Selected Cell
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data
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organism_sample
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| salt, -GB | column header | on/off | Ratio | %SD | on/off | Ratio | %SD | on/off | Ratio | %SD | Q_Peptides | I_Peptides | Q_Peptides | I_Peptides | Q_Peptides | I_Peptides | |
| sample | µ=0.1_NaC-GB_Br1 | µ=0.1_NaC-GB_Br1 | µ=0.1_NaC-GB_Br1 | µ=0.1_NaC-GB_Br2 | µ=0.1_NaC-GB_Br2 | µ=0.1_NaC-GB_Br2 | µ=0.1_NaC-GB_Br3 | µ=0.1_NaC-GB_Br3 | µ=0.1_NaC-GB_Br3 | µ=0.1_NaC-GB_Br1 | µ=0.1_NaC-GB_Br1 | µ=0.1_NaC-GB_Br2 | µ=0.1_NaC-GB_Br2 | µ=0.1_NaC-GB_Br3 | µ=0.1_NaC-GB_Br3 | ||
| SWISS-PROT-ID | BSU-NUM | LOCUS | |||||||||||||||
| C0H3T0 | BSU01935 | skfC | off | -6.64385619 | 0 | off | -6.64385619 | 0 | 3 | 3 | 4 | 4 | |||||
| C0H3V2 | BSU03982 | mtlF | 1.6233420026105825 | 8.011049723756905 | 3 | 2 | 4 | ||||||||||
| C0H3X4 | BSU06811 | yezG | 0.3094491556056713 | 2.3166023166023164 | 0.30340520554231165 | 10.344827586206897 | 2 | 2 | 4 | 5 | |||||||
| C0SP82 | BSU18570 | yoaE | -0.7531628216940074 | 3.225806451612903 | 2 | 2 | |||||||||||
| C0SP93 | BSU29210 | accD | -0.7186744453087168 | 14.960629921259844 | -1.1216163823091543 | 11.11111111111111 | -0.590557421878633 | 23.770491803278688 | 7 | 7 | 4 | 6 | 4 | 6 | |||
| C0SPB1 | BSU31945 | yukJ | 2.248290775447491 | 144.71299093655588 | 3.979143281554643 | 9.169019562780752 | 3.497600861680131 | 68.96385542168674 | 5 | 9 | 4 | 8 | 4 | 8 | |||
| C0SPB6 | BSU36310 | ssbB | off | -6.64385619 | 0 | off | -6.64385619 | 0 | off | -6.64385619 | 0 | 3 | 3 | 3 | 3 | 3 | 4 |
| C0SPC3 | BSU12190 | yjhB | on | 6.64385619 | 0 | 3 | 4 | 3 | 3 | ||||||||
| O05220 | BSU36080 | ywrF | -0.6739361305434324 | 16.793893129770993 | -1.5911016656103745 | 20.51282051282051 | 2 | 2 | 2 | 2 | |||||||
| O05236 | BSU31410 | alaR | 0.09999578997672165 | 8.928571428571429 | -0.12161638230915417 | 8.333333333333332 | 0.25349230015965407 | 17.351598173515985 | 6 | 8 | 6 | 8 | 3 | 5 | |||
| O05239 | BSU31370 | yugJ | 1.5574743894435696 | 9.329964458162975 | 1.6703905754150141 | 15.240641711229944 | 1.147590224824728 | 58.23095823095823 | 6 | 14 | 8 | 11 | 5 | 10 | |||
| O05243 | BSU31280 | yugU | 0.5581243431641019 | 4.624277456647399 | 2 | 3 | |||||||||||
| O05252 | BSU31540 | yufN | -0.8369944124974782 | 8.547008547008549 | -0.8541360714441683 | 1.5384615384615383 | -0.46601232394032954 | 8.270676691729323 | 4 | 7 | 2 | 4 | 4 | 6 | |||
| O05265 | BSU31170 | yulF | -0.3236548396068304 | 5.988023952095809 | 4 | 5 | |||||||||||
| O05268 | BSU32110 | yumC | 0.23515537325835734 | 17.073170731707314 | 0.25277913247234374 | 17.459866516543208 | 0.361348289920322 | 4.237288135593221 | 12 | 15 | 9 | 12 | 7 | 10 | |||
| O05394 | BSU27250 | mccB | 0.2756344426134276 | 11.179553852751619 | 0.17219219805780583 | 2.898550724637681 | 2 | 7 | 2 | 3 | |||||||
| O05496 | BSU05720 | ydhE | -0.431234726806645 | 7.096774193548387 | -0.7267567649679408 | 15.492957746478876 | 2 | 3 | 3 | 5 | |||||||
| O05503 | BSU05790 | ydhK | 1.8813555035013814 | 27.92207792207792 | 3 | 4 | 2 | 2 | |||||||||
| O05515 | BSU05910 | ydiB | 0.10077603902729368 | 12.698412698412698 | 3 | 2 | 2 | ||||||||||
| O05520 | BSU05960 | ydiG | -0.647685193976742 | 26.666666666666668 | 2 | 3 | 3 | ||||||||||
| O06006 | BSU27020 | yraA | 1.8586949060902092 | 20.149744688165434 | 0.8096221186730979 | 141.30434782608694 | 2 | 6 | 3 | 2 | 4 | ||||||
| O06475 | BSU07380 | yfmQ | off | -6.64385619 | 0 | off | -6.64385619 | 0 | 2 | 2 | 4 | 4 | |||||
| O06478 | BSU07350 | yfmT | off | -6.64385619 | 0 | off | -6.64385619 | 0 | off | -6.64385619 | 0 | 6 | 7 | 7 | 8 | 5 | 5 |
| O06491 | BSU06680 | gatA | 0.28287378775801186 | 22.207592404873537 | 0.10306421562256388 | 25.018101002114246 | 0.706722211088807 | 21.626224572676303 | 11 | 15 | 10 | 15 | 6 | 14 | |||
| O06724 | BSU10750 | yisK | 0.9615258521853647 | 6.6339066339066335 | 0.8377416331934999 | 10.952380952380953 | 1.1998044292656658 | 20.14218009478673 | 5 | 6 | 3 | 5 | 2 | 3 | |||
| O06743 | BSU10990 | yitH | on | 6.64385619 | 0 | 3 | 2 | 3 | |||||||||
