Selected Cell
Cell:
Value:
Read me_data
Transcriptome_data
Read me_amounts
1. Array
2. Array
3. Array
4. Array
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Description: | This data-sheet reflects the transcriptome of C. acetobutylicum concerning the comparison of acidogenesis to solventogenesis. Genes with average fold regulation > 1.0 (significant > 3.0) showed elevated transcript level in the acidogenesis (pH 5.7) or repressed transcript level in the solventogenesis (pH 4.5), respectively. Genes were figured out as significant induced, if the average fold regulation was > 3.0 and at least three out of four micro arrays were > 2.0.Furthermore, genes with fold regulation < 1.0 (significant < 0.33) showed elevated transcript level in the solventogenesis (pH 4.5) or repressed transcript level in the acidogenesis (pH 5.7), respectively. Genes were figured out as significant induced, if the average fold regulation was < 0.33 and at least three out of four micro arrays were < 0.5. | ||||||||
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CAC0632 | Predicted phosphatase | 0.973 | 0.8741258741258741 | 0.526 | 0.3844675124951942 | 0.689398346655267 | 0.2794255956401173 | ||
CAC0633 | Predicted phosphatase | 1.036 | 1.0845986984815619 | 0.366 | 0.29197080291970806 | 0.6946423753503175 | 0.42376926425282874 | ||
CAC0634 | Predicted membrane protein | 0.373 | 0.3467406380027739 | 1.0065 | 0.9852216748768474 | 0.6778655782199053 | 0.367448454502163 | ||
CAC0635 | Zinc finger domain | 1.0815000000000001 | 0.7462686567164178 | 1.817 | 0.5861664712778429 | 1.0577337819985653 | 0.5466370751311124 | ||
CAC0636 | Signal transduction protein containing diguanilate cyclase/phosphodiesterase domain (GGDEF) | 1.5394999999999999 | 1.4174344436569808 | 3.6470000000000002 | 2.094240837696335 | 2.174543820338329 | 1.0248692651673117 | ||
CAC0637 | tyrS tyrosyl-tRNA synthetase | 1.3865 | 1.2055455093429779 | 3.1885 | 2.2123893805309733 | 1.998233722468488 | 0.906489420372564 | ||
CAC0638 | hypothetical protein | 1.6995 | 1.303780964797914 | 1.877 | 1.5625 | 1.6106952411994784 | 0.2417461920270888 | ||
CAC0639 | Flagellar biosynthesis related protein | 1.2495 | 1.1594202898550725 | 2.6985 | 1.8099547511312217 | 1.7293437602465735 | 0.7073011487937958 | ||
CAC0640 | Predicted phoshohydrolase | 1.289 | 1.0672358591248665 | 2.3865 | 2.0242914979757085 | 1.6917568392751436 | 0.6179231033178351 | ||
CAC0641 | hypothetical protein | 0.7535000000000001 | 0.8528784648187633 | 1.605 | 1.7889087656529519 | 1.2500718076179287 | 0.5230249837171438 | ||
CAC0642 | Conserved domain seen in the bacterial SpoT | 0.763 | 0.9062075215224287 | 2.0255 | 1.6934801016088061 | 1.3470469057828087 | 0.60985372866304 | ||
CAC0644 | gerKA Spore germination protein gerKA | 1.4535 | 1.2077294685990336 | 1.57 | 1.4104098228663446 | 0.18493933330809134 | |||
CAC0645 | Similar to spore germination protein | 1.0964999999999998 | 1.108647450110865 | 0.881 | 1.0287158167036214 | 0.12806975448700864 | |||
CAC0646 | leuS leucyl-tRNA synthetase | 0.6315 | 0.8136696501220504 | 1.6564999999999999 | 1.635322976287817 | 1.1842481566024667 | 0.538315041166794 | ||
CAC0647 | Predicted membrane protein | 1.283 | 1.260239445494644 | 0.5475 | 1.0302464818315478 | 0.41822557908490116 | |||
CAC0648 | Molecular chaperone, DnaJ family (contain C-term, Zn finger domain) | 0.8280000000000001 | 1.2026458208057726 | 0.5375 | 0.7984031936127745 | 0.8416372536046368 | 0.27378934314057657 | ||
CAC0649 | Uncharacterized protein, homolog of Thermotoga maritima (4982386) | 1.2115 | 1.1675423234092235 | 1.5259999999999998 | 1.1574074074074074 | 1.2656124327041578 | 0.1751722147031295 | ||
CAC0650 | Adenilate cyclase, class2 (thermophilic) | 1.044 | 1.1135857461024499 | 1.1435 | 1.231527093596059 | 1.1331532099246273 | 0.07770812384334894 | ||
CAC0651 | hypothetical protein | 1.0015 | 0.8691873098652759 | 1.465 | 0.7892659826361484 | 1.0312383231253561 | 0.3021283969042821 | ||
CAC0652 | Uncharacterized conserved membrane protein, similar to MDR (VANZ) ORF of Enterococcus | 1.211 | 0.8061265618702137 | 0.909 | 0.6990562740300594 | 0.9062957089750683 | 0.2204798249175305 | ||
CAC0653 | Response regulator (CheY-like receiver domain and HTH DNA binding domain) | 0.8065 | 0.6956521739130435 | 1.5875 | 0.9385265133740027 | 1.0070446718217614 | 0.39950243186473355 | ||
CAC0654 | Sensory transduction histidine kinase | 0.968 | 0.8100445524503846 | 1.6185 | 1.619433198380567 | 1.2539944377077379 | 0.42633871970686826 | ||
CAC0657 | Predicted transposase (5' fragment) | 1.3335 | 1.2453300124533 | 1.162 | 1.303780964797914 | 1.2611527443128034 | 0.0755709735622831 | ||
CAC0658 | Fe-S oxidoreductase | 0.4265 | 0.3624501631025734 | 2.863 | 1.551590380139643 | 1.300885135810554 | 1.175906109089722 | ||
CAC0659 | Predicted Zn-dependent peptidase | 0.5185 | 0.42625745950554134 | 1.83 | 1.4357501794687726 | 1.0526269097435785 | 0.6901020709922719 | ||
CAC0660 | Hypothetical protein, CF-26 family | 0.6695 | 0.68259385665529 | 0.551 | 0.7429420505200593 | 0.6615089767938374 | 0.08031605912305557 | ||
CAC0662 | Sugar ABC transporter, periplasmic sugar-bindind protein | 0.5145 | 0.46072333563695 | 1.2155 | 0.4926108374384236 | 0.6708335432688434 | 0.36378169189029586 | ||
CAC0663 | hypothetical protein | 0.562 | 0.44081992506061274 | 1.5155 | 0.5376344086021506 | 0.7639885834156909 | 0.5037337230737989 | ||
CAC0664 | Sugar-binding periplasmic protein | 0.42200000000000004 | 0.4662004662004662 | 0.5309999999999999 | 0.5242463958060289 | 0.4858617155016238 | 0.05156139331069358 | ||
CAC0665 | ABC-type sugar transport system, permease component | 0.533 | 0.4629629629629629 | 0.679 | 0.3793626707132018 | 0.5135814084190412 | 0.12690848239493321 | ||
CAC0666 | Sugar permease | 0.5555 | 0.5181347150259068 | 0.8694999999999999 | 0.4275331338178709 | 0.5926669622109444 | 0.1922170223486212 | ||
CAC0667 | Sugar-binding periplasmic protein | 0.5175 | 0.49200492004920043 | 0.7025 | 0.5254860746190226 | 0.5593727486670557 | 0.09648051299922523 | ||
