 1 diphosphate + 1 thiamin_phosphate + 1 CO2 | EbN1_C23460, EbN1_C09580 | 2.5.1.3 | ||
621 | Cofactor biosynthesis | Thiamin diphosphate | THI-P-KIN-RXN | cof_thiamin-diphosphate-syn_thiamin-salvage_2.7.4.16_THI-P-KIN-RXN | 1 ATP + 1 thiamin_phosphate --> 1 thiamin_diphosphate + 1 ADP | EbN1_C19390 | 2.7.4.16 | ||
622 | Cofactor biosynthesis | Tetrapyrrole | RXN-9386 | cof_tetrapyrrole-syn-tRNA-charging_6.1.1.17_RXN-9386 | ATP + L-glutamate + tRNAGlu <=> AMP + diphosphate + L-glutamyl-tRNAGlu | EbN1_C39580 | 6.1.1.17 | ||
623 | Cofactor biosynthesis | Tetrapyrrole | 6.3.5.7-RXN | cof_tetrapyrrole-syn-tRNA-charging_6.3.5.7-RXN | ATP + L-glutamyl-tRNAGln + L-glutamine + H2O <=> ADP + phosphate + L-glutaminyl-tRNAGln + L-glutamate | EbN1_C17230 | |||
624 | Cofactor biosynthesis | Tetrapyrrole | GLUTRNAREDUCT-RXN | cof_tetrapyrrole-syn_1.2.1.70_GLUTRNAREDUCT-RXN | 1 L-glutamyl-tRNAGlu + 1 NADPH --> 1 glutamate-1-semialdehyde + 1 tRNAGlu + 1 NADP+ | EbN1_C06340 | 1.2.1.70 | ||
625 | Cofactor biosynthesis | Tetrapyrrole | GSAAMINOTRANS-RXN | cof_tetrapyrrole-syn_5.4.3.8_GSAAMINOTRANS-RXN | 1 glutamate-1-semialdehyde --> 1 5-amino-levulinate | EbN1_C09570 | 5.4.3.8 | ||
626 | Cofactor biosynthesis | Tetrapyrrole | PORPHOBILSYNTH-RXN | cof_tetrapyrrole-syn_4.2.1.24_PORPHOBILSYNTH-RXN | 2 5-amino-levulinate --> 1 porphobilinogen + 2 H2O + 1 H+ | EbN1_C05770 | 4.2.1.24 | ||
627 | Cofactor biosynthesis | Tetrapyrrole | OHMETHYLBILANESYN-RXN | cof_tetrapyrrole-syn_2.5.1.61_OHMETHYLBILANESYN-RXN | 4 porphobilinogen + 1 H2O --> 1 hydroxymethylbilane + 4 ammonium | EbN1_C06240 | 2.5.1.61 | ||
628 | Cofactor biosynthesis | Tetrapyrrole | UROGENIIISYN-RXN | cof_tetrapyrrole-syn_4.2.1.75_UROGENIIISYN-RXN | 1 hydroxymethylbilane --> 1 H2O + 1 uroporphyrinogen-III | EbN1_C06230 | 4.2.1.75 | ||
629 | Cofactor biosynthesis | Heme b | UROGENDECARBOX-RXN | cof_heme-b-syn_4.1.1.37_UROGENDECARBOX-RXN | 1 uroporphyrinogen-III + 4 H+ --> 1 coproporphyrinogen-III + 4 CO2 | EbN1_C15980 | 4.1.1.37 | ||
630 | Cofactor biosynthesis | Heme b | HEMN-RXN | cof_heme-b-syn_1.3.98.3_HEMN-RXN | 1 coproporphyrinogen-III + 2 S-adenosyl-L-methionine --> 2 L-methionine + 2 5'-deoxyadenosine + 1 protoporphyrinogen-IX + 2 CO2 | EbN1_C29580 | 1.3.98.3 | ||
631 | Cofactor biosynthesis | Heme b | RXN0-1461 | cof_heme-b-syn_1.3.3.3_RXN0-1461 | 1 O2 + 2 H+ + 1 coproporphyrinogen-III --> 1 protoporphyrinogen-IX + 2 H2O + 2 CO2 | EbN1_C06200 | 1.3.3.3 | ||
632 | Cofactor biosynthesis | Heme b | BS436556 | cof_heme-b-syn_1.3.3.3_BS436556 | 2 protoporphyrinogen-IX + 3 O2 <=> 2 protoporphyrin_IX + 6 H2O | EbN1_C06200 | 1.3.3.3 | ||
633 | Cofactor biosynthesis | Heme b | PROTOHEMEFERROCHELAT-RXN | cof_heme-b-syn_4.99.1.1_PROTOHEMEFERROCHELAT-RXN | 1 protoporphyrin_IX + 1 Fe2+ --> 2 H+ + 1 protoheme_IX | EbN1_C27440 | 4.99.1.1 | ||
634 | Cofactor biosynthesis | Heme b | BS427516 | cof_heme-b-syn_2.5.1.141_BS427516 | 1 protoheme_IX + 1 (2E,6E)-farnesyl_diphosphate + 1 H2O <=> 1 ferroheme_O + 1 diphosphate | EbN1_C24190 | 2.5.1.141 | ||
635 | Cofactor biosynthesis | Cobalamin (incomplete) | UROPORIIIMETHYLTRANSA-RXN | cof_adenosylcobalamin-syn_2.1.1.107_UROPORIIIMETHYLTRANSA-RXN | 1 S-adenosyl-L-methionine + 1 uroporphyrinogen-III <=> 1 H+ + 1 precorrin-1 + 1 S-adenosyl-L-homocysteine | EbN1_C23050, EbN1_C04850, EbN1_C06220 | 2.1.1.107 | ||
636 | Cofactor biosynthesis | Cobalamin (incomplete) | UROPORIIIMETHYLTRANSA-RXN2 | cof_adenosylcobalamin-syn_2.1.1.107_UROPORIIIMETHYLTRANSA-RXN2 | 1 S-adenosyl-L-methionine + 1 precorrin-1 <=> 1 H+ + 1 precorrin-2 + 1 S-adenosyl-L-homocysteine | EbN1_C23050, EbN1_C04850, EbN1_C06220 | 2.1.1.107 | ||
637 | Cofactor biosynthesis | Cobalamin (incomplete) | RXN-8769 | cof_adenosylcobalamin-syn_6.3.5.11_RXN-8769 | 2 L-glutamine + 2 ATP + 1 cobyrinate + 2 H2O --> 2 H+ + 2 L-glutamate + 2 phosphate + 2 ADP + 1 cob(II)yrinate_a,c-diamide | EbN1_C23060 | 6.3.5.11 | ||
638 | Cofactor biosynthesis | Cobalamin (incomplete) | BR48015 | cof_adenosylcobalamin-syn_6.6.1.2_BR48015 | 1 hydrogenobyrinate_a,c-diamide + 1 Co2+ + 1 ATP + 1 H2O <=> 1 H+ + 1 cob(II)yrinate_a,c-diamide + 1 ADP + 1 phosphate | EbN1_PI00580 | 6.6.1.2 | ||
639 | Cofactor biosynthesis | Cobalamin (incomplete) | R344-RXN | cof_adenosylcobalamin-syn_2.5.1.17_R344-RXN | 2 ATP + 2 cob(II)yrinate_a,c-diamide + 1 a_reduced_flavoprotein --> 2 triphosphate + 2 adenosyl-cobyrinate_a,c-diamide + 1 an_oxidized_flavoprotein | EbN1_C23040, EbN1_C05480 | 2.5.1.17 | ||
