Selected Cell
Cell:
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Read me_data
Transcriptome_data
Read me_amounts
1. Array
2. Array
3. Array
4. Array
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Description: | This data-sheet reflects the transcriptome of C. acetobutylicum concerning the comparison of acidogenesis to solventogenesis. Genes with average fold regulation > 1.0 (significant > 3.0) showed elevated transcript level in the acidogenesis (pH 5.7) or repressed transcript level in the solventogenesis (pH 4.5), respectively. Genes were figured out as significant induced, if the average fold regulation was > 3.0 and at least three out of four micro arrays were > 2.0.Furthermore, genes with fold regulation < 1.0 (significant < 0.33) showed elevated transcript level in the solventogenesis (pH 4.5) or repressed transcript level in the acidogenesis (pH 5.7), respectively. Genes were figured out as significant induced, if the average fold regulation was < 0.33 and at least three out of four micro arrays were < 0.5. | ||||||||
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CAC3486 | Multimeric flavodoxin WrbA family protein | 0.971 | 1.040582726326743 | 0.699 | 0.9035275754422476 | 0.1805106251387411 | |||
CAC3487 | Predicted transcriptional regulator | 1.4905 | 1.4295925661186561 | 1.265 | 0.6182380216383307 | 1.2008326469392467 | 0.3999050815216579 | ||
CAC3492 | hypothetical protein | 1.1135 | 1.1166945840312674 | 1.718 | 1.532567049808429 | 1.3701904084599241 | 0.3041314323451744 | ||
CAC3493 | Predicted transcriptional regulator component, YOBU B,subtilis homolog | 1.245 | 1.273074474856779 | 1.6085 | 1.6488046166529264 | 1.4438447728774264 | 0.21433744405026184 | ||
CAC3494 | Transcription regulator, YOBV B,subtilis homolog | 1.3445 | 1.3869625520110958 | 1.9455252918287937 | 1.55899594794663 | 0.33541685607957206 | |||
CAC3495 | Multimeric flavodoxin WrbA family protein | 0.9475 | 0.9866798223976319 | 1.521 | 1.9980019980019978 | 1.3632954550999075 | 0.4974764029118507 | ||
CAC3499 | Predicted endonuclease | 0.22200000000000003 | 5.2493438320209975 | 0.345 | 1.9387812773403326 | 2.8676908081835335 | |||
CAC3502 | Transcriptional regulator, fadR family | 1.0195 | 0.970402717127608 | 0.854 | 0.664672648720505 | 0.8771438414620283 | 0.15773621324511117 | ||
CAC3503 | Nucleoside-diphosphate-sugar epimerase | 0.7755000000000001 | 1.287001287001287 | 0.46799999999999997 | 0.5393743257820928 | 0.7674689031958449 | 0.3704443982414113 | ||
CAC3504 | Transcriptional regulator, AcrR family | 0.91 | 0.7510326699211415 | 0.7815000000000001 | 0.484613520717228 | 0.7317865476595924 | 0.17860233332615985 | ||
CAC3506 | Predicted MDR-type permease | 0.668 | 1.1869436201780414 | 1.1645 | 0.9398496240601504 | 0.9898233110595479 | 0.241823609861827 | ||
CAC3507 | Transcriptional regulator, MerR family | 1.47 | 1.4144271570014144 | 1.318 | 0.9199632014719411 | 1.280597589618339 | 0.2484885834938947 | ||
CAC3512 | AraC-type DNA-binding domain-containing protein | 1.1995 | 1.1574074074074074 | 1.1255 | 0.871839581517001 | 1.0885617472311022 | 0.14762559904699962 | ||
CAC3513 | hypothetical protein | 1.1235 | 0.964785335262904 | 0.673 | 0.5837711617046117 | 0.8362641242418789 | 0.25128338610697387 | ||
CAC3516 | Membrane-associated histidine kinase with HAMP domain | 1.291 | 1.3802622498274673 | 1.039 | 0.9149130832570906 | 1.1562938332711394 | 0.21627922752028636 | ||
CAC3517 | Response regulator (CheY-like receiver domain and HTH-type DNA-binding domain) | 1.4375 | 1.7167381974248928 | 1.0925 | 0.9380863039399626 | 1.2962061253412138 | 0.34955074722138196 | ||
CAC3518 | Transcriptional regulators, AcrR family | 1.7469999999999999 | 1.8132366273798728 | 1.0985 | 0.8888888888888888 | 1.3869063790671903 | 0.4628263016413389 | ||
CAC3519 | Predicted membrane protein, possible permease | 2.121 | 2.5412960609911055 | 1.125 | 0.8972633467922835 | 1.6711398519458471 | 0.7867018842525304 | ||
CAC3520 | ABC-type transport system, ATPase component | 2.7515 | 2.5673940949935816 | 1.7679999999999998 | 1.027221366204417 | 2.0285288652994993 | 0.7923709137312068 | ||
CAC3521 | hypothetical protein | 1.4785 | 1.497005988023952 | 1.86 | 2.030456852791878 | 1.7164907102039575 | 0.27324151488083503 | ||
CAC3522 | Hypothetical protein, CF-7 family | 2.041 | 1.9569471624266144 | 2.5404999999999998 | 2.2522522522522523 | 2.1976748536697164 | 0.26013112366399843 | ||
CAC3523 | Hypothetical protein, CF-7 family | 1.696 | 1.9120458891013383 | 2.1995 | 2.4479804161566707 | 2.063881576314502 | 0.3287933523832148 | ||
CAC3524 | Hypothetical protein, CF-7 family | 1.2075 | 1.2430080795525171 | 1.9865 | 1.7256255392579813 | 1.5406584047026246 | 0.3797270105610485 | ||
CAC3525 | Uncharacterized conserved protein, YjeB/RRF2 family | 1.0514999999999999 | 0.8912655971479502 | 2.026 | 1.0741138560687433 | 1.2607198633041734 | 0.5166381375584468 | ||
CAC3526 | FMN-binding protein | 0.2975 | 0.22067747986317998 | 0.4005 | 0.36852773171181136 | 0.32180130289374786 | 0.07998630087492575 | ||
CAC3527 | Ferredoxin | 0.3245 | 0.2972209838014564 | 0.3645 | 0.4015257980325236 | 0.346936695458495 | 0.0456928042289614 | ||
CAC3528 | hypothetical protein | 0.999 | 1.218769043266301 | 0.655 | 0.8849557522123894 | 0.9394311988696725 | 0.23483806800943352 | ||
CAC3529 | hypothetical protein | 0.7464999999999999 | 1.3063357282821684 | 1.1465 | 0.8718395815170008 | 1.0177938274497924 | 0.25477093640278237 | ||
CAC3530 | hypothetical protein | 1.226 | 0.970873786407767 | 1.5455 | 1.026694045174538 | 1.1922669578955762 | 0.2597054908752886 | ||
CAC3532 | hypothetical protein | 0.5655 | 0.4939491232403063 | 1.194 | 0.8271298593879238 | 0.7701447456570575 | 0.3167880856283681 | ||
CAC3534 | Site-specific modification DNA-methyltransferase | 0.7235 | 0.6657789613848203 | 1.5905 | 1.2232415902140672 | 1.050755137899722 | 0.43832205593658913 | ||
CAC3535 | Type II restriction enzyme, methylase subunit | 1.052 | 0.7094714437743881 | 1.5925 | 0.7704160246533127 | 1.0310968671069252 | 0.40290935007892487 | ||
