Selected Cell
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Value:
Read me_data
Transcriptome_data
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1. Array
2. Array
3. Array
4. Array
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Description: | This data-sheet reflects the transcriptome of C. acetobutylicum concerning the comparison of acidogenesis to solventogenesis. Genes with average fold regulation > 1.0 (significant > 3.0) showed elevated transcript level in the acidogenesis (pH 5.7) or repressed transcript level in the solventogenesis (pH 4.5), respectively. Genes were figured out as significant induced, if the average fold regulation was > 3.0 and at least three out of four micro arrays were > 2.0.Furthermore, genes with fold regulation < 1.0 (significant < 0.33) showed elevated transcript level in the solventogenesis (pH 4.5) or repressed transcript level in the acidogenesis (pH 5.7), respectively. Genes were figured out as significant induced, if the average fold regulation was < 0.33 and at least three out of four micro arrays were < 0.5. | ||||||||
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CAC3306 | Thiol peroxidase, TPX | 0.617 | 0.5006257822277848 | 0.9584999999999999 | 0.5302226935312832 | 0.651587118939767 | 0.2104839141073462 | ||
CAC3314 | Nitroreductase family protein | 0.839 | 0.8186655751125665 | 2.1585 | 1.9436345966958213 | 1.439950042952097 | 0.7111370038082988 | ||
CAC3315 | htpG heat shock protein 90 | 1.294 | 1.0330578512396695 | 5.6565 | 2.442002442002442 | 2.606390073310528 | 2.1235140564441117 | ||
CAC3318 | hypothetical protein | 1.756 | 2.4096385542168677 | 1.016 | 1.7272128514056224 | 0.697265107325088 | |||
CAC3319 | Signal transduction histidine kinase | 0.9715 | 1.0565240359218173 | 2.678 | 1.5026296018031555 | 1.5521634094312433 | 0.7858731895979889 | ||
CAC3320 | Predicted secreted protein homolog of yjcM/yhbB B,subtilis | 0.858 | 0.9718172983479106 | 1.1425 | 1.1855364552459988 | 1.0394634383984773 | 0.15216092250940522 | ||
CAC3321 | hypothetical protein | 0.9725 | 0.9803921568627451 | 1.2345000000000002 | 1.0775862068965516 | 1.0662445909398242 | 0.12192511868349278 | ||
CAC3322 | Predicted acetyltransferase | 0.8275 | 0.8375209380234506 | 0.631 | 0.7393715341959335 | 0.758848118054846 | 0.09596348629453287 | ||
CAC3324 | Predicted transcriptional regulator | 1.4475 | 1.36986301369863 | 1.0285 | 1.1098779134295227 | 1.2389352317820381 | 0.20131246427292554 | ||
CAC3328 | Predicted membrane protein | 0.835 | 1.0666666666666667 | 0.5415000000000001 | 0.5793742757821553 | 0.7556352356122055 | 0.24492253334542444 | ||
CAC3329 | Putative Mn transporter, NRAMP family | 1.063 | 1.0438413361169103 | 0.394 | 0.39292730844793716 | 0.723442161141212 | 0.3811068803034163 | ||
CAC3333 | Uncharacterized conserved protein, related to pyruvate formate-lyase activating enzyme | 0.775 | 0.9165902841429882 | 0.7285 | 1.4981273408239701 | 0.9795544062417396 | 0.354848882934316 | ||
CAC3334 | Multimeric flavodoxin WrbA family protein | 0.8585 | 0.9306654257794322 | 1.0285 | 0.9132420091324202 | 0.932726858727963 | 0.0708661414576755 | ||
CAC3335 | Short-chain alcohol dehydrogenase family enzyme | 1.2185000000000001 | 1.1600928074245938 | 1.673 | 1.5885623510722797 | 1.4100387896242186 | 0.25831464154066036 | ||
CAC3336 | Predicted cAMP-binding domain, regulatory protein, diverged | 0.972 | 1.3071895424836601 | 1.4775 | 1.5037593984962405 | 1.3151122352449751 | 0.2447763015355565 | ||
CAC3338 | Predicted transcriptional regulator | 1.0539999999999998 | 0.9930486593843098 | 0.8939999999999999 | 0.8984725965858041 | 0.9598803139925284 | 0.07760965996367447 | ||
CAC3339 | ATPase component of ABC transporter (two ATPase domains) | 1.673 | 1.4749262536873156 | 2.378 | 1.947419668938656 | 1.868336480656493 | 0.3911261522738695 | ||
CAC3340 | Uncharacterized conserved domain seen in the bacterial SpoT | 1.373 | 1.4398848092152627 | 2.9770000000000003 | 1.902949571836346 | 1.923208595262902 | 0.7409944069038997 | ||
CAC3341 | Multimeric flavodoxin WrbA family protein | 1.0455 | 1.021972406745018 | 0.901 | 0.7722007722007722 | 0.9351682947364477 | 0.12574302474302085 | ||
CAC3342 | Dehydrogenase related to 3-hydroxyisobutyrate dehydrogenase, YKWC B,subtilis ortholog | 1.0230000000000001 | 1.0330578512396695 | 0.668 | 0.8481764206955048 | 0.8930585679837937 | 0.17238555743323797 | ||
CAC3343 | Biotin synthase related domain containing protein | 1.1535000000000002 | 1.1031439602868174 | 0.4025 | 0.35593521978999826 | 0.7537697950192039 | 0.433401031482801 | ||
CAC3344 | Uncharacterized protein, homolog of hypothetical protein (GI 5918205) from Pseudomonas stutzeri | 1.1375 | 1.2919896640826873 | 0.585 | 0.5091649694501018 | 0.8809136583831972 | 0.3918256474961557 | ||
CAC3345 | Transcriptional regulator, AcrR family | 1.2725 | 1.238390092879257 | 0.582 | 0.708215297450425 | 0.9502763475824205 | 0.3563980137364907 | ||
CAC3347 | Amino acid transporter, permease | 1.596 | 1.2422360248447204 | 0.601 | 0.5678591709256104 | 1.0017737989425828 | 0.5032654708451323 | ||
CAC3348 | mmuM homocysteine methyltransferase | 1.6075 | 1.6750418760469012 | 1.0945 | 0.996512207274539 | 1.34338852083036 | 0.3473794727013312 | ||
CAC3349 | Transcriptional regulator, LysR family | 0.8345 | 0.6535947712418301 | 1.123 | 0.8853474988933157 | 0.8741105675337864 | 0.1934497623797605 | ||
CAC3352 | Membrane associated methyl-accepting chemotaxis protein with HAMP domain | 0.8240000000000001 | 0.6359300476947536 | 0.987 | 0.4310344827586207 | 0.7194911326133435 | 0.23991164432704257 | ||
CAC3355 | Polyketide synthase pksE (short-chain alcohol dehydrogenase,acyl-carrier-protein S-malonyltransferase,3-oxoacyl-(acyl-carrier-protein) synthase I domains) | 1.0670000000000002 | 1.2040939193257074 | 1.32 | 1.3831258644536653 | 1.2435549459448434 | 0.13910752333154963 | ||
CAC3356 | Lactoylglutathione lyase (LGUL) family protein, diverged | 1.53 | 1.2911555842479019 | 1.36 | 1.5278838808250574 | 1.4272598662682399 | 0.12073247640885498 | ||
CAC3357 | hypothetical protein | 1.2795 | 1.2445550715619165 | 1.4755 | 1.8399264029438822 | 1.4598703686264496 | 0.27299635017486823 | ||