| O06744 | BSU11000 | yitI | 0.06601062086661705 | 14.634146341463413 | 2 | 2 | 1 | ||||||||||
| O06747 | BSU11030 | yitL | 0.4544129936419943 | 8.695652173913043 | 2 | 2 | |||||||||||
| O06965 | BSU34850 | yvcA | -1.1223966313597264 | 15.625 | -1.5911016656103745 | 2.564102564102564 | -0.6758047084971441 | 11.304347826086957 | 3 | 5 | 3 | 3 | 4 | 4 | |||
| O06972 | BSU34780 | yvcI | -0.3219150327949855 | 1.0638297872340428 | 2 | 3 | |||||||||||
| O06977 | BSU34730 | yvcN | 1.2727804455582745 | 27.920792079207917 | 0.6548775760436893 | 8.648648648648647 | 2 | 3 | 2 | 3 | 2 | ||||||
| O06988 | BSU34620 | yvdF | on | 6.64385619 | 0 | 4 | 6 | 2 | 2 | ||||||||
| O06994 | BSU34560 | malL | on | 6.64385619 | 0 | 2 | 2 | ||||||||||
| O07001 | BSU34480 | yvdT | -0.9129432657307766 | 9.00900900900901 | 2 | 3 | |||||||||||
| O07006 | BSU34400 | padC | -0.10744628989375493 | 10.309278350515465 | -0.1760641663315306 | 7.6923076923076925 | 3 | 5 | 2 | 2 | 2 | ||||||
| O07012 | BSU34130 | lacA | on | 6.64385619 | 0 | 4 | 2 | 2 | |||||||||
| O07020 | BSU34050 | lutA | 0.2926408679191175 | 13.671875 | 0.8029762150328232 | 77.56097560975611 | 0.6635805834667647 | 24.054982817869412 | 4 | 6 | 3 | 5 | 2 | 4 | |||
| O07021 | BSU34040 | lutB | -0.9000042100232784 | 19.642857142857142 | -0.7679794276944539 | 72.46376811594205 | -0.7531104346645928 | 38.532110091743114 | 10 | 13 | 5 | 9 | 4 | 6 | |||
| O07081 | BSU26760 | yrdC | 0.9110263701777239 | 22.13740458015267 | 3 | 4 | 2 | 2 | |||||||||
| O07513 | BSU10030 | hit | 0.006886385585240129 | 5.714285714285714 | 0.06601062086661705 | 18.699186991869922 | 0.004878410072031714 | 16.332027399545115 | 3 | 5 | 4 | 5 | 3 | 6 | |||
| O07516 | BSU10000 | yhaH | 0.37478990927298894 | 1.107011070110701 | 0.12349611552737724 | 9.375 | 0.39756847783307525 | 14.87603305785124 | 3 | 5 | 4 | 4 | 2 | 7 | |||
| O07521 | BSU09930 | yhaM | -1.1837971760238697 | 4.3478260869565215 | -1.4170722658353256 | 4.545454545454546 | 2 | 3 | 2 | 3 | |||||||
| O07529 | BSU09340 | yhdA | 0.5678342018213236 | 20.466445163885595 | 0.29342111696968953 | 49.30555555555555 | 0.44448952522056784 | 15.2 | 5 | 8 | 7 | 8 | 4 | 6 | |||
| O07533 | BSU09880 | yhaR | on | 6.64385619 | 0 | on | 6.64385619 | 0 | 3 | 3 | 2 | 3 | |||||
| O07535 | BSU09860 | yhaT | on | 6.64385619 | 0 | 4.063809712673346 | 141.37404580152673 | on | 6.64385619 | 0 | 5 | 6 | 2 | 4 | 4 | 4 | |
| O07542 | BSU09800 | yheA | 0.8201178739795134 | 141.19241192411926 | 0.6548775760436893 | 87.56756756756758 | on | 6.64385619 | 0 | 2 | 5 | 3 | 4 | 2 | 7 | ||
| O07573 | BSU09380 | nsrR | -2.1223966313597264 | 8.333333333333334 | -1.9696132888641045 | 3.3333333333333335 | -1.638651710079678 | 13.559322033898304 | 3 | 3 | 4 | 5 | 2 | 2 | |||
| O07575 | BSU09450 | yhdF | on | 6.64385619 | 0 | on | 6.64385619 | 0 | 2 | 2 | 2 | 2 | |||||
| O07584 | BSU09540 | plsC | -3.38543103719352 | 10 | -3.7065788830303106 | 0 | -3.4338319181911796 | 23.52941176470588 | 4 | 4 | 2 | 4 | 2 | 2 | |||
| O07592 | BSU09620 | yhdW | 1.4854398892626186 | 10.030395136778116 | 7 | 3 | 5 | 4 | |||||||||
| O07595 | BSU09650 | srtN | -0.39447617679652713 | 32.70440251572327 | -0.536653881587998 | 23.456790123456788 | 3 | 5 | 2 | 4 | 3 | ||||||
| O07597 | BSU09670 | dat | 1.0556160468923117 | 11.13328314188102 | 1.1291206647212553 | 10.894941634241247 | 1.2421547562253734 | 10.211585912267571 | 7 | 14 | 8 | 10 | 7 | 10 | |||
| O07598 | BSU10070 | yhaA | 2.104015561429059 | 9.393196134850577 | 1.4499256026496803 | 13.70716510903427 | 1.74080008592866 | 15.472312703583063 | 5 | 13 | 5 | 8 | 3 | 6 | |||
| O07603 | BSU10200 | yhfE | 1.0112960529232502 | 17.394823961765425 | 0.9450929601607603 | 16.041628815341276 | 1.1369167233102757 | 11.115671275006209 | 7 | 12 | 9 | 11 | 4 | 7 | |||
| O07604 | BSU10210 | yhfF | 0.613131560779407 | 141.28113879003558 | 2 | 2 | |||||||||||
| O07605 | BSU10220 | gltT | off | -6.64385619 | 0 | 2 | 2 | ||||||||||
| O07607 | BSU10240 | yhfI | 1.9073507120343252 | 17.857142857142858 | 2 | 4 | 2 | 3 | |||||||||
