Selected Cell
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Read me_data
Transcriptome_data
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1. Array
2. Array
3. Array
4. Array
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Description: | This data-sheet reflects the transcriptome of C. acetobutylicum concerning the comparison of acidogenesis to solventogenesis. Genes with average fold regulation > 1.0 (significant > 3.0) showed elevated transcript level in the acidogenesis (pH 5.7) or repressed transcript level in the solventogenesis (pH 4.5), respectively. Genes were figured out as significant induced, if the average fold regulation was > 3.0 and at least three out of four micro arrays were > 2.0.Furthermore, genes with fold regulation < 1.0 (significant < 0.33) showed elevated transcript level in the solventogenesis (pH 4.5) or repressed transcript level in the acidogenesis (pH 5.7), respectively. Genes were figured out as significant induced, if the average fold regulation was < 0.33 and at least three out of four micro arrays were < 0.5. | ||||||||
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ORF | Name | Array 1 | Array 2 | Array 3 | Array 4 | Average | Standard deviation | ||
CA_P0002 | Transglutaminase-like predicted protease domain fused ChW-repeats and cell-adhesion domain | 1.137 | 1.0828370330265296 | 2.4875 | 1.662510390689942 | 1.592461855929118 | 0.6514504429575791 | ||
CA_P0003 | Transglutaminase-like predicted protease domain fused to ChW-repeats and cell-adhesion domain | 1.5430000000000001 | 1.4598540145985401 | 1.5985 | 1.547987616099071 | 1.5373354076744028 | 0.05741669553324797 | ||
CA_P0004 | Cysteine protease | 0.022 | 0.0196645232336342 | 0.0415 | 0.036404011722091775 | 0.029892133738931494 | 0.010708826664698436 | ||
CA_P0005 | Uncharacterized protein similar to Bacteriocin immunity protein of mesC/lccI/entI family | 1.7045 | 1.4357501794687724 | 0.6385000000000001 | 0.39401103230890466 | 1.0431903029444192 | 0.6262698403501651 | ||
CA_P0006 | GntR family HTH transcriptional regulator | 0.9925 | 0.9925558312655086 | 0.9864999999999999 | 1.1389521640091116 | 1.027626998818655 | 0.0742711592209243 | ||
CA_P0007 | hypothetical protein | 1.155 | 1.106194690265487 | 1.58 | 1.0834236186348862 | 1.2311545772250934 | 0.23447249881260057 | ||
CA_P0009 | Response regulator (CheY + HTH domains) | 0.2465 | 0.2800336040324839 | 0.5075 | 0.23975065931431316 | 0.3184460658366993 | 0.1272610317963096 | ||
CA_P0010 | bgla Beta_glucosidase | 0.2975 | 0.32010243277848915 | 0.34650000000000003 | 0.3337226764558652 | 0.3244562773085886 | 0.020955418645163666 | ||
CA_P0012 | pedb Pediocin immunity protein, PedB | 0.763 | 0.6472491909385114 | 0.8755 | 0.3861749372465727 | 0.667981032046271 | 0.20971187427320875 | ||
CA_P0013 | FAD dependent dehydrogenase | 1.5255 | 1.17096018735363 | 1.764 | 0.7215007215007215 | 1.2954902272135878 | 0.4536436142574396 | ||
CA_P0014 | Protein tyrosine phosphatase II superfamily protein | 1.2175 | 1.0065425264217414 | 1.9925 | 0.9438414346389807 | 1.2900959902651805 | 0.4826787595781291 | ||
CA_P0015 | GLPQ related phosphodiesterase | 0.971 | 0.9103322712790168 | 0.7044999999999999 | 0.3896356906292616 | 0.7438669904770696 | 0.26225284711419483 | ||
CA_P0018 | hypothetical protein | 0.739 | 0.8779631255487269 | 0.508 | 0.7083210418495757 | 0.1868798475527586 | |||
CA_P0019 | grkc Spore germination protein, GRKC | 0.7225 | 0.9025270758122743 | 0.5569999999999999 | 0.5060728744939271 | 0.6720249875765504 | 0.1793040166530483 | ||
CA_P0020 | grka Spore germination protein, GRKA | 0.6765 | 0.7037297677691766 | 0.531 | 0.48250904704463216 | 0.5984347037034522 | 0.10827039936785426 | ||
CA_P0025 | pdc Pyruvate decarboxylase | 1.137 | 1.1173184357541899 | 2.144 | 1.358695652173913 | 1.4392535219820257 | 0.48240942499147804 | ||
CA_P0026 | hypothetical protein | 1.0845 | 1.1554015020219528 | 1.6505 | 1.3245033112582782 | 1.3037262033200578 | 0.25215345824543517 | ||
CA_P0027 | Predicted amino acid permeases | 0.877 | 0.7840062720501764 | 0.353 | 0.556947925368978 | 0.6427385493547886 | 0.2353320029802095 | ||
CA_P0028 | HTH transcriptional regulator TetR family | 1.2015 | 0.921234454168586 | 1.819 | 1.1061946902654867 | 1.2619822861085181 | 0.3891468019964196 | ||
CA_P0031 | hlyU Transcriptional activator HLYU, HTH of ArsR family | 1.1125 | 0.9960159362549801 | 1.0485 | 0.8616975441619993 | 1.0046783701042448 | 0.1065588936807836 | ||
CA_P0032 | Rhodanese-like domain | 0.9239999999999999 | 0.8417508417508418 | 1.278 | 0.8361204013377926 | 0.9699678107721585 | 0.20924593933533983 | ||
CA_P0033 | hypothetical protein | 0.8845000000000001 | 0.8186655751125665 | 1.119 | 0.721240533717995 | 0.8858515272076404 | 0.16928355731116965 | ||
CA_P0034 | Rhodanese-like domain | 0.835 | 0.7140307033202428 | 0.8405 | 0.6273525721455459 | 0.7542208188664471 | 0.10276213734532307 | ||
CA_P0035 | adhe Aldehyde-alcohol dehydrogenase, ADHE1 | 2.8995 | 3.3783783783783785 | 2.9415 | 2.306805074971165 | 2.8815458633373856 | 0.44010846062459397 | ||
CA_P0036 | Uncharacterized, ortholog of YgaT gene of B,subtillis | 90.372 | 19.047619047619047 | 269.9845 | 200 | 144.85102976190478 | 111.7948375720697 | ||
CA_P0037 | Uncharacterized, ortholog of YgaS gene of B,subtillis | 114.935 | 54.054054054054056 | 451.8835 | 250 | 217.7181385135135 | 176.28182096269487 | ||
CA_P0038 | Uncharacterized conserved protein, YCII family | 4.164 | 3.361344537815126 | 3.1865 | 2.5380710659898478 | 3.312478900951244 | 0.6690924726637282 | ||
CA_P0040 | Xre family DNA-binding domain and TPR repeats containing protein | 0.2145 | 0.1866019779809666 | 0.25549310168625444 | 0.21886502655574036 | 0.034652371116109144 | |||
CA_P0044 | hypothetical protein | 0.1835 | 0.16975046681378375 | 0.2865 | 0.18589088205223533 | 0.20641033721650476 | 0.05386474349185711 | ||
CA_P0045 | Glycosyl transferase | 0.1895 | 0.1760098565519669 | 0.226 | 0.14084507042253522 | 0.18308873174362553 | 0.03519999384382431 | ||
CA_P0046 | TetR family HTH transcriptional regulator | 0.467 | 0.4428697962798937 | 0.364 | 0.6353240152477764 | 0.4772984528819175 | 0.11416363740068204 | ||