CAC3359 | Nitroreductase family protein fused to ferredoxin domain | 1.379 | 1.17096018735363 | 2.255 | 1.594896331738437 | 1.5999641297730167 | 0.4697400710742995 | ||
CAC3360 | Transcriptional regulator, LysR family | 1.0895000000000001 | 0.9624639076034649 | 1.093 | 0.7710100231303006 | 0.9789934826834414 | 0.15137098209377636 | ||
CAC3362 | Uncharacterized conserved membrane protein, YOAK B,subtilis homolog | 0.5585 | 0.6144393241167435 | 0.309 | 0.2807017543859649 | 0.4406602696256771 | 0.17030023980224013 | ||
CAC3365 | hypothetical protein | 0.7444999999999999 | 1.3253810470510272 | 1.3635000000000002 | 1.7286084701815039 | 1.2904973793081327 | 0.40685817310240635 | ||
CAC3366 | hypothetical protein | 1.5055 | 1.33422281521014 | 1.7050298380221653 | 1.514917551077435 | 0.18558281101142168 | |||
CAC3367 | Protein distantly similar to N-terminal fragment of HSP60 chaperonin family | 1.2325 | 1.0214504596527068 | 1.057 | 0.8250825082508251 | 1.034008241975883 | 0.16706810891566884 | ||
CAC3371 | 2-enoate reductase (Two distinct NAD(FAD)-dependent dehydrogenase domains) | 0.5605 | 0.5506607929515418 | 0.8065 | 1.2055455093429777 | 0.7808015755736298 | 0.3069013860715899 | ||
CAC3373 | Pectin methylesterase | 1.1360000000000001 | 1.1716461628588168 | 1.3105 | 1.2026458208057729 | 1.2051979959161476 | 0.07529744086440407 | ||
CAC3374 | Predicted acetyltransferase | 1.42 | 1.0116337885685383 | 1.9545 | 0.7671653241273494 | 1.2883247781739717 | 0.5193883808509455 | ||
CAC3376 | Possible pectin degradation protein (sugar phosphate isomerase family) | 0.749 | 0.7087172218284904 | 0.9355 | 0.783085356303837 | 0.7940756445330819 | 0.09906144357801933 | ||
CAC3377 | Xylanase/chitin deacetylase family enzyme | 0.625 | 0.5982650314089142 | 0.41800000000000004 | 0.3239915762190183 | 0.49131415190698313 | 0.14454780732947906 | ||
CAC3378 | Aldo/keto reductase family enzyme | 0.7325 | 0.7102272727272728 | 0.751 | 0.40024014408645187 | 0.6484918542034311 | 0.16633847218963596 | ||
CAC3379 | Uncharacterized protein, YQFW B,subtilis homolog | 3.5785 | 3.466204506065858 | 5.5575 | 6.349206349206349 | 4.737852713818052 | 1.4410031333925153 | ||
CAC3383 | hypothetical protein | 1.2325 | 1.2360939431396787 | 1.2585 | 0.9021199819576003 | 1.1573034812743197 | 0.17051080809843244 | ||
CAC3384 | Protein chain release factor B | 1.1455 | 0.9174311926605504 | 1.3010000000000002 | 0.628930817610063 | 0.9982155025676533 | 0.2922718245860934 | ||
CAC3385 | hypothetical protein | 0.997 | 1.0121457489878543 | 0.742 | 0.5730659025787965 | 0.8310529128916626 | 0.2119911710345234 | ||
CAC3387 | Pectate lyase | 0.161 | 0.17115960633290542 | 0.057999999999999996 | 0.06646063868673778 | 0.1141550612549108 | 0.06019998697185494 | ||
CAC3389 | Possible S-layer protein | 1.127 | 1.4367816091954024 | 0.8116883116883117 | 1.1251566402945714 | 0.31255072568836695 | |||
CAC3390 | Response regulator (CheY-like receiver domain containing) | 1.583 | 1.3046314416177431 | 1.619 | 1.321003963011889 | 1.456908851157408 | 0.16716365875743086 | ||
CAC3391 | Membrane associated signal transduction histidine kinase | 1.2894999999999999 | 1.0395010395010396 | 2.0195 | 1.12549240292628 | 1.36849836060683 | 0.44621930640817886 | ||
CAC3392 | NADH-dependent butanol dehydrogenase | 1.1655 | 0.9345794392523364 | 2.1835 | 1.1299435028248588 | 1.3533807355192988 | 0.562647280496491 | ||
CAC3394 | Uncharacterized conserved protein, YGIN family | 1.353 | 1.07469102632993 | 1.9375 | 1.1655011655011656 | 1.3826730479577738 | 0.38761234442988335 | ||
CAC3395 | Predicted membrane protein | 1.21 | 1.2330456226880395 | 1.1875 | 0.8771929824561403 | 1.126934651286045 | 0.16752955264035693 | ||
CAC3396 | Nudix (MutT) family hydrolase, C4-type Zn-finger domain containing | 1.2814999999999999 | 1.1500862564692353 | 1.3205 | 0.9685230024213075 | 1.1801523147226358 | 0.15880780811809592 | ||
CAC3398 | Uncharacterized conserved protein, YbhB family | 1.4169999999999998 | 1.1621150493898895 | 1.668 | 1.1160714285714286 | 1.3407966194903296 | 0.25514539798916697 | ||
CAC3399 | Predicted transcriptional regulator | 1.658 | 1.3245033112582782 | 1.5365 | 1.5885623510722797 | 1.5268914155826394 | 0.14381241816872323 | ||
CAC3400 | Predicted dehydrogenase | 1.319 | 1.397624039133473 | 2.471 | 2.290950744558992 | 1.8696436959231162 | 0.5958579444629863 | ||
CAC3402 | Dipeptidyl aminopeptidase/acylaminoacyl-peptidase related protein | 1.4344999999999999 | 1.524390243902439 | 0.764 | 1.2836970474967908 | 1.2516468228498074 | 0.3399269033468059 | ||
CAC3403 | Predicted membrane protein | 1.9144999999999999 | 1.736111111111111 | 1.061 | 0.9111617312072892 | 1.4056932105796 | 0.49377293413801177 | ||
CAC3405 | ABC-type MDR transporter, ATPase component | 2.2329999999999997 | 1.5220700152207 | 1.341 | 1.1061946902654867 | 1.5505661763715466 | 0.4857681047494378 | ||
CAC3408 | NADH oxidase (two distinct flavin oxidoreductase domains) | 0.7885 | 0.6576783952647156 | 1.1535 | 0.7471049682480388 | 0.8366958408781886 | 0.21814481780645803 | ||
CAC3409 | alsR Transcriptional regulators, LysR family | 0.6615 | 0.8077544426494346 | 1.51 | 0.8514261387824605 | 0.9576701453579738 | 0.37707096157180553 | ||
CAC3412 | Predicted protein-S-isoprenylcysteine methyltransferase | 0.245 | 0.19436345966958213 | 0.6759999999999999 | 0.3390405153415833 | 0.3636009937527913 | 0.21672093797150446 | ||
CAC3413 | Transcriptional regulator, MarR/EmrR family | 1.497 | 1.2626262626262625 | 0.856 | 1.2052087542087542 | 0.3243344380491472 | |||
CAC3414 | ABC-type multidrug/protein/lipid transport system, ATPase component | 1.06 | 1.2738853503184713 | 0.596 | 0.6868131868131868 | 0.9041746342829147 | 0.31790206155037193 | ||
CAC3415 | ABC-type multidrug/protein/lipid transport system, ATPase component | 1.366 | 1.349527665317139 | 0.861 | 0.5988023952095809 | 1.0438325151316799 | 0.37803039973902675 | ||
CAC3417 | Flavodoxin | 1.826 | 1.5372790161414296 | 3.205 | 2.1810250817884405 | 2.1873260244824677 | 0.7277402538786141 | ||
CAC3418 | Transcriptional regulator, MarR/EmrR family | 1.7715 | 1.5209125475285172 | 2.1645021645021645 | 1.8189715706768939 | 0.32441032857473834 | |||