CAC0668 | Predicted membrane protein | 0.632 | 0.48007681228996635 | 0.532 | 0.6049606775559588 | 0.5622593724614813 | 0.06917793339002798 | ||
CAC0669 | hypothetical protein | 0.4205 | 0.457351932311914 | 0.42400000000000004 | 0.5181347150259068 | 0.4549966618344552 | 0.045250317797885874 | ||
CAC0672 | Fision threonyl-tRNA synthetase (N-terminal part) and uridine kinase | 0.9630000000000001 | 0.8382229673093042 | 0.9017132551848512 | 0.9009787408313853 | 0.06239175911348595 | |||
CAC0673 | L-serine dehydratase, beta chain | 1.2494999999999998 | 0.9302325581395349 | 1.6735 | 0.7501875468867216 | 1.150855026256564 | 0.4050091776271879 | ||
CAC0674 | L-serine dehydratase, alpha chain | 1.0765 | 0.9629272989889264 | 1.196 | 0.7971303308090871 | 1.0081394074495034 | 0.1698369198411333 | ||
CAC0675 | hypothetical protein | 1.0845 | 1.1273957158962795 | 1.041 | 0.9195402298850576 | 1.0431089864453342 | 0.0896124139210982 | ||
CAC0676 | pssA Phosphatidylserine synthase | 0.99 | 0.9940357852882704 | 0.3575 | 0.3236245954692557 | 0.6662900951893815 | 0.37637583496482485 | ||
CAC0677 | hypothetical protein | 1.1320000000000001 | 1.1129660545353366 | 1.2755 | 0.8908685968819599 | 1.1028336628543243 | 0.15884604051265638 | ||
CAC0678 | CBS domains | 1.46 | 1.3550135501355014 | 1.303 | 1.682085786375105 | 1.4500248341276516 | 0.16792382740226414 | ||
CAC0679 | Unsharacterized protein, BmrU family | 1.1955 | 0.8103727714748784 | 1.806 | 1.0136847440446022 | 1.20638937887987 | 0.42957952510177977 | ||
CAC0680 | Predicted membrane protein | 0.883 | 1.0887316276537833 | 0.52 | 0.5765350245027385 | 0.7670666630391305 | 0.2672409208611098 | ||
CAC0681 | nrgB Nitrogen regulatory protein PII, gene nrgB | 1.1275 | 1.015228426395939 | 1.2025 | 0.9195402298850576 | 1.066192164070249 | 0.12442208973253925 | ||
CAC0682 | nrgA Ammonium transporter (membrane protein nrgA) | 1.4769999999999999 | 1.343183344526528 | 0.911 | 0.6480881399870383 | 1.0948178711283916 | 0.3834514530058594 | ||
CAC0683 | hypothetical protein | 2.4130000000000003 | 1.947419668938656 | 1.2235 | 0.864677907479464 | 1.61214939410453 | 0.6984577832639083 | ||
CAC0684 | CBS domains | 2.4175 | 2.280501710376283 | 0.906 | 0.8557980316645273 | 1.6149499355102024 | 0.849699436116953 | ||
CAC0685 | Putative Mn transporter, NRAMP family | 1.7040000000000002 | 1.9138755980861246 | 0.4375 | 0.40633888663145057 | 1.1154286211793938 | 0.8054665956147725 | ||
CAC0686 | Spore cortex-lytic enzyme prepeptide, peptodoglycan-binding domain | 1.4035000000000002 | 1.3623978201634879 | 1.3780000000000001 | 1.0075566750629723 | 1.287863623806615 | 0.18763765591599796 | ||
CAC0687 | cysE Serine acetyltransferase | 1.681 | 1.7482517482517481 | 0.6775 | 0.44832997085855186 | 1.1387704297775751 | 0.6720512929561527 | ||
CAC0688 | 1-acyl-sn-glycerol-3-phosphate acyltransferase | 1.085 | 1.100715465052284 | 1.483 | 0.7042253521126761 | 1.09323520429124 | 0.31799844546614314 | ||
CAC0689 | ntH Predicted endonuclease, gene nth | 1 | 0.9078529278256922 | 1.3780000000000001 | 0.794912559618442 | 1.0201913718610336 | 0.2528538280786179 | ||
CAC0690 | Endoglucanase, aminopeptidase M42 family | 1.1484999999999999 | 0.9799118079372857 | 1.6725 | 0.9732360097323602 | 1.1935369544174117 | 0.32944505648879896 | ||
CAC0691 | Uncharacterized conserved protein, VanW of Enterococcus faecalis related | 0.735 | 0.8460236886632826 | 0.812 | 0.723589001447178 | 0.7791531725276151 | 0.05940667682834273 | ||
CAC0693 | Transcriptional regulator of the LacI family | 1.1425 | 1.2353304508956147 | 1.4140000000000001 | 1.309757694826457 | 1.275397036430518 | 0.11497592490616636 | ||
CAC0694 | Permease of the Na+ galactoside symporter family | 1.047 | 1.098297638660077 | 2.802 | 1.6611295681063123 | 1.6521068016915972 | 0.8155150945549302 | ||
CAC0695 | tagaturonate reductase | 0.899 | 0.8090614886731392 | 1.353 | 1.0010010010010009 | 1.0155156224185349 | 0.23826146628902223 | ||
CAC0698 | Predicted hydrolase of the HAD superfamily | 1.3 | 0.9891196834817012 | 2.9445 | 1.9342359767891681 | 1.7919639150677174 | 0.8631662876752473 | ||
CAC0699 | Spore photoproduct lyase, splB | 1.1275 | 1.0834236186348862 | 2.3545 | 2.0060180541624875 | 1.6428604181993434 | 0.6368883356594719 | ||
CAC0700 | cspR Predicted tRNA-methylase (SpoU class) | 1.161 | 1.0141987829614605 | 2.125 | 1.5082956259426847 | 1.4521236022260364 | 0.4941150480170458 | ||
CAC0701 | Uncharacterised protein, DegV family | 1.045 | 0.9119927040583677 | 1.909 | 1.5267175572519083 | 1.348177565327569 | 0.4577379895626761 | ||
CAC0702 | Predicted lipoprotein, Med/BMP family | 0.6145 | 0.657030223390276 | 2.21 | 1.448225923244026 | 1.2324390366585756 | 0.7561158140753783 | ||
CAC0703 | Sugar ABC-transporter, ATP-ase component | 0.7915000000000001 | 0.7639419404125285 | 1.4285 | 0.7677543186180422 | 0.9379240647576428 | 0.32727780099477094 | ||
CAC0704 | Sugar ABC transporter, permease protein | 0.7795000000000001 | 0.7044734061289186 | 1.0295 | 0.8783487044356609 | 0.8479555276411449 | 0.14042248051029746 | ||
CAC0705 | Sugar ABC transporter, permease protein | 0.748 | 0.631911532385466 | 1.092 | 0.7034822370735139 | 0.7938484423647449 | 0.20443910654925784 | ||
CAC0706 | Endo-1,4-beta glucanase (fused to two ricin-B-like domains) | 1.837 | 1.9342359767891681 | 3.32 | 2.363745325596389 | 0.8295667306097827 | |||
CAC0707 | rpoN DNA-directed RNA polymerase subunit N | 1.921 | 1.8231540565177757 | 11.689 | 5.089058524173028 | 5.130553145172701 | 4.627996941604052 | ||
CAC0708 | Putative transcriptional regulator | 1.084 | 1.002004008016032 | 3.0675 | 2.58732212160414 | 1.9352065324050431 | 1.0492477862369998 | ||
CAC0709 | gapC Glyceraldehyde 3-phosphate dehydrogenase, gene gapC | 0.999 | 0.9128251939753538 | 1.928 | 1.8814675446848539 | 1.430323184665052 | 0.5492592909537626 | ||
CAC0710 | pgk phosphoglycerate kinase | 1.4555 | 1.409443269908386 | 2.5375 | 1.8165304268846503 | 1.8047434241982592 | 0.5213138255537136 | ||
CAC0711 | tpi triosephosphate isomerase | 1.1665 | 0.8267879288962381 | 3.3625 | 1.7421602787456447 | 1.7744870519104705 | 1.1240717691523647 | ||