CA_P0047 | Sulphohydrolase/Glycosulfatase, Zn-dependent hydrolase | 0.87 | 0.9170105456212746 | 0.7625 | 0.6966213862765587 | 0.8115329829744583 | 0.10025437110472638 | ||
CA_P0048 | Related to methyl-accepting chemotaxis protein | 1.509 | 1.6949152542372883 | 1.675 | 1.3793103448275863 | 1.5645563997662186 | 0.14898974707108825 | ||
CA_P0049 | Permease, MDR related | 0.816 | 0.9128251939753538 | 0.4305 | 0.3269042170644001 | 0.6215573527599384 | 0.2863379593015107 | ||
CA_P0050 | pnba Para-nitrobenzyl esterase, a/b hydrolase | 0.98 | 1.1217049915872126 | 1.3225 | 1.2399256044637321 | 1.1660326490127362 | 0.14890185638174003 | ||
CA_P0052 | MarR family HTH transcriptional regulator | 1.439 | 1.4275517487508922 | 0.4505 | 0.49443757725587145 | 0.9528723315016909 | 0.5550318437106448 | ||
CA_P0053 | xynb Xylanase, glycosyl hydrolase family 10 | 0.059 | 0.06588917440864465 | 0.051000000000000004 | 0.04826021910139472 | 0.056037348377509844 | 0.00799363078202049 | ||
CA_P0054 | Xylanase/chitin deacetylase family enzyme | 0.0595 | 0.05707436790137549 | 0.061 | 0.036093264996751605 | 0.053416908224531774 | 0.011661802496399558 | ||
CA_P0055 | hypothetical protein | 1.02 | 0.9259259259259258 | 0.503 | 0.37814331631688414 | 0.7067673105607024 | 0.31393208547289375 | ||
CA_P0056 | pell Pectate lyase, secreted, polysaccharide lyase family | 0.101 | 0.09124920156948627 | 0.159 | 0.11145165784341042 | 0.11567521485322417 | 0.03003812853555221 | ||
CA_P0057 | Putative glycoportein or S-layer protein | 0.6134999999999999 | 0.5497526113249038 | 1.396 | 0.8726003490401397 | 0.8579632400912608 | 0.3849042597027415 | ||
CA_P0058 | Rare lipoprotein A RLPA releated protein | 1.2525 | 1.187648456057007 | 1.455 | 1.4936519790888723 | 1.3472001087864698 | 0.1499931191239491 | ||
CA_P0059 | Alcohol dehydrogenase | 1.0234999999999999 | 0.8583690987124464 | 0.9135 | 1.0060362173038229 | 0.9503513290040673 | 0.07803906285148514 | ||
CA_P0062 | Hypothetical protein, CF-18 family | 1.08 | 0.9657170449058428 | 1.2865000000000002 | 1.4492753623188408 | 1.195373101806171 | 0.2151149510992163 | ||
CA_P0064 | alf Fructose-bisphosphate aldolase class I | 0.755 | 0.54421768707483 | 0.7993605115907275 | 0.6995260662218525 | 0.13631758221925774 | |||
CA_P0065 | Predicted secreted metalloprotease | 0.0665 | 0.06532745386248572 | 0.067 | 0.05780848050408996 | 0.06415898359164393 | 0.004291306883130686 | ||
CA_P0066 | ptna Mannose-specific phosphotransferase system component IIAB | 1.6455 | 1.773049645390071 | 1.8195000000000001 | 1.6920473773265652 | 1.732524255679159 | 0.07835535733454028 | ||
CA_P0067 | manY/levF Mannose/fructose-specific phosphotransferase system component IIC | 1.48 | 1.7889087656529519 | 1.4769999999999999 | 2.066115702479339 | 1.7030061170330728 | 0.2828652973020924 | ||
CA_P0072 | hypothetical protein | 1.9565000000000001 | 2.109704641350211 | 6.0375 | 2.0242914979757085 | 3.03199903483148 | 2.004647571156857 | ||
CA_P0073 | ABC ATPase containing transporter | 2.657 | 2.398081534772182 | 7.5625 | 2.1052631578947367 | 3.6807111731667295 | 2.597655628979498 | ||
CA_P0074 | hypothetical protein | 2.937 | 2.2050716648291067 | 8.293500000000002 | 2.0120724346076457 | 3.8619110248591886 | 2.9811329347204207 | ||
CA_P0076 | penicillin binding protein 1A | 1.4595 | 1.3783597518952446 | 2.3195 | 1.402524544179523 | 1.639971074018692 | 0.454294584382796 | ||
CA_P0079 | thlr ThlR, HTH transcriptional regulator TetR/AcrR family | 1.09 | 0.9900990099009901 | 2.6255 | 1.3280212483399734 | 1.5084050645602407 | 0.7580992415872404 | ||
CA_P0080 | Site-Specific Recombinase, Xerd | 0.8565 | 0.9237875288683602 | 0.9375 | 0.8554319931565441 | 0.893304880506226 | 0.043479325598566904 | ||
CA_P0081 | TnpR resolvase C-terminal fragment | 1.097 | 0.9803921568627451 | 0.8818342151675486 | 0.9864087906767646 | 0.10770899986760639 | |||
CA_P0082 | crp CRP (cyclic AMP receptor protein) regulatory protein | 0.9535 | 0.856898029134533 | 0.6065 | 0.39992001599680066 | 0.7042045112828333 | 0.25006584245297725 | ||
CA_P0083 | SAM-dependent methyltransferase | 2.0105 | 1.8034265103697025 | 3.0140000000000002 | 2.157497303128371 | 2.2463559533745183 | 0.5319736097044261 | ||
CA_P0084 | hypothetical protein | 1.229 | 1.2172854534388313 | 1.3385 | 0.9794319294809012 | 1.1910543457299332 | 0.15127481803197904 | ||
CA_P0085 | Hypothetical secreted protein (fragment) | 1.1804999999999999 | 1.0834236186348862 | 1.1355 | 0.8572653236176596 | 1.0641722355631364 | 0.14352802829578543 | ||
CA_P0086 | Permease, MDR related, probably tetracycline resistance protein | 0.9225 | 0.9930486593843098 | 1.332 | 1.124859392575928 | 1.0931020129900595 | 0.1799967590074701 | ||
CA_P0087 | HTH transcriptional regulator TetR/AcrR family | 1.54 | 1.2944983818770228 | 0.897 | 0.6918021445866482 | 1.1058251316159178 | 0.3825913316161554 | ||
CA_P0088 | abf 3-oxoacyl-acyl-carrier protein synthase | 0.9844999999999999 | 1.0775862068965518 | 0.667 | 0.5885815185403179 | 0.8294169313592175 | 0.23806140885603527 | ||
CA_P0089 | Predicted membrane protein | 1.0375 | 1.0389610389610389 | 0.4125 | 0.42589437819420783 | 0.7287138542888117 | 0.35744138732879893 | ||
CA_P0090 | ABC-type transporter, ATPase component | 1.1405 | 1.1820330969267139 | 0.46399999999999997 | 0.5374899220639613 | 0.8310057547476688 | 0.38290627698150487 | ||
CA_P0091 | Predicted regulator of stationary/sporulation gene expression | 0.7835000000000001 | 0.6281407035175879 | 0.8320000000000001 | 0.3787161522438932 | 0.6555892139403704 | 0.20403761715770213 | ||
CA_P0093 | tnpa TnpA, transposase (3' segment) | 0.8705 | 1.1092623405435387 | 1.1055000000000001 | 1.1494252873563218 | 1.0586719069749653 | 0.12701326031856566 | ||
CA_P0094 | TnpA, transposase (5' segment) | 1.0154999999999998 | 0.924214417744917 | 1.7719999999999998 | 1.4064697609001406 | 1.2795460446612643 | 0.38927342860810543 | ||
CA_P0096 | ipyr Inorganic pyrophosphatase | 0.782 | 0.8240626287597858 | 1.361 | 0.8695652173913044 | 0.9591569615377726 | 0.2702712069692132 | ||