CAC3419 | S-adenosylmethionine-dependent methyltransferase | 1.517 | 1.41643059490085 | 1.521 | 1.4848101983002833 | 0.0592522372640694 | |||
CAC3420 | Low specificity L-threonine aldolase | 1.235 | 1.3468013468013467 | 1.258 | 1.0964912280701753 | 1.2340731437178805 | 0.10361754162597643 | ||
CAC3422 | Sugar proton symporter (possible xylulose) | 0.5695 | 0.5616399887672002 | 1.045 | 0.3155569580309246 | 0.6229242366995312 | 0.30508605456678217 | ||
CAC3423 | Acetyltransferase (ribosomal protein N-acetylase subfamily) | 0.6214999999999999 | 0.6195786864931846 | 0.4465 | 0.2680965147453083 | 0.48891880030962315 | 0.16853448390007764 | ||
CAC3424 | Transcriptional regulator, RpiR family | 0.5165 | 0.5055611729019212 | 0.4405 | 0.3497114880223815 | 0.4530681652310757 | 0.07663696892358017 | ||
CAC3426 | glvG 6-phospho-alpha-glucosidase | 1.475 | 1.1376564277588168 | 2.0955 | 1.670843776106934 | 1.5947500509664378 | 0.39992308491608874 | ||
CAC3427 | PTS system, (possibly glucose-specific) IIA component | 1.1505 | 1.0570824524312896 | 1.7725 | 1.4174344436569808 | 1.3493792240220677 | 0.3207559053307953 | ||
CAC3429 | Response regulator (CheY-like receiver domain and HTH-type DNA-binding domain) | 1.4929999999999999 | 0.9157509157509157 | 1.5135 | 0.8223684210526316 | 1.1861548342008867 | 0.36822440931706607 | ||
CAC3430 | Membrane associated, signal transduction histidine kinase-like ATPase | 1.158 | 0.97323600973236 | 1.14 | 0.8639308855291576 | 1.0337917238153793 | 0.14050811684059028 | ||
CAC3431 | Membrane export protein, related to SecD/SecF protein exporters | 0.658 | 1.372683596431023 | 0.616 | 0.8822278654770077 | 0.4252659379955413 | |||
CAC3437 | Predicted membrane-associated Zn-dependent protease, HtpX family (BlaR subfamily) | 0.759 | 0.7886435331230284 | 0.9755 | 0.637551801083838 | 0.7901738335517167 | 0.1397777074295168 | ||
CAC3438 | Transcriptional regulator, (BlaI/MecI subfamily) | 0.889 | 0.8798944126704796 | 0.8775 | 0.6027727546714888 | 0.812291791835492 | 0.13976718843577685 | ||
CAC3440 | hypothetical protein | 1.0835 | 1.0758472296933836 | 1.589 | 1.2953367875647668 | 1.2609210043145376 | 0.24121276111295686 | ||
CAC3441 | DNA/RNA helicase, SNF2 | 1.2585000000000002 | 1.2461059190031152 | 1.5670000000000002 | 1.733102253032929 | 1.451177043009011 | 0.2394962701288597 | ||
CAC3442 | polC DNA polymerase III (alpha subunit) | 1.388 | 1.682085786375105 | 2.261 | 2.141327623126338 | 1.868103352375361 | 0.40584111902106035 | ||
CAC3443 | bltR Multidrug-efflux transporter transcription regulator, BltR | 1.6725 | 1.4492753623188408 | 1.221001221001221 | 1.4475921944400207 | 0.22575409553301132 | |||
CAC3446 | Predicted epimerase, PhzC/PhzF homolog | 1.31 | 1.1280315848843767 | 1.5975 | 1.345177194961459 | 0.2367028189139505 | |||
CAC3448 | Probable tesA-like protease | 1.2959999999999998 | 0.8673026886383347 | 2.2525 | 0.7987220447284346 | 1.3036311833416925 | 0.6697576824820077 | ||
CAC3449 | TPR-repeat-containing protein | 0.9894999999999999 | 1.1750881316098707 | 0.9954999999999999 | 1.0660980810234542 | 1.0565465531583311 | 0.08634284268594039 | ||
CAC3450 | hypothetical protein | 1.3559999999999999 | 1.7286084701815039 | 0.7915000000000001 | 0.9765625 | 1.213167742545376 | 0.4162795228284775 | ||
CAC3454 | Predicted TIM-barrel enzyme, nifR3 family | 1.306 | 1.1743981209630066 | 1.7245 | 1.5026296018031555 | 1.4268819306915406 | 0.23991299825872697 | ||
CAC3457 | Predicted membrane protein | 1.0995 | 1.0542962572482868 | 1.0085728693898133 | 1.0541230422127 | 0.0454638127837598 | |||
CAC3460 | Hypothetical protein, CF-28 family | 0.735 | 0.5401026194977046 | 1.2925 | 0.7513148009015778 | 0.8297293550998206 | 0.32309070387153027 | ||
CAC3461 | hypothetical protein | 2.6295 | 2.100840336134454 | 2.422 | 1.3642564802182808 | 2.1291492040881836 | 0.5543689441366986 | ||
CAC3464 | Uncharacterized conserved protein (fragment) | 1.5775 | 1.5455950540958268 | 2.0869999999999997 | 1.5302218821729152 | 1.6850792340671854 | 0.26866970402862705 | ||
CAC3465 | Amidase from nicotinamidase family | 1.9235 | 1.4316392269148175 | 1.6935 | 0.8837825894829873 | 1.483105454099451 | 0.4472321878682832 | ||
CAC3469 | Endoglucanase family 5, S-layer homology, cell-adhesion and dockerin domains | 0.05 | 0.040743985169189395 | 0.1 | 0.06374705169885893 | 0.06362275921701208 | 0.02602778621794114 | ||
CAC3475 | Transcriptional regulator, merR family | 1.1235 | 0.7380073800738007 | 1.4975 | 0.8019246190858058 | 1.0402329997899016 | 0.3484047992071489 | ||
CAC3476 | Methyl-accepting chemotaxis protein | 1.545 | 1.5444015444015444 | 1.1595 | 1.1614401858304297 | 1.3525854325579936 | 0.2218372347310226 | ||
CAC3481 | Transcriptional regulator, AcrR family | 1.3645 | 1.1813349084465445 | 1.049 | 0.9661835748792271 | 1.140254620831443 | 0.17378311672021635 | ||
CAC3484 | Short-chain alcohol dehydrogenase family protein | 1.403 | 2.0020020020020017 | 0.97 | 1.342281879194631 | 1.429320970299158 | 0.42708621872973385 | ||
CAC3485 | Transcriptional regulator, MarR/EmrR family | 2.2235 | 1.9047619047619047 | 0.888 | 0.9965122072745393 | 1.5031935280091109 | 0.6621398675218257 |
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Description: | The single sheets contain the transcript amount of the genes for all four microarrays (sheet 1 to 4). The first biological experiment will be represented by the 1. and 2. array. The 3. and 4. array showed the transcript level of the second biological experiment. The 1. and 3. array the cDNA of pH 4.5 was labeled by Cy3 and pH 5.7 by Cy5, respectively. The 2. and 4. array contained the transcript level of the dyeflip (pH 4.5 Cy5 / pH 5.7 Cy3). Furthermore, the 1. and 2. array were evaluated under high scanning conditions and the 3. and 4. array under low scanning conditions. | ||||||||
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1. Array (high Scan) | pH 4.5 / Cy3 | ||||||||
ORF | Name | (F 635 median - B635) - B635 SD | (F 532 median - B532) - B532 SD | pH 5.7 / Cy5 | |||||
CA_P0002 | Transglutaminase-like predicted protease domain fused ChW-repeats and cell-adhesion domain | 373.5 | 279 | ||||||