| O07609 | BSU10260 | yhfK | 1.5564968875151999 | 23.630488767323044 | 1.3523148060232582 | 18.999999999999996 | 1.5839590202593639 | 18.733987501369366 | 4 | 10 | 6 | 8 | 4 | 7 | |||
| O07617 | BSU10340 | yhfR | 2.633232807071516 | 25.272145660333706 | 1.7817075982791721 | 86.88118811881188 | 2.6398371235427875 | 26.061053420150493 | 3 | 11 | 3 | 8 | 2 | 6 | |||
| O07618 | BSU10350 | yhfS | on | 6.64385619 | 0 | 2 | 5 | 2 | 2 | ||||||||
| O07621 | BSU10380 | hemAT | off | -6.64385619 | 0 | off | -6.64385619 | 0 | off | -6.64385619 | 0 | 3 | 4 | 5 | 6 | 3 | 3 |
| O07631 | BSU14770 | ylaG | off | -6.64385619 | 0 | 3 | 3 | 3 | 2 | ||||||||
| O07939 | BSU10860 | yisT | 1.7959214574988727 | 17.64705882352941 | 3 | 2 | 5 | 2 | |||||||||
| O30509 | BSU06690 | gatB | -0.20552194717858585 | 25.540309830230957 | 0.7528527356069867 | 67.17171717171718 | -0.11190382330381754 | 7.825961585676425 | 12 | 18 | 12 | 16 | 7 | 15 | |||
| O31404 | BSU08060 | acoA | on | 6.64385619 | 0 | on | 6.64385619 | 0 | on | 6.64385619 | 0 | 5 | 5 | 2 | 2 | 4 | 4 |
| O31418 | BSU00950 | mrnC | -0.0820880181225167 | 15.315315315315313 | 2 | 2 | |||||||||||
| O31423 | BSU01920 | skfB | off | -6.64385619 | 0 | off | -6.64385619 | 0 | off | -6.64385619 | 0 | 3 | 2 | 2 | 2 | 2 | 2 |
| O31429 | BSU01970 | skfG | off | -6.64385619 | 0 | off | -6.64385619 | 0 | 1 | 2 | 3 | 2 | 3 | ||||
| O31440 | BSU02100 | cypC | on | 6.64385619 | 0 | on | 6.64385619 | 0 | on | 6.64385619 | 0 | 5 | 5 | 3 | 4 | 2 | 4 |
| O31447 | BSU02200 | ybfG | on | 6.64385619 | 0 | on | 6.64385619 | 0 | on | 6.64385619 | 0 | 12 | 15 | 6 | 8 | 8 | 9 |
| O31474 | BSU03160 | ycgJ | on | 6.64385619 | 0 | 2 | 2 | ||||||||||
| O31484 | BSU04130 | yczJ | -0.41707226583532553 | 1.1363636363636365 | -0.1204153231593349 | 10.650887573964498 | 2 | 2 | 2 | 2 | 2 | ||||||
| O31489 | BSU04780 | ydcI | -1.2040785425011273 | 15.686274509803921 | 0.06366774127963692 | 26.5625 | 3 | 4 | 2 | 4 | |||||||
| O31501 | BSU06710 | swrC | off | -6.64385619 | 0 | 2 | 3 | 3 | 2 | ||||||||
| O31513 | BSU06920 | yesJ | on | 6.64385619 | 0 | 3 | 6 | 2 | |||||||||
| O31534 | BSU07150 | yetG | 0.36945646496994833 | 172.96296296296293 | 1.4409087292922467 | 4.075235109717869 | 3 | 4 | 3 | 6 | 3 | ||||||
| O31556 | BSU08150 | yfjC | on | 6.64385619 | 0 | 1.7824859887355837 | 173.25949367088606 | 9 | 10 | 8 | 3 | 7 | |||||
| O31560 | BSU08370 | yfiR | -0.17597767156457045 | 5.945945945945946 | -0.5014644531256981 | 26.506024096385545 | 4 | 6 | 2 | 3 | 3 | ||||||
| O31570 | BSU08470 | yfhB | -0.9931136144147599 | 173.33333333333334 | 3 | 6 | 2 | ||||||||||
| O31571 | BSU08480 | yfhC | 1.2584251525812042 | 11.799999999999999 | 1.2056451568812487 | 14.022140221402216 | 1.4094425781213669 | 7.991803278688526 | 8 | 10 | 6 | 9 | 3 | 7 | |||
| O31581 | BSU08590 | yfhM | 0.9615258521853647 | 6.6339066339066335 | 0.7745478067063056 | 22.885572139303488 | 6 | 11 | 2 | 4 | 6 | ||||||
| O31590 | BSU08930 | cspR | -0.6093270491203558 | 141.6058394160584 | 0.26304746792617073 | 7.801418439716312 | 2 | 4 | 3 | 4 | 1 | ||||||
| O31605 | BSU11540 | pepF | 1.0239598989441816 | 31.294117647058826 | 0.9702401387722455 | 19.28614099644068 | 1.0900138374223474 | 9.759540446882555 | 23 | 31 | 10 | 22 | 13 | 25 | |||
| O31611 | BSU11600 | yjbM | 1.4167621797483052 | 33.15412186379928 | 1.060134054529948 | 53.87755102040816 | 4 | 6 | 4 | 5 | 3 | ||||||
| O31612 | BSU11610 | nadF | -1.6285763710290373 | 26.31578947368421 | 3 | 3 | 2 | ||||||||||
| O31616 | BSU11670 | thiO | 0.7643160823111617 | 29.85915492957747 | 0.6312907557260735 | 12.637362637362637 | 0.2201722269596278 | 11.214953271028035 | 4 | 10 | 5 | 7 | 2 | 3 | |||
| O31618 | BSU11690 | thiG | 1.0000000000000002 | 13.397129186602875 | 0.7159531527954576 | 14.50777202072539 | 0.9544386715248785 | 4.775280898876405 | 7 | 11 | 9 | 9 | 7 | 10 | |||
| O31620 | BSU11710 | thiD | -0.0853073126245063 | 17.76649746192893 | -0.7679794276944539 | 8.695652173913043 | -0.14625532809459452 | 19.27710843373494 | 4 | 7 | 4 | 4 | 2 | 3 | |||
| O31629 | BSU11850 | yjcG | 1.8472297195967544 | 44.148936170212764 | 1.5215271895005311 | 9.180474754497286 | 1.4064832026408232 | 67.14579055441479 | 9 | 14 | 6 | 7 | 4 | 10 | |||