CA_P0097 | lipg Carboxyl esterase, a/b hydrolase | 0.8345 | 0.7821666014861164 | 1.664 | 0.8517887563884157 | 1.033113839468633 | 0.4216310024905598 | ||
CA_P0098 | amyA alpha-amylase | 0.885 | 1.0822510822510822 | 1.385 | 1 | 1.0880627705627706 | 0.21384966237578326 | ||
CA_P0099 | muts DNA mismatch repair protein, MUTS fragment | 0.9844999999999999 | 0.84530853761623 | 0.467 | 0.4065040650406504 | 0.6758281506642201 | 0.2829290675184528 | ||
CA_P0100 | HTH transcriptional regulator TetR/AcrR family | 0.7195 | 0.6583278472679394 | 0.4235 | 0.4921259842519685 | 0.5733634578799769 | 0.13860425623103106 | ||
CA_P0101 | hypothetical protein | 0.6639999999999999 | 0.6209251785159888 | 0.411 | 0.4094165813715456 | 0.5263354399718836 | 0.13524179942543763 | ||
CA_P0102 | Membrane protein | 0.1095 | 0.09655771737556124 | 0.1225 | 0.08394191219675984 | 0.10312490739308026 | 0.01660473134081345 | ||
CA_P0103 | arsr Transcriptional regulator HTH-type, ArsR family | 0.733 | 0.5107252298263534 | 0.711 | 0.3293265272517701 | 0.5710129392695309 | 0.18963395852710238 | ||
CA_P0104 | arsb Heavy metal resistance membrane protein | 0.601 | 0.6489292667099287 | 0.6025 | 0.36737692872887584 | 0.5549515488597011 | 0.12701360114547103 | ||
CA_P0105 | arsc Arsenate reductase, arsC, protein-tyrosine-phosphatase family enzyme | 0.4445 | 0.5457025920873124 | 0.398 | 0.44964028776978415 | 0.4594607199642742 | 0.06200899030557114 | ||
CA_P0108 | Predicted HTH containing transcriptional regulator | 1.0405 | 0.8126777732629011 | 0.9059999999999999 | 0.7320644216691068 | 0.872810548733002 | 0.1324722797554954 | ||
CA_P0110 | NH2-acetyltransferase | 1.29 | 1.4074595355383532 | 0.654 | 0.8028904054596547 | 1.038587485249502 | 0.3663948185994026 | ||
CA_P0111 | NH2-acetyltransferase | 1.363 | 1.8281535648994514 | 0.469 | 1.220051188299817 | 0.6907607221893789 | |||
CA_P0112 | hypothetical protein | 0.267 | 0.24663953631767171 | 0.184 | 0.1697648756472286 | 0.2168511029912251 | 0.04725311419885985 | ||
CA_P0113 | Solo B3/4 domain (OB-fold DNA/RNA-binding) of Phe-aaRS-beta | 1.0339999999999998 | 0.7246376811594204 | 2.043 | 0.891662951404369 | 1.1733251581409474 | 0.5934082015378999 | ||
CA_P0114 | Possible beta-xylosidase, family 43 of glycosyl hydrolases | 0.355 | 0.36094567767550984 | 0.6619999999999999 | 0.7215007215007215 | 0.5248615997940578 | 0.19424664527792485 | ||
CA_P0116 | Xylanase, glycosyl hydrolase family 10 | 0.165 | 0.1679684219366759 | 0.279 | 0.2787456445993031 | 0.22267851663399474 | 0.06489899349428342 | ||
CA_P0117 | Possible beta-xylosidase diverged, family 5/39 of glycosyl hydrolases and alpha-amylase C (Greek key) C-terminal domain | 0.1245 | 0.12394645513138325 | 0.2225 | 0.19303156066016794 | 0.16599450394788778 | 0.049711520418359016 | ||
CA_P0118 | Possible xylan degradation enzyme (glycosyl hydrolase family 30-like domain and Ricin B-like domain) | 0.1395 | 0.16242995208316416 | 0.1785 | 0.1580403002765705 | 0.1596175630899337 | 0.016038080290065253 | ||
CA_P0119 | Possible xylan degradation enzyme (glycosyl hydrolase family 30-like domain and Ricin B-like domain) | 0.0925 | 0.0898069151324652 | 0.1515 | 0.12122681537156019 | 0.11375843262600635 | 0.028900973435956795 | ||
CA_P0120 | Possible xylan degradation enzyme (glycosyl hydrolase family 43-like domain, cellulose-binding domain and Ricin B-like domain) | 0.094 | 0.10471752447772134 | 0.1555 | 0.12634238787113078 | 0.12013997808721304 | 0.027141306567280508 | ||
CA_P0121 | Leu-rich protein family protein, YaeG (E,coli) homolog | 0.34 | 0.4024144869215292 | 0.287 | 0.34313816230717636 | 0.057771203854858476 | |||
CA_P0123 | hypothetical protein | 0.7295 | 0.723589001447178 | 1.0745 | 0.7864726700747149 | 0.8285154178804732 | 0.16642276800081074 | ||
CA_P0124 | Permease, MDR related, probably tetracycline resistance protein | 0.9065000000000001 | 0.8012820512820513 | 0.5505 | 0.4025764895330113 | 0.6652146352037657 | 0.23012403327653436 | ||
CA_P0125 | hypothetical protein | 1.3725 | 1.2077294685990336 | 1.5325 | 1.5600624024960998 | 1.4181979677737833 | 0.16286575843687204 | ||
CA_P0126 | Uncharacterized protein (NN,term domain homologous to B,subtilis (gi|833839) | 1.2885 | 1.2070006035003018 | 1.4875 | 1.5936254980079683 | 1.3941565253770676 | 0.1776621472959332 | ||
CA_P0127 | HTH transcriptional regulator TetR family | 1.5485 | 1.2539184952978057 | 1.226 | 1.1820330969267139 | 1.3026128980561298 | 0.1665739438921093 | ||
CA_P0128 | Permease, MDR related | 0.295 | 0.2476166893648632 | 0.049 | 0.04119125097829221 | 0.15820198508578887 | 0.1320672450797133 | ||
CA_P0129 | Glycogen-binding regulatory subunit of S/T protein phosphatase I | 0.194 | 0.20986358866736624 | 0.2235 | 0.24786218862312556 | 0.21880644432262297 | 0.02281520026177667 | ||
CA_P0131 | Permease, MDR related | 1.238 | 1.2135922330097089 | 0.33799999999999997 | 0.5986231667165519 | 0.8470538499315653 | 0.4502010310278794 | ||
CA_P0132 | hypothetical protein | 1.097 | 1.6406890894175552 | 0.6105006105006106 | 1.1160632333060552 | 0.5153587397836222 | |||
CA_P0133 | Antibiotic-resistance protein, alpha/beta superfamily hydrolase | 0.7195 | 0.7132667617689015 | 1.0375 | 1.1655011655011656 | 0.9089419818175168 | 0.22841981451372254 |
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Description: | The single sheets contain the transcript amount of the genes for all four microarrays (sheet 1 to 4). The first biological experiment will be represented by the 1. and 2. array. The 3. and 4. array showed the transcript level of the second biological experiment. The 1. and 3. array the cDNA of pH 4.5 was labeled by Cy3 and pH 5.7 by Cy5, respectively. The 2. and 4. array contained the transcript level of the dyeflip (pH 4.5 Cy5 / pH 5.7 Cy3). Furthermore, the 1. and 2. array were evaluated under high scanning conditions and the 3. and 4. array under low scanning conditions. | ||||||||
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1. Array (high Scan) | pH 4.5 / Cy3 | ||||||||
ORF | Name | (F 635 median - B635) - B635 SD | (F 532 median - B532) - B532 SD | pH 5.7 / Cy5 | |||||
CA_P0002 | Transglutaminase-like predicted protease domain fused ChW-repeats and cell-adhesion domain | 373.5 | 279 | ||||||