CA_P0003 | Transglutaminase-like predicted protease domain fused to ChW-repeats and cell-adhesion domain | 266 | 109 | ||||||
CA_P0004 | Cysteine protease | 415.5 | 20426.5 | ||||||
CA_P0005 | Uncharacterized protein similar to Bacteriocin immunity protein of mesC/lccI/entI family | 340.5 | 101.5 | ||||||
CA_P0006 | GntR family HTH transcriptional regulator | 1748.5 | 1721 | ||||||
CA_P0007 | hypothetical protein | 1246 | 1028 | ||||||
CA_P0009 | Response regulator (CheY + HTH domains) | 445 | 1880 | ||||||
CA_P0010 | bgla Beta_glucosidase | 660 | 2242.5 | ||||||
CA_P0012 | pedb Pediocin immunity protein, PedB | 3038 | 3942 | ||||||
CA_P0013 | FAD dependent dehydrogenase | 1007.5 | 603 | ||||||
CA_P0014 | Protein tyrosine phosphatase II superfamily protein | 1855 | 1464.5 | ||||||
CA_P0015 | GLPQ related phosphodiesterase | 3905.5 | 3969 | ||||||
CA_P0018 | hypothetical protein | 63 | 32 | ||||||
CA_P0019 | grkc Spore germination protein, GRKC | 129 | 127.5 | ||||||
CA_P0020 | grka Spore germination protein, GRKA | 168 | 213.5 | ||||||
CA_P0024 | MarR family HTH transcriptional regulator | 95 | 81 | ||||||
CA_P0025 | pdc Pyruvate decarboxylase | 5988 | 5220.5 | ||||||
CA_P0026 | hypothetical protein | 5853.5 | 5351 | ||||||
CA_P0027 | Predicted amino acid permeases | 235.5 | 219.5 | ||||||
CA_P0028 | HTH transcriptional regulator TetR family | 657 | 496 | ||||||
CA_P0031 | hlyU Transcriptional activator HLYU, HTH of ArsR family | 458.5 | 346 | ||||||
CA_P0032 | Rhodanese-like domain | 257.5 | 247 | ||||||
CA_P0033 | hypothetical protein | 411.5 | 417.5 | ||||||
CA_P0034 | Rhodanese-like domain | 2115 | 2481 | ||||||
CA_P0035 | adhe Aldehyde-alcohol dehydrogenase, ADHE1 | 2648.5 | 850.5 | ||||||
CA_P0036 | Uncharacterized, ortholog of YgaT gene of B,subtillis | 46107.5 | 445 | ||||||
CA_P0037 | Uncharacterized, ortholog of YgaS gene of B,subtillis | 46444.5 | 354.5 | ||||||
CA_P0038 | Uncharacterized conserved protein, YCII family | 988.5 | 178.5 | ||||||
CA_P0040 | Xre family DNA-binding domain and TPR repeats containing protein | 403 | 1927.5 | ||||||
CA_P0044 | hypothetical protein | 208 | 1194.5 | ||||||
CA_P0045 | Glycosyl transferase | 356.5 | 1915 | ||||||
CA_P0046 | TetR family HTH transcriptional regulator | 78 | 135 | ||||||
CA_P0047 | Sulphohydrolase/Glycosulfatase, Zn-dependent hydrolase | 107 | 70 | ||||||
CA_P0048 | Related to methyl-accepting chemotaxis protein | 1133.5 | 688.5 | ||||||
CA_P0049 | Permease, MDR related | 166 | 147 | ||||||
CA_P0050 | pnba Para-nitrobenzyl esterase, a/b hydrolase | 1928.5 | 1907 | ||||||
CA_P0052 | MarR family HTH transcriptional regulator | 473.5 | 317 | ||||||
CA_P0053 | xynb Xylanase, glycosyl hydrolase family 10 | 311.5 | 5611 | ||||||
CA_P0054 | Xylanase/chitin deacetylase family enzyme | 439 | 7819.5 | ||||||
CA_P0055 | hypothetical protein | 294.5 | 241 | ||||||
CA_P0056 | pell Pectate lyase, secreted, polysaccharide lyase family | 434 | 4597 | ||||||
CA_P0057 | Putative glycoportein or S-layer protein | 684.5 | 1091.5 | ||||||
CA_P0058 | Rare lipoprotein A RLPA releated protein | 11422 | 9077.5 | ||||||
CA_P0059 | Alcohol dehydrogenase | 1053 | 982 | ||||||
CA_P0062 | Hypothetical protein, CF-18 family | 138.5 | 69 | ||||||
CA_P0064 | alf Fructose-bisphosphate aldolase class I | 85.5 | 76 | ||||||
CA_P0065 | Predicted secreted metalloprotease | 310 | 4875 | ||||||
CA_P0066 | ptna Mannose-specific phosphotransferase system component IIAB | 104.5 | 15 | ||||||
CA_P0067 | manY/levF Mannose/fructose-specific phosphotransferase system component IIC | 204 | 52 | ||||||
CA_P0072 | hypothetical protein | 5976.5 | 2992.5 | ||||||
CA_P0073 | ABC ATPase containing transporter | 2071.5 | 725 | ||||||
CA_P0074 | hypothetical protein | 1774 | 546 | ||||||
CA_P0076 | penicillin binding protein 1A | 928 | 564.5 | ||||||
CA_P0077 | Uncharacterized Fe-S protein | 142.5 | 71.5 | ||||||
CA_P0079 | thlr ThlR, HTH transcriptional regulator TetR/AcrR family | 2049.5 | 1822.5 | ||||||
CA_P0080 | Site-Specific Recombinase, Xerd | 292.5 | 297.5 | ||||||
CA_P0081 | TnpR resolvase C-terminal fragment | 224 | 161.5 | ||||||
CA_P0082 | crp CRP (cyclic AMP receptor protein) regulatory protein | 722.5 | 711.5 | ||||||
CA_P0083 | SAM-dependent methyltransferase | 1307.5 | 605 | ||||||
CA_P0084 | hypothetical protein | 1124 | 831 | ||||||
CA_P0085 | Hypothetical secreted protein (fragment) | 631.5 | 489 | ||||||
CA_P0086 | Permease, MDR related, probably tetracycline resistance protein | 635.5 | 606.5 | ||||||
CA_P0087 | HTH transcriptional regulator TetR/AcrR family | 3898.5 | 2437.5 | ||||||
CA_P0088 | abf 3-oxoacyl-acyl-carrier protein synthase | 1694 | 1179.5 | ||||||
CA_P0089 | Predicted membrane protein | 158 | 86 | ||||||
CA_P0090 | ABC-type transporter, ATPase component | 330 | 239 | ||||||
CA_P0091 | Predicted regulator of stationary/sporulation gene expression | 1641.5 | 1946 | ||||||
CA_P0093 | tnpa TnpA, transposase (3' segment) | 427.5 | 420.5 | ||||||
CA_P0094 | TnpA, transposase (5' segment) | 589.5 | 522.5 | ||||||
CA_P0096 | ipyr Inorganic pyrophosphatase | 820.5 | 1010.5 | ||||||
CA_P0097 | lipg Carboxyl esterase, a/b hydrolase | 2128 | 2506 | ||||||
CA_P0098 | amyA alpha-amylase | 295.5 | 261.5 | ||||||
CA_P0099 | muts DNA mismatch repair protein, MUTS fragment | 234 | 182.5 | ||||||
CA_P0100 | HTH transcriptional regulator TetR/AcrR family | 638 | 838 | ||||||
CA_P0101 | hypothetical protein | 742 | 1077.5 | ||||||
CA_P0102 | Membrane protein | 891.5 | 8260.5 | ||||||
CA_P0103 | arsr Transcriptional regulator HTH-type, ArsR family | 426 | 516 | ||||||
CA_P0104 | arsb Heavy metal resistance membrane protein | 212 | 334 | ||||||
CA_P0105 | arsc Arsenate reductase, arsC, protein-tyrosine-phosphatase family enzyme | 259 | 556 | ||||||
CA_P0107 | HTH transcriptional regulator MerR family | 301.5 | 233.5 | ||||||
CA_P0108 | Predicted HTH containing transcriptional regulator | 861 | 780 | ||||||
CA_P0110 | NH2-acetyltransferase | 372.5 | 235 | ||||||
CA_P0111 | NH2-acetyltransferase | 167 | 37 | ||||||
CA_P0112 | hypothetical protein | 3320.5 | 12481.5 | ||||||
CA_P0113 | Solo B3/4 domain (OB-fold DNA/RNA-binding) of Phe-aaRS-beta | 3682 | 3518.5 | ||||||