| O31631 | BSU11870 | metI | 0 | 172.72727272727272 | 1.5911016656103747 | 12.429378531073446 | 3 | 4 | 2 | 7 | 7 | ||||||
| O31632 | BSU11880 | metC | 1.3551367936528818 | 14.308081919022008 | 1.9544386715248787 | 26.54494382022472 | 4 | 8 | 7 | 3 | 4 | ||||||
| O31638 | BSU11940 | yjcP | off | -6.64385619 | 0 | 2 | 2 | ||||||||||
| O31642 | BSU11980 | yjdA | 1.1599196076287794 | 2.569593147751606 | 2 | 3 | 3 | ||||||||||
| O31643 | BSU11990 | yjdB | off | -6.64385619 | 0 | 2 | 2 | ||||||||||
| O31656 | BSU13480 | ykrK | -0.49790576645193285 | 19.594594594594593 | 2 | 3 | |||||||||||
| O31657 | BSU13490 | ykrL | -0.34980712746279896 | 50.609756097560975 | -0.8104146940148503 | 7.462686567164178 | -0.39201174249655285 | 2.142857142857143 | 4 | 4 | 3 | 3 | 3 | 3 | |||
| O31662 | BSU13550 | mtnA | -0.9259994185562229 | 14.545454545454545 | -1.0436138703078812 | 19.29824561403509 | -0.590557421878633 | 4.918032786885246 | 12 | 13 | 8 | 9 | 8 | 9 | |||
| O31663 | BSU13560 | mtnK | 0.08054342731054898 | 110.40723981900453 | -0.23264769469789812 | 105 | -0.23589254057927078 | 10.897435897435898 | 10 | 11 | 7 | 10 | 7 | 11 | |||
| O31664 | BSU13570 | mtnU | -2.0691489624150186 | 142.85714285714286 | 2 | 2 | 2 | ||||||||||
| O31668 | BSU13610 | mtnB | 1.1722241175319004 | 23.119839554719395 | 0.7455479349837535 | 4.060913705583757 | 2 | 4 | 2 | 2 | 2 | ||||||
| O31669 | BSU13620 | mtnD | 1.178337241258513 | 18.393234672304438 | 1.2934211169696894 | 36.458333333333336 | 0.9544386715248785 | 3.651685393258427 | 6 | 11 | 6 | 10 | 2 | 5 | |||
| O31672 | BSU13670 | mhqR | -0.9696132888641044 | 20 | -0.638651710079678 | 2.5423728813559325 | 2 | 2 | 2 | 2 | 2 | ||||||
| O31675 | BSU13720 | queC | -1.1837971760238697 | 18.47826086956522 | -1.4841864616938625 | 50 | 2 | 2 | 3 | 4 | |||||||
| O31677 | BSU13740 | queE | -0.2617940403574146 | 28.571428571428577 | 2 | 2 | |||||||||||
| O31678 | BSU13750 | queF | -0.41707226583532553 | 3.4090909090909087 | 2 | 3 | |||||||||||
| O31689 | BSU13860 | ykvY | -0.39447617679652713 | 54.71698113207547 | 2 | 4 | |||||||||||
| O31703 | BSU14280 | moeA | 0.8004355081178138 | 17.58241758241758 | 1.0122393644256362 | 24.89451476793249 | 2 | 8 | 5 | 8 | 6 | ||||||
| O31705 | BSU14300 | moaE | 0.2926408679191175 | 19.53125 | 3 | 3 | |||||||||||
| O31709 | BSU14340 | yknW | -5.385431037193521 | 140 | 2 | 2 | 2 | ||||||||||
| O31716 | BSU14430 | ykpA | 0.48739772234136547 | 19.295806735635672 | 0.23897333294731324 | 7.249897979286191 | 0.9028715293765808 | 7.204872588509495 | 11 | 19 | 6 | 11 | 2 | 13 | |||
| O31717 | BSU14440 | ykpB | -0.5076867872445183 | 25.850340136054424 | -0.19037788132690214 | 22.360248447204967 | 2 | 2 | 2 | 2 | |||||||
| O31723 | BSU15340 | ylmA | 0.20553020414907897 | 23.236514522821576 | -0.0820880181225167 | 8.108108108108107 | 0.10075706001485707 | 10.152284263959393 | 6 | 7 | 4 | 5 | 2 | 5 | |||
| O31724 | BSU15350 | ylmB | 1.9685979008608665 | 62.46943765281174 | 1.6587714921481806 | 45.55256064690027 | 2.106239125031273 | 76.48546144121366 | 5 | 12 | 7 | 8 | 4 | 8 | |||
| O31726 | BSU15370 | ylmD | on | 6.64385619 | 0 | on | 6.64385619 | 0 | 2 | 2 | 2 | 3 | 3 | ||||
| O31727 | BSU15380 | ylmE | -0.24792751344358532 | 0 | -0.40077045350622503 | 0 | 2 | 2 | 2 | 2 | |||||||
| O31728 | BSU15390 | sepF | 1.9091897116981065 | 1.0191082802547773 | 2 | 3 | |||||||||||
| O31738 | BSU16000 | ylqC | 0.8510615811877815 | 15.119363395225463 | 0.7888320327125533 | 23.152709359605915 | 2 | 2 | 2 | 3 | 2 | ||||||
| O31740 | BSU16020 | rimM | -0.15277028040324536 | 9.574468085106384 | 2 | 2 | |||||||||||
| O31742 | BSU16040 | rplS | -1.0926492879656744 | 26.53061224489796 | -1.667050518843673 | 18.91891891891892 | -0.6808315255719768 | 9.349455662114462 | 6 | 6 | 5 | 7 | 5 | 9 | |||
| O31743 | BSU16050 | rbgA | -0.06914896241501856 | 4.464285714285714 | 3 | 2 | 3 | 2 | |||||||||
| O31749 | BSU16510 | pyrH | -1.4785404415850016 | 30.66666666666667 | -1.5545757895852603 | 25 | -1.013500119242823 | 6.593406593406594 | 5 | 5 | 4 | 5 | 5 | 5 | |||