640 | Cofactor biosynthesis | Cobalamin (incomplete) | R345-RXN | cof_adenosylcobalamin-syn_6.3.5.10_R345-RXN | 4 H2O + 4 ATP + 1 adenosyl-cobyrinate_a,c-diamide + 4 L-glutamine --> 1 adenosylcobyrate + 4 phosphate + 4 H+ + 4 ADP + 4 L-glutamate | EbN1_C21000 | 6.3.5.10 | ||
641 | Cofactor biosynthesis | Cobalamin (incomplete) | 4.1.1.81-RXN | cof_adenosylcobalamin-syn_4.1.1.81_4.1.1.81-RXN | 1 L-threonine_3-O-phosphate + 1 H+ --> 1 CO2 + 1 (R)-1-amino-2-propanol_O-2-phosphate | EbN1_C11990 | 4.1.1.81 | ||
642 | Cofactor biosynthesis | Cobalamin (incomplete) | RXN-6261 | cof_adenosylcobalamin-syn_6.3.1.10_RXN-6261 | 1 adenosylcobyrate + 1 ATP + 1 (R)-1-amino-2-propanol_O-2-phosphate --> 1 phosphate + 1 H+ + 1 adenosyl-cobinamide_phosphate + 1 ADP | EbN1_C29820, EbN1_C12000 | 6.3.1.10 | ||
643 | Cofactor biosynthesis | Cobalamin (incomplete) | COBINPGUANYLYLTRANS-RXN | cof_adenosylcobalamin-syn_2.7.7.62_COBINPGUANYLYLTRANS-RXN | 1 adenosyl-cobinamide_phosphate + 1 GTP + 1 H+ <=> 1 adenosylcobinamide-GDP + 1 diphosphate | EbN1_C22990 | 2.7.7.62 | ||
644 | Cofactor biosynthesis | Cobalamin (incomplete) | RXN-8771 | cof_adenosylcobalamin-syn_1.13.11.79_RXN-8771 | 1 FMNH2 + 1 O2 --> 1 5,6-dimethylbenzimidazole + 1 D-erythrose_4-phosphate + 1 dialurate | EbN1_C23080 | 1.13.11.79 | ||
645 | Cofactor biosynthesis | Cobalamin (incomplete) | DMBPPRIBOSYLTRANS-RXN | cof_adenosylcobalamin-syn_2.4.2.21_DMBPPRIBOSYLTRANS-RXN | 1 5,6-dimethylbenzimidazole + 1 beta-nicotinate_D-ribonucleotide --> 1 nicotinate + 1 H+ + 1 alpha-ribazole_5'-phosphate | EbN1_C22980 | 2.4.2.21 | ||
646 | Cofactor biosynthesis | Cobalamin (incomplete) | COBALAMIN5PSYN-RXN | cof_adenosylcobalamin-syn_2.7.8.26_COBALAMIN5PSYN-RXN | 1 adenosylcobinamide-GDP + 1 alpha-ribazole --> 1 GMP + 1 H+ + 1 adenosylcobalamin | EbN1_C22950 | 2.7.8.26 | ||
647 | Cofactor biosynthesis | 8-amino-7-oxononanoate | RXN-11475 | cof_8-amino-7-oxononanoate-syn_2.1.1.197_RXN-11475 | 1 malonyl-[acyl-carrier_protein] + 1 S-adenosyl-L-methionine --> 1 S-adenosyl-L-homocysteine + 1 malonyl-[acyl-carrier_protein]-methyl-ester | EbN1_C34710, EbN1_C05750 | 2.1.1.197 | ||
648 | Cofactor biosynthesis | 8-amino-7-oxononanoate | RXN-11474 | cof_8-amino-7-oxononanoate-syn_2.3.1.179_2.3.1.41_RXN-11474 | 1 malonyl-[acyl-carrier_protein] + 1 H+ + 1 malonyl-[acyl-carrier_protein]-methyl-ester --> 1 holo-[acyl-carrier_protein] + 1 CO2 + 1 3-ketoglutaryl-[acyl-carrier_protein]-methyl-ester | EbN1_C31400 | 2.3.1.41, 2.3.1.179 | ||
649 | Cofactor biosynthesis | 8-amino-7-oxononanoate | RXN-11476 | cof_8-amino-7-oxononanoate-syn_1.1.1.100_RXN-11476 | 1 NADPH + 1 H+ + 1 3-ketoglutaryl-[acyl-carrier_protein]-methyl-ester --> 1 NADP+ + 1 3-hydroxyglutaryl-[acyl-carrier_protein]-methyl-ester | EbN1_C30430, EbN1_C40580, EbN1_PII01600, EbN1_C03780, EbN1_C31380 | 1.1.1.100 | ||
650 | Cofactor biosynthesis | 8-amino-7-oxononanoate | RXN-11477 | cof_8-amino-7-oxononanoate-syn_4.2.1.59_RXN-11477 | 1 3-hydroxyglutaryl-[acyl-carrier_protein]-methyl-ester --> 1 H2O + 1 enoylglutaryl-[acyl-carrier_protein]-methyl-ester | EbN1_C40570, EbN1_C34640 | 4.2.1.59 | ||
651 | Cofactor biosynthesis | 8-amino-7-oxononanoate | RXN-11478 | cof_8-amino-7-oxononanoate-syn_1.3.1.9_RXN-11478 | 1 NADH + 1 H+ + 1 enoylglutaryl-[acyl-carrier_protein]-methyl-ester --> 1 NAD+ + 1 glutaryl-[acyl-carrier_protein]-methyl-ester | EbN1_C38480 | 1.3.1.9 | ||
652 | Cofactor biosynthesis | 8-amino-7-oxononanoate | RXN-11479 | cof_8-amino-7-oxononanoate-syn_2.3.1.179_2.3.1.41_RXN-11479 | 1 malonyl-[acyl-carrier_protein] + 1 H+ + 1 glutaryl-[acyl-carrier_protein]-methyl-ester --> 1 holo-[acyl-carrier_protein] + 1 CO2 + 1 3-ketopimeloyl-[acyl-carrier_protein]-methyl-ester | EbN1_C31400 | 2.3.1.41, 2.3.1.179 | ||
653 | Cofactor biosynthesis | 8-amino-7-oxononanoate | RXN-11480 | cof_8-amino-7-oxononanoate-syn_1.1.1.100_RXN-11480 | 1 H+ + 1 3-ketopimeloyl-[acyl-carrier_protein]-methyl-ester + 1 NADPH --> 1 3-hydroxypimeloyl-[acyl-carrier_protein]-methyl-ester + 1 NADP+ | EbN1_C30430, EbN1_C40580, EbN1_PII01600, EbN1_C03780, EbN1_C31380 | 1.1.1.100 | ||