CAC0712 | pgm phosphoglyceromutase | 0.6835 | 0.6693440428380187 | 2.9165 | 1.7406440382941688 | 1.5024970202830468 | 1.0678667881800676 | ||
CAC0713 | eno phosphopyruvate hydratase | 0.9065000000000001 | 0.8084074373484236 | 2.826 | 1.6181229773462784 | 1.5397576036736755 | 0.9303133687621304 | ||
CAC0714 | secG Membrane protein secG involved in protein secretion | 0.6605000000000001 | 0.6589785831960461 | 0.717 | 0.6051437216338881 | 0.6604055762074836 | 0.04567583825257766 | ||
CAC0715 | vacB FUSION ribonuclease and ribosomal protein S1 domain | 1.1625 | 0.946073793755913 | 2.169 | 1.4144271570014144 | 1.4230002376893318 | 0.5328878399310777 | ||
CAC0716 | smpB SsrA-binding protein | 1.1595 | 0.9306654257794322 | 2.3920000000000003 | 1.1730205278592374 | 1.4137964884096674 | 0.6615480584614516 | ||
CAC0717 | Predicted membrane protein | 0.104 | 0.12308449750753893 | 0.14700000000000002 | 0.09928514694201748 | 0.1183424111123891 | 0.021699684010038064 | ||
CAC0718 | Ortholog ycnD B,subtilis, nitroreductase | 2.4175 | 1.9900497512437814 | 4.2940000000000005 | 2.684563758389262 | 2.846528377408261 | 1.0064835851816794 | ||
CAC0719 | Epoxide hydrolase, similar to eukaryotic | 1.2494999999999998 | 1.1806375442739079 | 0.7190000000000001 | 0.6594131223211342 | 0.9521376666487606 | 0.3058743651855802 | ||
CAC0720 | hypothetical protein | 1.018 | 0.8857395925597874 | 1.347 | 1.267427122940431 | 1.1295416788750545 | 0.2146171168457362 | ||
CAC0725 | Predicted membrane protein, CF-9 family | 1.353 | 1.364256480218281 | 0.589 | 0.6445375443119562 | 0.9876985061325593 | 0.42893707144494725 | ||
CAC0727 | yifK Amino acid permease, gene yifK | 1.1215 | 1.1363636363636365 | 0.5585 | 0.4356349379220214 | 0.8129996435714144 | 0.36828925742271423 | ||
CAC0728 | SAM-dependent methyltransferase | 0.9495 | 0.8403361344537815 | 0.598 | 0.630715862503942 | 0.7546379992394309 | 0.16853044086895239 | ||
CAC0729 | hypothetical protein | 0.9085000000000001 | 0.7137758743754462 | 1.1044999999999998 | 0.7686395080707148 | 0.8738538456115402 | 0.1742536639952538 | ||
CAC0730 | Predicted permease | 1.436 | 1.2091898428053205 | 0.512 | 0.693000693000693 | 0.9625476339515033 | 0.43229551849803205 | ||
CAC0736 | Possible glucanotransferase (putative endo alpha-1,4 polygalactosaminidase related protein) | 0.8745 | 0.7763975155279503 | 1.6115 | 1.4684287812041115 | 1.1827065741830154 | 0.41856075828313866 | ||
CAC0738 | DNA polymerase III subunit epsilon | 1.13 | 0.9203865623561895 | 2.6870000000000003 | 1.1661807580174928 | 1.4758918300934207 | 0.8146433182667682 | ||
CAC0739 | Predicted membrane protein | 1.7975 | 1.4114326040931546 | 3.615 | 1.6877637130801686 | 2.127924079293331 | 1.0046020850966915 | ||
CAC0740 | Uncharacterized conserved protein, YlxP family | 1.3679999999999999 | 0.9237875288683602 | 0.922 | 1.0090817356205852 | 1.0557173161222364 | 0.2121172171343096 | ||
CAC0742 | Uncharacterized protein, containing predicted phosphatase domain | 2.189 | 1.7621145374449338 | 6.2795000000000005 | 3.0911901081916535 | 3.330451161409147 | 2.0426066209568727 | ||
CAC0743 | 6-phospho-beta-glucosidase | 1.455 | 1.3531799729364005 | 3.3765 | 2.1881838074398248 | 2.093215945094056 | 0.9328825744458218 | ||
CAC0744 | Na+/H+ antiporter, ortholog YQKI B,subtilis | 0.804 | 1.1043622308117063 | 0.7025 | 0.7601672367920942 | 0.84275736690095 | 0.1792879405428096 | ||
CAC0745 | Transcriptional regulator, LysR family | 0.761 | 0.7852375343541422 | 1.5430000000000001 | 1.4903129657228018 | 1.1448876250192361 | 0.4299341133520027 | ||
CAC0746 | Secreted protease metal-dependent protease | 0.1445 | 0.1510459935050223 | 0.2705 | 0.2502502502502503 | 0.20407406093881816 | 0.06558884689739623 | ||
CAC0747 | Secreted protein containing uncharacterized conserved protein of ErfK family | 1.073 | 1.0638297872340425 | 0.9 | 0.7191657677094571 | 0.9389988887358749 | 0.16671989029779763 | ||
CAC0748 | Nitroreductase family protein | 1.2165 | 0.9945300845350571 | 2.018 | 1.1574074074074074 | 1.3466093729856161 | 0.457329579229971 | ||
CAC0749 | HD hydrolase superfamily protein | 1.045 | 0.9332711152589829 | 2.3295 | 1.4705882352941175 | 1.444589837638275 | 0.6337351671718768 | ||
CAC0751 | Permease | 1.8165 | 1.7809439002671417 | 0.604 | 0.4504504504504504 | 1.162973587679398 | 0.7369135570404871 | ||
CAC0754 | hypothetical protein | 0.157 | 5.4945054945054945 | 0.22 | 1.957168498168498 | 3.063585647446605 | |||
CAC0755 | Multimeric flavodoxin WrbA family protein, diverged or disrupted | 1.0075 | 0.9975062344139651 | 1.215 | 1.3596193065941535 | 1.1449063852520296 | 0.17475895074341774 |
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Description: | The single sheets contain the transcript amount of the genes for all four microarrays (sheet 1 to 4). The first biological experiment will be represented by the 1. and 2. array. The 3. and 4. array showed the transcript level of the second biological experiment. The 1. and 3. array the cDNA of pH 4.5 was labeled by Cy3 and pH 5.7 by Cy5, respectively. The 2. and 4. array contained the transcript level of the dyeflip (pH 4.5 Cy5 / pH 5.7 Cy3). Furthermore, the 1. and 2. array were evaluated under high scanning conditions and the 3. and 4. array under low scanning conditions. | ||||||||
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1. Array (high Scan) | pH 4.5 / Cy3 | ||||||||
ORF | Name | (F 635 median - B635) - B635 SD | (F 532 median - B532) - B532 SD | pH 5.7 / Cy5 | |||||
CA_P0002 | Transglutaminase-like predicted protease domain fused ChW-repeats and cell-adhesion domain | 373.5 | 279 | ||||||
CA_P0003 | Transglutaminase-like predicted protease domain fused to ChW-repeats and cell-adhesion domain | 266 | 109 | ||||||
CA_P0004 | Cysteine protease | 415.5 | 20426.5 | ||||||
CA_P0005 | Uncharacterized protein similar to Bacteriocin immunity protein of mesC/lccI/entI family | 340.5 | 101.5 | ||||||
CA_P0006 | GntR family HTH transcriptional regulator | 1748.5 | 1721 | ||||||
CA_P0007 | hypothetical protein | 1246 | 1028 | ||||||
