Assays

1 Assay visible to you, out of a total of 1

SUSPHIRE - Sustainable Bioproduction of Pheromones for Insect Pest Control in Agriculture

Short Name: 02b_limmavoom-uniquem-R Assay Class: DRY Assay Type: R Title: Limmavoom DE analysis of uniquely mapped SxP Illumina reads Description: DE analysis with limma-voom script in R of total count data from mapping of SxPv1.0 and v1.2 reads to NbV3.5 genome and counting only uniquely mapped reads. pISA Assay creation date: 2021-12-30 pISA Assay creator: Mojca Jutersek Analyst: Mojca Jutersek Phenodata: None Featuredata: Data:

Submitter: Marko Petek

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: _I_T21_SXPsysbio

Study: _S_P4_SxP1012-finalG

Organisms: No organisms

SOPs: No SOPs

Data files: _ASSAY_METADATA.TXT, input/unique_totalCounts.txt, output/All_samples/limmavoom-unique-v10-logFC-p..., output/All_samples/limmavoom-unique-v12-byPheno..., output/All_samples/limmavoom-unique-v12-logFC-p..., output/All_samples/unique-v10&v12-logFC-pAdj.xlsx, output/All_samples/unique-v10-logFC-pAdj-normC...., output/All_samples/unique-v12-logFC-pAdj-normC-..., output/All_samples/unique-v12-logFC-pAdj-normC-..., output/DEgenes.txt, output/Without_outliers/byLines/limmavoom-uniqu..., output/Without_outliers/byLines/limmavoom-uniqu..., output/Without_outliers/byPhenotype/limmavoom-u..., output/Without_outliers/byPhenotype/limmavoom-u..., output/Without_outliers/byPhenotype/limmavoom-u..., output/experimentComp.txt, output/low2Analysis.xlsx

Snapshots: No snapshots

Created: 9th Apr 2022 at 18:53, Last updated: 21st Sep 2022 at 10:45

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