Assays

1 Assay visible to you, out of a total of 1

SUSPHIRE - Sustainable Bioproduction of Pheromones for Insect Pest Control in Agriculture

Short Name: 02_cDNAcupcake-dry Assay Class: DRY Assay Type: dry Title: cDNA cupcake pipeline analysis of P. citri IsoSeq data Description: Pipeline with scripts for Iso-Seq after clustering step pISA Assay creation date: 2021-09-18 pISA Assay creator: MPE Phenodata: ../../phenodata_20190523.txt Featuredata: Data:

Submitter: Marko Petek

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: _I_T31_mealybug

Study: _S_P4_Pcitri_IsoSeq

Organisms: No organisms

SOPs: No SOPs

Data files: _ASSAY_METADATA.TXT, input/pt_025_001.flnc.report.csv.zip, input/pt_025_001.summary.csv, input/pt_025_001.unpolished.cluster_report.csv.zip, output/Pcitri.collapsed.abundance.txt, output/Pcitri.collapsed.filtered.abundance.txt, output/Pcitri.collapsed.filtered.rep.fa.seqleng..., output/Pcitri.collapsed.filtered.rep.fa.stats.txt, output/Pcitri.collapsed.group.txt, output/Pcitri.collapsed.group.txt.unfuzzy, output/Pcitri.collapsed.read_stat.txt.zip, output/Pcitri.ignored_ids.txt, reports/NGI_ProjectInfo.txt, scripts/Pcitri_IsoSeq_cDNAcupcake_commands.txt, scripts/download_from_NGI.txt

Snapshots: No snapshots

Created: 16th May 2022 at 10:33, Last updated: 6th Nov 2024 at 15:25

Assays

Filters ×

Filters