CAC3536 | hypothetical protein | 0.28200000000000003 | 0.2488800398208064 | 0.638 | 0.40950040950040945 | 0.394595112330304 | 0.17642623472937008 | ||
CAC3537 | hypothetical protein | 0.3965 | 0.26202017555351764 | 2.0965 | 0.7347538574577517 | 0.8724435082528172 | 0.8399229335830375 | ||
CAC3538 | Metallo-beta-lactamase superfamily hydrolase | 1.3045 | 1.0368066355624677 | 2.543 | 1.6722408026755853 | 1.6391368595595133 | 0.6564673066784452 | ||
CAC3539 | murA UDP-N-acetylglucosamine 1-carboxyvinyltransferase | 0.976 | 0.948316737790422 | 2.5155000000000003 | 1.721170395869191 | 1.5402467834149034 | 0.7422056771340754 | ||
CAC3541 | 2'-5' RNA ligase family protein, diverged | 1.2815 | 1.3271400132714 | 1.545 | 1.4534883720930234 | 1.4017820963411058 | 0.1200335094126887 | ||
CAC3542 | hypothetical protein | 1.0285 | 0.8888888888888888 | 0.465 | 0.4518752824220515 | 0.708566042827735 | 0.2944422011532482 | ||
CAC3543 | Predicted membrane protein | 1.389 | 1.8365472910927456 | 0.729 | 1.1675423234092235 | 1.2805224036254923 | 0.46111188975658857 | ||
CAC3544 | Membrane associated GGDEF domain containing protein | 0.8685 | 0.8550662676357418 | 1.6775 | 1.7953321364452421 | 1.299099601020246 | 0.5072853269176056 | ||
CAC3545 | Methyl-accepting chemotaxis protein | 0.5045 | 1.7621145374449338 | 0.6575 | 0.9940357852882704 | 0.9795375806833009 | 0.5603587534264293 | ||
CAC3548 | Uncharacterized conserved Zn-finger containing protein | 1.1555 | 1.0689470871191875 | 1.321 | 0.9610764055742431 | 1.1266308731733576 | 0.15204000006868124 | ||
CAC3550 | natB Na+ ABC transporter, NATB | 1.075 | 1.0405827263267429 | 1.1745 | 0.9302325581395348 | 1.0550788211165694 | 0.10075547541366695 | ||
CAC3551 | natA Na+ ABC transporter (ATP-binding protein), NATA | 1.045 | 0.9363295880149812 | 1.286 | 0.8525149190110827 | 1.029961126756516 | 0.18800362940695922 | ||
CAC3553 | Transcriptional regulator (LacI family) | 1.2465000000000002 | 1.2746972594008923 | 0.9635 | 0.7518796992481203 | 1.0591442396622532 | 0.24841135483082616 | ||
CAC3554 | Siderophore/Surfactin synthetase related protein | 1.7834999999999999 | 1.6488046166529264 | 0.868 | 0.7468259895444361 | 1.2617826515493407 | 0.5298490771126844 | ||
CAC3555 | Nitroreductase family protein | 1.187 | 1.1019283746556474 | 0.773 | 0.947867298578199 | 1.0024489183084615 | 0.1821914956979341 | ||
CAC3556 | Probable S-layer protein | 0.7275 | 0.9596928982725528 | 0.792 | 0.7861635220125786 | 0.8163391050712828 | 0.09990938304894505 | ||
CAC3558 | Probable S-layer protein | 1.063 | 0.9136592051164916 | 1.459 | 0.728066982162359 | 1.0409315468197127 | 0.3105643964092824 | ||
CAC3559 | Uncharacterized conserved membrane protein, YHBJ B,subtilis (possible permease)ortholog | 1.5055 | 1.21580547112462 | 1.5379999999999998 | 0.7958615200955034 | 1.2637917478050307 | 0.3439352775862088 | ||
CAC3560 | ABC-type transporter, ATPase component | 1.8655 | 1.567398119122257 | 1.643 | 0.9013068949977466 | 1.4943012535300009 | 0.4150844442572863 | ||
CAC3561 | ABC-type transporter, permease component | 1.5219999999999998 | 1.5140045420136259 | 1.218 | 1.0230179028132993 | 1.319255611206731 | 0.24292791242988607 | ||
CAC3562 | HD superfamily hydrolase | 1.162 | 1.156737998843262 | 0.8295 | 0.8223684210526316 | 0.9926516049739733 | 0.192542664088501 | ||
CAC3563 | Mismatch repair protein MutS-like ATPase | 1.1440000000000001 | 1.037344398340249 | 1.3795 | 0.6542361792607131 | 1.0537701444002405 | 0.3022904564070425 | ||
CAC3565 | Uncharacterized secreted protein, containing cell adhesion domain | 0.5075 | 0.5699629524080935 | 0.4375 | 0.3692762186115214 | 0.47105979275490373 | 0.08678686411472493 | ||
CAC3567 | topB Topoisomerase B | 0.915 | 0.7843137254901962 | 1.428 | 0.8399832003359932 | 0.9918242314565473 | 0.29567300204873026 | ||
CAC3568 | accA Acetyl-CoA carboxylase alpha subunit | 1.1880000000000002 | 1.0887316276537833 | 1.583 | 1.1520737327188941 | 1.2529513400931693 | 0.22382671877252625 | ||
CAC3569 | accD Acetyl-CoA carboxylase beta subunit | 1.164 | 1.2812299807815504 | 1.733 | 1.0893246187363834 | 1.3168886498794834 | 0.28843284828709836 | ||
CAC3570 | accC acetyl-CoA carboxylase | 1.658 | 1.3245033112582782 | 2.12 | 0.9910802775024778 | 1.523395897190189 | 0.48200031109427305 | ||
CAC3571 | fabZ (3R)-hydroxymyristoyl ACP dehydratase | 1.51 | 1.4275517487508922 | 1.8820000000000001 | 1.1675423234092235 | 1.4967735180400292 | 0.2953863092572365 | ||
CAC3572 | accB Biotin carboxyl carrier protein of acetyl-CoA carboxylase | 1.4115 | 1.2285012285012284 | 1.7375 | 1.1267605633802817 | 1.3760654479703776 | 0.2682155024269436 | ||
CAC3573 | fabF 3-oxoacyl-(acyl carrier protein) synthase | 1.3639999999999999 | 1.0770059235325795 | 2.184 | 1.1210762331838564 | 1.4365205391791092 | 0.5140494924292196 | ||
CAC3574 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase | 1.5285 | 1.0615711252653928 | 2.1189999999999998 | 1.1607661056297156 | 1.467459307723777 | 0.4785523923512872 | ||
CAC3575 | fabD acyl-carrier-protein S-malonyltransferase | 1.4569999999999999 | 1.2019230769230769 | 1.798 | 1.0970927043335161 | 1.3885039453141481 | 0.3120425505868514 | ||
CAC3576 | Dioxygenase related to 2-nitropropane dioxygenase | 1.189 | 1.1655011655011656 | 2.035 | 1.0752688172043012 | 1.3661924956763667 | 0.4485585264923023 | ||
CAC3577 | acp Acyl Carrier Protein, ACP | 1.4315 | 1.2738853503184713 | 2.1755 | 1.1267605633802817 | 1.5019114784246883 | 0.465980470567074 | ||
CAC3578 | fabH 3-oxoacyl-(acyl carrier protein) synthase | 1.139 | 1.0723860589812333 | 1.8904999999999998 | 1.2961762799740764 | 1.3495155847388274 | 0.37266016889959275 | ||
CAC3579 | Transcriptional regulator, MarR/EmrR family | 1.37 | 1.3131976362442546 | 1.6844999999999999 | 1.314924391847469 | 1.4206555070229308 | 0.1778633928746188 | ||
CAC3580 | Dioxygenase related to 2-nitropropane dioxygenase | 1.0845 | 0.9828009828009827 | 2.178 | 1.3315579227696406 | 1.3942147263926556 | 0.542656954353481 | ||
CAC3581 | HAD superfamily hydrolase | 1.318 | 0.9905894006934125 | 2.7984999999999998 | 1.4705882352941178 | 1.6444194089968827 | 0.7950183641084383 | ||