| O31755 | BSU16570 | proS | 0.11600810796535255 | 36.27619232997748 | -0.06914896241501856 | 5.357142857142856 | 0.4588448181976379 | 22.1233408767276 | 12 | 15 | 4 | 8 | 2 | 9 | |||
| O31760 | BSU16780 | rnjB | -0.6214125232779231 | 29.06123379556774 | -1.0436138703078812 | 8.771929824561404 | -0.8630832766897245 | 9.900990099009901 | 7 | 15 | 7 | 9 | 8 | 8 | |||
| O31764 | BSU16845 | ymfF | 0.8776033686402738 | 16.927083333333336 | 0.5992295464937749 | 9.55056179775281 | 0.8230011484742976 | 9.846153846153847 | 4 | 8 | 5 | 9 | 5 | 6 | |||
| O31766 | BSU16860 | ymfH | 1.2068598770919496 | 22.668054358337606 | 0.8883677062634678 | 23.84987238564725 | 0.8580836076297431 | 8.108108108108109 | 9 | 14 | 8 | 13 | 6 | 11 | |||
| O31774 | BSU16960 | rny | -2.9000042100232784 | 50 | off | -6.64385619 | 0 | 2 | 2 | 4 | 5 | ||||||
| O31775 | BSU16970 | ymdB | -0.47854044158500175 | 27.999999999999996 | -0.6670505188436731 | 17.56756756756757 | -0.2733672459979337 | 12.5 | 6 | 6 | 4 | 5 | 3 | 4 | |||
| O31787 | BSU17250 | ymaE | -1.4035783839037796 | 3.797468354430379 | -0.8919381393619097 | 14.141414141414144 | 2 | 4 | 2 | 2 | |||||||
| O31790 | BSU17280 | ymaD | 0.4824654267991346 | 35.273972602739725 | 0.6391959538114196 | 12.568306010928962 | 2 | 3 | 2 | 2 | |||||||
| O31796 | BSU17340 | hfq | -0.47854044158500175 | 14.666666666666666 | -0.38465078814294806 | 7.777777777777778 | -0.4338319181911797 | 27.941176470588236 | 4 | 4 | 4 | 4 | 2 | 4 | |||
| O31806 | BSU17730 | yndB | 0.006139164889218368 | 16.949152542372882 | 2 | 3 | |||||||||||
| O31857 | BSU19460 | yojG | 0.08705673426922345 | 8.108108108108107 | 0.2527791324723436 | 15.714285714285717 | 0.056134068594229314 | 7.853403141361256 | 4 | 4 | 3 | 3 | 2 | 2 | |||
| O31974 | BSU21330 | yomK | off | -6.64385619 | 0 | 2 | 3 | ||||||||||
| O31986 | BSU21450 | yolJ | off | -6.64385619 | 0 | 3 | 4 | 2 | |||||||||
| O31989 | BSU21490 | sunI | off | -6.64385619 | 0 | -4.351369757999207 | 15.713484026367814 | 3 | 5 | 3 | 2 | 6 | |||||
| O32000 | BSU21600 | yokG | -1.7531628216940074 | 6.451612903225806 | -1.9223075740857476 | 22.580645161290324 | -1.3920117424965528 | 12.85714285714286 | 6 | 8 | 6 | 7 | 6 | 6 | |||
| O32001 | BSU21610 | yokF | off | -6.64385619 | 0 | 2 | 2 | ||||||||||
| O32028 | BSU27270 | mtnN | -1.7300792085809662 | 12.698412698412698 | 2 | 2 | 2 | 2 | |||||||||
| O32038 | BSU27550 | aspS | -0.5231036366755341 | 12.10862711920411 | -0.6754301844596459 | 10.6117289485663 | -0.3513697579992069 | 40.97222222222222 | 16 | 19 | 7 | 12 | 9 | 13 | |||
| O32039 | BSU27560 | hisS | -1.1837971760238697 | 23.913043478260867 | -1.7065788830303106 | 5.555555555555556 | -0.8919381393619097 | 13.131313131313133 | 3 | 3 | 2 | 3 | 2 | 4 | |||
| O32047 | BSU27650 | secDF | off | -6.64385619 | 0 | off | -6.64385619 | 0 | off | -6.64385619 | 0 | 2 | 4 | 3 | 6 | 3 | 3 |
| O32053 | BSU27710 | tgt | -0.06350294230615794 | 15 | 2 | 3 | 2 | 2 | |||||||||
| O32054 | BSU27720 | queA | 0.0137400566263024 | 14.691943127962087 | -0.12161638230915417 | 9.25925925925926 | 0.4955135282450347 | 5.7915057915057915 | 3 | 8 | 2 | 5 | 2 | 3 | |||
| O32065 | BSU29870 | ytzB | 0.09999578997672165 | 22.32142857142857 | 0.14586392855583172 | 9.23076923076923 | 2 | 2 | 4 | 4 | 2 | ||||||
| O32072 | BSU30310 | ytwF | -0.0820880181225167 | 33.33333333333333 | 0.8140955952524056 | 4.334365325077401 | 2 | 2 | 2 | 2 | |||||||
| O32075 | BSU31000 | yuaI | -0.49790576645193285 | 6.756756756756757 | -0.2471472643930132 | 16.161616161616163 | -0.26390691674886746 | 26.143790849673206 | 3 | 5 | 5 | 5 | 2 | 2 | |||
| O32090 | BSU31750 | pncB | -1.2356839176888383 | 9.839013631872099 | -2.3529419284156097 | 56.52173913043478 | -1.331470200561502 | 9.589041095890412 | 4 | 7 | 2 | 4 | 2 | 3 | |||
| O32091 | BSU31760 | pncA | 0.45251220469750675 | 11.18881118881119 | 3 | 4 | 1 | 1 | |||||||||
| O32099 | BSU31840 | yueD | 0.24243718825088453 | 8.633093525179856 | 0.5230993599169342 | 77.27272727272727 | 5 | 4 | 5 | 2 | 5 | ||||||
| O32106 | BSU32050 | yuiE | -0.8744691179161411 | 34.21052631578948 | -1.0951441709479632 | 10.909090909090907 | -1.2733672459979337 | 14.473684210526317 | 15 | 15 | 10 | 10 | 11 | 13 | |||