654 | Cofactor biosynthesis | 8-amino-7-oxononanoate | RXN-11481 | cof_8-amino-7-oxononanoate-syn_4.2.1.59_RXN-11481 | 1 3-hydroxypimeloyl-[acyl-carrier_protein]-methyl-ester --> 1 H2O + 1 enoylpimeloyl-[acyl-carrier_protein]-methyl-ester | EbN1_C40570, EbN1_C34640 | 4.2.1.59 | ||
655 | Cofactor biosynthesis | 8-amino-7-oxononanoate | RXN-11482 | cof_8-amino-7-oxononanoate-syn_1.3.1.9_RXN-11482 | 1 enoylpimeloyl-[acyl-carrier_protein]-methyl-ester + 1 H+ + 1 NADH --> 1 NAD+ + 1 pimeloyl-[acyl-carrier_protein]-methyl-ester | EbN1_C38480 | 1.3.1.9 | ||
656 | Cofactor biosynthesis | 8-amino-7-oxononanoate | RXN-11483 | cof_8-amino-7-oxononanoate-syn_3.1.1.85_RXN-11483 | 1 pimeloyl-[acyl-carrier_protein]-methyl-ester + 1 H2O --> 1 pimeloyl-[acyl-carrier_protein] + 1 H+ + 1 methanol | EbN1_C34720 | 3.1.1.85 | ||
657 | Cofactor biosynthesis | 8-amino-7-oxononanoate | RXN-11484 | cof_8-amino-7-oxononanoate-syn_2.3.1.47_RXN-11484 | 1 L-alanine + 1 H+ + 1 pimeloyl-[acyl-carrier_protein] --> 1 holo-[acyl-carrier_protein] + 1 CO2 + 1 8-amino-7-oxononanoate | EbN1_C34730 | 2.3.1.47 | ||
658 | Cofactor biosynthesis | 8-amino-7-oxononanoate | 7KAPSYN-RXN | cof_8-amino-7-oxononanoate-syn_2.3.1.47_7KAPSYN-RXN | 1 pimeloyl-CoA + 1 L-alanine + 1 H+ --> 1 CO2 + 1 CoA + 1 8-amino-7-oxononanoate | EbN1_C34730 | 2.3.1.47 | ||
659 | Cofactor biosynthesis | 8-amino-7-oxononanoate | RXN-11322 | cof_B6_4.3.3.6_RXN-11322 | 1 D-glyceraldehyde_3-phosphate + 1 L-glutamine + 1 D-ribose_5-phosphate --> 1 L-glutamate + 1 phosphate + 1 pyridoxal_5'-phosphate + 3 H2O | 4.3.3.6 | # | ||
660 | Cofactor biosynthesis | Biotin | DAPASYN-RXN | cof_biotin-syn_2.6.1.62_DAPASYN-RXN | 1 S-adenosyl-L-methionine + 1 8-amino-7-oxononanoate <=> 1 S-adenosyl-4-methylthio-2-oxobutanoate + 1 7,8-diaminopelargonate | EbN1_C34740 | 2.6.1.62 | ||
661 | Cofactor biosynthesis | Biotin | DETHIOBIOTIN-SYN-RXN | cof_biotin-syn_6.3.3.3_DETHIOBIOTIN-SYN-RXN | 1 CO2 + 1 ATP + 1 7,8-diaminopelargonate --> 1 dethiobiotin + 1 phosphate + 1 ADP + 3 H+ | EbN1_C34700 | 6.3.3.3 | ||
662 | Cofactor biosynthesis | Biotin | BS360047 | cof_biotin-syn_2.8.1.6_BS360047 | 1 dethiobiotin + 1 hydrogen_sulfide + 2 S-adenosyl-L-methionine + 2 reduced_ferredoxin <=> 1 biotin + 2 L-methionine + 2 5'-deoxyadenosine + 2 oxidized_ferredoxin | EbN1_C05740 | 2.8.1.6 | ||
663 | Cofactor biosynthesis | Biotin | BIOTINLIG-RXN | cof_biotin-BCCP-assembly_6.3.4.15_BIOTINLIG-RXN | 1 biotin + 1 BCCP-monomer + 1 ATP --> 1 AMP + 1 diphosphate + 1 BCCP-biotin-monomer | EbN1_C23520 | 6.3.4.15 | ||
664 | Cofactor biosynthesis | Molybopterin | RXN-11361 | cof_molybdenum-cofactor-syn_2.7.7.80_RXN-11361 | 1 ATP + 1 [MPT-Synthases] --> 1 carboxyadenylated-[MPT-synthases] + 1 diphosphate | EbN1_C05620 | 2.7.7.80 | ||
665 | Cofactor biosynthesis | Molybopterin | RXN-12473 | cof_molybdenum-cofactor-syn_2.8.1.7_RXN-12473 | 1 carboxyadenylated-[MPT-synthases] + 1 [IscS]-S-sulfanyl-L-cysteine + 1 NADPH --> 1 thiocarboxylated-[MPT-synthases] + 1 [IscS]-L-cysteine + 1 AMP + 1 NADP+ + 1 H+ | EbN1_C37040, EbN1_C37050, EbN1_C36810 | 2.8.1.7 | ||
666 | Cofactor biosynthesis | Molybopterin | RXN0-308 | cof_molybdenum-cofactor-syn_2.8.1.7_RXN0-308 | 1 L-cysteine + 1 [IscS]-L-cysteine <=> 1 L-alanine + 1 [IscS]-S-sulfanyl-L-cysteine | EbN1_C37040, EbN1_C37050, EbN1_C36810 | 2.8.1.7 | modified # | |
667 | Cofactor biosynthesis | Molybopterin | RXN-8340 | cof_molybdenum-cofactor-syn_4.1.99.22_RXN-8340 | 1 GTP + 1 S-adenosyl-L-methionine + 1 NADPH --> 1 (8S)-3',8-cyclo-7,8-dihydroguanosine_5'-triphosphate + 1 5'-deoxyadenosine + 1 L-methionine + 1 NADP+ | EbN1_C31180 | 4.1.99.22 | ||
668 | Cofactor biosynthesis | Molybopterin | BR427248 | cof_molybdenum-cofactor-syn_4.6.1.17_BR427248 | 1 (8S)-3',8-cyclo-7,8-dihydroguanosine_5'-triphosphate --> 1 cyclic_pyranopterin_phosphate + 1 diphosphate | EbN1_C41210 | 4.6.1.17 | ||
669 | Cofactor biosynthesis | Molybopterin | RXN-8342 | cof_molybdenum-cofactor-syn_2.8.1.12_RXN-8342 | 1 cyclic_pyranopterin_phosphate + 2 thiocarboxylated-[MPT-synthases] + 1 H2O --> 2 [MPT-Synthases] + 1 molybdopterin | EbN1_C38550, EbN1_C38540 | 2.8.1.12 | ||
670 | Cofactor biosynthesis | Molybopterin | RXN-8344 | cof_molybdenum-cofactor-syn_2.7.7.75_RXN-8344 | 1 ATP + 1 molybdopterin + 1 H+ --> 1 molybdopterin_adenine_dinucleotide + 1 diphosphate | EbN1_C05510 | 2.7.7.75 | ||
671 | Cofactor biosynthesis | Molybopterin | tungsten-cofactor | cof_tungsten-cofactor | 1 molybdopterin_adenine_dinucleotide + 1 tungstate + 1 molybdopterin + 2 H+ --> 1 bis_tungstenpterin_cofactor + 1 H2O + 1 AMP | ||||