CA_P0003 | Transglutaminase-like predicted protease domain fused to ChW-repeats and cell-adhesion domain | 266 | 109 | ||||||
CA_P0004 | Cysteine protease | 415.5 | 20426.5 | ||||||
CA_P0005 | Uncharacterized protein similar to Bacteriocin immunity protein of mesC/lccI/entI family | 340.5 | 101.5 | ||||||
CA_P0006 | GntR family HTH transcriptional regulator | 1748.5 | 1721 | ||||||
CA_P0007 | hypothetical protein | 1246 | 1028 | ||||||
CA_P0009 | Response regulator (CheY + HTH domains) | 445 | 1880 | ||||||
CA_P0010 | bgla Beta_glucosidase | 660 | 2242.5 | ||||||
CA_P0012 | pedb Pediocin immunity protein, PedB | 3038 | 3942 | ||||||
CA_P0013 | FAD dependent dehydrogenase | 1007.5 | 603 | ||||||
CA_P0014 | Protein tyrosine phosphatase II superfamily protein | 1855 | 1464.5 | ||||||
CA_P0015 | GLPQ related phosphodiesterase | 3905.5 | 3969 | ||||||
CA_P0018 | hypothetical protein | 63 | 32 | ||||||
CA_P0019 | grkc Spore germination protein, GRKC | 129 | 127.5 | ||||||
CA_P0020 | grka Spore germination protein, GRKA | 168 | 213.5 | ||||||
CA_P0024 | MarR family HTH transcriptional regulator | 95 | 81 | ||||||
CA_P0025 | pdc Pyruvate decarboxylase | 5988 | 5220.5 | ||||||
CA_P0026 | hypothetical protein | 5853.5 | 5351 | ||||||
CA_P0027 | Predicted amino acid permeases | 235.5 | 219.5 | ||||||
CA_P0028 | HTH transcriptional regulator TetR family | 657 | 496 | ||||||
CA_P0031 | hlyU Transcriptional activator HLYU, HTH of ArsR family | 458.5 | 346 | ||||||
CA_P0032 | Rhodanese-like domain | 257.5 | 247 | ||||||
CA_P0033 | hypothetical protein | 411.5 | 417.5 | ||||||
CA_P0034 | Rhodanese-like domain | 2115 | 2481 | ||||||
CA_P0035 | adhe Aldehyde-alcohol dehydrogenase, ADHE1 | 2648.5 | 850.5 | ||||||
CA_P0036 | Uncharacterized, ortholog of YgaT gene of B,subtillis | 46107.5 | 445 | ||||||
CA_P0037 | Uncharacterized, ortholog of YgaS gene of B,subtillis | 46444.5 | 354.5 | ||||||
CA_P0038 | Uncharacterized conserved protein, YCII family | 988.5 | 178.5 | ||||||
CA_P0040 | Xre family DNA-binding domain and TPR repeats containing protein | 403 | 1927.5 | ||||||
CA_P0044 | hypothetical protein | 208 | 1194.5 | ||||||
CA_P0045 | Glycosyl transferase | 356.5 | 1915 | ||||||
CA_P0046 | TetR family HTH transcriptional regulator | 78 | 135 | ||||||
CA_P0047 | Sulphohydrolase/Glycosulfatase, Zn-dependent hydrolase | 107 | 70 | ||||||
CA_P0048 | Related to methyl-accepting chemotaxis protein | 1133.5 | 688.5 | ||||||
CA_P0049 | Permease, MDR related | 166 | 147 | ||||||
CA_P0050 | pnba Para-nitrobenzyl esterase, a/b hydrolase | 1928.5 | 1907 | ||||||
CA_P0052 | MarR family HTH transcriptional regulator | 473.5 | 317 | ||||||
CA_P0053 | xynb Xylanase, glycosyl hydrolase family 10 | 311.5 | 5611 | ||||||
CA_P0054 | Xylanase/chitin deacetylase family enzyme | 439 | 7819.5 | ||||||
CA_P0055 | hypothetical protein | 294.5 | 241 | ||||||
CA_P0056 | pell Pectate lyase, secreted, polysaccharide lyase family | 434 | 4597 | ||||||
CA_P0057 | Putative glycoportein or S-layer protein | 684.5 | 1091.5 | ||||||
CA_P0058 | Rare lipoprotein A RLPA releated protein | 11422 | 9077.5 | ||||||
CA_P0059 | Alcohol dehydrogenase | 1053 | 982 | ||||||
CA_P0062 | Hypothetical protein, CF-18 family | 138.5 | 69 | ||||||
CA_P0064 | alf Fructose-bisphosphate aldolase class I | 85.5 | 76 | ||||||
CA_P0065 | Predicted secreted metalloprotease | 310 | 4875 | ||||||
CA_P0066 | ptna Mannose-specific phosphotransferase system component IIAB | 104.5 | 15 | ||||||
CA_P0067 | manY/levF Mannose/fructose-specific phosphotransferase system component IIC | 204 | 52 | ||||||
CA_P0072 | hypothetical protein | 5976.5 | 2992.5 | ||||||
CA_P0073 | ABC ATPase containing transporter | 2071.5 | 725 | ||||||
CA_P0074 | hypothetical protein | 1774 | 546 | ||||||
CA_P0076 | penicillin binding protein 1A | 928 | 564.5 | ||||||
CA_P0077 | Uncharacterized Fe-S protein | 142.5 | 71.5 | ||||||
CA_P0079 | thlr ThlR, HTH transcriptional regulator TetR/AcrR family | 2049.5 | 1822.5 | ||||||
CA_P0080 | Site-Specific Recombinase, Xerd | 292.5 | 297.5 | ||||||
CA_P0081 | TnpR resolvase C-terminal fragment | 224 | 161.5 | ||||||
CA_P0082 | crp CRP (cyclic AMP receptor protein) regulatory protein | 722.5 | 711.5 | ||||||
CA_P0083 | SAM-dependent methyltransferase | 1307.5 | 605 | ||||||
CA_P0084 | hypothetical protein | 1124 | 831 | ||||||
CA_P0085 | Hypothetical secreted protein (fragment) | 631.5 | 489 | ||||||
CA_P0086 | Permease, MDR related, probably tetracycline resistance protein | 635.5 | 606.5 | ||||||
CA_P0087 | HTH transcriptional regulator TetR/AcrR family | 3898.5 | 2437.5 | ||||||
CA_P0088 | abf 3-oxoacyl-acyl-carrier protein synthase | 1694 | 1179.5 | ||||||
CA_P0089 | Predicted membrane protein | 158 | 86 | ||||||
CA_P0090 | ABC-type transporter, ATPase component | 330 | 239 | ||||||
CA_P0091 | Predicted regulator of stationary/sporulation gene expression | 1641.5 | 1946 | ||||||
CA_P0093 | tnpa TnpA, transposase (3' segment) | 427.5 | 420.5 | ||||||
CA_P0094 | TnpA, transposase (5' segment) | 589.5 | 522.5 | ||||||
CA_P0096 | ipyr Inorganic pyrophosphatase | 820.5 | 1010.5 | ||||||
CA_P0097 | lipg Carboxyl esterase, a/b hydrolase | 2128 | 2506 | ||||||
CA_P0098 | amyA alpha-amylase | 295.5 | 261.5 | ||||||
CA_P0099 | muts DNA mismatch repair protein, MUTS fragment | 234 | 182.5 | ||||||
CA_P0100 | HTH transcriptional regulator TetR/AcrR family | 638 | 838 | ||||||
CA_P0101 | hypothetical protein | 742 | 1077.5 | ||||||
CA_P0102 | Membrane protein | 891.5 | 8260.5 | ||||||
CA_P0103 | arsr Transcriptional regulator HTH-type, ArsR family | 426 | 516 | ||||||
CA_P0104 | arsb Heavy metal resistance membrane protein | 212 | 334 | ||||||
CA_P0105 | arsc Arsenate reductase, arsC, protein-tyrosine-phosphatase family enzyme | 259 | 556 | ||||||
CA_P0107 | HTH transcriptional regulator MerR family | 301.5 | 233.5 | ||||||
CA_P0108 | Predicted HTH containing transcriptional regulator | 861 | 780 | ||||||
CA_P0110 | NH2-acetyltransferase | 372.5 | 235 | ||||||
CA_P0111 | NH2-acetyltransferase | 167 | 37 | ||||||