CAC3583 | Predicted permease | 3.512 | 3.1746031746031744 | 2.5575 | 2.6954177897574123 | 2.984880241090147 | 0.43980769014793686 | ||
CAC3586 | cinA competence damage-inducible protein A | 0.7315 | 0.864677907479464 | 0.998 | 1.1737089201877933 | 0.9419717069168143 | 0.18895676444128148 | ||
CAC3587 | DNA replication protein DnaD | 1.66 | 1.2618296529968454 | 2.6385 | 1.7730496453900708 | 1.833344824596729 | 0.5798242218401343 | ||
CAC3588 | DNA replication protein DnaC | 1.596 | 1.3840830449826989 | 1.8405 | 1.6764459346186085 | 1.624257244900327 | 0.1897074121404123 | ||
CAC3589 | Uncharacterized conserved membrane protein, YHGE B,subtilis ortholog | 1.93 | 1.7636684303350971 | 0.9295 | 0.987166831194472 | 1.4025838153823922 | 0.5179863248132736 | ||
CAC3590 | Predicted flavoprotein, YhiN family | 0.5925 | 1.2936610608020698 | 0.358 | 0.6673340006673341 | 0.7278737653673509 | 0.3995468205529961 | ||
CAC3591 | Acyl-ACP thioesterase | 0.8634999999999999 | 0.7079646017699115 | 0.639 | 0.4430660168365086 | 0.663382654651605 | 0.17432578377294652 | ||
CAC3592 | Hypothetical protein, CF-27 family | 1.6375 | 1.2978585334198574 | 0.925 | 0.7064641469445426 | 1.1417056700911 | 0.41093075865087597 | ||
CAC3593 | purA Adenylosuccinate synthase | 1.096 | 1.07469102632993 | 3.0895 | 1.858736059479554 | 1.779731771452371 | 0.9462744629362173 | ||
CAC3594 | Glycosyltransferase | 1.2065000000000001 | 1.1743981209630066 | 2.1215 | 1.3869625520110958 | 1.4723401682435258 | 0.44277092764734766 | ||
CAC3595 | Uncharacterized FAD-dependent dehydrogenase | 1.109 | 1.1855364552459988 | 1.9020000000000001 | 1.3888888888888888 | 1.3963563360337221 | 0.357188075421608 | ||
CAC3596 | pgsA Phosphatidylglycerophosphate synthase | 1.366 | 1.2476606363069245 | 0.3635 | 0.33411293017039756 | 0.8278183916193307 | 0.5553508216986169 | ||
CAC3597 | Rubrerythrin | 0.7044999999999999 | 0.6476683937823834 | 5.0615000000000006 | 1.001001001001001 | 1.8536673486958462 | 2.144158676794958 | ||
CAC3599 | hypothetical protein | 0.647 | 0.6995452955578874 | 0.285 | 0.2600442075152776 | 0.4728973757682912 | 0.23258897821785318 | ||
CAC3600 | dapA dihydrodipicolinate synthase | 0.35850000000000004 | 0.43308791684711995 | 0.368 | 0.5309264666843643 | 0.4226285958828711 | 0.07944513098823336 | ||
CAC3601 | Nudix (MutT) family hydrolase | 1.2014999999999998 | 1.0256410256410258 | 1.583 | 1.1702750146284375 | 1.2451040100673658 | 0.2379344376071024 | ||
CAC3602 | HD superfamily hydrolase | 0.9644999999999999 | 1.07469102632993 | 1.4060000000000001 | 1.287001287001287 | 1.1830480783328043 | 0.20001528460702123 | ||
CAC3603 | Transcriptional regulator, FadR family | 1.263 | 1.4388489208633095 | 0.9505 | 1.372683596431023 | 1.256258129323583 | 0.21635447227021115 | ||
CAC3611 | Regulatory protein related to malT, positive regulator of mal regulon (ATPase and HTH-type DNA-binding domain) | 1.0345 | 1.0700909577314073 | 0.9495 | 0.9411764705882353 | 0.9988168570799105 | 0.06352912890815213 | ||
CAC3612 | hypothetical protein | 0.2725 | 0.23334500058336252 | 0.2175 | 0.26226068712300027 | 0.2464014219265907 | 0.0254192472855682 | ||
CAC3613 | hypothetical protein | 0.324 | 0.2809383340356792 | 0.6255 | 0.3253090435914119 | 0.38893684440677273 | 0.15905040671090126 | ||
CAC3617 | Uncharacterized membrane protein, YHAG B,subtilis homolog | 0.687 | 0.6514657980456027 | 0.1585 | 0.19557989438685702 | 0.42313642310811495 | 0.28494016966645797 | ||
CAC3618 | ABC-type polar amino acid transport system, ATPase component | 7.332 | 6.410256410256411 | 0.7989999999999999 | 1.7528483786152498 | 4.073526197217915 | 3.2754657157909075 | ||
CAC3619 | Amino acid ABC transporter, permease component | 4.750500000000001 | 4.694835680751174 | 1.064 | 1.8264840182648399 | 3.0839549247540035 | 1.9177904192562625 | ||
CAC3620 | Amino acid (probably glutamine) ABC transporter, periplasmic binding protein component | 5.7095 | 4.9504950495049505 | 1.266 | 1.8416206261510129 | 3.4419039189139906 | 2.2145957996660797 | ||
CAC3622 | Possible subunit of benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase | 0.853 | 0.6925207756232687 | 0.536 | 0.42562247286656735 | 0.6267858121224591 | 0.1863712218189484 | ||
CAC3623 | Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain) | 0.8335 | 0.9429514380009429 | 0.4345 | 0.4107619634421853 | 0.6554283503607821 | 0.2726719733870114 | ||
CAC3624 | 6-pyruvoyl-tetrahydropterin synthase | 0.9784999999999999 | 0.8783487044356609 | 0.568 | 0.4727014890096904 | 0.7243875483613378 | 0.24226714828331145 | ||
CAC3625 | Fe-S oxidoreductase of MoaA family | 1.061 | 0.9492168960607498 | 0.6145 | 0.4918839153959666 | 0.7791502028641791 | 0.26956359639196154 | ||
CAC3626 | folE GTP cyclohydrolase I | 1.036 | 0.9363295880149812 | 0.6485000000000001 | 0.5610098176718092 | 0.7954598514216976 | 0.22676556324476327 |
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Description: | The single sheets contain the transcript amount of the genes for all four microarrays (sheet 1 to 4). The first biological experiment will be represented by the 1. and 2. array. The 3. and 4. array showed the transcript level of the second biological experiment. The 1. and 3. array the cDNA of pH 4.5 was labeled by Cy3 and pH 5.7 by Cy5, respectively. The 2. and 4. array contained the transcript level of the dyeflip (pH 4.5 Cy5 / pH 5.7 Cy3). Furthermore, the 1. and 2. array were evaluated under high scanning conditions and the 3. and 4. array under low scanning conditions. | ||||||||
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1. Array (high Scan) | pH 4.5 / Cy3 | ||||||||
ORF | Name | (F 635 median - B635) - B635 SD | (F 532 median - B532) - B532 SD | pH 5.7 / Cy5 | |||||
CA_P0002 | Transglutaminase-like predicted protease domain fused ChW-repeats and cell-adhesion domain | 373.5 | 279 | ||||||
CA_P0003 | Transglutaminase-like predicted protease domain fused to ChW-repeats and cell-adhesion domain | 266 | 109 | ||||||
CA_P0004 | Cysteine protease | 415.5 | 20426.5 | ||||||
CA_P0005 | Uncharacterized protein similar to Bacteriocin immunity protein of mesC/lccI/entI family | 340.5 | 101.5 | ||||||
