Selected Cell
Cell:
Value:
Read me_data
Transcriptome_data
Read me_amounts
1. Array
2. Array
3. Array
4. Array
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Description: | This data-sheet reflects the transcriptome of C. acetobutylicum concerning the comparison of acidogenesis to solventogenesis. Genes with average fold regulation > 1.0 (significant > 3.0) showed elevated transcript level in the acidogenesis (pH 5.7) or repressed transcript level in the solventogenesis (pH 4.5), respectively. Genes were figured out as significant induced, if the average fold regulation was > 3.0 and at least three out of four micro arrays were > 2.0.Furthermore, genes with fold regulation < 1.0 (significant < 0.33) showed elevated transcript level in the solventogenesis (pH 4.5) or repressed transcript level in the acidogenesis (pH 5.7), respectively. Genes were figured out as significant induced, if the average fold regulation was < 0.33 and at least three out of four micro arrays were < 0.5. | ||||||||
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CAC2917 | acetyl esterase family enzyme | 0.9535 | 1.2878300064391501 | 1.2685 | 1.8552875695732838 | 1.3412793940031085 | 0.37538022510019525 | ||
CAC2918 | pmi Mannose-6 phospate isomelase | 1.496 | 1.713796058269066 | 3.0065 | 1.8570102135561746 | 2.01832656795631 | 0.675295879082482 | ||
CAC2920 | tenI Thiamine monophosphate synthase | 0.184 | 0.16440608302507195 | 0.519 | 0.3568242640499554 | 0.30605758676875683 | 0.16621765838359726 | ||
CAC2921 | thiH thiamine biosynthesis protein ThiH | 0.148 | 0.13329778725673153 | 0.558 | 0.32599837000814996 | 0.29132403931622036 | 0.19818548029681418 | ||
CAC2922 | thiG thiazole synthase | 0.153 | 0.14172335600907032 | 0.39 | 0.24154589371980673 | 0.23156731243221926 | 0.11466654214583795 | ||
CAC2923 | thiamine biosynthesis protein ThiF | 0.154 | 0.14492753623188406 | 0.374 | 0.24026910139356078 | 0.2282991594063612 | 0.10621237702532411 | ||
CAC2924 | thiS Uncharacterized protein, possibly involved in thiamine biosynthesis | 0.1465 | 0.1514348451578708 | 0.35150000000000003 | 0.21447721179624665 | 0.2159780142385294 | 0.09550126730434312 | ||
CAC2925 | HD superfamily hydrolase | 1.075 | 0.9587727708533078 | 1.1405 | 1.0580909236177691 | 0.09203604783675207 | |||
CAC2926 | sul Dihydropteroate synthase | 1.4140000000000001 | 1.1661807580174925 | 0.89 | 0.6811989100817439 | 1.0378449170248092 | 0.3199047922376686 | ||
CAC2927 | folA/folK Dihydroneopterin aldolase fused to 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase | 1.2029999999999998 | 1.044932079414838 | 0.843 | 0.6763611768684478 | 0.9418233140708214 | 0.23027582913809225 | ||
CAC2928 | Predicted membrane protein | 0.2175 | 0.14885382554331647 | 0.1015 | 0.06418485237483953 | 0.133009669479539 | 0.06612958982945333 | ||
CAC2936 | Alpha/beta superfamily hydrolase | 0.4385 | 0.36737692872887584 | 1.5510000000000002 | 1.3324450366422387 | 0.9223304913427786 | 0.6070378056300266 | ||
CAC2938 | hypothetical protein | 2.393 | 1.921229586935639 | 6.473000000000001 | 5.221932114882507 | 4.002290425454537 | 2.199436408068967 | ||
CAC2939 | Response regulator (CheY-like receiver domain and HTH-type DNA-binding domain) | 1.2054999999999998 | 1 | 2.449 | 2.1208907741251326 | 1.693847693531283 | 0.7006018579869062 | ||
CAC2940 | Membrane-associated sensory histidine kinase-like ATPase | 1.416 | 1.0799136069114472 | 1.9565000000000001 | 1.3879250520471893 | 1.460084664739659 | 0.364284085873007 | ||
CAC2941 | HAD superfamily hydrolase | 1.1995 | 1.1261261261261262 | 2.2430000000000003 | 1.1737089201877935 | 1.43558376157848 | 0.5391347961443899 | ||
CAC2942 | S-ribosylhomocysteinase | 1.1625 | 0.7331378299120235 | 1.1175 | 0.40858018386108275 | 0.8554295034432766 | 0.35477824193300633 | ||
CAC2944 | N-terminal domain intergin-like repeats and c-terminal- cell wall-associated hydrolase domain | 0.4515 | 0.5889281507656066 | 0.251 | 0.3127932436659368 | 0.40105534860788583 | 0.15071790366916576 | ||
CAC2945 | glycerate dehydrogenase | 0.7185 | 0.7722007722007722 | 1.516 | 1.4684287812041115 | 1.118782388351221 | 0.4321956494137861 | ||