CA_P0009 | Response regulator (CheY + HTH domains) | 445 | 1880 | ||||||
CA_P0010 | bgla Beta_glucosidase | 660 | 2242.5 | ||||||
CA_P0012 | pedb Pediocin immunity protein, PedB | 3038 | 3942 | ||||||
CA_P0013 | FAD dependent dehydrogenase | 1007.5 | 603 | ||||||
CA_P0014 | Protein tyrosine phosphatase II superfamily protein | 1855 | 1464.5 | ||||||
CA_P0015 | GLPQ related phosphodiesterase | 3905.5 | 3969 | ||||||
CA_P0018 | hypothetical protein | 63 | 32 | ||||||
CA_P0019 | grkc Spore germination protein, GRKC | 129 | 127.5 | ||||||
CA_P0020 | grka Spore germination protein, GRKA | 168 | 213.5 | ||||||
CA_P0024 | MarR family HTH transcriptional regulator | 95 | 81 | ||||||
CA_P0025 | pdc Pyruvate decarboxylase | 5988 | 5220.5 | ||||||
CA_P0026 | hypothetical protein | 5853.5 | 5351 | ||||||
CA_P0027 | Predicted amino acid permeases | 235.5 | 219.5 | ||||||
CA_P0028 | HTH transcriptional regulator TetR family | 657 | 496 | ||||||
CA_P0031 | hlyU Transcriptional activator HLYU, HTH of ArsR family | 458.5 | 346 | ||||||
CA_P0032 | Rhodanese-like domain | 257.5 | 247 | ||||||
CA_P0033 | hypothetical protein | 411.5 | 417.5 | ||||||
CA_P0034 | Rhodanese-like domain | 2115 | 2481 | ||||||
CA_P0035 | adhe Aldehyde-alcohol dehydrogenase, ADHE1 | 2648.5 | 850.5 | ||||||
CA_P0036 | Uncharacterized, ortholog of YgaT gene of B,subtillis | 46107.5 | 445 | ||||||
CA_P0037 | Uncharacterized, ortholog of YgaS gene of B,subtillis | 46444.5 | 354.5 | ||||||
CA_P0038 | Uncharacterized conserved protein, YCII family | 988.5 | 178.5 | ||||||
CA_P0040 | Xre family DNA-binding domain and TPR repeats containing protein | 403 | 1927.5 | ||||||
CA_P0044 | hypothetical protein | 208 | 1194.5 | ||||||
CA_P0045 | Glycosyl transferase | 356.5 | 1915 | ||||||
CA_P0046 | TetR family HTH transcriptional regulator | 78 | 135 | ||||||
CA_P0047 | Sulphohydrolase/Glycosulfatase, Zn-dependent hydrolase | 107 | 70 | ||||||
CA_P0048 | Related to methyl-accepting chemotaxis protein | 1133.5 | 688.5 | ||||||
CA_P0049 | Permease, MDR related | 166 | 147 | ||||||
CA_P0050 | pnba Para-nitrobenzyl esterase, a/b hydrolase | 1928.5 | 1907 | ||||||
CA_P0052 | MarR family HTH transcriptional regulator | 473.5 | 317 | ||||||
CA_P0053 | xynb Xylanase, glycosyl hydrolase family 10 | 311.5 | 5611 | ||||||
CA_P0054 | Xylanase/chitin deacetylase family enzyme | 439 | 7819.5 | ||||||
CA_P0055 | hypothetical protein | 294.5 | 241 | ||||||
CA_P0056 | pell Pectate lyase, secreted, polysaccharide lyase family | 434 | 4597 | ||||||
CA_P0057 | Putative glycoportein or S-layer protein | 684.5 | 1091.5 | ||||||
CA_P0058 | Rare lipoprotein A RLPA releated protein | 11422 | 9077.5 | ||||||
CA_P0059 | Alcohol dehydrogenase | 1053 | 982 | ||||||
CA_P0062 | Hypothetical protein, CF-18 family | 138.5 | 69 | ||||||
CA_P0064 | alf Fructose-bisphosphate aldolase class I | 85.5 | 76 | ||||||
CA_P0065 | Predicted secreted metalloprotease | 310 | 4875 | ||||||
CA_P0066 | ptna Mannose-specific phosphotransferase system component IIAB | 104.5 | 15 | ||||||
CA_P0067 | manY/levF Mannose/fructose-specific phosphotransferase system component IIC | 204 | 52 | ||||||
CA_P0072 | hypothetical protein | 5976.5 | 2992.5 | ||||||
CA_P0073 | ABC ATPase containing transporter | 2071.5 | 725 | ||||||
CA_P0074 | hypothetical protein | 1774 | 546 | ||||||
CA_P0076 | penicillin binding protein 1A | 928 | 564.5 | ||||||
CA_P0077 | Uncharacterized Fe-S protein | 142.5 | 71.5 | ||||||
CA_P0079 | thlr ThlR, HTH transcriptional regulator TetR/AcrR family | 2049.5 | 1822.5 | ||||||
CA_P0080 | Site-Specific Recombinase, Xerd | 292.5 | 297.5 | ||||||
CA_P0081 | TnpR resolvase C-terminal fragment | 224 | 161.5 | ||||||
CA_P0082 | crp CRP (cyclic AMP receptor protein) regulatory protein | 722.5 | 711.5 | ||||||
CA_P0083 | SAM-dependent methyltransferase | 1307.5 | 605 | ||||||
CA_P0084 | hypothetical protein | 1124 | 831 | ||||||
CA_P0085 | Hypothetical secreted protein (fragment) | 631.5 | 489 | ||||||
CA_P0086 | Permease, MDR related, probably tetracycline resistance protein | 635.5 | 606.5 | ||||||
CA_P0087 | HTH transcriptional regulator TetR/AcrR family | 3898.5 | 2437.5 | ||||||
CA_P0088 | abf 3-oxoacyl-acyl-carrier protein synthase | 1694 | 1179.5 | ||||||
CA_P0089 | Predicted membrane protein | 158 | 86 | ||||||
CA_P0090 | ABC-type transporter, ATPase component | 330 | 239 | ||||||
CA_P0091 | Predicted regulator of stationary/sporulation gene expression | 1641.5 | 1946 | ||||||
CA_P0093 | tnpa TnpA, transposase (3' segment) | 427.5 | 420.5 | ||||||
CA_P0094 | TnpA, transposase (5' segment) | 589.5 | 522.5 | ||||||
CA_P0096 | ipyr Inorganic pyrophosphatase | 820.5 | 1010.5 | ||||||
CA_P0097 | lipg Carboxyl esterase, a/b hydrolase | 2128 | 2506 | ||||||
CA_P0098 | amyA alpha-amylase | 295.5 | 261.5 | ||||||
CA_P0099 | muts DNA mismatch repair protein, MUTS fragment | 234 | 182.5 | ||||||
CA_P0100 | HTH transcriptional regulator TetR/AcrR family | 638 | 838 | ||||||
CA_P0101 | hypothetical protein | 742 | 1077.5 | ||||||
CA_P0102 | Membrane protein | 891.5 | 8260.5 | ||||||
CA_P0103 | arsr Transcriptional regulator HTH-type, ArsR family | 426 | 516 | ||||||
CA_P0104 | arsb Heavy metal resistance membrane protein | 212 | 334 | ||||||
CA_P0105 | arsc Arsenate reductase, arsC, protein-tyrosine-phosphatase family enzyme | 259 | 556 | ||||||
CA_P0107 | HTH transcriptional regulator MerR family | 301.5 | 233.5 | ||||||
CA_P0108 | Predicted HTH containing transcriptional regulator | 861 | 780 | ||||||
CA_P0110 | NH2-acetyltransferase | 372.5 | 235 | ||||||
CA_P0111 | NH2-acetyltransferase | 167 | 37 | ||||||
CA_P0112 | hypothetical protein | 3320.5 | 12481.5 | ||||||
CA_P0113 | Solo B3/4 domain (OB-fold DNA/RNA-binding) of Phe-aaRS-beta | 3682 | 3518.5 | ||||||
CA_P0114 | Possible beta-xylosidase, family 43 of glycosyl hydrolases | 97 | 252.5 | ||||||
CA_P0115 | xynD Endo-1,4-beta-xylanase XynD B,subtilis ortholog (family 43 glycosyl hydrolase and cellulose-binding domain) | 3 | 99 | ||||||
CA_P0116 | Xylanase, glycosyl hydrolase family 10 | 253.5 | 1616 | ||||||