CA_P0006 | GntR family HTH transcriptional regulator | 1748.5 | 1721 | ||||||
CA_P0007 | hypothetical protein | 1246 | 1028 | ||||||
CA_P0009 | Response regulator (CheY + HTH domains) | 445 | 1880 | ||||||
CA_P0010 | bgla Beta_glucosidase | 660 | 2242.5 | ||||||
CA_P0012 | pedb Pediocin immunity protein, PedB | 3038 | 3942 | ||||||
CA_P0013 | FAD dependent dehydrogenase | 1007.5 | 603 | ||||||
CA_P0014 | Protein tyrosine phosphatase II superfamily protein | 1855 | 1464.5 | ||||||
CA_P0015 | GLPQ related phosphodiesterase | 3905.5 | 3969 | ||||||
CA_P0018 | hypothetical protein | 63 | 32 | ||||||
CA_P0019 | grkc Spore germination protein, GRKC | 129 | 127.5 | ||||||
CA_P0020 | grka Spore germination protein, GRKA | 168 | 213.5 | ||||||
CA_P0024 | MarR family HTH transcriptional regulator | 95 | 81 | ||||||
CA_P0025 | pdc Pyruvate decarboxylase | 5988 | 5220.5 | ||||||
CA_P0026 | hypothetical protein | 5853.5 | 5351 | ||||||
CA_P0027 | Predicted amino acid permeases | 235.5 | 219.5 | ||||||
CA_P0028 | HTH transcriptional regulator TetR family | 657 | 496 | ||||||
CA_P0031 | hlyU Transcriptional activator HLYU, HTH of ArsR family | 458.5 | 346 | ||||||
CA_P0032 | Rhodanese-like domain | 257.5 | 247 | ||||||
CA_P0033 | hypothetical protein | 411.5 | 417.5 | ||||||
CA_P0034 | Rhodanese-like domain | 2115 | 2481 | ||||||
CA_P0035 | adhe Aldehyde-alcohol dehydrogenase, ADHE1 | 2648.5 | 850.5 | ||||||
CA_P0036 | Uncharacterized, ortholog of YgaT gene of B,subtillis | 46107.5 | 445 | ||||||
CA_P0037 | Uncharacterized, ortholog of YgaS gene of B,subtillis | 46444.5 | 354.5 | ||||||
CA_P0038 | Uncharacterized conserved protein, YCII family | 988.5 | 178.5 | ||||||
CA_P0040 | Xre family DNA-binding domain and TPR repeats containing protein | 403 | 1927.5 | ||||||
CA_P0044 | hypothetical protein | 208 | 1194.5 | ||||||
CA_P0045 | Glycosyl transferase | 356.5 | 1915 | ||||||
CA_P0046 | TetR family HTH transcriptional regulator | 78 | 135 | ||||||
CA_P0047 | Sulphohydrolase/Glycosulfatase, Zn-dependent hydrolase | 107 | 70 | ||||||
CA_P0048 | Related to methyl-accepting chemotaxis protein | 1133.5 | 688.5 | ||||||
CA_P0049 | Permease, MDR related | 166 | 147 | ||||||
CA_P0050 | pnba Para-nitrobenzyl esterase, a/b hydrolase | 1928.5 | 1907 | ||||||
CA_P0052 | MarR family HTH transcriptional regulator | 473.5 | 317 | ||||||
CA_P0053 | xynb Xylanase, glycosyl hydrolase family 10 | 311.5 | 5611 | ||||||
CA_P0054 | Xylanase/chitin deacetylase family enzyme | 439 | 7819.5 | ||||||
CA_P0055 | hypothetical protein | 294.5 | 241 | ||||||
CA_P0056 | pell Pectate lyase, secreted, polysaccharide lyase family | 434 | 4597 | ||||||
CA_P0057 | Putative glycoportein or S-layer protein | 684.5 | 1091.5 | ||||||
CA_P0058 | Rare lipoprotein A RLPA releated protein | 11422 | 9077.5 | ||||||
CA_P0059 | Alcohol dehydrogenase | 1053 | 982 | ||||||
CA_P0062 | Hypothetical protein, CF-18 family | 138.5 | 69 | ||||||
CA_P0064 | alf Fructose-bisphosphate aldolase class I | 85.5 | 76 | ||||||
CA_P0065 | Predicted secreted metalloprotease | 310 | 4875 | ||||||
CA_P0066 | ptna Mannose-specific phosphotransferase system component IIAB | 104.5 | 15 | ||||||
CA_P0067 | manY/levF Mannose/fructose-specific phosphotransferase system component IIC | 204 | 52 | ||||||
CA_P0072 | hypothetical protein | 5976.5 | 2992.5 | ||||||
CA_P0073 | ABC ATPase containing transporter | 2071.5 | 725 | ||||||
CA_P0074 | hypothetical protein | 1774 | 546 | ||||||
CA_P0076 | penicillin binding protein 1A | 928 | 564.5 | ||||||
CA_P0077 | Uncharacterized Fe-S protein | 142.5 | 71.5 | ||||||
CA_P0079 | thlr ThlR, HTH transcriptional regulator TetR/AcrR family | 2049.5 | 1822.5 | ||||||
CA_P0080 | Site-Specific Recombinase, Xerd | 292.5 | 297.5 | ||||||
CA_P0081 | TnpR resolvase C-terminal fragment | 224 | 161.5 | ||||||
CA_P0082 | crp CRP (cyclic AMP receptor protein) regulatory protein | 722.5 | 711.5 | ||||||
CA_P0083 | SAM-dependent methyltransferase | 1307.5 | 605 | ||||||
CA_P0084 | hypothetical protein | 1124 | 831 | ||||||
CA_P0085 | Hypothetical secreted protein (fragment) | 631.5 | 489 | ||||||
CA_P0086 | Permease, MDR related, probably tetracycline resistance protein | 635.5 | 606.5 | ||||||
CA_P0087 | HTH transcriptional regulator TetR/AcrR family | 3898.5 | 2437.5 | ||||||
CA_P0088 | abf 3-oxoacyl-acyl-carrier protein synthase | 1694 | 1179.5 | ||||||
CA_P0089 | Predicted membrane protein | 158 | 86 | ||||||
CA_P0090 | ABC-type transporter, ATPase component | 330 | 239 | ||||||
CA_P0091 | Predicted regulator of stationary/sporulation gene expression | 1641.5 | 1946 | ||||||
CA_P0093 | tnpa TnpA, transposase (3' segment) | 427.5 | 420.5 | ||||||
CA_P0094 | TnpA, transposase (5' segment) | 589.5 | 522.5 | ||||||
CA_P0096 | ipyr Inorganic pyrophosphatase | 820.5 | 1010.5 | ||||||
CA_P0097 | lipg Carboxyl esterase, a/b hydrolase | 2128 | 2506 | ||||||
CA_P0098 | amyA alpha-amylase | 295.5 | 261.5 | ||||||
CA_P0099 | muts DNA mismatch repair protein, MUTS fragment | 234 | 182.5 | ||||||
CA_P0100 | HTH transcriptional regulator TetR/AcrR family | 638 | 838 | ||||||
CA_P0101 | hypothetical protein | 742 | 1077.5 | ||||||
CA_P0102 | Membrane protein | 891.5 | 8260.5 | ||||||
CA_P0103 | arsr Transcriptional regulator HTH-type, ArsR family | 426 | 516 | ||||||
CA_P0104 | arsb Heavy metal resistance membrane protein | 212 | 334 | ||||||
CA_P0105 | arsc Arsenate reductase, arsC, protein-tyrosine-phosphatase family enzyme | 259 | 556 | ||||||
CA_P0107 | HTH transcriptional regulator MerR family | 301.5 | 233.5 | ||||||
CA_P0108 | Predicted HTH containing transcriptional regulator | 861 | 780 | ||||||
CA_P0110 | NH2-acetyltransferase | 372.5 | 235 | ||||||
CA_P0111 | NH2-acetyltransferase | 167 | 37 | ||||||
CA_P0112 | hypothetical protein | 3320.5 | 12481.5 | ||||||
CA_P0113 | Solo B3/4 domain (OB-fold DNA/RNA-binding) of Phe-aaRS-beta | 3682 | 3518.5 | ||||||
CA_P0114 | Possible beta-xylosidase, family 43 of glycosyl hydrolases | 97 | 252.5 | ||||||
CA_P0115 | xynD Endo-1,4-beta-xylanase XynD B,subtilis ortholog (family 43 glycosyl hydrolase and cellulose-binding domain) | 3 | 99 | ||||||