672 | Cofactor biosynthesis | Molybopterin | RXN-8348 | cof_molybdenum-cofactor-syn_2.10.1.1_RXN-8348 | 1 molybdate + 1 molybdopterin_adenine_dinucleotide + 1 H+ --> 1 AMP + 1 H2O + 1 molybdenum_cofactor | EbN1_C05800, EbN1_C38560 | 2.10.1.1 | ||
673 | Cofactor biosynthesis | Molybopterin | RXN0-262 | cof_guanylyl-molybdenum-cofactor-syn_2.7.7.77_RXN0-262 | 1 molybdenum_cofactor + 1 GTP + 3 H+ <=> 1 guanylyl_molybdenum_cofactor + 1 diphosphate | EbN1_C16720 | 2.7.7.77 | ||
674 | Cofactor biosynthesis | Molybopterin | RXN0-6254 | cof_guanylyl-molybdenum-cofactor-syn_2.7.7.76_RXN0-6254 | 1 molybdenum_cofactor + 1 CTP + 1 H+ <=> 1 cytidylylmolybdenum_cofactor + 1 diphosphate | EbN1_C11700 | 2.7.7.76 | ||
675 | Cofactor biosynthesis | Molybopterin | RXN-21548 | cof_guanylyl-molybdenum-cofactor-syn_2.8.1.7_RXN-21548 | 1 cytidylylmolybdenum_cofactor + 1 L-cysteine + 1 NADH <=> 1 sulfurylated_cytidylylmolybdenum_cofactor + 1 L-alanine + 1 NAD+ | EbN1_C37040, EbN1_C37050, EbN1_C36810 | 2.8.1.7 | ||
676 | Cofactor biosynthesis | F420 | RXN-8079 | cof_factor-420-syn_2.5.1.147_RXN-8079 | 1 S-adenosyl-L-methionine + 1 5-amino-6-(D-ribitylamino)uracil + 1 L-tyrosine --> 1 5-amino-5-(4-hydroxybenzyl)-6-(D-ribitylimino)-5,6-dihydrouracil + 1 2-iminoacetate + 1 5'-deoxyadenosine + 1 L-methionine + 2 H+ | EbN1_PII01700 | 2.5.1.147 | ||
677 | Cofactor biosynthesis | F420 | BR53119 | cof_factor-420-syn_2.7.7.105_BR53119 | 1 phosphoenolpyruvate + 1 GTP + 1 H+ <=> 1 enolpyruvoyl-2-diphospho-5'-guanosine + 1 diphosphate | EbN1_PII01660 | 2.7.7.105 | ||
678 | Cofactor biosynthesis | F420 | RXN-8078 | cof_factor-420-syn_2.7.8.28_RXN-8078 | 1 7,8-didemethyl-8-hydroxy-5-deazariboflavin + 1 enolpyruvoyl-2-diphospho-5'-guanosine --> 1 GMP + 1 H+ + 1 coenzyme_F420-0 | EbN1_PII01670 | 2.7.8.28 | ||
679 | Cofactor biosynthesis | F420 | 4.3.1.32 | cof_factor-420-syn_4.3.1.32 | 1 S-adenosyl-L-methionine + 1 5-amino-5-(4-hydroxybenzyl)-6-(D-ribitylimino)-5,6-dihydrouracil --> 1 7,8-didemethyl-8-hydroxy-5-deazariboflavin + 1 5'-deoxyadenosine + 1 L-methionine + 1 ammonium + 1 H+ | EbN1_PII01700 | 4.3.1.32 | ||
680 | Cofactor biosynthesis | F420 | RXN-8080 | cof_factor-420-polyglutamylation_6.3.2.31_RXN-8080 | 1 coenzyme_F420-0 + 1 L-glutamate + 1 GTP --> 1 GDP + 1 H+ + 1 phosphate + 1 coenzyme_F420-1 | EbN1_PII01680 | 6.3.2.31 | ||
681 | Cofactor biosynthesis | F420 | RXN-8081 | cof_factor-420-polyglutamylation_6.3.2.34_RXN-8081 | 1 GTP + 1 coenzyme_F420-1 + 1 L-glutamate --> 1 GDP + 1 coenzyme_F420 + 1 H+ + 1 phosphate | EbN1_PII01680 | 6.3.2.34 | ||
682 | Cofactor biosynthesis | preQ0 | RXN0-5507 | cof_preQ0-syn_4.1.2.50_RXN0-5507 | 1 7,8-dihydroneopterin_triphosphate + 1 H2O --> 1 acetaldehyde + 1 6-carboxy-5,6,7,8-tetrahydropterin + 1 triphosphate + 2 H+ | EbN1_C03430 | 4.1.2.50 | ||
683 | Cofactor biosynthesis | preQ0 | RXN0-6575 | cof_preQ0-syn_4.3.99.3_RXN0-6575 | 1 H+ + 1 6-carboxy-5,6,7,8-tetrahydropterin --> 1 7-carboxy-7-deazaguanine + 1 ammonium | EbN1_C15080 | 4.3.99.3 | ||
684 | Cofactor biosynthesis | preQ0 | RXN-12093 | cof_preQ0-syn_6.3.4.20_RXN-12093 | 1 ammonium + 1 ATP + 1 7-carboxy-7-deazaguanine --> 1 H2O + 1 ADP + 1 H+ + 1 preQ0 + 1 phosphate | EbN1_C15090 | 6.3.4.20 | ||
685 | Cofactor biosynthesis | preQ0 | ORNDECARBOX-RXN | polyamine_putrescine_4.1.1.17,4.1.1.19_ORNDECARBOX-RXN | 1 H+ + 1 L-ornithine --> 1 CO2 + 1 putrescine | EbN1_C25270 | 4.1.1.19 | ||
686 | Cofactor biosynthesis | involved in multiple pathways | BR29280 | Methanol_1.1.1.1_BR29280 | 1 methanol + 1 NAD+ <=> 1 H+ + 1 formaldehyde + 1 NADH | EbN1_PII01610, EbN1_C17640, EbN1_C26430 | 1.1.1.1 | an alcohol dehydrogenase, e.g. | |
687 | Catabolism | Acetate metabolism | ACETATEKIN-RXN | acetate-metabolism_2.7.2.1_ACETATEKIN-RXN | 1 acetate + 1 ATP --> 1 ADP + 1 acetyl_phosphate | EbN1_C28610, EbN1_C12540 | 2.7.2.1 | ||
688 | Catabolism | Acetate metabolism | 6.2.1.13 | acetate-metabolism_6.2.1.13 | 1 acetate + 1 ATP + 1 CoA --> 1 acetyl-CoA + 1 ADP + 1 phosphate | 6.2.1.13 | |||
689 | Catabolism | Acetate metabolism | PHOSACETYLTRANS-RXN | acetate-metabolism_2.3.1.8_PHOSACETYLTRANS-RXN | 1 acetyl-CoA + 1 phosphate <=> 1 acetyl_phosphate + 1 CoA | EbN1_C12530 | 2.3.1.8 | ||
