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4126 Data files visible to you, out of a total of 6170
Global sensitivity analysis - correlation between parameters

Shows the correlation in metabolic control between parameters. The plot shows central carbon metabolis basically consist of a few control hubs of reactions of which the parameters are correlated. In other words, just the reaction network combined with allosteric control and equilibrium constants impose some constrains on possible parameter value combinations that lead to certain behaviour (such as the flux and concentrations measured in vivo/vitro).

Creators: None

Submitter: Niels Zondervan

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Global sensitivity analysis - tab seperated file

Contains the raw output of the global sensitivity analysis, can be used as input for plotting using the R script "plotLocalGlobalSensitivity1.5.R" associated to the same asset

Creators: None

Submitter: Niels Zondervan

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Copasi model file used to create the SBML file, PLM_7_ 2

Data file for PLaSMo accesssion ID PLM_7, version 2

Creators: BioData SynthSys, Carl Troein, Andrew Millar

Submitter: BioData SynthSys

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Copasi model file, PLM_89_ 2

Data file for PLaSMo accesssion ID PLM_89, version 2

Creators: BioData SynthSys, Carl Troein, Andrew Millar

Submitter: BioData SynthSys

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TRIFFID model diagram,PLM_5_ 1

Data file for PLaSMo accesssion ID PLM_5, version 1

Creators: BioData SynthSys, Robert Muetzelfeldt

Submitter: BioData SynthSys

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Copasi model file, PLM_89_ 1

Data file for PLaSMo accesssion ID PLM_89, version 1

Creators: BioData SynthSys, Carl Troein, Andrew Millar

Submitter: BioData SynthSys

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Copasi model file, PLM_91_ 1

Data file for PLaSMo accesssion ID PLM_91, version 1

Creators: BioData SynthSys, Carl Troein, Andrew Millar

Submitter: BioData SynthSys

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Copasi model file, PLM_90_ 1

Data file for PLaSMo accesssion ID PLM_90, version 1

Creators: BioData SynthSys, Carl Troein, Andrew Millar

Submitter: BioData SynthSys

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Copasi model file, PLM_87_ 1

Data file for PLaSMo accesssion ID PLM_87, version 1

Creators: BioData SynthSys, Carl Troein, Andrew Millar

Submitter: BioData SynthSys

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Copasi model file, PLM_92_ 1

Data file for PLaSMo accesssion ID PLM_92, version 1

Creators: BioData SynthSys, Carl Troein, Andrew Millar

Submitter: BioData SynthSys

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Copasi model file, PLM_85_ 1

Data file for PLaSMo accesssion ID PLM_85, version 1

Creators: BioData SynthSys, Carl Troein, Andrew Millar

Submitter: BioData SynthSys

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Copasi model file, PLM_88_ 1

Data file for PLaSMo accesssion ID PLM_88, version 1

Creators: BioData SynthSys, Carl Troein, Andrew Millar

Submitter: BioData SynthSys

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Copasi model file, PLM_86_ 1

Data file for PLaSMo accesssion ID PLM_86, version 1

Creators: BioData SynthSys, Carl Troein, Andrew Millar

Submitter: BioData SynthSys

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Copasi model file, PLM_83_ 1

Data file for PLaSMo accesssion ID PLM_83, version 1

Creators: BioData SynthSys, Carl Troein, Andrew Millar

Submitter: BioData SynthSys

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Copasi model file, PLM_84_ 1

Data file for PLaSMo accesssion ID PLM_84, version 1

Creators: BioData SynthSys, Carl Troein, Andrew Millar

Submitter: BioData SynthSys

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SUCROS1 parameter files (zipped), PLM_24_ 1

Data file for PLaSMo accesssion ID PLM_24, version 1

Creators: BioData SynthSys, Jonathan Massheder

Submitter: BioData SynthSys

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Read me file, PLM_24_ 1

Data file for PLaSMo accesssion ID PLM_24, version 1

Creators: BioData SynthSys, Jonathan Massheder

Submitter: BioData SynthSys

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Display configuation file, PLM_24_ 1

Data file for PLaSMo accesssion ID PLM_24, version 1

Creators: BioData SynthSys, Jonathan Massheder

Submitter: BioData SynthSys

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Simile model file (load straight into Simile), PLM_24_ 1

Data file for PLaSMo accesssion ID PLM_24, version 1

Creators: BioData SynthSys, Jonathan Massheder

Submitter: BioData SynthSys

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Paramter file Netherlands 1973, PLM_24_ 1

Data file for PLaSMo accesssion ID PLM_24, version 1

Creators: BioData SynthSys, Jonathan Massheder

Submitter: BioData SynthSys

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Instructions on how to use the SED-ML archive file, PLM_52_ 1

Data file for PLaSMo accesssion ID PLM_52, version 1

Creators: BioData SynthSys, Richard Adams

Submitter: BioData SynthSys

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Entrained oscillations are maintained, despite an increase in Vs to 5 at t=72,PLM_52_ 1

Data file for PLaSMo accesssion ID PLM_52, version 1

Creators: BioData SynthSys, Richard Adams

Submitter: BioData SynthSys

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SEDX archive containing the model file and a simulation protocol to reproduce the figure, PLM_52_ 1

Data file for PLaSMo accesssion ID PLM_52, version 1

Creators: BioData SynthSys, Richard Adams

Submitter: BioData SynthSys

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Instructions on how to use the SED-ML archive, PLM_51_ 1

Data file for PLaSMo accesssion ID PLM_51, version 1

Creators: BioData SynthSys, Richard Adams

Submitter: BioData SynthSys

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SEDX Archive reproducing a phase response parameter scan, reproducing Figure 5 of Leloup et al. 1999, PLM_51_ 1

Data file for PLaSMo accesssion ID PLM_51, version 1

Creators: BioData SynthSys, Richard Adams

Submitter: BioData SynthSys

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A SED-ML archive file containing the model and simulation set up to run the model, PLM_51_ 1

Data file for PLaSMo accesssion ID PLM_51, version 1

Creators: BioData SynthSys, Richard Adams

Submitter: BioData SynthSys

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Instructions on how to use the SED-ML archive file, PLM_66_ 1

Data file for PLaSMo accesssion ID PLM_66, version 1

Creators: BioData SynthSys, Richard Adams

Submitter: BioData SynthSys

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After 72 hrs, the light function increases to 4.1, leading to chaotic oscillations,PLM_51_ 1

Data file for PLaSMo accesssion ID PLM_51, version 1

Creators: BioData SynthSys, Richard Adams

Submitter: BioData SynthSys

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Simulation trace of LHY and TOc1 mRNA in LD8:16,PLM_66_ 1

Data file for PLaSMo accesssion ID PLM_66, version 1

Creators: BioData SynthSys, Richard Adams

Submitter: BioData SynthSys

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SEDX archive containing the model file and a simulation protocol to reproduce the figure, PLM_66_ 1

Data file for PLaSMo accesssion ID PLM_66, version 1

Creators: BioData SynthSys, Richard Adams

Submitter: BioData SynthSys

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