CA_P0117 | Possible beta-xylosidase diverged, family 5/39 of glycosyl hydrolases and alpha-amylase C (Greek key) C-terminal domain | 181.5 | 1570.5 | ||||||
CA_P0118 | Possible xylan degradation enzyme (glycosyl hydrolase family 30-like domain and Ricin B-like domain) | 194 | 1459 | ||||||
CA_P0119 | Possible xylan degradation enzyme (glycosyl hydrolase family 30-like domain and Ricin B-like domain) | 78 | 1033.5 | ||||||
CA_P0120 | Possible xylan degradation enzyme (glycosyl hydrolase family 43-like domain, cellulose-binding domain and Ricin B-like domain) | 96 | 1150.5 | ||||||
CA_P0121 | Leu-rich protein family protein, YaeG (E,coli) homolog | 23 | 67 | ||||||
CA_P0123 | hypothetical protein | 597.5 | 758.5 | ||||||
CA_P0124 | Permease, MDR related, probably tetracycline resistance protein | 1910 | 2061.5 | ||||||
CA_P0125 | hypothetical protein | 1040 | 703.5 | ||||||
CA_P0126 | Uncharacterized protein (NN,term domain homologous to B,subtilis (gi|833839) | 2070 | 1554 | ||||||
CA_P0127 | HTH transcriptional regulator TetR family | 393 | 205 |
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2. array (high scan) | pH 4.5 / Cy5 | ||||||||||
ORF | Name | (F 635 median - B635) - B635 SD | (F 532 median - B532) - B532 SD | pH 5.7 / Cy3 | |||||||
CA_P0001 | Oxidoreductase | 89 | 117 | ||||||||
CA_P0002 | Transglutaminase-like predicted protease domain fused ChW-repeats and cell-adhesion domain | 279 | 286 | ||||||||
CA_P0003 | Transglutaminase-like predicted protease domain fused to ChW-repeats and cell-adhesion domain | 155.5 | 237.5 | ||||||||
CA_P0004 | Cysteine protease | 16476 | 271 | ||||||||
CA_P0005 | Uncharacterized protein similar to Bacteriocin immunity protein of mesC/lccI/entI family | 162.5 | 229.5 | ||||||||
CA_P0006 | GntR family HTH transcriptional regulator | 1599 | 1544 | ||||||||
CA_P0007 | hypothetical protein | 957.5 | 1054 | ||||||||
CA_P0009 | Response regulator (CheY + HTH domains) | 3064 | 814.5 | ||||||||
CA_P0010 | bgla Beta_glucosidase | 2148.5 | 642.5 | ||||||||
CA_P0012 | pedb Pediocin immunity protein, PedB | 3817.5 | 2461.5 | ||||||||
CA_P0013 | FAD dependent dehydrogenase | 664 | 744.5 | ||||||||
CA_P0014 | Protein tyrosine phosphatase II superfamily protein | 1588 | 1583.5 | ||||||||
CA_P0015 | GLPQ related phosphodiesterase | 3664 | 3275 | ||||||||
CA_P0019 | grkc Spore germination protein, GRKC | 116 | 94 | ||||||||
CA_P0020 | grka Spore germination protein, GRKA | 201 | 85 | ||||||||
CA_P0021 | hypothetical protein | 19 | 32 | ||||||||
CA_P0023 | hypothetical protein | 44 | 49 | ||||||||
CA_P0024 | MarR family HTH transcriptional regulator | 106.5 | 118 | ||||||||
CA_P0025 | pdc Pyruvate decarboxylase | 5205.5 | 5797 | ||||||||
CA_P0026 | hypothetical protein | 5122 | 5912 | ||||||||
CA_P0027 | Predicted amino acid permeases | 206.5 | 114.5 | ||||||||
CA_P0028 | HTH transcriptional regulator TetR family | 468 | 431.5 | ||||||||
CA_P0031 | hlyU Transcriptional activator HLYU, HTH of ArsR family | 406.5 | 375 | ||||||||
CA_P0032 | Rhodanese-like domain | 228.5 | 167.5 | ||||||||
CA_P0033 | hypothetical protein | 399.5 | 297 | ||||||||
CA_P0034 | Rhodanese-like domain | 2499 | 1767.5 | ||||||||
CA_P0035 | adhe Aldehyde-alcohol dehydrogenase, ADHE1 | 814.5 | 2786.5 | ||||||||
CA_P0036 | Uncharacterized, ortholog of YgaT gene of B,subtillis | 3232.5 | 60284.5 | ||||||||
CA_P0037 | Uncharacterized, ortholog of YgaS gene of B,subtillis | 1103.5 | 61929.5 | ||||||||
CA_P0038 | Uncharacterized conserved protein, YCII family | 171.5 | 622 | ||||||||
CA_P0040 | Xre family DNA-binding domain and TPR repeats containing protein | 1605.5 | 255 | ||||||||
CA_P0044 | hypothetical protein | 1393 | 187 | ||||||||
CA_P0045 | Glycosyl transferase | 1757 | 261.5 | ||||||||
CA_P0046 | TetR family HTH transcriptional regulator | 157 | 7 | ||||||||
CA_P0047 | Sulphohydrolase/Glycosulfatase, Zn-dependent hydrolase | 107 | 76.5 | ||||||||
CA_P0048 | Related to methyl-accepting chemotaxis protein | 601 | 1031.5 | ||||||||
CA_P0049 | Permease, MDR related | 211.5 | 152.5 | ||||||||
CA_P0050 | pnba Para-nitrobenzyl esterase, a/b hydrolase | 2205 | 2468 | ||||||||
CA_P0051 | Oxidoreductase | 98.5 | 62.5 | ||||||||
CA_P0052 | MarR family HTH transcriptional regulator | 259.5 | 354 | ||||||||
CA_P0053 | xynb Xylanase, glycosyl hydrolase family 10 | 4608.5 | 241.5 | ||||||||
CA_P0054 | Xylanase/chitin deacetylase family enzyme | 6967 | 350 | ||||||||
CA_P0055 | hypothetical protein | 249 | 196 | ||||||||
CA_P0056 | pell Pectate lyase, secreted, polysaccharide lyase family | 4865 | 396 | ||||||||
CA_P0057 | Putative glycoportein or S-layer protein | 1320.5 | 688 | ||||||||
CA_P0058 | Rare lipoprotein A RLPA releated protein | 8917 | 10583 | ||||||||
CA_P0059 | Alcohol dehydrogenase | 837 | 775.5 | ||||||||
CA_P0062 | Hypothetical protein, CF-18 family | 151 | 123.5 | ||||||||
CA_P0064 | alf Fructose-bisphosphate aldolase class I | 124 | 32.5 | ||||||||
CA_P0065 | Predicted secreted metalloprotease | 4264.5 | 229.5 | ||||||||
CA_P0066 | ptna Mannose-specific phosphotransferase system component IIAB | 38 | 51 | ||||||||
CA_P0067 | manY/levF Mannose/fructose-specific phosphotransferase system component IIC | 69.5 | 159.5 | ||||||||
CA_P0072 | hypothetical protein | 2581 | 5461.5 | ||||||||
CA_P0073 | ABC ATPase containing transporter | 701 | 1729.5 | ||||||||
CA_P0074 | hypothetical protein | 599.5 | 1349 | ||||||||
CA_P0076 | penicillin binding protein 1A | 530.5 | 935.5 | ||||||||
CA_P0078 | thil Acetyl coenzyme A acetyltransferase (thiolase) | 259.5 | 283.5 | ||||||||
CA_P0079 | thlr ThlR, HTH transcriptional regulator TetR/AcrR family | 1417.5 | 1399.5 | ||||||||
CA_P0080 | Site-Specific Recombinase, Xerd | 300 | 254 | ||||||||
CA_P0081 | TnpR resolvase C-terminal fragment | 136 | 109 | ||||||||
CA_P0082 | crp CRP (cyclic AMP receptor protein) regulatory protein | 740.5 | 617.5 | ||||||||
CA_P0083 | SAM-dependent methyltransferase | 708.5 | 1280.5 | ||||||||
CA_P0084 | hypothetical protein | 887.5 | 1064 | ||||||||
CA_P0085 | Hypothetical secreted protein (fragment) | 474.5 | 507 | ||||||||