CA_P0116 | Xylanase, glycosyl hydrolase family 10 | 253.5 | 1616 | ||||||
CA_P0117 | Possible beta-xylosidase diverged, family 5/39 of glycosyl hydrolases and alpha-amylase C (Greek key) C-terminal domain | 181.5 | 1570.5 | ||||||
CA_P0118 | Possible xylan degradation enzyme (glycosyl hydrolase family 30-like domain and Ricin B-like domain) | 194 | 1459 | ||||||
CA_P0119 | Possible xylan degradation enzyme (glycosyl hydrolase family 30-like domain and Ricin B-like domain) | 78 | 1033.5 | ||||||
CA_P0120 | Possible xylan degradation enzyme (glycosyl hydrolase family 43-like domain, cellulose-binding domain and Ricin B-like domain) | 96 | 1150.5 | ||||||
CA_P0121 | Leu-rich protein family protein, YaeG (E,coli) homolog | 23 | 67 | ||||||
CA_P0123 | hypothetical protein | 597.5 | 758.5 | ||||||
CA_P0124 | Permease, MDR related, probably tetracycline resistance protein | 1910 | 2061.5 | ||||||
CA_P0125 | hypothetical protein | 1040 | 703.5 | ||||||
CA_P0126 | Uncharacterized protein (NN,term domain homologous to B,subtilis (gi|833839) | 2070 | 1554 | ||||||
CA_P0127 | HTH transcriptional regulator TetR family | 393 | 205 |
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2. array (high scan) | pH 4.5 / Cy5 | ||||||||||
ORF | Name | (F 635 median - B635) - B635 SD | (F 532 median - B532) - B532 SD | pH 5.7 / Cy3 | |||||||
CA_P0001 | Oxidoreductase | 89 | 117 | ||||||||
CA_P0002 | Transglutaminase-like predicted protease domain fused ChW-repeats and cell-adhesion domain | 279 | 286 | ||||||||
CA_P0003 | Transglutaminase-like predicted protease domain fused to ChW-repeats and cell-adhesion domain | 155.5 | 237.5 | ||||||||
CA_P0004 | Cysteine protease | 16476 | 271 | ||||||||
CA_P0005 | Uncharacterized protein similar to Bacteriocin immunity protein of mesC/lccI/entI family | 162.5 | 229.5 | ||||||||
CA_P0006 | GntR family HTH transcriptional regulator | 1599 | 1544 | ||||||||
CA_P0007 | hypothetical protein | 957.5 | 1054 | ||||||||
CA_P0009 | Response regulator (CheY + HTH domains) | 3064 | 814.5 | ||||||||
CA_P0010 | bgla Beta_glucosidase | 2148.5 | 642.5 | ||||||||
CA_P0012 | pedb Pediocin immunity protein, PedB | 3817.5 | 2461.5 | ||||||||
CA_P0013 | FAD dependent dehydrogenase | 664 | 744.5 | ||||||||
CA_P0014 | Protein tyrosine phosphatase II superfamily protein | 1588 | 1583.5 | ||||||||
CA_P0015 | GLPQ related phosphodiesterase | 3664 | 3275 | ||||||||
CA_P0019 | grkc Spore germination protein, GRKC | 116 | 94 | ||||||||
CA_P0020 | grka Spore germination protein, GRKA | 201 | 85 | ||||||||
CA_P0021 | hypothetical protein | 19 | 32 | ||||||||
CA_P0023 | hypothetical protein | 44 | 49 | ||||||||
CA_P0024 | MarR family HTH transcriptional regulator | 106.5 | 118 | ||||||||
CA_P0025 | pdc Pyruvate decarboxylase | 5205.5 | 5797 | ||||||||
CA_P0026 | hypothetical protein | 5122 | 5912 | ||||||||
CA_P0027 | Predicted amino acid permeases | 206.5 | 114.5 | ||||||||
CA_P0028 | HTH transcriptional regulator TetR family | 468 | 431.5 | ||||||||
CA_P0031 | hlyU Transcriptional activator HLYU, HTH of ArsR family | 406.5 | 375 | ||||||||
CA_P0032 | Rhodanese-like domain | 228.5 | 167.5 | ||||||||
CA_P0033 | hypothetical protein | 399.5 | 297 | ||||||||
CA_P0034 | Rhodanese-like domain | 2499 | 1767.5 | ||||||||
CA_P0035 | adhe Aldehyde-alcohol dehydrogenase, ADHE1 | 814.5 | 2786.5 | ||||||||
CA_P0036 | Uncharacterized, ortholog of YgaT gene of B,subtillis | 3232.5 | 60284.5 | ||||||||
CA_P0037 | Uncharacterized, ortholog of YgaS gene of B,subtillis | 1103.5 | 61929.5 | ||||||||
CA_P0038 | Uncharacterized conserved protein, YCII family | 171.5 | 622 | ||||||||
CA_P0040 | Xre family DNA-binding domain and TPR repeats containing protein | 1605.5 | 255 | ||||||||
CA_P0044 | hypothetical protein | 1393 | 187 | ||||||||
CA_P0045 | Glycosyl transferase | 1757 | 261.5 | ||||||||
CA_P0046 | TetR family HTH transcriptional regulator | 157 | 7 | ||||||||
CA_P0047 | Sulphohydrolase/Glycosulfatase, Zn-dependent hydrolase | 107 | 76.5 | ||||||||
CA_P0048 | Related to methyl-accepting chemotaxis protein | 601 | 1031.5 | ||||||||
CA_P0049 | Permease, MDR related | 211.5 | 152.5 | ||||||||
CA_P0050 | pnba Para-nitrobenzyl esterase, a/b hydrolase | 2205 | 2468 | ||||||||
CA_P0051 | Oxidoreductase | 98.5 | 62.5 | ||||||||
CA_P0052 | MarR family HTH transcriptional regulator | 259.5 | 354 | ||||||||
CA_P0053 | xynb Xylanase, glycosyl hydrolase family 10 | 4608.5 | 241.5 | ||||||||
CA_P0054 | Xylanase/chitin deacetylase family enzyme | 6967 | 350 | ||||||||
CA_P0055 | hypothetical protein | 249 | 196 | ||||||||
CA_P0056 | pell Pectate lyase, secreted, polysaccharide lyase family | 4865 | 396 | ||||||||
CA_P0057 | Putative glycoportein or S-layer protein | 1320.5 | 688 | ||||||||
CA_P0058 | Rare lipoprotein A RLPA releated protein | 8917 | 10583 | ||||||||
CA_P0059 | Alcohol dehydrogenase | 837 | 775.5 | ||||||||
CA_P0062 | Hypothetical protein, CF-18 family | 151 | 123.5 | ||||||||
CA_P0064 | alf Fructose-bisphosphate aldolase class I | 124 | 32.5 | ||||||||
CA_P0065 | Predicted secreted metalloprotease | 4264.5 | 229.5 | ||||||||
CA_P0066 | ptna Mannose-specific phosphotransferase system component IIAB | 38 | 51 | ||||||||
CA_P0067 | manY/levF Mannose/fructose-specific phosphotransferase system component IIC | 69.5 | 159.5 | ||||||||
CA_P0072 | hypothetical protein | 2581 | 5461.5 | ||||||||
CA_P0073 | ABC ATPase containing transporter | 701 | 1729.5 | ||||||||
CA_P0074 | hypothetical protein | 599.5 | 1349 | ||||||||
CA_P0076 | penicillin binding protein 1A | 530.5 | 935.5 | ||||||||
CA_P0078 | thil Acetyl coenzyme A acetyltransferase (thiolase) | 259.5 | 283.5 | ||||||||
CA_P0079 | thlr ThlR, HTH transcriptional regulator TetR/AcrR family | 1417.5 | 1399.5 | ||||||||
CA_P0080 | Site-Specific Recombinase, Xerd | 300 | 254 | ||||||||
CA_P0081 | TnpR resolvase C-terminal fragment | 136 | 109 | ||||||||
CA_P0082 | crp CRP (cyclic AMP receptor protein) regulatory protein | 740.5 | 617.5 | ||||||||
CA_P0083 | SAM-dependent methyltransferase | 708.5 | 1280.5 | ||||||||