CA_P0114 | Possible beta-xylosidase, family 43 of glycosyl hydrolases | 97 | 252.5 | ||||||
CA_P0115 | xynD Endo-1,4-beta-xylanase XynD B,subtilis ortholog (family 43 glycosyl hydrolase and cellulose-binding domain) | 3 | 99 | ||||||
CA_P0116 | Xylanase, glycosyl hydrolase family 10 | 253.5 | 1616 | ||||||
CA_P0117 | Possible beta-xylosidase diverged, family 5/39 of glycosyl hydrolases and alpha-amylase C (Greek key) C-terminal domain | 181.5 | 1570.5 | ||||||
CA_P0118 | Possible xylan degradation enzyme (glycosyl hydrolase family 30-like domain and Ricin B-like domain) | 194 | 1459 | ||||||
CA_P0119 | Possible xylan degradation enzyme (glycosyl hydrolase family 30-like domain and Ricin B-like domain) | 78 | 1033.5 | ||||||
CA_P0120 | Possible xylan degradation enzyme (glycosyl hydrolase family 43-like domain, cellulose-binding domain and Ricin B-like domain) | 96 | 1150.5 | ||||||
CA_P0121 | Leu-rich protein family protein, YaeG (E,coli) homolog | 23 | 67 | ||||||
CA_P0123 | hypothetical protein | 597.5 | 758.5 | ||||||
CA_P0124 | Permease, MDR related, probably tetracycline resistance protein | 1910 | 2061.5 | ||||||
CA_P0125 | hypothetical protein | 1040 | 703.5 | ||||||
CA_P0126 | Uncharacterized protein (NN,term domain homologous to B,subtilis (gi|833839) | 2070 | 1554 | ||||||
CA_P0127 | HTH transcriptional regulator TetR family | 393 | 205 |
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2. array (high scan) | pH 4.5 / Cy5 | ||||||||||
ORF | Name | (F 635 median - B635) - B635 SD | (F 532 median - B532) - B532 SD | pH 5.7 / Cy3 | |||||||
CA_P0001 | Oxidoreductase | 89 | 117 | ||||||||
CA_P0002 | Transglutaminase-like predicted protease domain fused ChW-repeats and cell-adhesion domain | 279 | 286 | ||||||||
CA_P0003 | Transglutaminase-like predicted protease domain fused to ChW-repeats and cell-adhesion domain | 155.5 | 237.5 | ||||||||
CA_P0004 | Cysteine protease | 16476 | 271 | ||||||||
CA_P0005 | Uncharacterized protein similar to Bacteriocin immunity protein of mesC/lccI/entI family | 162.5 | 229.5 | ||||||||
CA_P0006 | GntR family HTH transcriptional regulator | 1599 | 1544 | ||||||||
CA_P0007 | hypothetical protein | 957.5 | 1054 | ||||||||
CA_P0009 | Response regulator (CheY + HTH domains) | 3064 | 814.5 | ||||||||
CA_P0010 | bgla Beta_glucosidase | 2148.5 | 642.5 | ||||||||
CA_P0012 | pedb Pediocin immunity protein, PedB | 3817.5 | 2461.5 | ||||||||
CA_P0013 | FAD dependent dehydrogenase | 664 | 744.5 | ||||||||
CA_P0014 | Protein tyrosine phosphatase II superfamily protein | 1588 | 1583.5 | ||||||||
CA_P0015 | GLPQ related phosphodiesterase | 3664 | 3275 | ||||||||
CA_P0019 | grkc Spore germination protein, GRKC | 116 | 94 | ||||||||
CA_P0020 | grka Spore germination protein, GRKA | 201 | 85 | ||||||||
CA_P0021 | hypothetical protein | 19 | 32 | ||||||||
CA_P0023 | hypothetical protein | 44 | 49 | ||||||||
CA_P0024 | MarR family HTH transcriptional regulator | 106.5 | 118 | ||||||||
CA_P0025 | pdc Pyruvate decarboxylase | 5205.5 | 5797 | ||||||||
CA_P0026 | hypothetical protein | 5122 | 5912 | ||||||||
CA_P0027 | Predicted amino acid permeases | 206.5 | 114.5 | ||||||||
CA_P0028 | HTH transcriptional regulator TetR family | 468 | 431.5 | ||||||||
CA_P0031 | hlyU Transcriptional activator HLYU, HTH of ArsR family | 406.5 | 375 | ||||||||
CA_P0032 | Rhodanese-like domain | 228.5 | 167.5 | ||||||||
CA_P0033 | hypothetical protein | 399.5 | 297 | ||||||||
CA_P0034 | Rhodanese-like domain | 2499 | 1767.5 | ||||||||
CA_P0035 | adhe Aldehyde-alcohol dehydrogenase, ADHE1 | 814.5 | 2786.5 | ||||||||
CA_P0036 | Uncharacterized, ortholog of YgaT gene of B,subtillis | 3232.5 | 60284.5 | ||||||||
CA_P0037 | Uncharacterized, ortholog of YgaS gene of B,subtillis | 1103.5 | 61929.5 | ||||||||
CA_P0038 | Uncharacterized conserved protein, YCII family | 171.5 | 622 | ||||||||
CA_P0040 | Xre family DNA-binding domain and TPR repeats containing protein | 1605.5 | 255 | ||||||||
CA_P0044 | hypothetical protein | 1393 | 187 | ||||||||
CA_P0045 | Glycosyl transferase | 1757 | 261.5 | ||||||||
CA_P0046 | TetR family HTH transcriptional regulator | 157 | 7 | ||||||||
CA_P0047 | Sulphohydrolase/Glycosulfatase, Zn-dependent hydrolase | 107 | 76.5 | ||||||||
CA_P0048 | Related to methyl-accepting chemotaxis protein | 601 | 1031.5 | ||||||||
CA_P0049 | Permease, MDR related | 211.5 | 152.5 | ||||||||
CA_P0050 | pnba Para-nitrobenzyl esterase, a/b hydrolase | 2205 | 2468 | ||||||||
CA_P0051 | Oxidoreductase | 98.5 | 62.5 | ||||||||
CA_P0052 | MarR family HTH transcriptional regulator | 259.5 | 354 | ||||||||
CA_P0053 | xynb Xylanase, glycosyl hydrolase family 10 | 4608.5 | 241.5 | ||||||||
CA_P0054 | Xylanase/chitin deacetylase family enzyme | 6967 | 350 | ||||||||
CA_P0055 | hypothetical protein | 249 | 196 | ||||||||
CA_P0056 | pell Pectate lyase, secreted, polysaccharide lyase family | 4865 | 396 | ||||||||
CA_P0057 | Putative glycoportein or S-layer protein | 1320.5 | 688 | ||||||||
CA_P0058 | Rare lipoprotein A RLPA releated protein | 8917 | 10583 | ||||||||
CA_P0059 | Alcohol dehydrogenase | 837 | 775.5 | ||||||||
CA_P0062 | Hypothetical protein, CF-18 family | 151 | 123.5 | ||||||||
CA_P0064 | alf Fructose-bisphosphate aldolase class I | 124 | 32.5 | ||||||||
CA_P0065 | Predicted secreted metalloprotease | 4264.5 | 229.5 | ||||||||
CA_P0066 | ptna Mannose-specific phosphotransferase system component IIAB | 38 | 51 | ||||||||
CA_P0067 | manY/levF Mannose/fructose-specific phosphotransferase system component IIC | 69.5 | 159.5 | ||||||||
CA_P0072 | hypothetical protein | 2581 | 5461.5 | ||||||||
CA_P0073 | ABC ATPase containing transporter | 701 | 1729.5 | ||||||||
CA_P0074 | hypothetical protein | 599.5 | 1349 | ||||||||
CA_P0076 | penicillin binding protein 1A | 530.5 | 935.5 | ||||||||
CA_P0078 | thil Acetyl coenzyme A acetyltransferase (thiolase) | 259.5 | 283.5 | ||||||||
CA_P0079 | thlr ThlR, HTH transcriptional regulator TetR/AcrR family | 1417.5 | 1399.5 | ||||||||
CA_P0080 | Site-Specific Recombinase, Xerd | 300 | 254 | ||||||||
CA_P0081 | TnpR resolvase C-terminal fragment | 136 | 109 | ||||||||