CA_P0112 | hypothetical protein | 3320.5 | 12481.5 | ||||||
CA_P0113 | Solo B3/4 domain (OB-fold DNA/RNA-binding) of Phe-aaRS-beta | 3682 | 3518.5 | ||||||
CA_P0114 | Possible beta-xylosidase, family 43 of glycosyl hydrolases | 97 | 252.5 | ||||||
CA_P0115 | xynD Endo-1,4-beta-xylanase XynD B,subtilis ortholog (family 43 glycosyl hydrolase and cellulose-binding domain) | 3 | 99 | ||||||
CA_P0116 | Xylanase, glycosyl hydrolase family 10 | 253.5 | 1616 | ||||||
CA_P0117 | Possible beta-xylosidase diverged, family 5/39 of glycosyl hydrolases and alpha-amylase C (Greek key) C-terminal domain | 181.5 | 1570.5 | ||||||
CA_P0118 | Possible xylan degradation enzyme (glycosyl hydrolase family 30-like domain and Ricin B-like domain) | 194 | 1459 | ||||||
CA_P0119 | Possible xylan degradation enzyme (glycosyl hydrolase family 30-like domain and Ricin B-like domain) | 78 | 1033.5 | ||||||
CA_P0120 | Possible xylan degradation enzyme (glycosyl hydrolase family 43-like domain, cellulose-binding domain and Ricin B-like domain) | 96 | 1150.5 | ||||||
CA_P0121 | Leu-rich protein family protein, YaeG (E,coli) homolog | 23 | 67 | ||||||
CA_P0123 | hypothetical protein | 597.5 | 758.5 | ||||||
CA_P0124 | Permease, MDR related, probably tetracycline resistance protein | 1910 | 2061.5 | ||||||
CA_P0125 | hypothetical protein | 1040 | 703.5 | ||||||
CA_P0126 | Uncharacterized protein (NN,term domain homologous to B,subtilis (gi|833839) | 2070 | 1554 | ||||||
CA_P0127 | HTH transcriptional regulator TetR family | 393 | 205 |
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2. array (high scan) | pH 4.5 / Cy5 | ||||||||||
ORF | Name | (F 635 median - B635) - B635 SD | (F 532 median - B532) - B532 SD | pH 5.7 / Cy3 | |||||||
CA_P0001 | Oxidoreductase | 89 | 117 | ||||||||
CA_P0002 | Transglutaminase-like predicted protease domain fused ChW-repeats and cell-adhesion domain | 279 | 286 | ||||||||
CA_P0003 | Transglutaminase-like predicted protease domain fused to ChW-repeats and cell-adhesion domain | 155.5 | 237.5 | ||||||||
CA_P0004 | Cysteine protease | 16476 | 271 | ||||||||
CA_P0005 | Uncharacterized protein similar to Bacteriocin immunity protein of mesC/lccI/entI family | 162.5 | 229.5 | ||||||||
CA_P0006 | GntR family HTH transcriptional regulator | 1599 | 1544 | ||||||||
CA_P0007 | hypothetical protein | 957.5 | 1054 | ||||||||
CA_P0009 | Response regulator (CheY + HTH domains) | 3064 | 814.5 | ||||||||
CA_P0010 | bgla Beta_glucosidase | 2148.5 | 642.5 | ||||||||
CA_P0012 | pedb Pediocin immunity protein, PedB | 3817.5 | 2461.5 | ||||||||
CA_P0013 | FAD dependent dehydrogenase | 664 | 744.5 | ||||||||
CA_P0014 | Protein tyrosine phosphatase II superfamily protein | 1588 | 1583.5 | ||||||||
CA_P0015 | GLPQ related phosphodiesterase | 3664 | 3275 | ||||||||
CA_P0019 | grkc Spore germination protein, GRKC | 116 | 94 | ||||||||
CA_P0020 | grka Spore germination protein, GRKA | 201 | 85 | ||||||||
CA_P0021 | hypothetical protein | 19 | 32 | ||||||||
CA_P0023 | hypothetical protein | 44 | 49 | ||||||||
CA_P0024 | MarR family HTH transcriptional regulator | 106.5 | 118 | ||||||||
CA_P0025 | pdc Pyruvate decarboxylase | 5205.5 | 5797 | ||||||||
CA_P0026 | hypothetical protein | 5122 | 5912 | ||||||||
CA_P0027 | Predicted amino acid permeases | 206.5 | 114.5 | ||||||||
CA_P0028 | HTH transcriptional regulator TetR family | 468 | 431.5 | ||||||||
CA_P0031 | hlyU Transcriptional activator HLYU, HTH of ArsR family | 406.5 | 375 | ||||||||
CA_P0032 | Rhodanese-like domain | 228.5 | 167.5 | ||||||||
CA_P0033 | hypothetical protein | 399.5 | 297 | ||||||||
CA_P0034 | Rhodanese-like domain | 2499 | 1767.5 | ||||||||
CA_P0035 | adhe Aldehyde-alcohol dehydrogenase, ADHE1 | 814.5 | 2786.5 | ||||||||
CA_P0036 | Uncharacterized, ortholog of YgaT gene of B,subtillis | 3232.5 | 60284.5 | ||||||||
CA_P0037 | Uncharacterized, ortholog of YgaS gene of B,subtillis | 1103.5 | 61929.5 | ||||||||
CA_P0038 | Uncharacterized conserved protein, YCII family | 171.5 | 622 | ||||||||
CA_P0040 | Xre family DNA-binding domain and TPR repeats containing protein | 1605.5 | 255 | ||||||||
CA_P0044 | hypothetical protein | 1393 | 187 | ||||||||
CA_P0045 | Glycosyl transferase | 1757 | 261.5 | ||||||||
CA_P0046 | TetR family HTH transcriptional regulator | 157 | 7 | ||||||||
CA_P0047 | Sulphohydrolase/Glycosulfatase, Zn-dependent hydrolase | 107 | 76.5 | ||||||||
CA_P0048 | Related to methyl-accepting chemotaxis protein | 601 | 1031.5 | ||||||||
CA_P0049 | Permease, MDR related | 211.5 | 152.5 | ||||||||
CA_P0050 | pnba Para-nitrobenzyl esterase, a/b hydrolase | 2205 | 2468 | ||||||||
CA_P0051 | Oxidoreductase | 98.5 | 62.5 | ||||||||
CA_P0052 | MarR family HTH transcriptional regulator | 259.5 | 354 | ||||||||
CA_P0053 | xynb Xylanase, glycosyl hydrolase family 10 | 4608.5 | 241.5 | ||||||||
CA_P0054 | Xylanase/chitin deacetylase family enzyme | 6967 | 350 | ||||||||
CA_P0055 | hypothetical protein | 249 | 196 | ||||||||
CA_P0056 | pell Pectate lyase, secreted, polysaccharide lyase family | 4865 | 396 | ||||||||
CA_P0057 | Putative glycoportein or S-layer protein | 1320.5 | 688 | ||||||||
CA_P0058 | Rare lipoprotein A RLPA releated protein | 8917 | 10583 | ||||||||
CA_P0059 | Alcohol dehydrogenase | 837 | 775.5 | ||||||||
CA_P0062 | Hypothetical protein, CF-18 family | 151 | 123.5 | ||||||||
CA_P0064 | alf Fructose-bisphosphate aldolase class I | 124 | 32.5 | ||||||||
CA_P0065 | Predicted secreted metalloprotease | 4264.5 | 229.5 | ||||||||
CA_P0066 | ptna Mannose-specific phosphotransferase system component IIAB | 38 | 51 | ||||||||
CA_P0067 | manY/levF Mannose/fructose-specific phosphotransferase system component IIC | 69.5 | 159.5 | ||||||||
CA_P0072 | hypothetical protein | 2581 | 5461.5 | ||||||||
CA_P0073 | ABC ATPase containing transporter | 701 | 1729.5 | ||||||||
CA_P0074 | hypothetical protein | 599.5 | 1349 | ||||||||
CA_P0076 | penicillin binding protein 1A | 530.5 | 935.5 | ||||||||
CA_P0078 | thil Acetyl coenzyme A acetyltransferase (thiolase) | 259.5 | 283.5 | ||||||||
CA_P0079 | thlr ThlR, HTH transcriptional regulator TetR/AcrR family | 1417.5 | 1399.5 | ||||||||