CA_P0084 | hypothetical protein | 887.5 | 1064 | ||||||||
CA_P0085 | Hypothetical secreted protein (fragment) | 474.5 | 507 | ||||||||
CA_P0086 | Permease, MDR related, probably tetracycline resistance protein | 605.5 | 584 | ||||||||
CA_P0087 | HTH transcriptional regulator TetR/AcrR family | 2460 | 3028.5 | ||||||||
CA_P0088 | abf 3-oxoacyl-acyl-carrier protein synthase | 1536.5 | 1659.5 | ||||||||
CA_P0089 | Predicted membrane protein | 134 | 123 | ||||||||
CA_P0090 | ABC-type transporter, ATPase component | 167.5 | 214.5 | ||||||||
CA_P0091 | Predicted regulator of stationary/sporulation gene expression | 2159 | 1306 | ||||||||
CA_P0093 | tnpa TnpA, transposase (3' segment) | 385.5 | 425.5 | ||||||||
CA_P0094 | TnpA, transposase (5' segment) | 464.5 | 407.5 | ||||||||
CA_P0096 | ipyr Inorganic pyrophosphatase | 959 | 746 | ||||||||
CA_P0097 | lipg Carboxyl esterase, a/b hydrolase | 2062.5 | 1594 | ||||||||
CA_P0098 | amyA alpha-amylase | 297 | 309 | ||||||||
CA_P0099 | muts DNA mismatch repair protein, MUTS fragment | 211 | 148 | ||||||||
CA_P0100 | HTH transcriptional regulator TetR/AcrR family | 942 | 583 | ||||||||
CA_P0101 | hypothetical protein | 1041.5 | 599.5 | ||||||||
CA_P0102 | Membrane protein | 8135.5 | 733 | ||||||||
CA_P0103 | arsr Transcriptional regulator HTH-type, ArsR family | 587 | 263.5 | ||||||||
CA_P0104 | arsb Heavy metal resistance membrane protein | 468.5 | 269 | ||||||||
CA_P0105 | arsc Arsenate reductase, arsC, protein-tyrosine-phosphatase family enzyme | 463 | 214 | ||||||||
CA_P0106 | dxs 1-deoxyxylulose-5-phosphate synthase, dehydrogenase | 107 | 109 | ||||||||
CA_P0108 | Predicted HTH containing transcriptional regulator | 782.5 | 600 | ||||||||
CA_P0110 | NH2-acetyltransferase | 226 | 274 | ||||||||
CA_P0111 | NH2-acetyltransferase | 52 | 152 | ||||||||
CA_P0112 | hypothetical protein | 11961.5 | 2907 | ||||||||
CA_P0113 | Solo B3/4 domain (OB-fold DNA/RNA-binding) of Phe-aaRS-beta | 3998.5 | 2880.5 | ||||||||
CA_P0114 | Possible beta-xylosidase, family 43 of glycosyl hydrolases | 293.5 | 65 | ||||||||
CA_P0116 | Xylanase, glycosyl hydrolase family 10 | 2110.5 | 306 | ||||||||
CA_P0117 | Possible beta-xylosidase diverged, family 5/39 of glycosyl hydrolases and alpha-amylase C (Greek key) C-terminal domain | 1687 | 154 | ||||||||
CA_P0118 | Possible xylan degradation enzyme (glycosyl hydrolase family 30-like domain and Ricin B-like domain) | 1520 | 203 | ||||||||
CA_P0119 | Possible xylan degradation enzyme (glycosyl hydrolase family 30-like domain and Ricin B-like domain) | 797.5 | 16 | ||||||||
CA_P0120 | Possible xylan degradation enzyme (glycosyl hydrolase family 43-like domain, cellulose-binding domain and Ricin B-like domain) | 1005 | 35 | ||||||||
CA_P0122 | dTDP-4-keto-L-rhamnose reductase | 11 | 20 | ||||||||
CA_P0123 | hypothetical protein | 833 | 555.5 | ||||||||
CA_P0124 | Permease, MDR related, probably tetracycline resistance protein | 2063.5 | 1624 | ||||||||
CA_P0125 | hypothetical protein | 693.5 | 846.5 |
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3. array (low scan) | pH 4.5 / Cy3 | ||||||||
ORF | Name | (F 635 median - B635) - B635 SD | (F 532 median - B532) - B532 SD | pH 5.7 / Cy5 | |||||
CA_P0002 | Transglutaminase-like predicted protease domain fused ChW-repeats and cell-adhesion domain | 106.5 | 14.5 | ||||||
CA_P0003 | Transglutaminase-like predicted protease domain fused to ChW-repeats and cell-adhesion domain | 64 | 10 | ||||||
CA_P0004 | Cysteine protease | 167.5 | 4352 | ||||||
CA_P0005 | Uncharacterized protein similar to Bacteriocin immunity protein of mesC/lccI/entI family | 50 | 62.5 | ||||||
CA_P0006 | GntR family HTH transcriptional regulator | 326.5 | 314 | ||||||
CA_P0007 | hypothetical protein | 523.5 | 311 | ||||||
CA_P0009 | Response regulator (CheY + HTH domains) | 197 | 376 | ||||||
CA_P0010 | bgla Beta_glucosidase | 181 | 522.5 | ||||||
CA_P0012 | pedb Pediocin immunity protein, PedB | 1352.5 | 1527.5 | ||||||
CA_P0013 | FAD dependent dehydrogenase | 232.5 | 107.5 | ||||||
CA_P0014 | Protein tyrosine phosphatase II superfamily protein | 534 | 238.5 | ||||||
CA_P0015 | GLPQ related phosphodiesterase | 725.5 | 1011.5 | ||||||
CA_P0018 | hypothetical protein | 9 | 7 | ||||||
CA_P0019 | grkc Spore germination protein, GRKC | 22.5 | 27.5 | ||||||
CA_P0020 | grka Spore germination protein, GRKA | 52 | 85.5 | ||||||
CA_P0025 | pdc Pyruvate decarboxylase | 1341 | 601.5 | ||||||
CA_P0026 | hypothetical protein | 1107 | 650 | ||||||
CA_P0027 | Predicted amino acid permeases | 20.5 | 54 | ||||||
CA_P0028 | HTH transcriptional regulator TetR family | 130 | 41 | ||||||
CA_P0031 | hlyU Transcriptional activator HLYU, HTH of ArsR family | 107 | 77.5 | ||||||
CA_P0032 | Rhodanese-like domain | 42.5 | 10.5 | ||||||
CA_P0033 | hypothetical protein | 105 | 71 | ||||||
CA_P0034 | Rhodanese-like domain | 519 | 591 | ||||||
CA_P0035 | adhe Aldehyde-alcohol dehydrogenase, ADHE1 | 324 | 81 | ||||||
CA_P0036 | Uncharacterized, ortholog of YgaT gene of B.subtillis | 36982.5 | 101.5 | ||||||
CA_P0037 | Uncharacterized, ortholog of YgaS gene of B.subtillis | 27184.5 | 32 | ||||||
CA_P0038 | Uncharacterized conserved protein, YCII family | 153.5 | 22 | ||||||
CA_P0044 | hypothetical protein | 76.5 | 268.5 | ||||||
CA_P0045 | Glycosyl transferase | 84 | 377 | ||||||
CA_P0046 | TetR family HTH transcriptional regulator | 10 | 25 | ||||||
CA_P0047 | Sulphohydrolase/Glycosulfatase, Zn-dependent hydrolase | 31 | 19 | ||||||
CA_P0048 | Related to methyl-accepting chemotaxis protein | 248 | 125.5 | ||||||
CA_P0049 | Permease, MDR related | 33.5 | 69.5 | ||||||
CA_P0050 | pnba Para-nitrobenzyl esterase, a/b hydrolase | 471 | 327.5 | ||||||
CA_P0051 | Oxidoreductase | 37 | 32.5 | ||||||
CA_P0052 | MarR family HTH transcriptional regulator | 28 | 42 | ||||||
CA_P0053 | xynb Xylanase, glycosyl hydrolase family 10 | 102.5 | 2182 | ||||||
CA_P0054 | Xylanase/chitin deacetylase family enzyme | 150 | 2618.5 | ||||||
CA_P0055 | hypothetical protein | 102 | 218.5 | ||||||
CA_P0056 | pell Pectate lyase, secreted, polysaccharide lyase family | 140 | 904 | ||||||