690 | Catabolism | Acetate metabolism | BS189125 | acetate-metabolism_1.2.1.3_BS189125 | 1 acetaldehyde + 1 H2O + 1 NAD+ <=> 1 acetate + 1 NADH + 1 H+ | EbN1_C28750, EbN1_C28730, EbN1_C12500, EbN1_C17640, EbN1_C28740 | 1.2.1.3 | ||
691 | Catabolism | Acetate metabolism | ACETATE=COA-LIGASE-RXN | acetate-metabolism_6.2.1.1_ACETATE=COA-LIGASE-RXN | 1 acetate + 1 ATP + 1 CoA --> 1 AMP + 1 diphosphate + 1 acetyl-CoA | EbN1_C00960, EbN1_C26860 | 6.2.1.1 | ||
692 | Catabolism | Phenylalanine (anaerobic & aerobic) | 2.6.1.57 | Phe-degradation_Pat_2.6.1.57 | 1 L-phenylalanine + 1 2-oxoglutarate --> 1 phenylpyruvate + 1 L-glutamate | EbN1_C03170 | 2.6.1.57 | ||
693 | Catabolism | Phenylalanine (anaerobic & aerobic) | 4.1.1.74 | Phe-degradation_Pdc_4.1.1.74 | 1 phenylpyruvate --> 1 phenylacetaldehyde + 1 CO2 | EbN1_C37840 | 4.1.1.74 | ||
694 | Catabolism | Phenylalanine (anaerobic & aerobic) | 1.2.7.5 | Phe-degradation_AorABC_1.2.7.5 | 1 phenylacetaldehyde + 2 oxidized_ferredoxin + 1 H2O --> 1 phenylacetate + 2 reduced_ferredoxin + 1 H+ | EbN1_C30730 | 1.2.7.5 | ||
695 | Catabolism | Phenylalanine (anaerobic & aerobic) | 6.2.1.30 | Phe-degradation_PadJ/PaaK1_6.2.1.30 | 1 phenylacetate + 1 ATP + 1 CoA --> 1 phenylacetyl-CoA + 1 AMP + 1 diphosphate | EbN1_C31000, EbN1_C20170, EbN1_C13340, EbN1_C32930 | 6.2.1.30 | ||
696 | Catabolism | Phenylalanine (anaerobic & aerobic) | 1.2.1.39 | Phe-degradation_Pat_1.2.1.39 | 1 phenylacetaldehyde + 1 NADP+ + 1 H2O <=> 1 phenylacetate + 1 NADPH + 1 H+ | EbN1_C28460 | 1.2.1.39 | ||
697 | Catabolism | Phenylalanine (anaerobic & aerobic) | 1.2.7.8 | Phe-degradation-(anaerobic)_lorBA_1.2.7.8 | 1 phenylpyruvate + 2 oxidized_ferredoxin + 1 CoA --> 1 phenylacetyl-CoA + 2 reduced_ferredoxin + 1 CO2 | EbN1_C00660, EbN1_C00650 | 1.2.7.8 | ||
698 | Catabolism | Phenylacetyl-CoA (anaerobic) | RXN-10819 | PheAc-degradation-(anaerobic)_PadJ_6.2.1.30_RXN-10819 | 1 ATP + 1 phenylacetate + 1 CoA --> 1 AMP + 1 phenylacetyl-CoA + 1 diphosphate | EbN1_C31000, EbN1_C20170, EbN1_C13340, EbN1_C32930 | 6.2.1.30 | ||
699 | Catabolism | Phenylacetyl-CoA (anaerobic) | PHENACEOX-RXN | PheAc-degradation-(anaerobic)-PadBCD_1.17.5.1_PHENACEOX-RXN | 1 phenylacetyl-CoA + 2 ubiquinone-8 + 1 H2O --> 2 H+ + 1 phenylglyoxylyl-CoA + 2 ubiquinol-8 | EbN1_C30940, EbN1_C30930, EbN1_C30920 | 1.17.5.1 |
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Reaction ID | Locus tag | ||||||||
73 | EbN1_C07370 | ||||||||
74 | EbN1_C12150 | ||||||||
75 | EbN1_C07370 | ||||||||
76 | EbN1_C28710 | ||||||||
77 | EbN1_C37950 | ||||||||
78 | EbN1_C17840 | ||||||||
79 | EbN1_C02880 | ||||||||
80 | EbN1_C09560 | ||||||||
81 | EbN1_C25740 | ||||||||
82 | EbN1_C23320 | ||||||||
83 | EbN1_C25910 | ||||||||
84 | EbN1_C36380 | ||||||||
85 | EbN1_C32810 | ||||||||
86 | EbN1_C28490 | ||||||||
87 | EbN1_C20100 | ||||||||
89 | EbN1_C40720 | ||||||||
90 | EbN1_C28650 | ||||||||
91 | EbN1_C28650 | ||||||||
92 | EbN1_C30500 | ||||||||
93 | EbN1_C25680 | ||||||||
94 | EbN1_C23780 | ||||||||
94 | EbN1_C23770 | ||||||||
94 | EbN1_C25220 | ||||||||
95 | EbN1_C23780 | ||||||||
95 | EbN1_C23770 | ||||||||
95 | EbN1_C25220 | ||||||||
96 | EbN1_C23780 | ||||||||
96 | EbN1_C23770 | ||||||||
96 | EbN1_C25220 | ||||||||
97 | EbN1_C23780 | ||||||||
97 | EbN1_C23770 | ||||||||
97 | EbN1_C25220 | ||||||||
98 | EbN1_PII00560 | ||||||||
99 | EbN1_PII00560 | ||||||||
100 | EbN1_C05540 | ||||||||
100 | EbN1_C05560 | ||||||||
100 | EbN1_C05550 | ||||||||
101 | EbN1_C10760 | ||||||||
102 | EbN1_C15830 | ||||||||
103 | EbN1_C15830 | ||||||||
104 | EbN1_C08820 | ||||||||
105 | EbN1_C28700 | ||||||||
106 | EbN1_C28090 | ||||||||
106 | EbN1_C11820 | ||||||||
107 | EbN1_C12170 | ||||||||
107 | EbN1_C29600 | ||||||||
107 | EbN1_C29410 | ||||||||
108 | EbN1_C23700 | ||||||||
109 | EbN1_C27620 | ||||||||
110 | EbN1_C35880 | ||||||||
111 | EbN1_C28800 | ||||||||
112 | EbN1_C19970 | ||||||||
113 | EbN1_C23020 | ||||||||
113 | EbN1_C20990 | ||||||||
114 | EbN1_C15390 | ||||||||
115 | EbN1_C25810 | ||||||||
116 | EbN1_C26080 | ||||||||
117 | EbN1_C26080 | ||||||||
118 | EbN1_C37390 | ||||||||
118 | EbN1_C32530 | ||||||||
119 | EbN1_C30460 | ||||||||
119 | EbN1_C30450 | ||||||||
119 | EbN1_C30470 | ||||||||
120 | EbN1_C30460 | ||||||||
120 | EbN1_C30450 | ||||||||
120 | EbN1_C30470 | ||||||||
121 | EbN1_C30460 | ||||||||
121 | EbN1_C30470 | ||||||||
122 | EbN1_C29750 | ||||||||