CA_P0082 | crp CRP (cyclic AMP receptor protein) regulatory protein | 740.5 | 617.5 | ||||||||
CA_P0083 | SAM-dependent methyltransferase | 708.5 | 1280.5 | ||||||||
CA_P0084 | hypothetical protein | 887.5 | 1064 | ||||||||
CA_P0085 | Hypothetical secreted protein (fragment) | 474.5 | 507 | ||||||||
CA_P0086 | Permease, MDR related, probably tetracycline resistance protein | 605.5 | 584 | ||||||||
CA_P0087 | HTH transcriptional regulator TetR/AcrR family | 2460 | 3028.5 | ||||||||
CA_P0088 | abf 3-oxoacyl-acyl-carrier protein synthase | 1536.5 | 1659.5 | ||||||||
CA_P0089 | Predicted membrane protein | 134 | 123 | ||||||||
CA_P0090 | ABC-type transporter, ATPase component | 167.5 | 214.5 | ||||||||
CA_P0091 | Predicted regulator of stationary/sporulation gene expression | 2159 | 1306 | ||||||||
CA_P0093 | tnpa TnpA, transposase (3' segment) | 385.5 | 425.5 | ||||||||
CA_P0094 | TnpA, transposase (5' segment) | 464.5 | 407.5 | ||||||||
CA_P0096 | ipyr Inorganic pyrophosphatase | 959 | 746 | ||||||||
CA_P0097 | lipg Carboxyl esterase, a/b hydrolase | 2062.5 | 1594 | ||||||||
CA_P0098 | amyA alpha-amylase | 297 | 309 | ||||||||
CA_P0099 | muts DNA mismatch repair protein, MUTS fragment | 211 | 148 | ||||||||
CA_P0100 | HTH transcriptional regulator TetR/AcrR family | 942 | 583 | ||||||||
CA_P0101 | hypothetical protein | 1041.5 | 599.5 | ||||||||
CA_P0102 | Membrane protein | 8135.5 | 733 | ||||||||
CA_P0103 | arsr Transcriptional regulator HTH-type, ArsR family | 587 | 263.5 | ||||||||
CA_P0104 | arsb Heavy metal resistance membrane protein | 468.5 | 269 | ||||||||
CA_P0105 | arsc Arsenate reductase, arsC, protein-tyrosine-phosphatase family enzyme | 463 | 214 | ||||||||
CA_P0106 | dxs 1-deoxyxylulose-5-phosphate synthase, dehydrogenase | 107 | 109 | ||||||||
CA_P0108 | Predicted HTH containing transcriptional regulator | 782.5 | 600 | ||||||||
CA_P0110 | NH2-acetyltransferase | 226 | 274 | ||||||||
CA_P0111 | NH2-acetyltransferase | 52 | 152 | ||||||||
CA_P0112 | hypothetical protein | 11961.5 | 2907 | ||||||||
CA_P0113 | Solo B3/4 domain (OB-fold DNA/RNA-binding) of Phe-aaRS-beta | 3998.5 | 2880.5 | ||||||||
CA_P0114 | Possible beta-xylosidase, family 43 of glycosyl hydrolases | 293.5 | 65 | ||||||||
CA_P0116 | Xylanase, glycosyl hydrolase family 10 | 2110.5 | 306 | ||||||||
CA_P0117 | Possible beta-xylosidase diverged, family 5/39 of glycosyl hydrolases and alpha-amylase C (Greek key) C-terminal domain | 1687 | 154 | ||||||||
CA_P0118 | Possible xylan degradation enzyme (glycosyl hydrolase family 30-like domain and Ricin B-like domain) | 1520 | 203 | ||||||||
CA_P0119 | Possible xylan degradation enzyme (glycosyl hydrolase family 30-like domain and Ricin B-like domain) | 797.5 | 16 | ||||||||
CA_P0120 | Possible xylan degradation enzyme (glycosyl hydrolase family 43-like domain, cellulose-binding domain and Ricin B-like domain) | 1005 | 35 | ||||||||
CA_P0122 | dTDP-4-keto-L-rhamnose reductase | 11 | 20 | ||||||||
CA_P0123 | hypothetical protein | 833 | 555.5 | ||||||||
CA_P0124 | Permease, MDR related, probably tetracycline resistance protein | 2063.5 | 1624 | ||||||||
CA_P0125 | hypothetical protein | 693.5 | 846.5 |
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3. array (low scan) | pH 4.5 / Cy3 | ||||||||
ORF | Name | (F 635 median - B635) - B635 SD | (F 532 median - B532) - B532 SD | pH 5.7 / Cy5 | |||||
CA_P0002 | Transglutaminase-like predicted protease domain fused ChW-repeats and cell-adhesion domain | 106.5 | 14.5 | ||||||
CA_P0003 | Transglutaminase-like predicted protease domain fused to ChW-repeats and cell-adhesion domain | 64 | 10 | ||||||
CA_P0004 | Cysteine protease | 167.5 | 4352 | ||||||
CA_P0005 | Uncharacterized protein similar to Bacteriocin immunity protein of mesC/lccI/entI family | 50 | 62.5 | ||||||
CA_P0006 | GntR family HTH transcriptional regulator | 326.5 | 314 | ||||||
CA_P0007 | hypothetical protein | 523.5 | 311 | ||||||
CA_P0009 | Response regulator (CheY + HTH domains) | 197 | 376 | ||||||
CA_P0010 | bgla Beta_glucosidase | 181 | 522.5 | ||||||
CA_P0012 | pedb Pediocin immunity protein, PedB | 1352.5 | 1527.5 | ||||||
CA_P0013 | FAD dependent dehydrogenase | 232.5 | 107.5 | ||||||
CA_P0014 | Protein tyrosine phosphatase II superfamily protein | 534 | 238.5 | ||||||
CA_P0015 | GLPQ related phosphodiesterase | 725.5 | 1011.5 | ||||||
CA_P0018 | hypothetical protein | 9 | 7 | ||||||
CA_P0019 | grkc Spore germination protein, GRKC | 22.5 | 27.5 | ||||||
CA_P0020 | grka Spore germination protein, GRKA | 52 | 85.5 | ||||||
CA_P0025 | pdc Pyruvate decarboxylase | 1341 | 601.5 | ||||||
CA_P0026 | hypothetical protein | 1107 | 650 | ||||||
CA_P0027 | Predicted amino acid permeases | 20.5 | 54 | ||||||
CA_P0028 | HTH transcriptional regulator TetR family | 130 | 41 | ||||||
CA_P0031 | hlyU Transcriptional activator HLYU, HTH of ArsR family | 107 | 77.5 | ||||||
CA_P0032 | Rhodanese-like domain | 42.5 | 10.5 | ||||||
CA_P0033 | hypothetical protein | 105 | 71 | ||||||
CA_P0034 | Rhodanese-like domain | 519 | 591 | ||||||
CA_P0035 | adhe Aldehyde-alcohol dehydrogenase, ADHE1 | 324 | 81 | ||||||
CA_P0036 | Uncharacterized, ortholog of YgaT gene of B.subtillis | 36982.5 | 101.5 | ||||||
CA_P0037 | Uncharacterized, ortholog of YgaS gene of B.subtillis | 27184.5 | 32 | ||||||
CA_P0038 | Uncharacterized conserved protein, YCII family | 153.5 | 22 | ||||||
CA_P0044 | hypothetical protein | 76.5 | 268.5 | ||||||
CA_P0045 | Glycosyl transferase | 84 | 377 | ||||||
CA_P0046 | TetR family HTH transcriptional regulator | 10 | 25 | ||||||
CA_P0047 | Sulphohydrolase/Glycosulfatase, Zn-dependent hydrolase | 31 | 19 | ||||||
CA_P0048 | Related to methyl-accepting chemotaxis protein | 248 | 125.5 | ||||||
CA_P0049 | Permease, MDR related | 33.5 | 69.5 | ||||||
CA_P0050 | pnba Para-nitrobenzyl esterase, a/b hydrolase | 471 | 327.5 | ||||||
CA_P0051 | Oxidoreductase | 37 | 32.5 | ||||||
CA_P0052 | MarR family HTH transcriptional regulator | 28 | 42 | ||||||
CA_P0053 | xynb Xylanase, glycosyl hydrolase family 10 | 102.5 | 2182 | ||||||
CA_P0054 | Xylanase/chitin deacetylase family enzyme | 150 | 2618.5 | ||||||
CA_P0055 | hypothetical protein | 102 | 218.5 | ||||||