CA_P0057 | Putative glycoportein or S-layer protein | 554.5 | 373.5 | ||||||
CA_P0058 | Rare lipoprotein A RLPA releated protein | 2633.5 | 1793.5 | ||||||
CA_P0059 | Alcohol dehydrogenase | 181.5 | 176 | ||||||
CA_P0061 | hypothetical protein | 18 | 11 | ||||||
CA_P0062 | Hypothetical protein, CF-18 family | 42 | 7.5 | ||||||
CA_P0065 | Predicted secreted metalloprotease | 112.5 | 1834.5 | ||||||
CA_P0066 | ptna Mannose-specific phosphotransferase system component IIAB | 46 | 6 | ||||||
CA_P0067 | manY/levF Mannose/fructose-specific phosphotransferase system component IIC | 40.5 | 7 | ||||||
CA_P0070 | HAD phosphatase superfamily protein | 5 | 16 | ||||||
CA_P0072 | hypothetical protein | 2495 | 384.5 | ||||||
CA_P0073 | ABC ATPase containing transporter | 1289.5 | 145 | ||||||
CA_P0074 | hypothetical protein | 1090.5 | 105.5 | ||||||
CA_P0076 | penicillin binding protein 1A | 320 | 106 | ||||||
CA_P0077 | Uncharacterized Fe-S protein | 4 | 2 | ||||||
CA_P0078 | thil Acetyl coenzyme A acetyltransferase (thiolase) | 66.5 | 29.5 | ||||||
CA_P0079 | thlr ThlR, HTH transcriptional regulator TetR/AcrR family | 267 | 76.5 | ||||||
CA_P0080 | Site-Specific Recombinase, Xerd | 67 | 52.5 | ||||||
CA_P0082 | crp CRP (cyclic AMP receptor protein) regulatory protein | 122.5 | 188 | ||||||
CA_P0083 | SAM-dependent methyltransferase | 365 | 90.5 | ||||||
CA_P0084 | hypothetical protein | 260 | 168.5 | ||||||
CA_P0085 | Hypothetical secreted protein (fragment) | 138.5 | 105 | ||||||
CA_P0086 | Permease, MDR related, probably tetracycline resistance protein | 296.5 | 203.5 | ||||||
CA_P0087 | HTH transcriptional regulator TetR/AcrR family | 853.5 | 930 | ||||||
CA_P0088 | abf 3-oxoacyl-acyl-carrier protein synthase | 941.5 | 1379.5 | ||||||
CA_P0089 | Predicted membrane protein | 36.5 | 80.5 | ||||||
CA_P0090 | ABC-type transporter, ATPase component | 66 | 128.5 | ||||||
CA_P0091 | Predicted regulator of stationary/sporulation gene expression | 257.5 | 291.5 | ||||||
CA_P0093 | tnpa TnpA, transposase (3' segment) | 98.5 | 66.5 | ||||||
CA_P0094 | TnpA, transposase (5' segment) | 104.5 | 29 | ||||||
CA_P0096 | ipyr Inorganic pyrophosphatase | 204 | 129 | ||||||
CA_P0097 | lipg Carboxyl esterase, a/b hydrolase | 671.5 | 391 | ||||||
CA_P0098 | amyA alpha-amylase | 81 | 36.5 | ||||||
CA_P0099 | muts DNA mismatch repair protein, MUTS fragment | 11 | 11 | ||||||
CA_P0100 | HTH transcriptional regulator TetR/AcrR family | 85 | 189.5 | ||||||
CA_P0101 | hypothetical protein | 58.5 | 158.5 | ||||||
CA_P0102 | Membrane protein | 197.5 | 1702 | ||||||
CA_P0103 | arsr Transcriptional regulator HTH-type, ArsR family | 68.5 | 77.5 | ||||||
CA_P0104 | arsb Heavy metal resistance membrane protein | 72.5 | 117.5 | ||||||
CA_P0105 | arsc Arsenate reductase, arsC, protein-tyrosine-phosphatase family enzyme | 81 | 195 | ||||||
CA_P0106 | dxs 1-deoxyxylulose-5-phosphate synthase, dehydrogenase | 27 | 15 | ||||||
CA_P0107 | HTH transcriptional regulator MerR family | 50 | 36.5 | ||||||
CA_P0108 | Predicted HTH containing transcriptional regulator | 111 | 105.5 | ||||||
CA_P0110 | NH2-acetyltransferase | 52.5 | 66.5 | ||||||
CA_P0111 | NH2-acetyltransferase | 15 | 23.5 | ||||||
CA_P0112 | hypothetical protein | 838.5 | 4584.5 | ||||||
CA_P0113 | Solo B3/4 domain (OB-fold DNA/RNA-binding) of Phe-aaRS-beta | 990.5 | 461.5 | ||||||
CA_P0114 | Possible beta-xylosidase, family 43 of glycosyl hydrolases | 36 | 37.5 | ||||||
CA_P0116 | Xylanase, glycosyl hydrolase family 10 | 59 | 217 | ||||||
CA_P0117 | Possible beta-xylosidase diverged, family 5/39 of glycosyl hydrolases and alpha-amylase C (Greek key) C-terminal domain | 55 | 251.5 | ||||||
CA_P0118 | Possible xylan degradation enzyme (glycosyl hydrolase family 30-like domain and Ricin B-like domain) | 38 | 244 | ||||||
CA_P0119 | Possible xylan degradation enzyme (glycosyl hydrolase family 30-like domain and Ricin B-like domain) | 24.5 | 189.5 | ||||||
CA_P0120 | Possible xylan degradation enzyme (glycosyl hydrolase family 43-like domain, cellulose-binding domain and Ricin B-like domain) | 28 | 211.5 | ||||||
CA_P0121 | Leu-rich protein family protein, YaeG (E.coli) homolog | 1 | 7 | ||||||
CA_P0123 | hypothetical protein | 127.5 | 96 | ||||||
CA_P0124 | Permease, MDR related, probably tetracycline resistance protein | 507 | 909.5 | ||||||
CA_P0125 | hypothetical protein | 223 | 119 | ||||||
CA_P0126 | Uncharacterized protein (NN.term domain homologous to B.subtilis (gi|833839) | 271 | 159 | ||||||
CA_P0127 | HTH transcriptional regulator TetR family | 62 | 29 |
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4. array (low scan) | pH 4.5 / Cy5 | ||||||||
ORF | Name | (F 635 median - B635) - B635 SD | (F 532 median - B532) - B532 SD | pH 5.7 / Cy3 | |||||
CA_P0002 | Transglutaminase-like predicted protease domain fused ChW-repeats and cell-adhesion domain | 16.5 | 45 | ||||||
CA_P0003 | Transglutaminase-like predicted protease domain fused to ChW-repeats and cell-adhesion domain | 8.5 | 28.5 | ||||||
CA_P0004 | Cysteine protease | 3907 | 131.5 | ||||||
CA_P0005 | Uncharacterized protein similar to Bacteriocin immunity protein of mesC/lccI/entI family | 102 | 33 | ||||||
CA_P0006 | GntR family HTH transcriptional regulator | 269.5 | 312 | ||||||
CA_P0007 | hypothetical protein | 159.5 | 180 | ||||||
CA_P0009 | Response regulator (CheY + HTH domains) | 596 | 133.5 | ||||||
CA_P0010 | bgla Beta_glucosidase | 508.5 | 160 | ||||||
CA_P0012 | pedb Pediocin immunity protein, PedB | 2200 | 842 | ||||||
CA_P0013 | FAD dependent dehydrogenase | 190.5 | 138 | ||||||
CA_P0014 | Protein tyrosine phosphatase II superfamily protein | 389.5 | 371.5 | ||||||
CA_P0015 | GLPQ related phosphodiesterase | 1249.5 | 475.5 | ||||||
CA_P0017 | grkb1 Spore germination protein, GRKB | 10 | 3 | ||||||
CA_P0019 | grkc Spore germination protein, GRKC | 43.5 | 12 | ||||||
CA_P0020 | grka Spore germination protein, GRKA | 88 | 31.5 | ||||||
CA_P0021 | hypothetical protein | 13 | 7 | ||||||
CA_P0023 | hypothetical protein | 3 | 12 | ||||||
CA_P0025 | pdc Pyruvate decarboxylase | 788.5 | 1078.5 | ||||||