123 | EbN1_C11610 | ||||||||
124 | EbN1_C20250 | ||||||||
124 | EbN1_C20270 | ||||||||
125 | EbN1_C20250 | ||||||||
125 | EbN1_C20260 | ||||||||
126 | EbN1_C03820 | ||||||||
126 | EbN1_C03810 | ||||||||
128 | EbN1_C03820 | ||||||||
128 | EbN1_C03810 | ||||||||
129 | EbN1_C03820 | ||||||||
129 | EbN1_C03810 | ||||||||
130 | EbN1_C03820 | ||||||||
130 | EbN1_C03810 | ||||||||
132 | EbN1_C37950 | ||||||||
133 | EbN1_C37950 | ||||||||
134 | EbN1_C25910 | ||||||||
136 | EbN1_C11610 | ||||||||
138 | EbN1_C11610 | ||||||||
140 | EbN1_C11610 | ||||||||
141 | EbN1_C25910 | ||||||||
142 | EbN1_C11610 | ||||||||
144 | EbN1_C06580 | ||||||||
145 | EbN1_C36370 | ||||||||
146 | EbN1_C25910 | ||||||||
147 | EbN1_C15990 | ||||||||
148 | EbN1_C31980 | ||||||||
148 | EbN1_C15530 | ||||||||
148 | EbN1_C15540 | ||||||||
149 | EbN1_C02950 | ||||||||
149 | EbN1_C02940 |
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Reaction ID | EC number | ||||||||
104 | 7.-.2.- | ||||||||
105 | 7.3.2.7 | ||||||||
106 | 7.2.2.7 | ||||||||
107 | 7.2.2.8 | ||||||||
108 | 7.2.2.10 | ||||||||
109 | 7.3.2.1 | ||||||||
110 | 7.3.2.3 | ||||||||
111 | 7.3.2.6 | ||||||||
112 | 7.6.2.5 | ||||||||
113 | 7.6.2.- | ||||||||
114 | 7.3.2.5 | ||||||||
116 | 7.4.2.1 | ||||||||
117 | 7.4.2.1 | ||||||||
118 | 7.4.2.10 | ||||||||
152 | 2.7.1.2 | ||||||||
153 | 5.3.1.9 | ||||||||
154 | 5.3.1.9 | ||||||||
155 | 5.3.1.9 | ||||||||
156 | 5.4.2.2 | ||||||||
157 | 2.7.1.90 | ||||||||
158 | 4.1.2.13 | ||||||||
159 | 5.3.1.1 | ||||||||
160 | 1.2.1.12 | ||||||||
161 | 2.7.2.3 | ||||||||
162 | 5.4.2.11 | ||||||||
163 | 4.2.1.11 | ||||||||
164 | 2.7.1.40 | ||||||||
165 | 2.3.1.12 | ||||||||
165 | 1.2.4.1 | ||||||||
165 | 1.8.1.4 | ||||||||
165 | 1.2.5.1 | ||||||||
166 | 3.1.3.11 | ||||||||
167 | 2.7.9.2 | ||||||||
168 | 1.1.1.40 | ||||||||
169 | 4.1.1.32 | ||||||||
170 | 2.3.3.1 | ||||||||
171 | 4.2.1.3 | ||||||||
172 | 1.1.1.42 | ||||||||
173 | 1.2.7.3 | ||||||||
174 | 1.2.1.105 | ||||||||
174 | 2.3.1.61 | ||||||||
174 | 1.8.1.4 | ||||||||
174 | 1.2.4.2 | ||||||||
175 | 6.2.1.5 | ||||||||
176 | 1.3.5.1 | ||||||||
177 | 4.2.1.2 | ||||||||
178 | 1.1.1.37 | ||||||||
179 | 4.1.3.1 | ||||||||
180 | 2.3.3.9 | ||||||||
181 | 4.1.1.31 | ||||||||
182 | 6.4.1.1 | ||||||||
183 | 5.1.3.1 | ||||||||
184 | 5.3.1.6 | ||||||||
185 | 2.2.1.1 | ||||||||
186 | 2.2.1.1 | ||||||||
187 | 2.2.1.2 | ||||||||
188 | 2.7.6.1 | ||||||||
189 | 1.7.5.1 | ||||||||
190 | 1.7.2.1 | ||||||||
191 | 1.7.2.5 | ||||||||
192 | 1.7.2.4 | ||||||||
193 | 7.1.1.2 | ||||||||
194 | 1.6.5.2 | ||||||||
195 | 7.1.1.8 | ||||||||
196 | 7.1.1.9 | ||||||||
197 | 7.1.2.2 | ||||||||
198 | 4.2.1.1 | ||||||||
200 | 1.17.1.9 | ||||||||
201 | 3.6.1.1 | ||||||||
202 | 3.6.1.11 | ||||||||
204 | 1.8.1.4 | ||||||||
205 | 1.11.1.5 | ||||||||
206 | 1.8.1.9 | ||||||||
207 | 1.5.5.1 | ||||||||
212 | 6.3.2.2 | ||||||||
213 | 6.3.2.3 | ||||||||
215 | 1.1.1.284 | ||||||||
216 | 3.1.2.12 | ||||||||
217 | 3.4.11.1 | ||||||||
217 | 3.4.11.10 | ||||||||
218 | 3.4.19.13 | ||||||||
219 | 2.7.7.4 | ||||||||
220 | 1.8.4.10 | ||||||||
221 | 1.8.1.2 | ||||||||
222 | 1.5.1.3 | ||||||||
225 | 1.5.1.5 | ||||||||
226 | 3.5.4.9 | ||||||||
227 | 1.5.1.3 | ||||||||
228 | 2.7.1.30 | ||||||||
229 | 1.1.5.3 | ||||||||
230 | 2.7.1.165 | ||||||||
231 | 1.1.1.36 | ||||||||
233 | 1.4.1.4 | ||||||||
234 | 1.4.1.2 | ||||||||
235 | 6.3.1.2 | ||||||||
236 | 1.4.1.13 | ||||||||
237 | 2.6.1.57 | ||||||||
238 | 6.3.5.4 | ||||||||
239 | 3.5.1.1 |
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Metabolite | Formula | Mol. mass | BRENDA | MetaCyc | KEGG | ||||
L-phenylalanine | C9H11O2N1 | 165.192 | 98 | PHE | C00079 | ||||
L-tyrosine | C9H11O3N1 | 181.191 | 103 | TYR | C00082 | ||||
L-lysine | C6H14O2N2 | 146.19 | 128 | LYS | C00047 | ||||
L-isoleucine | C6H13O2N1 | 131.175 | 266 | ILE | C00407 | ||||
L-arginine | C6H14O2N4 | 174.204 | 117 | ARG | C00062 | ||||
L-threonine | C4H9O3N1 | 119.12 | 220 | D-THREONINE | C00188 | ||||
L-tryptophan | C11H12O2N2 | 204.229 | 113 | TRP | C00078 | ||||
L-aspartate | C4H7O4N1 | 133.103 | 91 | L-ASPARTATE | C00049 | ||||
L-glutamine | C5H10O3N2 | 146.146 | 96 | GLN | C00064 | ||||
L-valine | C5H11O2N1 | 117.148 | 217 | VAL | C00183 | ||||
L-histidine | C6H9O2N3 | 155.157 | 296 | HIS | C00135 | ||||
L-asparagine | C4H8O3N2 | 132.119 | 231 | ASN | C00152 | ||||
L-leucine | C6H13O2N1 | 131.175 | 121 | LEU | C00123 | ||||