CA_P0080 | Site-Specific Recombinase, Xerd | 300 | 254 | ||||||||
CA_P0081 | TnpR resolvase C-terminal fragment | 136 | 109 | ||||||||
CA_P0082 | crp CRP (cyclic AMP receptor protein) regulatory protein | 740.5 | 617.5 | ||||||||
CA_P0083 | SAM-dependent methyltransferase | 708.5 | 1280.5 | ||||||||
CA_P0084 | hypothetical protein | 887.5 | 1064 | ||||||||
CA_P0085 | Hypothetical secreted protein (fragment) | 474.5 | 507 | ||||||||
CA_P0086 | Permease, MDR related, probably tetracycline resistance protein | 605.5 | 584 | ||||||||
CA_P0087 | HTH transcriptional regulator TetR/AcrR family | 2460 | 3028.5 | ||||||||
CA_P0088 | abf 3-oxoacyl-acyl-carrier protein synthase | 1536.5 | 1659.5 | ||||||||
CA_P0089 | Predicted membrane protein | 134 | 123 | ||||||||
CA_P0090 | ABC-type transporter, ATPase component | 167.5 | 214.5 | ||||||||
CA_P0091 | Predicted regulator of stationary/sporulation gene expression | 2159 | 1306 | ||||||||
CA_P0093 | tnpa TnpA, transposase (3' segment) | 385.5 | 425.5 | ||||||||
CA_P0094 | TnpA, transposase (5' segment) | 464.5 | 407.5 | ||||||||
CA_P0096 | ipyr Inorganic pyrophosphatase | 959 | 746 | ||||||||
CA_P0097 | lipg Carboxyl esterase, a/b hydrolase | 2062.5 | 1594 | ||||||||
CA_P0098 | amyA alpha-amylase | 297 | 309 | ||||||||
CA_P0099 | muts DNA mismatch repair protein, MUTS fragment | 211 | 148 | ||||||||
CA_P0100 | HTH transcriptional regulator TetR/AcrR family | 942 | 583 | ||||||||
CA_P0101 | hypothetical protein | 1041.5 | 599.5 | ||||||||
CA_P0102 | Membrane protein | 8135.5 | 733 | ||||||||
CA_P0103 | arsr Transcriptional regulator HTH-type, ArsR family | 587 | 263.5 | ||||||||
CA_P0104 | arsb Heavy metal resistance membrane protein | 468.5 | 269 | ||||||||
CA_P0105 | arsc Arsenate reductase, arsC, protein-tyrosine-phosphatase family enzyme | 463 | 214 | ||||||||
CA_P0106 | dxs 1-deoxyxylulose-5-phosphate synthase, dehydrogenase | 107 | 109 | ||||||||
CA_P0108 | Predicted HTH containing transcriptional regulator | 782.5 | 600 | ||||||||
CA_P0110 | NH2-acetyltransferase | 226 | 274 | ||||||||
CA_P0111 | NH2-acetyltransferase | 52 | 152 | ||||||||
CA_P0112 | hypothetical protein | 11961.5 | 2907 | ||||||||
CA_P0113 | Solo B3/4 domain (OB-fold DNA/RNA-binding) of Phe-aaRS-beta | 3998.5 | 2880.5 | ||||||||
CA_P0114 | Possible beta-xylosidase, family 43 of glycosyl hydrolases | 293.5 | 65 | ||||||||
CA_P0116 | Xylanase, glycosyl hydrolase family 10 | 2110.5 | 306 | ||||||||
CA_P0117 | Possible beta-xylosidase diverged, family 5/39 of glycosyl hydrolases and alpha-amylase C (Greek key) C-terminal domain | 1687 | 154 | ||||||||
CA_P0118 | Possible xylan degradation enzyme (glycosyl hydrolase family 30-like domain and Ricin B-like domain) | 1520 | 203 | ||||||||
CA_P0119 | Possible xylan degradation enzyme (glycosyl hydrolase family 30-like domain and Ricin B-like domain) | 797.5 | 16 | ||||||||
CA_P0120 | Possible xylan degradation enzyme (glycosyl hydrolase family 43-like domain, cellulose-binding domain and Ricin B-like domain) | 1005 | 35 | ||||||||
CA_P0122 | dTDP-4-keto-L-rhamnose reductase | 11 | 20 | ||||||||
CA_P0123 | hypothetical protein | 833 | 555.5 | ||||||||
CA_P0124 | Permease, MDR related, probably tetracycline resistance protein | 2063.5 | 1624 | ||||||||
CA_P0125 | hypothetical protein | 693.5 | 846.5 |
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3. array (low scan) | pH 4.5 / Cy3 | ||||||||
ORF | Name | (F 635 median - B635) - B635 SD | (F 532 median - B532) - B532 SD | pH 5.7 / Cy5 | |||||
CA_P0002 | Transglutaminase-like predicted protease domain fused ChW-repeats and cell-adhesion domain | 106.5 | 14.5 | ||||||
CA_P0003 | Transglutaminase-like predicted protease domain fused to ChW-repeats and cell-adhesion domain | 64 | 10 | ||||||
CA_P0004 | Cysteine protease | 167.5 | 4352 | ||||||
CA_P0005 | Uncharacterized protein similar to Bacteriocin immunity protein of mesC/lccI/entI family | 50 | 62.5 | ||||||
CA_P0006 | GntR family HTH transcriptional regulator | 326.5 | 314 | ||||||
CA_P0007 | hypothetical protein | 523.5 | 311 | ||||||
CA_P0009 | Response regulator (CheY + HTH domains) | 197 | 376 | ||||||
CA_P0010 | bgla Beta_glucosidase | 181 | 522.5 | ||||||
CA_P0012 | pedb Pediocin immunity protein, PedB | 1352.5 | 1527.5 | ||||||
CA_P0013 | FAD dependent dehydrogenase | 232.5 | 107.5 | ||||||
CA_P0014 | Protein tyrosine phosphatase II superfamily protein | 534 | 238.5 | ||||||
CA_P0015 | GLPQ related phosphodiesterase | 725.5 | 1011.5 | ||||||
CA_P0018 | hypothetical protein | 9 | 7 | ||||||
CA_P0019 | grkc Spore germination protein, GRKC | 22.5 | 27.5 | ||||||
CA_P0020 | grka Spore germination protein, GRKA | 52 | 85.5 | ||||||
CA_P0025 | pdc Pyruvate decarboxylase | 1341 | 601.5 | ||||||
CA_P0026 | hypothetical protein | 1107 | 650 | ||||||
CA_P0027 | Predicted amino acid permeases | 20.5 | 54 | ||||||
CA_P0028 | HTH transcriptional regulator TetR family | 130 | 41 | ||||||
CA_P0031 | hlyU Transcriptional activator HLYU, HTH of ArsR family | 107 | 77.5 | ||||||
CA_P0032 | Rhodanese-like domain | 42.5 | 10.5 | ||||||
CA_P0033 | hypothetical protein | 105 | 71 | ||||||
CA_P0034 | Rhodanese-like domain | 519 | 591 | ||||||
CA_P0035 | adhe Aldehyde-alcohol dehydrogenase, ADHE1 | 324 | 81 | ||||||
CA_P0036 | Uncharacterized, ortholog of YgaT gene of B.subtillis | 36982.5 | 101.5 | ||||||
CA_P0037 | Uncharacterized, ortholog of YgaS gene of B.subtillis | 27184.5 | 32 | ||||||
CA_P0038 | Uncharacterized conserved protein, YCII family | 153.5 | 22 | ||||||
CA_P0044 | hypothetical protein | 76.5 | 268.5 | ||||||
CA_P0045 | Glycosyl transferase | 84 | 377 | ||||||
CA_P0046 | TetR family HTH transcriptional regulator | 10 | 25 | ||||||
CA_P0047 | Sulphohydrolase/Glycosulfatase, Zn-dependent hydrolase | 31 | 19 | ||||||
CA_P0048 | Related to methyl-accepting chemotaxis protein | 248 | 125.5 | ||||||
CA_P0049 | Permease, MDR related | 33.5 | 69.5 | ||||||
CA_P0050 | pnba Para-nitrobenzyl esterase, a/b hydrolase | 471 | 327.5 | ||||||
CA_P0051 | Oxidoreductase | 37 | 32.5 | ||||||
CA_P0052 | MarR family HTH transcriptional regulator | 28 | 42 | ||||||