CA_P0086 | Permease, MDR related, probably tetracycline resistance protein | 605.5 | 584 | ||||||||
CA_P0087 | HTH transcriptional regulator TetR/AcrR family | 2460 | 3028.5 | ||||||||
CA_P0088 | abf 3-oxoacyl-acyl-carrier protein synthase | 1536.5 | 1659.5 | ||||||||
CA_P0089 | Predicted membrane protein | 134 | 123 | ||||||||
CA_P0090 | ABC-type transporter, ATPase component | 167.5 | 214.5 | ||||||||
CA_P0091 | Predicted regulator of stationary/sporulation gene expression | 2159 | 1306 | ||||||||
CA_P0093 | tnpa TnpA, transposase (3' segment) | 385.5 | 425.5 | ||||||||
CA_P0094 | TnpA, transposase (5' segment) | 464.5 | 407.5 | ||||||||
CA_P0096 | ipyr Inorganic pyrophosphatase | 959 | 746 | ||||||||
CA_P0097 | lipg Carboxyl esterase, a/b hydrolase | 2062.5 | 1594 | ||||||||
CA_P0098 | amyA alpha-amylase | 297 | 309 | ||||||||
CA_P0099 | muts DNA mismatch repair protein, MUTS fragment | 211 | 148 | ||||||||
CA_P0100 | HTH transcriptional regulator TetR/AcrR family | 942 | 583 | ||||||||
CA_P0101 | hypothetical protein | 1041.5 | 599.5 | ||||||||
CA_P0102 | Membrane protein | 8135.5 | 733 | ||||||||
CA_P0103 | arsr Transcriptional regulator HTH-type, ArsR family | 587 | 263.5 | ||||||||
CA_P0104 | arsb Heavy metal resistance membrane protein | 468.5 | 269 | ||||||||
CA_P0105 | arsc Arsenate reductase, arsC, protein-tyrosine-phosphatase family enzyme | 463 | 214 | ||||||||
CA_P0106 | dxs 1-deoxyxylulose-5-phosphate synthase, dehydrogenase | 107 | 109 | ||||||||
CA_P0108 | Predicted HTH containing transcriptional regulator | 782.5 | 600 | ||||||||
CA_P0110 | NH2-acetyltransferase | 226 | 274 | ||||||||
CA_P0111 | NH2-acetyltransferase | 52 | 152 | ||||||||
CA_P0112 | hypothetical protein | 11961.5 | 2907 | ||||||||
CA_P0113 | Solo B3/4 domain (OB-fold DNA/RNA-binding) of Phe-aaRS-beta | 3998.5 | 2880.5 | ||||||||
CA_P0114 | Possible beta-xylosidase, family 43 of glycosyl hydrolases | 293.5 | 65 | ||||||||
CA_P0116 | Xylanase, glycosyl hydrolase family 10 | 2110.5 | 306 | ||||||||
CA_P0117 | Possible beta-xylosidase diverged, family 5/39 of glycosyl hydrolases and alpha-amylase C (Greek key) C-terminal domain | 1687 | 154 | ||||||||
CA_P0118 | Possible xylan degradation enzyme (glycosyl hydrolase family 30-like domain and Ricin B-like domain) | 1520 | 203 | ||||||||
CA_P0119 | Possible xylan degradation enzyme (glycosyl hydrolase family 30-like domain and Ricin B-like domain) | 797.5 | 16 | ||||||||
CA_P0120 | Possible xylan degradation enzyme (glycosyl hydrolase family 43-like domain, cellulose-binding domain and Ricin B-like domain) | 1005 | 35 | ||||||||
CA_P0122 | dTDP-4-keto-L-rhamnose reductase | 11 | 20 | ||||||||
CA_P0123 | hypothetical protein | 833 | 555.5 | ||||||||
CA_P0124 | Permease, MDR related, probably tetracycline resistance protein | 2063.5 | 1624 | ||||||||
CA_P0125 | hypothetical protein | 693.5 | 846.5 |
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3. array (low scan) | pH 4.5 / Cy3 | ||||||||
ORF | Name | (F 635 median - B635) - B635 SD | (F 532 median - B532) - B532 SD | pH 5.7 / Cy5 | |||||
CA_P0002 | Transglutaminase-like predicted protease domain fused ChW-repeats and cell-adhesion domain | 106.5 | 14.5 | ||||||
CA_P0003 | Transglutaminase-like predicted protease domain fused to ChW-repeats and cell-adhesion domain | 64 | 10 | ||||||
CA_P0004 | Cysteine protease | 167.5 | 4352 | ||||||
CA_P0005 | Uncharacterized protein similar to Bacteriocin immunity protein of mesC/lccI/entI family | 50 | 62.5 | ||||||
CA_P0006 | GntR family HTH transcriptional regulator | 326.5 | 314 | ||||||
CA_P0007 | hypothetical protein | 523.5 | 311 | ||||||
CA_P0009 | Response regulator (CheY + HTH domains) | 197 | 376 | ||||||
CA_P0010 | bgla Beta_glucosidase | 181 | 522.5 | ||||||
CA_P0012 | pedb Pediocin immunity protein, PedB | 1352.5 | 1527.5 | ||||||
CA_P0013 | FAD dependent dehydrogenase | 232.5 | 107.5 | ||||||
CA_P0014 | Protein tyrosine phosphatase II superfamily protein | 534 | 238.5 | ||||||
CA_P0015 | GLPQ related phosphodiesterase | 725.5 | 1011.5 | ||||||
CA_P0018 | hypothetical protein | 9 | 7 | ||||||
CA_P0019 | grkc Spore germination protein, GRKC | 22.5 | 27.5 | ||||||
CA_P0020 | grka Spore germination protein, GRKA | 52 | 85.5 | ||||||
CA_P0025 | pdc Pyruvate decarboxylase | 1341 | 601.5 | ||||||
CA_P0026 | hypothetical protein | 1107 | 650 | ||||||
CA_P0027 | Predicted amino acid permeases | 20.5 | 54 | ||||||
CA_P0028 | HTH transcriptional regulator TetR family | 130 | 41 | ||||||
CA_P0031 | hlyU Transcriptional activator HLYU, HTH of ArsR family | 107 | 77.5 | ||||||
CA_P0032 | Rhodanese-like domain | 42.5 | 10.5 | ||||||
CA_P0033 | hypothetical protein | 105 | 71 | ||||||
CA_P0034 | Rhodanese-like domain | 519 | 591 | ||||||
CA_P0035 | adhe Aldehyde-alcohol dehydrogenase, ADHE1 | 324 | 81 | ||||||
CA_P0036 | Uncharacterized, ortholog of YgaT gene of B.subtillis | 36982.5 | 101.5 | ||||||
CA_P0037 | Uncharacterized, ortholog of YgaS gene of B.subtillis | 27184.5 | 32 | ||||||
CA_P0038 | Uncharacterized conserved protein, YCII family | 153.5 | 22 | ||||||
CA_P0044 | hypothetical protein | 76.5 | 268.5 | ||||||
CA_P0045 | Glycosyl transferase | 84 | 377 | ||||||
CA_P0046 | TetR family HTH transcriptional regulator | 10 | 25 | ||||||
CA_P0047 | Sulphohydrolase/Glycosulfatase, Zn-dependent hydrolase | 31 | 19 | ||||||
CA_P0048 | Related to methyl-accepting chemotaxis protein | 248 | 125.5 | ||||||
CA_P0049 | Permease, MDR related | 33.5 | 69.5 | ||||||
CA_P0050 | pnba Para-nitrobenzyl esterase, a/b hydrolase | 471 | 327.5 | ||||||
CA_P0051 | Oxidoreductase | 37 | 32.5 | ||||||
CA_P0052 | MarR family HTH transcriptional regulator | 28 | 42 | ||||||
CA_P0053 | xynb Xylanase, glycosyl hydrolase family 10 | 102.5 | 2182 | ||||||
CA_P0054 | Xylanase/chitin deacetylase family enzyme | 150 | 2618.5 | ||||||
CA_P0055 | hypothetical protein | 102 | 218.5 | ||||||
CA_P0056 | pell Pectate lyase, secreted, polysaccharide lyase family | 140 | 904 | ||||||
CA_P0057 | Putative glycoportein or S-layer protein | 554.5 | 373.5 | ||||||