glycine | C2H5O2N1 | 75.067 | 68 | GLY | C00037 | ||||
L-cysteine | C3H7O2S1N1 | 121.154 | 70 | CYS | C00736 | ||||
L-alanine | C3H7O2N1 | 89.094 | 97 | 5-AMINO-LEVULINATE | C01401 | ||||
L-methionine | C5H11O2S1N1 | 149.208 | 83 | MET | C00073 | ||||
L-proline | C5H9O2N1 | 115.132 | 215 | PRO | C00148 | ||||
L-serine | C3H7O3N1 | 105.093 | 89 | Serines | C00716 | ||||
L-glutamate | C5H9O4N1 | 147.13 | 38 | GLT | C00302 | ||||
O-antigen | O-Antigens | ||||||||
dATP | C10H16P3O12N5 | 491.183 | 133 | DATP | C00131 | ||||
dGTP | C10H16P3O13N5 | 507.182 | 194 | DGTP | C00286 | ||||
dTTP | C10H17P3O14N2 | 482.168 | 137 | TTP | C00459 | ||||
dCTP | C9H16P3O13N3 | 467.157 | 161 | DCTP | C00458 | ||||
phosphatidylglycerol | C14H25P1O10R2 | 384.318 | 550 | C00344 | |||||
cardiolipin | C25H42P2O17R4 | 676.542 | 652 | CARDIOLIPIN | C05980 | ||||
phosphatidylethanolamine | C13H24P1O8N1R2 | 353.308 | 427 | L-1-GLYCEROPHOSPHORYLETHANOL-AMINE | C00350 | ||||
a_peptidoglycan_with_D,D_cross-links_(meso-diaminopimelate_containing) | |||||||||
CTP | C9H16P3O14N3 | 483.156 | 56 | CTP | C00063 | ||||
GTP | C10H16P3O14N5 | 523.181 | 35 | GTP | C00044 | ||||
ATP | C10H16P3O13N5 | 507.182 | 7 | ATP | C00002 | ||||
UTP | C9H15P3O15N2 | 484.14 | 61 | UTP | C00075 | ||||
pyridoxal_5'-phosphate | C8H11O3N1 | 169.18 | 30 | PYRIDOXINE | C00018 | ||||
riboflavin | C17H20O6N4 | 376.369 | 298 | RIBOFLAVIN | C00255 | ||||
guanylyl_molybdenum_cofactor | C20H26P2O15Mo1S2N10 | 868.501 | 4166 | CPD-582 | C19871 | ||||
ubiquinol-8 | C49H76O4 | 729.143 | 5168 | CPD-9956 | |||||
CoA | C21H36P3O16S1N7 | 767.534 | 10 | CO-A | C00010 | ||||
succinyl-CoA | C25H40P3O19S1N7 | 867.607 | 198 | SUC-COA | C00091 | ||||
molybdate | O4Mo1 | 159.946 | 424 | CPD-3 | C06232 | ||||
5-methyl-tetrahydrofolate | C20H25O6N7 | 459.463 | 1036 | 5-METHYL-THF | C00440 | ||||
acetyl-CoA | C23H38P3O17S1N7 | 809.571 | 27 | ACETYL-COA | C00024 | ||||
10-formyl-tetrahydrofolate | C20H23O7N7 | 473.446 | 445 | 10-FORMYL-DIHYDROFOLATE-GLU-N | C00234 | ||||
putrescine | C4H12N2 | 88.154 | 144 | PUTRESCINE | C00134 | ||||
S-adenosyl-L-methionine | C15H22O5S1N6 | 398.438 | 22 | S-ADENOSYLMETHIONINE | C00019 | ||||
cytidylylmolybdenum_cofactor | |||||||||
chorismate | C10H10O6 | 226.184 | 182 | CHORISMATE | C00251 | ||||
glutathione | C10H17O6S1N3 | 307.321 | 41 | GLUTATHIONE | C02471 | ||||
NADPH | C21H30P3O17N7 | 745.425 | 5 | NADH-P-OR-NOP | C00005 | ||||
malonyl-CoA | C24H38P3O19S1N7 | 853.58 | 72 | MALONYL-COA | C00083 | ||||
NAD+ | C21H29P3O17N7 | 744.417 | 4 | NAD-P-OR-NOP | C00003 | ||||
thiamin_diphosphate | C10H16P2O11N2 | 402.189 | 85 | TDP | C00363 | ||||
NADH | C21H29P2O14N7 | 665.446 | 3 | NADH | C00004 | ||||
tetrahydrofolate | C19H23O6N7 | 445.436 | 184 | THF | C03541 | ||||
3-demethylubiquinol-8 | C48H74O4 | 715.116 | 113388 | OCTAPRENYL-METHYL-OH-METHOXY-BENZQ | C05815 | ||||
NADP+ | C21H29P3O17N7 | 744.417 | 4 | NAD-P-OR-NOP | C00003 | ||||
adenosylcobalamin | C72H102P1Co1O17N18 | 1581.62 | 476 | ADENOSYLCOBALAMIN | C00194 | ||||
di-trans,octa-cis-undecaprenyl_diphosphate | C55H92P2O7 | 927.282 | 2308 | CPD-9649 | C04574 | ||||
uroporphyrinogen-III | C40H44O16N4 | 836.804 | 1736 | UROPORPHYRINOGEN-III | C02469 | ||||
FAD | C27H33P2O15N9 | 785.557 | 14 | FAD | C00016 | ||||
5,10-methylenetetrahydrofolate | C20H23O6N7 | 457.447 | 336 | METHYLENE-THF-GLU-N | C00143 | ||||
H+ | H1 | 1.008 | 2 | PROTON | C00080 | ||||
H2O | H2O1 | 18.015 | 1 | WATER | C00001 | ||||
phosphate | C17H29P1O13R2 | 472.38 | 12 | L-1-phosphatidyl-inositols | C01194 | ||||
ADP | C3H5P1O5 | 152.042 | 8 | 3-HYDROHYDROXYPHOSPHORYLPYRUVATE | C06368 | ||||
NH3 | H3N1 | 17.031 | 16 | AMMONIA | C00014 | ||||
Fe2+ | Fe1 | 55.845 | 23 | Cytochromes-C550-Red | C14818 | ||||
Mg2+ | Mg1 | 24.305 | 25 | MG+2 | C00305 | ||||
Co2+ | Co1 | 58.933 | 21 | CO+2 | C00175 | ||||
F- | H1F1 | 20.006 | 158 | F- | C00742 | ||||
Cl- | H1Cl1 | 36.458 | 134 | CL- | C00698 | ||||
Zn2+ | Zn1 | 65.38 | 19 | ZN+2 | |||||
3-(4-hydroxyphenyl)propanoate | C9H10O3 | 166.176 | 3766 | PHLORETATE | C01744 | ||||
benzoate | C7H1O2R5 | 117.083 | 271 | Aromatic-Acid | C00539 | ||||
nitrate | N1O3 | 62.004 | 263 | NITRATE | C00244 | ||||
nitrite | H1N1O2 | 47.013 | 155 | NITRITE | C00088 | ||||
potassium | K1 | 39.098 | 37 | K+ | |||||
acetate | C2H4O2 | 60.052 | 44 | ACET | C00033 | ||||