| O32117 | BSU32200 | yutJ | 0.027350488144955554 | 141.31455399061034 | 0.9436750779425647 | 5.3097345132743365 | 2 | 8 | 4 | 6 | 4 | ||||||
| O32119 | BSU32220 | yutI | 0.13472337095063133 | 20.155038759689923 | 0.787044270697888 | 18.29652996845426 | 1 | 2 | 2 | 2 | 2 | ||||||
| O32126 | BSU32300 | yutE | 1.1064896902216872 | 14.229249011857709 | 5 | 4 | 4 | 3 | |||||||||
| O32127 | BSU32310 | yutD | 0.48981832977319284 | 3.6363636363636362 | 2 | 2 | 3 | ||||||||||
| O32129 | BSU32330 | lipA | on | 6.64385619 | 0 | 5 | 7 | 6 | 4 | ||||||||
| O32152 | BSU32560 | yurK | 0.16789023488583074 | 9.848484848484848 | 4 | 2 | 4 | 2 | |||||||||
| O32153 | BSU32570 | yurL | on | 6.64385619 | 0 | 3.234631785762085 | 5.063291139240507 | 3.1599436523362865 | 75.33495736906211 | 3 | 4 | 3 | 3 | 4 | 4 | ||
| O32156 | BSU32600 | yurO | 2.4487239442077993 | 13.633960724017612 | 2.100776039027294 | 25.793650793650798 | on | 6.64385619 | 0 | 2 | 16 | 2 | 10 | 4 | 9 | ||
| O32157 | BSU32610 | yurP | 0.8240223284354298 | 56.75675675675676 | 1.2372382815765657 | 22.382671480144403 | 1.6808290643889412 | 7.300509337860782 | 5 | 9 | 6 | 9 | 7 | 10 | |||
| O32158 | BSU32620 | yurQ | 0.5547357132892967 | 23.12703583061889 | 0.3996205208016148 | 7.096774193548387 | 3 | 3 | 2 | 3 | 2 | ||||||
| O32161 | BSU32660 | yurT | 0.9292654884627662 | 141.4572864321608 | 1.8514165700905763 | 27.594339622641506 | 1.623363483390363 | 5.477031802120141 | 2 | 3 | 3 | 5 | 2 | 4 | |||
| O32162 | BSU32670 | yurU | 0.20553020414907897 | 33.19502074688796 | 0.030386711135895667 | 10.833333333333334 | 0.33045428197453863 | 14.665999667952189 | 16 | 21 | 11 | 14 | 9 | 17 | |||
| O32163 | BSU32680 | iscU | 2.0483086191331585 | 26.33744855967078 | 3.111246117105371 | 15.634297965132426 | 5 | 3 | 5 | 2 | 5 | ||||||
| O32164 | BSU32690 | csd | 1.5641038958234923 | 61.326860841423944 | 1.6113361493504286 | 33.70473537604457 | 1.6938337274623192 | 17.71113218407778 | 12 | 19 | 12 | 14 | 3 | 14 | |||
| O32165 | BSU32700 | yurX | 0.12887690996385048 | 16.379423742810033 | 0.05423345309026342 | 18.0327868852459 | 0.4094425781213671 | 9.836065573770492 | 17 | 24 | 17 | 21 | 12 | 20 | |||
| O32167 | BSU32730 | metQ | -0.44997128938823083 | 8.49673202614379 | -0.3219150327949855 | 7.446808510638299 | -0.1637427548234356 | 14.02439024390244 | 9 | 11 | 6 | 7 | 5 | 6 | |||
| O32174 | BSU32800 | gcvH | 1.8063684638715547 | 2.462380300957592 | 2 | 3 | 2 | ||||||||||
| O32177 | BSU32830 | fadA | on | 6.64385619 | 0 | 2 | 2 | ||||||||||
| O32178 | BSU32840 | fadN | on | 6.64385619 | 0 | on | 6.64385619 | 0 | on | 6.64385619 | 0 | 18 | 23 | 16 | 19 | 8 | 22 |
| O32210 | BSU33400 | yvgN | 1.2144818049936073 | 17.938144329896907 | 1.1569191170648276 | 14.885496183206106 | 0.8753100217403393 | 57.27002967359051 | 7 | 12 | 10 | 10 | 9 | 12 | |||
| O32211 | BSU33410 | yvgO | on | 6.64385619 | 0 | 1 | 2 | 2 | 1 | ||||||||
| O32213 | BSU33430 | cysI | 0.804393521686497 | 16.164383561643834 | 0.670390575415014 | 34.75935828877005 | 0.8989662619151 | 11.208298533666406 | 16 | 28 | 11 | 22 | 7 | 17 | |||
| O32214 | BSU33440 | cysJ | 0.7035739688652245 | 14.056135736103462 | 0.6470580715843901 | 9.782608695652172 | 0.7266327540020663 | 10.197368421052632 | 11 | 17 | 13 | 14 | 7 | 12 | |||
| O32223 | BSU33530 | yvaA | on | 6.64385619 | 0 | 2.443168236474372 | 19.092331768388107 | on | 6.64385619 | 0 | 4 | 9 | 2 | 6 | 2 | 5 | |
| O32224 | BSU33540 | azoR2 | 0.918349710983583 | 40.75949367088608 | 0.6391959538114196 | 19.12568306010929 | 0.6734620949807288 | 16.723549488054605 | 10 | 12 | 4 | 8 | 6 | 8 | |||
| O32230 | BSU33600 | smpB | 0.6720192349903797 | 3.6036036036036037 | 2 | 3 | |||||||||||
| O32231 | BSU33610 | rnr | 0.5069599887198832 | 33.67003367003367 | 0.28336745230576654 | 22.37762237762238 | 0.8086261261993739 | 8.987988382658912 | 13 | 20 | 13 | 15 | 9 | 17 | |||
| O32232 | BSU33620 | yvaK | -0.5884180593573753 | 28.776978417266193 | -0.4023536867180119 | 11.510791366906476 | 3 | 4 | 2 | 2 | 3 | ||||||