CA_P0058 | Rare lipoprotein A RLPA releated protein | 2633.5 | 1793.5 | ||||||
CA_P0059 | Alcohol dehydrogenase | 181.5 | 176 | ||||||
CA_P0061 | hypothetical protein | 18 | 11 | ||||||
CA_P0062 | Hypothetical protein, CF-18 family | 42 | 7.5 | ||||||
CA_P0065 | Predicted secreted metalloprotease | 112.5 | 1834.5 | ||||||
CA_P0066 | ptna Mannose-specific phosphotransferase system component IIAB | 46 | 6 | ||||||
CA_P0067 | manY/levF Mannose/fructose-specific phosphotransferase system component IIC | 40.5 | 7 | ||||||
CA_P0070 | HAD phosphatase superfamily protein | 5 | 16 | ||||||
CA_P0072 | hypothetical protein | 2495 | 384.5 | ||||||
CA_P0073 | ABC ATPase containing transporter | 1289.5 | 145 | ||||||
CA_P0074 | hypothetical protein | 1090.5 | 105.5 | ||||||
CA_P0076 | penicillin binding protein 1A | 320 | 106 | ||||||
CA_P0077 | Uncharacterized Fe-S protein | 4 | 2 | ||||||
CA_P0078 | thil Acetyl coenzyme A acetyltransferase (thiolase) | 66.5 | 29.5 | ||||||
CA_P0079 | thlr ThlR, HTH transcriptional regulator TetR/AcrR family | 267 | 76.5 | ||||||
CA_P0080 | Site-Specific Recombinase, Xerd | 67 | 52.5 | ||||||
CA_P0082 | crp CRP (cyclic AMP receptor protein) regulatory protein | 122.5 | 188 | ||||||
CA_P0083 | SAM-dependent methyltransferase | 365 | 90.5 | ||||||
CA_P0084 | hypothetical protein | 260 | 168.5 | ||||||
CA_P0085 | Hypothetical secreted protein (fragment) | 138.5 | 105 | ||||||
CA_P0086 | Permease, MDR related, probably tetracycline resistance protein | 296.5 | 203.5 | ||||||
CA_P0087 | HTH transcriptional regulator TetR/AcrR family | 853.5 | 930 | ||||||
CA_P0088 | abf 3-oxoacyl-acyl-carrier protein synthase | 941.5 | 1379.5 | ||||||
CA_P0089 | Predicted membrane protein | 36.5 | 80.5 | ||||||
CA_P0090 | ABC-type transporter, ATPase component | 66 | 128.5 | ||||||
CA_P0091 | Predicted regulator of stationary/sporulation gene expression | 257.5 | 291.5 | ||||||
CA_P0093 | tnpa TnpA, transposase (3' segment) | 98.5 | 66.5 | ||||||
CA_P0094 | TnpA, transposase (5' segment) | 104.5 | 29 | ||||||
CA_P0096 | ipyr Inorganic pyrophosphatase | 204 | 129 | ||||||
CA_P0097 | lipg Carboxyl esterase, a/b hydrolase | 671.5 | 391 | ||||||
CA_P0098 | amyA alpha-amylase | 81 | 36.5 | ||||||
CA_P0099 | muts DNA mismatch repair protein, MUTS fragment | 11 | 11 | ||||||
CA_P0100 | HTH transcriptional regulator TetR/AcrR family | 85 | 189.5 | ||||||
CA_P0101 | hypothetical protein | 58.5 | 158.5 | ||||||
CA_P0102 | Membrane protein | 197.5 | 1702 | ||||||
CA_P0103 | arsr Transcriptional regulator HTH-type, ArsR family | 68.5 | 77.5 | ||||||
CA_P0104 | arsb Heavy metal resistance membrane protein | 72.5 | 117.5 | ||||||
CA_P0105 | arsc Arsenate reductase, arsC, protein-tyrosine-phosphatase family enzyme | 81 | 195 | ||||||
CA_P0106 | dxs 1-deoxyxylulose-5-phosphate synthase, dehydrogenase | 27 | 15 | ||||||
CA_P0107 | HTH transcriptional regulator MerR family | 50 | 36.5 | ||||||
CA_P0108 | Predicted HTH containing transcriptional regulator | 111 | 105.5 | ||||||
CA_P0110 | NH2-acetyltransferase | 52.5 | 66.5 | ||||||
CA_P0111 | NH2-acetyltransferase | 15 | 23.5 | ||||||
CA_P0112 | hypothetical protein | 838.5 | 4584.5 | ||||||
CA_P0113 | Solo B3/4 domain (OB-fold DNA/RNA-binding) of Phe-aaRS-beta | 990.5 | 461.5 | ||||||
CA_P0114 | Possible beta-xylosidase, family 43 of glycosyl hydrolases | 36 | 37.5 | ||||||
CA_P0116 | Xylanase, glycosyl hydrolase family 10 | 59 | 217 | ||||||
CA_P0117 | Possible beta-xylosidase diverged, family 5/39 of glycosyl hydrolases and alpha-amylase C (Greek key) C-terminal domain | 55 | 251.5 | ||||||
CA_P0118 | Possible xylan degradation enzyme (glycosyl hydrolase family 30-like domain and Ricin B-like domain) | 38 | 244 | ||||||
CA_P0119 | Possible xylan degradation enzyme (glycosyl hydrolase family 30-like domain and Ricin B-like domain) | 24.5 | 189.5 | ||||||
CA_P0120 | Possible xylan degradation enzyme (glycosyl hydrolase family 43-like domain, cellulose-binding domain and Ricin B-like domain) | 28 | 211.5 | ||||||
CA_P0121 | Leu-rich protein family protein, YaeG (E.coli) homolog | 1 | 7 | ||||||
CA_P0123 | hypothetical protein | 127.5 | 96 | ||||||
CA_P0124 | Permease, MDR related, probably tetracycline resistance protein | 507 | 909.5 | ||||||
CA_P0125 | hypothetical protein | 223 | 119 | ||||||
CA_P0126 | Uncharacterized protein (NN.term domain homologous to B.subtilis (gi|833839) | 271 | 159 | ||||||
CA_P0127 | HTH transcriptional regulator TetR family | 62 | 29 |
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4. array (low scan) | pH 4.5 / Cy5 | ||||||||
ORF | Name | (F 635 median - B635) - B635 SD | (F 532 median - B532) - B532 SD | pH 5.7 / Cy3 | |||||
CA_P0002 | Transglutaminase-like predicted protease domain fused ChW-repeats and cell-adhesion domain | 16.5 | 45 | ||||||
CA_P0003 | Transglutaminase-like predicted protease domain fused to ChW-repeats and cell-adhesion domain | 8.5 | 28.5 | ||||||
CA_P0004 | Cysteine protease | 3907 | 131.5 | ||||||
CA_P0005 | Uncharacterized protein similar to Bacteriocin immunity protein of mesC/lccI/entI family | 102 | 33 | ||||||
CA_P0006 | GntR family HTH transcriptional regulator | 269.5 | 312 | ||||||
CA_P0007 | hypothetical protein | 159.5 | 180 | ||||||
CA_P0009 | Response regulator (CheY + HTH domains) | 596 | 133.5 | ||||||
CA_P0010 | bgla Beta_glucosidase | 508.5 | 160 | ||||||
CA_P0012 | pedb Pediocin immunity protein, PedB | 2200 | 842 | ||||||
CA_P0013 | FAD dependent dehydrogenase | 190.5 | 138 | ||||||
CA_P0014 | Protein tyrosine phosphatase II superfamily protein | 389.5 | 371.5 | ||||||
CA_P0015 | GLPQ related phosphodiesterase | 1249.5 | 475.5 | ||||||
CA_P0017 | grkb1 Spore germination protein, GRKB | 10 | 3 | ||||||
CA_P0019 | grkc Spore germination protein, GRKC | 43.5 | 12 | ||||||
CA_P0020 | grka Spore germination protein, GRKA | 88 | 31.5 | ||||||
CA_P0021 | hypothetical protein | 13 | 7 | ||||||
CA_P0023 | hypothetical protein | 3 | 12 | ||||||
CA_P0025 | pdc Pyruvate decarboxylase | 788.5 | 1078.5 | ||||||
CA_P0026 | hypothetical protein | 602 | 485 | ||||||