CA_P0053 | xynb Xylanase, glycosyl hydrolase family 10 | 102.5 | 2182 | ||||||
CA_P0054 | Xylanase/chitin deacetylase family enzyme | 150 | 2618.5 | ||||||
CA_P0055 | hypothetical protein | 102 | 218.5 | ||||||
CA_P0056 | pell Pectate lyase, secreted, polysaccharide lyase family | 140 | 904 | ||||||
CA_P0057 | Putative glycoportein or S-layer protein | 554.5 | 373.5 | ||||||
CA_P0058 | Rare lipoprotein A RLPA releated protein | 2633.5 | 1793.5 | ||||||
CA_P0059 | Alcohol dehydrogenase | 181.5 | 176 | ||||||
CA_P0061 | hypothetical protein | 18 | 11 | ||||||
CA_P0062 | Hypothetical protein, CF-18 family | 42 | 7.5 | ||||||
CA_P0065 | Predicted secreted metalloprotease | 112.5 | 1834.5 | ||||||
CA_P0066 | ptna Mannose-specific phosphotransferase system component IIAB | 46 | 6 | ||||||
CA_P0067 | manY/levF Mannose/fructose-specific phosphotransferase system component IIC | 40.5 | 7 | ||||||
CA_P0070 | HAD phosphatase superfamily protein | 5 | 16 | ||||||
CA_P0072 | hypothetical protein | 2495 | 384.5 | ||||||
CA_P0073 | ABC ATPase containing transporter | 1289.5 | 145 | ||||||
CA_P0074 | hypothetical protein | 1090.5 | 105.5 | ||||||
CA_P0076 | penicillin binding protein 1A | 320 | 106 | ||||||
CA_P0077 | Uncharacterized Fe-S protein | 4 | 2 | ||||||
CA_P0078 | thil Acetyl coenzyme A acetyltransferase (thiolase) | 66.5 | 29.5 | ||||||
CA_P0079 | thlr ThlR, HTH transcriptional regulator TetR/AcrR family | 267 | 76.5 | ||||||
CA_P0080 | Site-Specific Recombinase, Xerd | 67 | 52.5 | ||||||
CA_P0082 | crp CRP (cyclic AMP receptor protein) regulatory protein | 122.5 | 188 | ||||||
CA_P0083 | SAM-dependent methyltransferase | 365 | 90.5 | ||||||
CA_P0084 | hypothetical protein | 260 | 168.5 | ||||||
CA_P0085 | Hypothetical secreted protein (fragment) | 138.5 | 105 | ||||||
CA_P0086 | Permease, MDR related, probably tetracycline resistance protein | 296.5 | 203.5 | ||||||
CA_P0087 | HTH transcriptional regulator TetR/AcrR family | 853.5 | 930 | ||||||
CA_P0088 | abf 3-oxoacyl-acyl-carrier protein synthase | 941.5 | 1379.5 | ||||||
CA_P0089 | Predicted membrane protein | 36.5 | 80.5 | ||||||
CA_P0090 | ABC-type transporter, ATPase component | 66 | 128.5 | ||||||
CA_P0091 | Predicted regulator of stationary/sporulation gene expression | 257.5 | 291.5 | ||||||
CA_P0093 | tnpa TnpA, transposase (3' segment) | 98.5 | 66.5 | ||||||
CA_P0094 | TnpA, transposase (5' segment) | 104.5 | 29 | ||||||
CA_P0096 | ipyr Inorganic pyrophosphatase | 204 | 129 | ||||||
CA_P0097 | lipg Carboxyl esterase, a/b hydrolase | 671.5 | 391 | ||||||
CA_P0098 | amyA alpha-amylase | 81 | 36.5 | ||||||
CA_P0099 | muts DNA mismatch repair protein, MUTS fragment | 11 | 11 | ||||||
CA_P0100 | HTH transcriptional regulator TetR/AcrR family | 85 | 189.5 | ||||||
CA_P0101 | hypothetical protein | 58.5 | 158.5 | ||||||
CA_P0102 | Membrane protein | 197.5 | 1702 | ||||||
CA_P0103 | arsr Transcriptional regulator HTH-type, ArsR family | 68.5 | 77.5 | ||||||
CA_P0104 | arsb Heavy metal resistance membrane protein | 72.5 | 117.5 | ||||||
CA_P0105 | arsc Arsenate reductase, arsC, protein-tyrosine-phosphatase family enzyme | 81 | 195 | ||||||
CA_P0106 | dxs 1-deoxyxylulose-5-phosphate synthase, dehydrogenase | 27 | 15 | ||||||
CA_P0107 | HTH transcriptional regulator MerR family | 50 | 36.5 | ||||||
CA_P0108 | Predicted HTH containing transcriptional regulator | 111 | 105.5 | ||||||
CA_P0110 | NH2-acetyltransferase | 52.5 | 66.5 | ||||||
CA_P0111 | NH2-acetyltransferase | 15 | 23.5 | ||||||
CA_P0112 | hypothetical protein | 838.5 | 4584.5 | ||||||
CA_P0113 | Solo B3/4 domain (OB-fold DNA/RNA-binding) of Phe-aaRS-beta | 990.5 | 461.5 | ||||||
CA_P0114 | Possible beta-xylosidase, family 43 of glycosyl hydrolases | 36 | 37.5 | ||||||
CA_P0116 | Xylanase, glycosyl hydrolase family 10 | 59 | 217 | ||||||
CA_P0117 | Possible beta-xylosidase diverged, family 5/39 of glycosyl hydrolases and alpha-amylase C (Greek key) C-terminal domain | 55 | 251.5 | ||||||
CA_P0118 | Possible xylan degradation enzyme (glycosyl hydrolase family 30-like domain and Ricin B-like domain) | 38 | 244 | ||||||
CA_P0119 | Possible xylan degradation enzyme (glycosyl hydrolase family 30-like domain and Ricin B-like domain) | 24.5 | 189.5 | ||||||
CA_P0120 | Possible xylan degradation enzyme (glycosyl hydrolase family 43-like domain, cellulose-binding domain and Ricin B-like domain) | 28 | 211.5 | ||||||
CA_P0121 | Leu-rich protein family protein, YaeG (E.coli) homolog | 1 | 7 | ||||||
CA_P0123 | hypothetical protein | 127.5 | 96 | ||||||
CA_P0124 | Permease, MDR related, probably tetracycline resistance protein | 507 | 909.5 | ||||||
CA_P0125 | hypothetical protein | 223 | 119 | ||||||
CA_P0126 | Uncharacterized protein (NN.term domain homologous to B.subtilis (gi|833839) | 271 | 159 | ||||||
CA_P0127 | HTH transcriptional regulator TetR family | 62 | 29 |
A
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D
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300
CAC0080 | agrC Histidine kinase-like ATPase | 209.5 | 135 | ||||||
CAC0081 | agrA Accessory gene regulator protein A | 126 | 122 | ||||||
CAC0082 | Predicted membrane protein | 5282.5 | 7680.5 | ||||||
CAC0083 | PemK family of DNA-binding proteins | 156.5 | 146.5 | ||||||
CAC0084 | MutT/Nudix family hydrolase | 397 | 225 | ||||||
CAC0085 | hypothetical protein | 33 | 18.5 | ||||||
CAC0086 | Muconate cycloisomerase related protein, ortholog of YKGB B.subtilis | 26.5 | 89 | ||||||
CAC0087 | Predicted Co/Zn/Cd cation transporter | 341.5 | 355 | ||||||
CAC0088 | methionine sulfoxide reductase A | 538.5 | 653 | ||||||
CAC0089 | serA D-3 phosphoglycerate dehydrogenase | 438 | 644.5 | ||||||
CAC0090 | Xylanase/chitin deacetylase, NodB family | 345 | 457.5 | ||||||
CAC0091 | ilvC ketol-acid reductoisomerase | 7309 | 6284 | ||||||
CAC0092 | Uncharacterized predicted membrane protein, YTWI B.subtilis ortholog | 52 | 24 | ||||||
CAC0093 | Transcriptional regulators, LysR family | 17 | 19 | ||||||
CAC0094 | Ferredoxin-nitrite reductase | 2634 | 2215.5 | ||||||
CAC0095 | hemA glutamyl-tRNA reductase | 492 | 252 | ||||||
CAC0096 | hemW precorrin-2 dehydrogenase | 507 | 215 | ||||||