CA_P0056 | pell Pectate lyase, secreted, polysaccharide lyase family | 140 | 904 | ||||||
CA_P0057 | Putative glycoportein or S-layer protein | 554.5 | 373.5 | ||||||
CA_P0058 | Rare lipoprotein A RLPA releated protein | 2633.5 | 1793.5 | ||||||
CA_P0059 | Alcohol dehydrogenase | 181.5 | 176 | ||||||
CA_P0061 | hypothetical protein | 18 | 11 | ||||||
CA_P0062 | Hypothetical protein, CF-18 family | 42 | 7.5 | ||||||
CA_P0065 | Predicted secreted metalloprotease | 112.5 | 1834.5 | ||||||
CA_P0066 | ptna Mannose-specific phosphotransferase system component IIAB | 46 | 6 | ||||||
CA_P0067 | manY/levF Mannose/fructose-specific phosphotransferase system component IIC | 40.5 | 7 | ||||||
CA_P0070 | HAD phosphatase superfamily protein | 5 | 16 | ||||||
CA_P0072 | hypothetical protein | 2495 | 384.5 | ||||||
CA_P0073 | ABC ATPase containing transporter | 1289.5 | 145 | ||||||
CA_P0074 | hypothetical protein | 1090.5 | 105.5 | ||||||
CA_P0076 | penicillin binding protein 1A | 320 | 106 | ||||||
CA_P0077 | Uncharacterized Fe-S protein | 4 | 2 | ||||||
CA_P0078 | thil Acetyl coenzyme A acetyltransferase (thiolase) | 66.5 | 29.5 | ||||||
CA_P0079 | thlr ThlR, HTH transcriptional regulator TetR/AcrR family | 267 | 76.5 | ||||||
CA_P0080 | Site-Specific Recombinase, Xerd | 67 | 52.5 | ||||||
CA_P0082 | crp CRP (cyclic AMP receptor protein) regulatory protein | 122.5 | 188 | ||||||
CA_P0083 | SAM-dependent methyltransferase | 365 | 90.5 | ||||||
CA_P0084 | hypothetical protein | 260 | 168.5 | ||||||
CA_P0085 | Hypothetical secreted protein (fragment) | 138.5 | 105 | ||||||
CA_P0086 | Permease, MDR related, probably tetracycline resistance protein | 296.5 | 203.5 | ||||||
CA_P0087 | HTH transcriptional regulator TetR/AcrR family | 853.5 | 930 | ||||||
CA_P0088 | abf 3-oxoacyl-acyl-carrier protein synthase | 941.5 | 1379.5 | ||||||
CA_P0089 | Predicted membrane protein | 36.5 | 80.5 | ||||||
CA_P0090 | ABC-type transporter, ATPase component | 66 | 128.5 | ||||||
CA_P0091 | Predicted regulator of stationary/sporulation gene expression | 257.5 | 291.5 | ||||||
CA_P0093 | tnpa TnpA, transposase (3' segment) | 98.5 | 66.5 | ||||||
CA_P0094 | TnpA, transposase (5' segment) | 104.5 | 29 | ||||||
CA_P0096 | ipyr Inorganic pyrophosphatase | 204 | 129 | ||||||
CA_P0097 | lipg Carboxyl esterase, a/b hydrolase | 671.5 | 391 | ||||||
CA_P0098 | amyA alpha-amylase | 81 | 36.5 | ||||||
CA_P0099 | muts DNA mismatch repair protein, MUTS fragment | 11 | 11 | ||||||
CA_P0100 | HTH transcriptional regulator TetR/AcrR family | 85 | 189.5 | ||||||
CA_P0101 | hypothetical protein | 58.5 | 158.5 | ||||||
CA_P0102 | Membrane protein | 197.5 | 1702 | ||||||
CA_P0103 | arsr Transcriptional regulator HTH-type, ArsR family | 68.5 | 77.5 | ||||||
CA_P0104 | arsb Heavy metal resistance membrane protein | 72.5 | 117.5 | ||||||
CA_P0105 | arsc Arsenate reductase, arsC, protein-tyrosine-phosphatase family enzyme | 81 | 195 | ||||||
CA_P0106 | dxs 1-deoxyxylulose-5-phosphate synthase, dehydrogenase | 27 | 15 | ||||||
CA_P0107 | HTH transcriptional regulator MerR family | 50 | 36.5 | ||||||
CA_P0108 | Predicted HTH containing transcriptional regulator | 111 | 105.5 | ||||||
CA_P0110 | NH2-acetyltransferase | 52.5 | 66.5 | ||||||
CA_P0111 | NH2-acetyltransferase | 15 | 23.5 | ||||||
CA_P0112 | hypothetical protein | 838.5 | 4584.5 | ||||||
CA_P0113 | Solo B3/4 domain (OB-fold DNA/RNA-binding) of Phe-aaRS-beta | 990.5 | 461.5 | ||||||
CA_P0114 | Possible beta-xylosidase, family 43 of glycosyl hydrolases | 36 | 37.5 | ||||||
CA_P0116 | Xylanase, glycosyl hydrolase family 10 | 59 | 217 | ||||||
CA_P0117 | Possible beta-xylosidase diverged, family 5/39 of glycosyl hydrolases and alpha-amylase C (Greek key) C-terminal domain | 55 | 251.5 | ||||||
CA_P0118 | Possible xylan degradation enzyme (glycosyl hydrolase family 30-like domain and Ricin B-like domain) | 38 | 244 | ||||||
CA_P0119 | Possible xylan degradation enzyme (glycosyl hydrolase family 30-like domain and Ricin B-like domain) | 24.5 | 189.5 | ||||||
CA_P0120 | Possible xylan degradation enzyme (glycosyl hydrolase family 43-like domain, cellulose-binding domain and Ricin B-like domain) | 28 | 211.5 | ||||||
CA_P0121 | Leu-rich protein family protein, YaeG (E.coli) homolog | 1 | 7 | ||||||
CA_P0123 | hypothetical protein | 127.5 | 96 | ||||||
CA_P0124 | Permease, MDR related, probably tetracycline resistance protein | 507 | 909.5 | ||||||
CA_P0125 | hypothetical protein | 223 | 119 | ||||||
CA_P0126 | Uncharacterized protein (NN.term domain homologous to B.subtilis (gi|833839) | 271 | 159 | ||||||
CA_P0127 | HTH transcriptional regulator TetR family | 62 | 29 |
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4. array (low scan) | pH 4.5 / Cy5 | ||||||||
ORF | Name | (F 635 median - B635) - B635 SD | (F 532 median - B532) - B532 SD | pH 5.7 / Cy3 | |||||
CA_P0002 | Transglutaminase-like predicted protease domain fused ChW-repeats and cell-adhesion domain | 16.5 | 45 | ||||||
CA_P0003 | Transglutaminase-like predicted protease domain fused to ChW-repeats and cell-adhesion domain | 8.5 | 28.5 | ||||||
CA_P0004 | Cysteine protease | 3907 | 131.5 | ||||||
CA_P0005 | Uncharacterized protein similar to Bacteriocin immunity protein of mesC/lccI/entI family | 102 | 33 | ||||||
CA_P0006 | GntR family HTH transcriptional regulator | 269.5 | 312 | ||||||
CA_P0007 | hypothetical protein | 159.5 | 180 | ||||||
CA_P0009 | Response regulator (CheY + HTH domains) | 596 | 133.5 | ||||||
CA_P0010 | bgla Beta_glucosidase | 508.5 | 160 | ||||||
CA_P0012 | pedb Pediocin immunity protein, PedB | 2200 | 842 | ||||||
CA_P0013 | FAD dependent dehydrogenase | 190.5 | 138 | ||||||
CA_P0014 | Protein tyrosine phosphatase II superfamily protein | 389.5 | 371.5 | ||||||
CA_P0015 | GLPQ related phosphodiesterase | 1249.5 | 475.5 | ||||||
CA_P0017 | grkb1 Spore germination protein, GRKB | 10 | 3 | ||||||
CA_P0019 | grkc Spore germination protein, GRKC | 43.5 | 12 | ||||||
CA_P0020 | grka Spore germination protein, GRKA | 88 | 31.5 | ||||||
CA_P0021 | hypothetical protein | 13 | 7 | ||||||
CA_P0023 | hypothetical protein | 3 | 12 | ||||||