| O32243 | BSU33810 | opuCC | off | -6.64385619 | 0 | 3 | 2 | 2 | |||||||||
| O32245 | BSU33860 | yvbH | -0.3236548396068304 | 16.167664670658684 | -0.031013833528247686 | 22.608695652173914 | 2 | 3 | 2 | 4 | 3 | ||||||
| O32248 | BSU33890 | yvbK | -0.5274500420659481 | 20 | -0.43356038862389457 | 11.49425287356322 | -0.1637427548234356 | 8.536585365853659 | 4 | 4 | 4 | 4 | 2 | 3 | |||
| O32259 | BSU34030 | lutC | 0.1381309188634925 | 19.565217391304348 | -0.1760641663315306 | 23.076923076923077 | 0.24025647300295994 | 23.963133640552996 | 10 | 10 | 7 | 8 | 7 | 8 | |||
| O32264 | BSU34680 | yvcT | 2.9098021910284215 | 19.23512734120123 | 1.1140728616407516 | 190.7242143750871 | 3.3452114527846835 | 41.96434459318124 | 3 | 12 | 2 | 12 | 2 | 9 | |||
| O32294 | BSU40300 | rapG | -0.2831928432627825 | 15.712435247177375 | -0.2040785425011272 | 9.803921568627452 | -0.17256660521044176 | 19.631901840490798 | 4 | 8 | 2 | 3 | 3 | 4 | |||
| O34305 | BSU29850 | ytoQ | 1.79726126032267 | 14.032939644938944 | 1.376161547977626 | 56.393442622950815 | 1.779286600354453 | 5.295925714814046 | 5 | 8 | 5 | 10 | 5 | 7 | |||
| O34308 | BSU29420 | ytkK | 0.2527791324723436 | 35.714285714285715 | 2 | 2 | |||||||||||
| O34313 | BSU07840 | yfkN | on | 6.64385619 | 0 | on | 6.64385619 | 0 | on | 6.64385619 | 0 | 26 | 34 | 12 | 20 | 11 | 18 |
| O34318 | BSU15830 | yloU | -1.107446289893755 | 4.123711340206185 | -1.450239129770525 | 16.27906976744186 | -0.966705907763882 | 28.723404255319153 | 2 | 3 | 2 | 3 | 2 | 3 | |||
| O34328 | BSU15680 | gmk | -0.44997128938823083 | 22.222222222222225 | -0.8765038844726228 | 21.875000000000004 | 4 | 4 | 3 | 3 | 1 | ||||||
| O34334 | BSU12410 | yjoA | -0.4127383831892556 | 17.834394904458602 | -0.2765910422854952 | 8.24742268041237 | -0.46601232394032954 | 45.11278195488722 | 8 | 9 | 9 | 9 | 7 | 9 | |||
| O34340 | BSU11340 | fabF | -1.7531628216940074 | 11.290322580645162 | -1.9223075740857476 | 45.16129032258065 | -1.638651710079678 | 8.474576271186441 | 11 | 11 | 10 | 10 | 8 | 11 | |||
| O34344 | BSU33770 | sdpC | -0.4641851486079316 | 14.468851628239573 | -0.3425253124702716 | 11.886842907811838 | -0.48787175790406895 | 8.396946564885496 | 2 | 4 | 3 | 5 | 3 | 3 | |||
| O34347 | BSU29450 | argG | off | -6.64385619 | 0 | 3 | 4 | ||||||||||
| O34348 | BSU07520 | yfmC | 1.0409476647795533 | 21.164021164021165 | 3 | 2 | 4 | ||||||||||
| O34357 | BSU29840 | ytpP | 1.1756727667927678 | 28.62504559984089 | 3 | 3 | 2 | 4 | |||||||||
| O34364 | BSU02840 | ycdG | on | 6.64385619 | 0 | on | 6.64385619 | 0 | on | 6.64385619 | 0 | 8 | 9 | 2 | 2 | 2 | 2 |
| O34365 | BSU30570 | ytmB | 0.0423593528019717 | 10.743801652892563 | 2 | 2 | 2 | 3 |
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| SWISS-PROT-ID | Swiss-Prot-Number | ||||||||
| BSU-NUM | BSU number | ||||||||
| LOCUS | gene name | ||||||||
| on/off | proteins, which were assigned to be on (only N14-spectra were available) or off (only N15 (standard) -spectra were available). On/off-proteins will get a (manual) ratio of 6.64385619 (on, log2(100)) and -6.64385619 (off, log2(0.01)), respectivly. | ||||||||
| Ratio | average ratio of peak areas of native peptides (14N) to labeled standard peptides (15N), ratio is log2 and corrected | ||||||||
| %SD | percentual standard deviation of ratios of different peptides of the same protein, percentage was calculated from the average | ||||||||
| Q_Peptides | Number of peptides used for calculation of ratio | ||||||||
| I_Peptides | Number of peptides used for odentification of protein | ||||||||
| For empty cells no value is available | |||||||||
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| Project | Sample ID | Sample | Sample | SEEK STRAIN ID | Treatment 1 | Treatment 2 | Treatment 3 | Treatment 4 | Cell culture ID | Cell culture Type | Cell culture | Cell culture | Sample | Sample | Sample | |||||||
| name | (unique in whole BaCell, to use in all data sheets with measurements) | lab_internal_number | Organism_part | growhth rate | concentration | concentration | concentration | lab_internal_number | Sampling date | Age_at_sampling_hours | comments | |||||||||||