CA_P0027 | Predicted amino acid permeases | 61 | 28.5 | ||||||
CA_P0028 | HTH transcriptional regulator TetR family | 83 | 92 | ||||||
CA_P0031 | hlyU Transcriptional activator HLYU, HTH of ArsR family | 80.5 | 69 | ||||||
CA_P0032 | Rhodanese-like domain | 21 | 17 | ||||||
CA_P0033 | hypothetical protein | 87.5 | 59 | ||||||
CA_P0034 | Rhodanese-like domain | 636 | 396.5 | ||||||
CA_P0035 | adhe Aldehyde-alcohol dehydrogenase, ADHE1 | 87 | 243 | ||||||
CA_P0036 | Uncharacterized, ortholog of YgaT gene of B.subtillis | 258 | 54827.5 | ||||||
CA_P0037 | Uncharacterized, ortholog of YgaS gene of B.subtillis | 76 | 28223 | ||||||
CA_P0038 | Uncharacterized conserved protein, YCII family | 30.5 | 108.5 | ||||||
CA_P0040 | Xre family DNA-binding domain and TPR repeats containing protein | 233 | 48 | ||||||
CA_P0044 | hypothetical protein | 290 | 37.5 | ||||||
CA_P0045 | Glycosyl transferase | 329 | 25 | ||||||
CA_P0046 | TetR family HTH transcriptional regulator | 12 | 7 | ||||||
CA_P0047 | Sulphohydrolase/Glycosulfatase, Zn-dependent hydrolase | 29 | 18 | ||||||
CA_P0048 | Related to methyl-accepting chemotaxis protein | 124.5 | 173.5 | ||||||
CA_P0049 | Permease, MDR related | 120.5 | 25.5 | ||||||
CA_P0050 | pnba Para-nitrobenzyl esterase, a/b hydrolase | 338 | 427.5 | ||||||
CA_P0051 | Oxidoreductase | 38.5 | 21.5 | ||||||
CA_P0052 | MarR family HTH transcriptional regulator | 58 | 24 | ||||||
CA_P0053 | xynb Xylanase, glycosyl hydrolase family 10 | 1977.5 | 82.5 | ||||||
CA_P0054 | Xylanase/chitin deacetylase family enzyme | 3082.5 | 98 | ||||||
CA_P0055 | hypothetical protein | 221.5 | 75.5 | ||||||
CA_P0056 | pell Pectate lyase, secreted, polysaccharide lyase family | 1006 | 88.5 | ||||||
CA_P0057 | Putative glycoportein or S-layer protein | 455 | 399.5 | ||||||
CA_P0058 | Rare lipoprotein A RLPA releated protein | 1842 | 2759.5 | ||||||
CA_P0059 | Alcohol dehydrogenase | 146 | 155.5 | ||||||
CA_P0061 | hypothetical protein | 1 | 10 | ||||||
CA_P0062 | Hypothetical protein, CF-18 family | 12.5 | 22 | ||||||
CA_P0064 | alf Fructose-bisphosphate aldolase class I | 6.5 | 7 | ||||||
CA_P0065 | Predicted secreted metalloprotease | 1836 | 93 | ||||||
CA_P0066 | ptna Mannose-specific phosphotransferase system component IIAB | 2 | 21 | ||||||
CA_P0067 | manY/levF Mannose/fructose-specific phosphotransferase system component IIC | 3 | 30 | ||||||
CA_P0072 | hypothetical protein | 584 | 1204 | ||||||
CA_P0073 | ABC ATPase containing transporter | 153.5 | 339.5 | ||||||
CA_P0074 | hypothetical protein | 154.5 | 348.5 | ||||||
CA_P0076 | penicillin binding protein 1A | 119.5 | 179.5 | ||||||
CA_P0077 | Uncharacterized Fe-S protein | 3.5 | 8.5 | ||||||
CA_P0078 | thil Acetyl coenzyme A acetyltransferase (thiolase) | 31 | 76.5 | ||||||
CA_P0079 | thlr ThlR, HTH transcriptional regulator TetR/AcrR family | 122.5 | 172.5 | ||||||
CA_P0080 | Site-Specific Recombinase, Xerd | 51 | 42 | ||||||
CA_P0081 | TnpR resolvase C-terminal fragment | 22 | 24 | ||||||
CA_P0082 | crp CRP (cyclic AMP receptor protein) regulatory protein | 249 | 92 | ||||||
CA_P0083 | SAM-dependent methyltransferase | 117.5 | 286 | ||||||
CA_P0084 | hypothetical protein | 210 | 219.5 | ||||||
CA_P0085 | Hypothetical secreted protein (fragment) | 120.5 | 101.5 | ||||||
CA_P0086 | Permease, MDR related, probably tetracycline resistance protein | 223 | 257 | ||||||
CA_P0087 | HTH transcriptional regulator TetR/AcrR family | 1078.5 | 746.5 | ||||||
CA_P0088 | abf 3-oxoacyl-acyl-carrier protein synthase | 1604 | 935.5 | ||||||
CA_P0089 | Predicted membrane protein | 110 | 40 | ||||||
CA_P0090 | ABC-type transporter, ATPase component | 133 | 72 | ||||||
CA_P0091 | Predicted regulator of stationary/sporulation gene expression | 554 | 199 | ||||||
CA_P0093 | tnpa TnpA, transposase (3' segment) | 54 | 75 | ||||||
CA_P0094 | TnpA, transposase (5' segment) | 27 | 56 | ||||||
CA_P0096 | ipyr Inorganic pyrophosphatase | 155 | 138.5 | ||||||
CA_P0097 | lipg Carboxyl esterase, a/b hydrolase | 462.5 | 400 | ||||||
CA_P0098 | amyA alpha-amylase | 47 | 48.5 | ||||||
CA_P0099 | muts DNA mismatch repair protein, MUTS fragment | 24.5 | 4 | ||||||
CA_P0100 | HTH transcriptional regulator TetR/AcrR family | 163.5 | 75 | ||||||
CA_P0101 | hypothetical protein | 205 | 73.5 | ||||||
CA_P0102 | Membrane protein | 1998 | 154 | ||||||
CA_P0103 | arsr Transcriptional regulator HTH-type, ArsR family | 141 | 36 | ||||||
CA_P0104 | arsb Heavy metal resistance membrane protein | 141 | 44 | ||||||
CA_P0105 | arsc Arsenate reductase, arsC, protein-tyrosine-phosphatase family enzyme | 141 | 54 | ||||||
CA_P0106 | dxs 1-deoxyxylulose-5-phosphate synthase, dehydrogenase | 18.5 | 28 | ||||||
CA_P0107 | HTH transcriptional regulator MerR family | 51.5 | 38 | ||||||
CA_P0108 | Predicted HTH containing transcriptional regulator | 114.5 | 76 | ||||||
CA_P0110 | NH2-acetyltransferase | 56 | 42 | ||||||
CA_P0112 | hypothetical protein | 4686.5 | 784.5 | ||||||
CA_P0113 | Solo B3/4 domain (OB-fold DNA/RNA-binding) of Phe-aaRS-beta | 658 | 591.5 | ||||||
CA_P0114 | Possible beta-xylosidase, family 43 of glycosyl hydrolases | 19 | 16 | ||||||
CA_P0115 | xynD Endo-1,4-beta-xylanase XynD B.subtilis ortholog (family 43 glycosyl hydrolase and cellulose-binding domain) | 9 | 4 | ||||||
CA_P0116 | Xylanase, glycosyl hydrolase family 10 | 224.5 | 53 | ||||||
CA_P0117 | Possible beta-xylosidase diverged, family 5/39 of glycosyl hydrolases and alpha-amylase C (Greek key) C-terminal domain | 339.5 | 45 | ||||||
CA_P0118 | Possible xylan degradation enzyme (glycosyl hydrolase family 30-like domain and Ricin B-like domain) | 262.5 | 27.5 | ||||||
CA_P0119 | Possible xylan degradation enzyme (glycosyl hydrolase family 30-like domain and Ricin B-like domain) | 224 | 17 | ||||||
CA_P0120 | Possible xylan degradation enzyme (glycosyl hydrolase family 43-like domain, cellulose-binding domain and Ricin B-like domain) | 199.5 | 15 | ||||||
CA_P0123 | hypothetical protein | 102 | 79.5 | ||||||
CA_P0124 | Permease, MDR related, probably tetracycline resistance protein | 1062.5 | 421 |