4-ethylphenol | C8H10O1 | 122.167 | 2360 | CPD-10596 | C13637 | ||||
4-hydroxybenzoate | C7H6O3 | 138.122 | 311 | 4-hydroxybenzoate | C00156 | ||||
sulfate | H2O4S1 | 98.072 | 148 | SULFATE | C00059 | ||||
heme | C34H34O4N4Fe1 | 618.515 | 45 | CPD-11675 | C00032 | ||||
phenylacetate | C8H8O2 | 136.15 | 624 | PHENYLACETATE | C00548 | ||||
phthalate | C8H6O4 | 166.132 | 2060 | PHTHALATE | C01606 | ||||
cyclohexanecarboxylate | C7H12O2 | 128.171 | 21317 | CPD-575 | C09822 | ||||
benzylamine | C7H9N1 | 107.156 | 441 | BENZYLAMINE | C15562 | ||||
(indol-3-yl)acetate | C10H9O2N1 | 175.187 | 2122 | INDOLE_ACETATE_AUXIN | C00954 | ||||
benzaldehyde | C7H1O1R5 | 101.084 | 138 | Aryl-Aldehyde | C00193 | ||||
4-cresol | C8H10O2 | 138.166 | 1237 | CPD-108 | C01468 | ||||
phenol | C7H8O1 | 108.14 | 219 | BENZYL-ALCOHOL | C00556 | ||||
toluene | C7H8 | 92.141 | 1011 | TOLUENE | C01455 | ||||
ethylbenzene | C8H10 | 106.168 | 2326 | ETHYLBENZENE | C07111 | ||||
3-hydroxybenzoate | C7H6O3 | 138.122 | 768 | 3-HYDROXYBENZOATE | C00587 | ||||
succinate | C4H6O4 | 118.088 | 54 | Alpha-omega-dicarboxylates | C04025 | ||||
3-phenylpropanoate | C9H10O2 | 150.177 | 2450 | 3-PHENYLPROPIONATE | C05629 | ||||
S-adenosyl-L-homocysteine | C14H20O5S1N6 | 384.411 | 34 | ADENOSYL-HOMO-CYS | C00021 | ||||
(S)-malate | C4H6O5 | 134.087 | 180 | MAL | C00149 | ||||
fumarate | C4H4O4 | 116.072 | 156 | FUM | C00122 | ||||
2-oxoglutarate | C5H6O5 | 146.098 | 32 | 2-KETOGLUTARATE | C00026 |
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Metabolite | Reaction-ID | ||||||||
L-phenylalanine | 1 | ||||||||
L-phenylalanine | 36 | ||||||||
L-phenylalanine | 124 | ||||||||
L-phenylalanine | 305 | ||||||||
L-phenylalanine | 692 | ||||||||
L-tyrosine | 1 | ||||||||
L-tyrosine | 307 | ||||||||
L-tyrosine | 676 | ||||||||
L-lysine | 1 | ||||||||
L-lysine | 281 | ||||||||
L-isoleucine | 1 | ||||||||
L-isoleucine | 294 | ||||||||
L-arginine | 1 | ||||||||
L-arginine | 257 | ||||||||
L-threonine | 1 | ||||||||
L-threonine | 77 | ||||||||
L-threonine | 274 | ||||||||
L-threonine | 290 | ||||||||
L-tryptophan | 1 | ||||||||
L-tryptophan | 312 | ||||||||
L-aspartate | 1 | ||||||||
L-aspartate | 54 | ||||||||
L-aspartate | 97 | ||||||||
L-aspartate | 117 | ||||||||
L-aspartate | 237 | ||||||||
L-aspartate | 238 | ||||||||
L-aspartate | 239 | ||||||||
L-aspartate | 256 | ||||||||
L-aspartate | 266 | ||||||||
L-aspartate | 346 | ||||||||
L-aspartate | 350 | ||||||||
L-aspartate | 386 | ||||||||
L-aspartate | 562 | ||||||||
L-aspartate | 574 | ||||||||
L-aspartate | 575 | ||||||||
L-glutamine | 1 | ||||||||
L-glutamine | 235 | ||||||||
L-glutamine | 236 | ||||||||
L-glutamine | 238 | ||||||||
L-glutamine | 249 | ||||||||
L-glutamine | 308 | ||||||||
L-glutamine | 317 | ||||||||
L-glutamine | 339 | ||||||||
L-glutamine | 342 | ||||||||
L-glutamine | 354 | ||||||||
L-glutamine | 394 | ||||||||
L-glutamine | 482 | ||||||||
L-glutamine | 591 | ||||||||
L-glutamine | 623 | ||||||||
L-glutamine | 637 | ||||||||
L-glutamine | 640 | ||||||||
L-glutamine | 659 | ||||||||
L-valine | 1 | ||||||||
L-valine | 285 | ||||||||
L-histidine | 1 | ||||||||
L-histidine | 322 | ||||||||
L-histidine | 328 | ||||||||
L-asparagine | 1 | ||||||||
L-asparagine | 238 | ||||||||
L-asparagine | 239 | ||||||||
L-leucine | 1 | ||||||||
L-leucine | 289 | ||||||||
glycine | 1 | ||||||||
glycine | 213 | ||||||||
glycine | 217 | ||||||||
glycine | 261 | ||||||||
glycine | 263 | ||||||||
glycine | 340 | ||||||||
L-cysteine | 1 | ||||||||
L-cysteine | 212 | ||||||||
L-cysteine | 217 | ||||||||
L-cysteine | 265 | ||||||||
L-cysteine | 570 | ||||||||
L-cysteine | 614 | ||||||||
L-cysteine | 666 | ||||||||
L-cysteine | 675 | ||||||||
L-alanine | 1 | ||||||||
L-alanine | 22 | ||||||||
L-alanine | 134 | ||||||||
L-alanine | 240 | ||||||||
L-alanine | 241 | ||||||||
L-alanine | 242 | ||||||||
L-alanine | 538 | ||||||||
L-alanine | 614 | ||||||||
L-alanine | 657 | ||||||||
L-alanine | 658 | ||||||||
L-alanine | 666 | ||||||||
L-alanine | 675 | ||||||||
L-methionine | 1 | ||||||||
L-methionine | 275 | ||||||||
L-methionine | 563 | ||||||||
L-methionine | 612 | ||||||||
L-methionine | 630 | ||||||||
L-methionine | 662 | ||||||||
L-methionine | 667 | ||||||||
L-methionine | 676 | ||||||||
L-methionine | 679 | ||||||||
L-proline | 1 | ||||||||
L-proline | 23 |