CAC0097 | hemC porphobilinogen deaminase | 717 | 344 | ||||||
CAC0098 | hemD Uroporphyrinogen III syntase | 817.5 | 418 | ||||||
CAC0099 | hemL glutamate-1-semialdehyde aminotransferase | 1085.5 | 503.5 | ||||||
CAC0100 | hemB delta-aminolevulinic acid dehydratase | 638 | 344 | ||||||
CAC0101 | Methyl-accepting chemotaxis protein | 9 | 3 | ||||||
CAC0111 | Glutamine-binding periplasmic protein fused to glutamine permease | 1157.5 | 772.5 | ||||||
CAC0112 | glnQ glutamine ABC transporter (ATP-binding protein) | 1253 | 830.5 | ||||||
CAC0113 | Transcriptional regulator of sugar metabolism | 576.5 | 475.5 | ||||||
CAC0114 | Predicted membrane protein | 802 | 735.5 | ||||||
CAC0115 | Uncharacterized protein, Yje/RRF2 family | 4136.5 | 4194 | ||||||
CAC0116 | Carbone-monoxide dehydrogenase, beta chain | 5626 | 2400.5 | ||||||
CAC0117 | protein cheY homolog | 57 | 18 | ||||||
CAC0118 | cheA Chemotaxis protein cheA | 40.5 | 10 | ||||||
CAC0119 | cheW Chemotaxis protein cheW | 59 | 15 | ||||||
CAC0120 | Membrane-associated methyl-accepting chemotaxis protein with HAMP domain | 55 | 4 | ||||||
CAC0121 | cheR Chemotaxis protein methyltransferase (cheR) | 39 | 2 | ||||||
CAC0122 | cheY Chemotaxis respons regulator (cheY) | 214 | 227.5 | ||||||
CAC0123 | Cytosine deaminase | 58 | 58 | ||||||
CAC0125 | dnaX DNA polymerase III subunits gamma and tau | 199 | 273 | ||||||
CAC0126 | hypothetical protein | 919 | 1038.5 | ||||||
CAC0127 | recR recombination protein RecR | 554 | 715.5 | ||||||
CAC0128 | hypothetical protein | 375 | 366.5 | ||||||
CAC0129 | bofA BofA B.subtilis ortholog, SigmaK-factor processing regulatory protein | 189 | 133 | ||||||
CAC0130 | Uncharacterized membrane protein, YTAF B.subtilis ortholog | 14 | 1 | ||||||
CAC0132 | hypothetical protein | 15 | 10 | ||||||
CAC0134 | Hypothetical protein, CF-19 family | 15 | 25 | ||||||
CAC0138 | ABC transporter, ATP-binding component | 1204.5 | 1057.5 | ||||||
CAC0139 | Predicted permease | 1306 | 1106 | ||||||
CAC0140 | Predicted permease | 1626 | 1543 | ||||||
CAC0141 | Membrane permease, predicted cation efflux pumps | 1471.5 | 1381 | ||||||
CAC0144 | sfsa sugar fermentation stimulation protein | 89.5 | 131.5 | ||||||
CAC0145 | N-terminal Zn-ribbon domain and C-terminal MutT domain, YJAD ortholog | 81.5 | 196 | ||||||
CAC0146 | Related to ABC transporter permease component | 6563.5 | 2388 | ||||||
CAC0147 | ABC transporter, ATP-binding protein | 5647.5 | 2297.5 | ||||||
CAC0148 | Predicted enzyme with TIM-barrel fold | 244 | 183 | ||||||
CAC0149 | hypothetical protein | 17 | 347 | ||||||
CAC0150 | hypothetical protein | 55.5 | 72.5 | ||||||
CAC0151 | Predicted SAM dependent methyltransferase | 112 | 135.5 | ||||||
CAC0152 | Ribosomal-protein-alanine acetyltransferase (acetylating enzyme for N-terminal of ribosomal protein S5) | 185.5 | 158 | ||||||
CAC0153 | Beta-phosphoglucomutase, putative | 19.5 | 10 | ||||||
CAC0158 | glmS D-fructose-6-phosphate amidotransferase | 228 | 474.5 | ||||||
CAC0159 | hypothetical protein | 58 | 72.5 | ||||||
CAC0160 | Predicted acetyltransferase | 64.5 | 54.5 | ||||||
CAC0162 | Transcriptional regulator MarR/EmrR family | 105 | 41.5 | ||||||
CAC0164 | ABC transporter, ATP binding-protein | 67 | 227 | ||||||
CAC0165 | Predicted ABC transporter, permease component | 98.5 | 250 | ||||||
CAC0167 | Possible sigma factor, diverged member of sigF/sigE/sigG family | 124.5 | 84 | ||||||
CAC0168 | T-RNA-processing ribonuclease BN | 61.5 | 73 | ||||||
CAC0174 | Response regulator, CheY-like receiver domain and HTH DNA-binding domain | 77.5 | 51 | ||||||
CAC0175 | hypothetical protein | 78.5 | 136.5 | ||||||
CAC0176 | appA Oligopeptide-binding protein, periplasmic component | 78 | 147 | ||||||
CAC0177 | appB Oligopeptide transport permease protein | 59 | 75.5 | ||||||
CAC0178 | appC Oligopeptide transport permease protein | 128 | 102.5 | ||||||
CAC0179 | appD Oligopeptide transport ATP-binding protein | 95.5 | 101.5 | ||||||
CAC0180 | appF Oligopeptide ABC transporter, ATP-binding protein | 51.5 | 76 | ||||||
CAC0181 | Similar to beta-lactamase | 122.5 | 119.5 | ||||||
CAC0182 | Beta-glucosidase homolog | 46 | 75 | ||||||
CAC0183 | Transcriptional regulators of NagC/XylR (ROK) family, sugar kinase | 31 | 64 | ||||||
CAC0184 | Predicted acetyltransferase | 30.5 | 55.5 | ||||||
CAC0186 | Xre family DNA-binding domain and TPR-repeat-containing protein | 527 | 90 | ||||||
CAC0187 | nagB glucosamine-6-phosphate deaminase | 94.5 | 153.5 | ||||||
CAC0188 | nagA N-acetylglucosamine-6-phosphate deacetylase (gene nagA) | 133 | 245.5 | ||||||
CAC0189 | Similar to transcriptional regulator, GntR family | 112.5 | 198 | ||||||
CAC0192 | Similar to chloromuconate cycloisomerase | 40 | 34.5 | ||||||
CAC0193 | Uncharacterized conserved membrane protein, affecting LPS biosynthesis | 1151.5 | 284 | ||||||
CAC0194 | Glycosyltransferase involved in cell wall biogenesis | 1312 | 296.5 | ||||||
CAC0195 | Predicted transcriptional regulator | 36.5 | 25 | ||||||
CAC0196 | NADH-dependent flavine oxidoreductase | 61.5 | 98 | ||||||
CAC0197 | Transcriptional regulator, MarR/EmrR family | 28 | 23 | ||||||
CAC0198 | Uncharacterized membrane protein, ortholog YYAS B.subtilis | 30 | 43 | ||||||
CAC0200 | Uncharacterized membrane protein | 28 | 6 | ||||||
CAC0201 | Transcriptional regulators, AcrR family | 53.5 | 105.5 | ||||||
CAC0202 | Hydrolase of the alpha/beta superfamily | 27 | 10 | ||||||
CAC0203 | flavodoxin | 50 | 21 | ||||||
CAC0204 | srta Sortase (surface protein transpeptidase), YHCS B.subtilis ortholog | 112 | 248.5 | ||||||
CAC0205 | Predicted phosphohydrolase, Icc family | 4846 | 7782 | ||||||
CAC0206 | hypothetical protein | 215.5 | 348 | ||||||
CAC0207 | Hypothetical protein, CF-6 family | 1029 | 1324.5 | ||||||
CAC0209 | Predicted membrane protein, CF-20 family | 4 | 14 | ||||||
CAC0210 | bioB Biotine synthase (gene bioB) | 6.5 | 11 | ||||||
CAC0212 | Biotin-(acetyl-CoA carboxylase) ligase | 187.5 | 191 | ||||||
CAC0214 | Endoglucanase, aminopeptidase M42 family | 110 | 166 | ||||||
CAC0215 | Endoglucanase, aminopeptidase M42 family | 74 | 110.5 |