CA_P0025 | pdc Pyruvate decarboxylase | 788.5 | 1078.5 | ||||||
CA_P0026 | hypothetical protein | 602 | 485 | ||||||
CA_P0027 | Predicted amino acid permeases | 61 | 28.5 | ||||||
CA_P0028 | HTH transcriptional regulator TetR family | 83 | 92 | ||||||
CA_P0031 | hlyU Transcriptional activator HLYU, HTH of ArsR family | 80.5 | 69 | ||||||
CA_P0032 | Rhodanese-like domain | 21 | 17 | ||||||
CA_P0033 | hypothetical protein | 87.5 | 59 | ||||||
CA_P0034 | Rhodanese-like domain | 636 | 396.5 | ||||||
CA_P0035 | adhe Aldehyde-alcohol dehydrogenase, ADHE1 | 87 | 243 | ||||||
CA_P0036 | Uncharacterized, ortholog of YgaT gene of B.subtillis | 258 | 54827.5 | ||||||
CA_P0037 | Uncharacterized, ortholog of YgaS gene of B.subtillis | 76 | 28223 | ||||||
CA_P0038 | Uncharacterized conserved protein, YCII family | 30.5 | 108.5 | ||||||
CA_P0040 | Xre family DNA-binding domain and TPR repeats containing protein | 233 | 48 | ||||||
CA_P0044 | hypothetical protein | 290 | 37.5 | ||||||
CA_P0045 | Glycosyl transferase | 329 | 25 | ||||||
CA_P0046 | TetR family HTH transcriptional regulator | 12 | 7 | ||||||
CA_P0047 | Sulphohydrolase/Glycosulfatase, Zn-dependent hydrolase | 29 | 18 | ||||||
CA_P0048 | Related to methyl-accepting chemotaxis protein | 124.5 | 173.5 | ||||||
CA_P0049 | Permease, MDR related | 120.5 | 25.5 | ||||||
CA_P0050 | pnba Para-nitrobenzyl esterase, a/b hydrolase | 338 | 427.5 | ||||||
CA_P0051 | Oxidoreductase | 38.5 | 21.5 | ||||||
CA_P0052 | MarR family HTH transcriptional regulator | 58 | 24 | ||||||
CA_P0053 | xynb Xylanase, glycosyl hydrolase family 10 | 1977.5 | 82.5 | ||||||
CA_P0054 | Xylanase/chitin deacetylase family enzyme | 3082.5 | 98 | ||||||
CA_P0055 | hypothetical protein | 221.5 | 75.5 | ||||||
CA_P0056 | pell Pectate lyase, secreted, polysaccharide lyase family | 1006 | 88.5 | ||||||
CA_P0057 | Putative glycoportein or S-layer protein | 455 | 399.5 | ||||||
CA_P0058 | Rare lipoprotein A RLPA releated protein | 1842 | 2759.5 | ||||||
CA_P0059 | Alcohol dehydrogenase | 146 | 155.5 | ||||||
CA_P0061 | hypothetical protein | 1 | 10 | ||||||
CA_P0062 | Hypothetical protein, CF-18 family | 12.5 | 22 | ||||||
CA_P0064 | alf Fructose-bisphosphate aldolase class I | 6.5 | 7 | ||||||
CA_P0065 | Predicted secreted metalloprotease | 1836 | 93 | ||||||
CA_P0066 | ptna Mannose-specific phosphotransferase system component IIAB | 2 | 21 | ||||||
CA_P0067 | manY/levF Mannose/fructose-specific phosphotransferase system component IIC | 3 | 30 | ||||||
CA_P0072 | hypothetical protein | 584 | 1204 | ||||||
CA_P0073 | ABC ATPase containing transporter | 153.5 | 339.5 | ||||||
CA_P0074 | hypothetical protein | 154.5 | 348.5 | ||||||
CA_P0076 | penicillin binding protein 1A | 119.5 | 179.5 | ||||||
CA_P0077 | Uncharacterized Fe-S protein | 3.5 | 8.5 | ||||||
CA_P0078 | thil Acetyl coenzyme A acetyltransferase (thiolase) | 31 | 76.5 | ||||||
CA_P0079 | thlr ThlR, HTH transcriptional regulator TetR/AcrR family | 122.5 | 172.5 | ||||||
CA_P0080 | Site-Specific Recombinase, Xerd | 51 | 42 | ||||||
CA_P0081 | TnpR resolvase C-terminal fragment | 22 | 24 | ||||||
CA_P0082 | crp CRP (cyclic AMP receptor protein) regulatory protein | 249 | 92 | ||||||
CA_P0083 | SAM-dependent methyltransferase | 117.5 | 286 | ||||||
CA_P0084 | hypothetical protein | 210 | 219.5 | ||||||
CA_P0085 | Hypothetical secreted protein (fragment) | 120.5 | 101.5 | ||||||
CA_P0086 | Permease, MDR related, probably tetracycline resistance protein | 223 | 257 | ||||||
CA_P0087 | HTH transcriptional regulator TetR/AcrR family | 1078.5 | 746.5 | ||||||
CA_P0088 | abf 3-oxoacyl-acyl-carrier protein synthase | 1604 | 935.5 | ||||||
CA_P0089 | Predicted membrane protein | 110 | 40 | ||||||
CA_P0090 | ABC-type transporter, ATPase component | 133 | 72 | ||||||
CA_P0091 | Predicted regulator of stationary/sporulation gene expression | 554 | 199 | ||||||
CA_P0093 | tnpa TnpA, transposase (3' segment) | 54 | 75 | ||||||
CA_P0094 | TnpA, transposase (5' segment) | 27 | 56 | ||||||
CA_P0096 | ipyr Inorganic pyrophosphatase | 155 | 138.5 | ||||||
CA_P0097 | lipg Carboxyl esterase, a/b hydrolase | 462.5 | 400 | ||||||
CA_P0098 | amyA alpha-amylase | 47 | 48.5 | ||||||
CA_P0099 | muts DNA mismatch repair protein, MUTS fragment | 24.5 | 4 | ||||||
CA_P0100 | HTH transcriptional regulator TetR/AcrR family | 163.5 | 75 | ||||||
CA_P0101 | hypothetical protein | 205 | 73.5 | ||||||
CA_P0102 | Membrane protein | 1998 | 154 | ||||||
CA_P0103 | arsr Transcriptional regulator HTH-type, ArsR family | 141 | 36 | ||||||
CA_P0104 | arsb Heavy metal resistance membrane protein | 141 | 44 | ||||||
CA_P0105 | arsc Arsenate reductase, arsC, protein-tyrosine-phosphatase family enzyme | 141 | 54 | ||||||
CA_P0106 | dxs 1-deoxyxylulose-5-phosphate synthase, dehydrogenase | 18.5 | 28 | ||||||
CA_P0107 | HTH transcriptional regulator MerR family | 51.5 | 38 | ||||||
CA_P0108 | Predicted HTH containing transcriptional regulator | 114.5 | 76 | ||||||
CA_P0110 | NH2-acetyltransferase | 56 | 42 | ||||||
CA_P0112 | hypothetical protein | 4686.5 | 784.5 | ||||||
CA_P0113 | Solo B3/4 domain (OB-fold DNA/RNA-binding) of Phe-aaRS-beta | 658 | 591.5 | ||||||
CA_P0114 | Possible beta-xylosidase, family 43 of glycosyl hydrolases | 19 | 16 | ||||||
CA_P0115 | xynD Endo-1,4-beta-xylanase XynD B.subtilis ortholog (family 43 glycosyl hydrolase and cellulose-binding domain) | 9 | 4 | ||||||
CA_P0116 | Xylanase, glycosyl hydrolase family 10 | 224.5 | 53 | ||||||
CA_P0117 | Possible beta-xylosidase diverged, family 5/39 of glycosyl hydrolases and alpha-amylase C (Greek key) C-terminal domain | 339.5 | 45 | ||||||
CA_P0118 | Possible xylan degradation enzyme (glycosyl hydrolase family 30-like domain and Ricin B-like domain) | 262.5 | 27.5 | ||||||
CA_P0119 | Possible xylan degradation enzyme (glycosyl hydrolase family 30-like domain and Ricin B-like domain) | 224 | 17 | ||||||
CA_P0120 | Possible xylan degradation enzyme (glycosyl hydrolase family 43-like domain, cellulose-binding domain and Ricin B-like domain) | 199.5 | 15 | ||||||
CA_P0123 | hypothetical protein | 102 | 79.5 | ||||||
CA_P0124 | Permease, MDR related, probably tetracycline resistance protein | 1062.5 | 421 |