CA_P0026 | hypothetical protein | 602 | 485 | ||||||
CA_P0027 | Predicted amino acid permeases | 61 | 28.5 | ||||||
CA_P0028 | HTH transcriptional regulator TetR family | 83 | 92 | ||||||
CA_P0031 | hlyU Transcriptional activator HLYU, HTH of ArsR family | 80.5 | 69 | ||||||
CA_P0032 | Rhodanese-like domain | 21 | 17 | ||||||
CA_P0033 | hypothetical protein | 87.5 | 59 | ||||||
CA_P0034 | Rhodanese-like domain | 636 | 396.5 | ||||||
CA_P0035 | adhe Aldehyde-alcohol dehydrogenase, ADHE1 | 87 | 243 | ||||||
CA_P0036 | Uncharacterized, ortholog of YgaT gene of B.subtillis | 258 | 54827.5 | ||||||
CA_P0037 | Uncharacterized, ortholog of YgaS gene of B.subtillis | 76 | 28223 | ||||||
CA_P0038 | Uncharacterized conserved protein, YCII family | 30.5 | 108.5 | ||||||
CA_P0040 | Xre family DNA-binding domain and TPR repeats containing protein | 233 | 48 | ||||||
CA_P0044 | hypothetical protein | 290 | 37.5 | ||||||
CA_P0045 | Glycosyl transferase | 329 | 25 | ||||||
CA_P0046 | TetR family HTH transcriptional regulator | 12 | 7 | ||||||
CA_P0047 | Sulphohydrolase/Glycosulfatase, Zn-dependent hydrolase | 29 | 18 | ||||||
CA_P0048 | Related to methyl-accepting chemotaxis protein | 124.5 | 173.5 | ||||||
CA_P0049 | Permease, MDR related | 120.5 | 25.5 | ||||||
CA_P0050 | pnba Para-nitrobenzyl esterase, a/b hydrolase | 338 | 427.5 | ||||||
CA_P0051 | Oxidoreductase | 38.5 | 21.5 | ||||||
CA_P0052 | MarR family HTH transcriptional regulator | 58 | 24 | ||||||
CA_P0053 | xynb Xylanase, glycosyl hydrolase family 10 | 1977.5 | 82.5 | ||||||
CA_P0054 | Xylanase/chitin deacetylase family enzyme | 3082.5 | 98 | ||||||
CA_P0055 | hypothetical protein | 221.5 | 75.5 | ||||||
CA_P0056 | pell Pectate lyase, secreted, polysaccharide lyase family | 1006 | 88.5 | ||||||
CA_P0057 | Putative glycoportein or S-layer protein | 455 | 399.5 | ||||||
CA_P0058 | Rare lipoprotein A RLPA releated protein | 1842 | 2759.5 | ||||||
CA_P0059 | Alcohol dehydrogenase | 146 | 155.5 | ||||||
CA_P0061 | hypothetical protein | 1 | 10 | ||||||
CA_P0062 | Hypothetical protein, CF-18 family | 12.5 | 22 | ||||||
CA_P0064 | alf Fructose-bisphosphate aldolase class I | 6.5 | 7 | ||||||
CA_P0065 | Predicted secreted metalloprotease | 1836 | 93 | ||||||
CA_P0066 | ptna Mannose-specific phosphotransferase system component IIAB | 2 | 21 | ||||||
CA_P0067 | manY/levF Mannose/fructose-specific phosphotransferase system component IIC | 3 | 30 | ||||||
CA_P0072 | hypothetical protein | 584 | 1204 | ||||||
CA_P0073 | ABC ATPase containing transporter | 153.5 | 339.5 | ||||||
CA_P0074 | hypothetical protein | 154.5 | 348.5 | ||||||
CA_P0076 | penicillin binding protein 1A | 119.5 | 179.5 | ||||||
CA_P0077 | Uncharacterized Fe-S protein | 3.5 | 8.5 | ||||||
CA_P0078 | thil Acetyl coenzyme A acetyltransferase (thiolase) | 31 | 76.5 | ||||||
CA_P0079 | thlr ThlR, HTH transcriptional regulator TetR/AcrR family | 122.5 | 172.5 | ||||||
CA_P0080 | Site-Specific Recombinase, Xerd | 51 | 42 | ||||||
CA_P0081 | TnpR resolvase C-terminal fragment | 22 | 24 | ||||||
CA_P0082 | crp CRP (cyclic AMP receptor protein) regulatory protein | 249 | 92 | ||||||
CA_P0083 | SAM-dependent methyltransferase | 117.5 | 286 | ||||||
CA_P0084 | hypothetical protein | 210 | 219.5 | ||||||
CA_P0085 | Hypothetical secreted protein (fragment) | 120.5 | 101.5 | ||||||
CA_P0086 | Permease, MDR related, probably tetracycline resistance protein | 223 | 257 | ||||||
CA_P0087 | HTH transcriptional regulator TetR/AcrR family | 1078.5 | 746.5 | ||||||
CA_P0088 | abf 3-oxoacyl-acyl-carrier protein synthase | 1604 | 935.5 | ||||||
CA_P0089 | Predicted membrane protein | 110 | 40 | ||||||
CA_P0090 | ABC-type transporter, ATPase component | 133 | 72 | ||||||
CA_P0091 | Predicted regulator of stationary/sporulation gene expression | 554 | 199 | ||||||
CA_P0093 | tnpa TnpA, transposase (3' segment) | 54 | 75 | ||||||
CA_P0094 | TnpA, transposase (5' segment) | 27 | 56 | ||||||
CA_P0096 | ipyr Inorganic pyrophosphatase | 155 | 138.5 | ||||||
CA_P0097 | lipg Carboxyl esterase, a/b hydrolase | 462.5 | 400 | ||||||
CA_P0098 | amyA alpha-amylase | 47 | 48.5 | ||||||
CA_P0099 | muts DNA mismatch repair protein, MUTS fragment | 24.5 | 4 | ||||||
CA_P0100 | HTH transcriptional regulator TetR/AcrR family | 163.5 | 75 | ||||||
CA_P0101 | hypothetical protein | 205 | 73.5 | ||||||
CA_P0102 | Membrane protein | 1998 | 154 | ||||||
CA_P0103 | arsr Transcriptional regulator HTH-type, ArsR family | 141 | 36 | ||||||
CA_P0104 | arsb Heavy metal resistance membrane protein | 141 | 44 | ||||||
CA_P0105 | arsc Arsenate reductase, arsC, protein-tyrosine-phosphatase family enzyme | 141 | 54 | ||||||
CA_P0106 | dxs 1-deoxyxylulose-5-phosphate synthase, dehydrogenase | 18.5 | 28 | ||||||
CA_P0107 | HTH transcriptional regulator MerR family | 51.5 | 38 | ||||||
CA_P0108 | Predicted HTH containing transcriptional regulator | 114.5 | 76 | ||||||
CA_P0110 | NH2-acetyltransferase | 56 | 42 | ||||||
CA_P0112 | hypothetical protein | 4686.5 | 784.5 | ||||||
CA_P0113 | Solo B3/4 domain (OB-fold DNA/RNA-binding) of Phe-aaRS-beta | 658 | 591.5 | ||||||
CA_P0114 | Possible beta-xylosidase, family 43 of glycosyl hydrolases | 19 | 16 | ||||||
CA_P0115 | xynD Endo-1,4-beta-xylanase XynD B.subtilis ortholog (family 43 glycosyl hydrolase and cellulose-binding domain) | 9 | 4 | ||||||
CA_P0116 | Xylanase, glycosyl hydrolase family 10 | 224.5 | 53 | ||||||
CA_P0117 | Possible beta-xylosidase diverged, family 5/39 of glycosyl hydrolases and alpha-amylase C (Greek key) C-terminal domain | 339.5 | 45 | ||||||
CA_P0118 | Possible xylan degradation enzyme (glycosyl hydrolase family 30-like domain and Ricin B-like domain) | 262.5 | 27.5 | ||||||
CA_P0119 | Possible xylan degradation enzyme (glycosyl hydrolase family 30-like domain and Ricin B-like domain) | 224 | 17 | ||||||
CA_P0120 | Possible xylan degradation enzyme (glycosyl hydrolase family 43-like domain, cellulose-binding domain and Ricin B-like domain) | 199.5 | 15 | ||||||
CA_P0123 | hypothetical protein | 102 | 79.5 | ||||||
CA_P0124 | Permease, MDR related, probably tetracycline resistance protein | 1062.5 | 421 |