| Sample Name | Strain | NaCl | Glycine betaine | Glucose | Culture description | Culture_start_date | Creator | Date_at_sampling | Age_at_sampling_hours | Description | ||||||||||||
| project | organism/cell part | value | Unit | value | Unit | value | Unit | value | Unit | date | hour | |||||||||||
| BaCell | Exp_Br1 | Exp_Br1 | whole cell | 27 | µmax | /hour | 0 | M | 0 | mM | 1 | g/l | C-limitation_chemostat | Chemostat | Praveen Kumar Sappa | |||||||
| BaCell | Exp_Br2 | Exp_Br2 | whole cell | 27 | µmax | /hour | 0 | M | 0 | mM | 1 | g/l | C-limitation_chemostat | Chemostat | Praveen Kumar Sappa | |||||||
| BaCell | Exp_Br3 | Exp_Br3 | whole cell | 27 | µmax | /hour | 0 | M | 0 | mM | 1 | g/l | C-limitation_chemostat | Chemostat | Praveen Kumar Sappa | |||||||
| BaCell | Exp_Br4 C13-labeled | Exp_Br4 C13-labeled | whole cell | 27 | µmax | /hour | 0 | M | 0 | mM | 1 | g/l | C-limitation_chemostat | Chemostat | Praveen Kumar Sappa | chemostat with C13 glucose for analysis of metabolic fluxes | ||||||
| BaCell | µ=0.4_Br1 | µ=0.4_Br1 | whole cell | 27 | 0.4 | /hour | 0 | M | 0 | mM | 1 | g/l | C-limitation_chemostat | Chemostat | Praveen Kumar Sappa | |||||||
| BaCell | µ=0.4_Br2 | µ=0.4_Br2 | whole cell | 27 | 0.4 | /hour | 0 | M | 0 | mM | 1 | g/l | C-limitation_chemostat | Chemostat | Praveen Kumar Sappa | |||||||
| BaCell | µ=0.4_Br3 | µ=0.4_Br3 | whole cell | 27 | 0.4 | /hour | 0 | M | 0 | mM | 1 | g/l | C-limitation_chemostat | Chemostat | Praveen Kumar Sappa | |||||||
| BaCell | µ=0.4_Br4 C13-labeled | µ=0.4_Br4 C13-labeled | whole cell | 27 | 0.4 | /hour | 0 | M | 0 | mM | 1 | g/l | C-limitation_chemostat | Chemostat | Praveen Kumar Sappa | chemostat with C13 glucose for analysis of metabolic fluxes | ||||||
| BaCell | µ=0.1_Br1 | µ=0.1_Br1 | whole cell | 27 | 0.1 | /hour | 0 | M | 0 | mM | 1 | g/l | C-limitation_chemostat | Chemostat | Praveen Kumar Sappa | |||||||
| BaCell | µ=0.1_Br2 | µ=0.1_Br2 | whole cell | 27 | 0.1 | /hour | 0 | M | 0 | mM | 1 | g/l | C-limitation_chemostat | Chemostat | Praveen Kumar Sappa | |||||||
| BaCell | µ=0.1_Br3 | µ=0.1_Br3 | whole cell | 27 | 0.1 | /hour | 0 | M | 0 | mM | 1 | g/l | C-limitation_chemostat | Chemostat | Praveen Kumar Sappa | |||||||
| BaCell | µ=0.1_Br4 C13-labeled | µ=0.1_Br4 C13-labeled | whole cell | 27 | 0.1 | /hour | 0 | M | 0 | mM | 1 | g/l | C-limitation_chemostat | Chemostat | Praveen Kumar Sappa | chemostat with C13 glucose for analysis of metabolic fluxes | ||||||
| BaCell | µ=0.1_NaC-GB_Br1 | µ=0.1_NaCl-GB_Br1 | whole cell | 27 | 0.1 | /hour | 1.2 | M | 0 | mM | 1 | g/l | C-limitation_chemostat | Chemostat | Praveen Kumar Sappa | |||||||
| BaCell | µ=0.1_NaC-GB_Br2 | µ=0.1_NaCl-GB_Br2 | whole cell | 27 | 0.1 | /hour | 1.2 | M | 0 | mM | 1 | g/l | C-limitation_chemostat | Chemostat | Praveen Kumar Sappa | |||||||
| BaCell | µ=0.1_NaC-GB_Br3 | µ=0.1_NaCl-GB_Br3 | whole cell | 27 | 0.1 | /hour | 1.2 | M | 0 | mM | 1 | g/l | C-limitation_chemostat | Chemostat | Praveen Kumar Sappa | |||||||
| BaCell | µ=0.1_NaC-GB_Br4 C13-labeled | µ=0.1_NaC-GB_Br4 C13-labeled | whole cell | 27 | 0.1 | /hour | 1.2 | M | 0 | mM | 1 | g/l | C-limitation_chemostat | Chemostat | Praveen Kumar Sappa | chemostat with C13 glucose for analysis of metabolic fluxes | ||||||
| BaCell | µ=0.1_NaC+GB_Br1 | µ=0.1_NaCl+GB_Br1 | whole cell | 27 | 0.1 | /hour | 1.2 | M | 100 | mM | 1 | g/l | C-limitation_chemostat | Chemostat | Praveen Kumar Sappa | |||||||
| BaCell | µ=0.1_NaC+GB_Br2 | µ=0.1_NaCl+GB_Br2 | whole cell | 27 | 0.1 | /hour | 1.2 | M | 100 | mM | 1 | g/l | C-limitation_chemostat | Chemostat | Praveen Kumar Sappa | |||||||
| BaCell | µ=0.1_NaC+GB_Br3 | µ=0.1_NaCl+GB_Br3 | whole cell | 27 | 0.1 | /hour | 1.2 | M | 100 | mM | 1 | g/l | C-limitation_chemostat | Chemostat | Praveen Kumar Sappa | |||||||
| BaCell | µ=0.1_NaC+GB_Br4 C13-labeled | µ=0.1_NaC+GB_Br4 C13-labeled | whole cell | 27 | 0.1 | /hour | 1.2 | M | 100 | mM | 1 | g/l | C-limitation_chemostat | Chemostat | Praveen Kumar Sappa | chemostat with C13 glucose for analysis of metabolic fluxes | ||||||