CAC2946 | hypothetical protein | 0.8045 | 0.7119971520113919 | 1.77 | 1.098901098901099 | 1.0963495627281228 | 0.4784399526453285 | ||
CAC2947 | topB DNA topoisomerase III | 0.88 | 0.8703220191470844 | 2.185 | 1.6488046166529264 | 1.3960316589500028 | 0.6400584634092611 | ||
CAC2948 | ATPase components of ABC transporter with duplicated ATPase domains (second domain is inactivated) | 1.6495000000000002 | 1.4858841010401187 | 2.2880000000000003 | 1.679261125104954 | 1.7756613065362683 | 0.3519807929855503 | ||
CAC2950 | lacR Lactose phosphotransferase system repressor lacR | 0.9505 | 0.8684324793747287 | 2.2695 | 1.9841269841269842 | 1.5181398658754282 | 0.7132135610350115 | ||
CAC2959 | galK galactokinase | 0.853 | 0.7619047619047619 | 4.489 | 1.8726591760299625 | 1.994140984483681 | 1.7377848151974198 | ||
CAC2960 | GalE UDP-galactose 4-epimerase | 0.5820000000000001 | 0.7222824124232574 | 4.326 | 1.6611295681063123 | 1.8228529951323924 | 1.7361711856727038 | ||
CAC2961 | galT galactose-1-phosphate uridylyltransferase | 0.634 | 0.6506180871828238 | 4.391 | 1.6286644951140066 | 1.8260706455742075 | 1.772056519273881 | ||
CAC2962 | Transcriptional regulators of the LacI family | 0.6765 | 0.6611570247933884 | 2.0195 | 1.0526315789473684 | 1.1024471509351892 | 0.6376089371002708 | ||
CAC2963 | lacG 6-Phospho-Beta-D-Galactosidase | 1.448 | 1.016260162601626 | 1.785 | 1.1890606420927468 | 1.3595802011735931 | 0.33453730981371266 | ||
CAC2967 | Alpha-acetolactate decarboxylase | 0.636 | 0.6129328838492185 | 0.731 | 0.728066982162359 | 0.6769999665028944 | 0.06139878402445255 | ||
CAC2969 | 3-methyladenine DNA glycosylase | 0.8705 | 0.8550662676357418 | 1.69 | 1.1983223487118035 | 1.1534721540868862 | 0.3911491541834676 | ||
CAC2970 | PatB PLP-dependent aminotransferase, | 0.9169999999999999 | 0.8431703204047218 | 1.463 | 1.2682308180088777 | 1.1228502846033999 | 0.2929348906174229 | ||
CAC2971 | thiI Thiamine biosynthesis enzyme, THII | 1.2385000000000002 | 1.091703056768559 | 1.887 | 1.6597510373443982 | 1.4692385235282392 | 0.36814533545230016 | ||
CAC2972 | nifS Possible cysteine desulphurase from NifS family | 1.4615 | 1.2658227848101264 | 1.6103059581320451 | 1.4458762476473905 | 0.17277222115741683 | |||
CAC2973 | kdgA keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase | 0.704 | 0.7855459544383347 | 1.1425 | 1.0341261633919339 | 0.9165430294575672 | 0.205926458521107 | ||
CAC2974 | Predicted protease from collagenase family | 1.542 | 1.081081081081081 | 1.441 | 0.9699321047526674 | 1.258503296458437 | 0.2759392462809936 | ||
CAC2976 | aspartyl/glutamyl-tRNA amidotransferase subunit B | 0.8035 | 0.9945300845350571 | 1.3944999999999999 | 0.9620009620009621 | 1.0386327616340048 | 0.2514931316346209 | ||
CAC2977 | gatA Glutamyl-tRNAGln amidotransferase subunit A | 0.913 | 0.8791208791208791 | 1.5895000000000001 | 0.9560229445506694 | 1.0844109559178872 | 0.3381933152082384 | ||
CAC2978 | gatC Glu-tRNA amidotransferase, subunit C | 1.026 | 0.9385265133740027 | 1.6840000000000002 | 0.7867820613690009 | 1.1088271436857509 | 0.3959795828494249 | ||
CAC2979 | aspS asparaginyl-tRNA synthetase | 1.2935 | 1.1098779134295227 | 1.482 | 0.64 | 1.1313444783573807 | 0.36107890083273847 | ||
CAC2981 | Mannose-1-phosphate guanyltransferase (pyrophosphorylase domain and phosphomannomutase domain) | 1.1115 | 0.9242144177449167 | 0.9994999999999999 | 0.8090614886731392 | 0.9610689766045138 | 0.12724120304233305 | ||
CAC2982 | MinD family ATPase (chromosome partitioning) | 0.8905000000000001 | 1.25 | 1.125 | 1.097694840834248 | 1.0907987102085621 | 0.14908823877542482 | ||
CAC2983 | hypothetical protein | 0.7989999999999999 | 0.6942034015966678 | 1.4935 | 0.7713073659853452 | 0.9395026918955033 | 0.3719836167073527 | ||
CAC2984 | hypothetical protein | 1.9765000000000001 | 1.774622892635315 | 2.339 | 2.109704641350211 | 2.0499568834963817 | 0.23686876677685348 | ||
CAC2985 | hypothetical protein | 2.227 | 1.4114326040931544 | 3.2960000000000003 | 1.7777777777777777 | 2.178052595467733 | 0.8165227877127839 | ||
CAC2986 | ksgA Dimethyladenosine transferase | 1.17 | 1.1337868480725624 | 2.31 | 2.237136465324385 | 1.7127308283492368 | 0.648450620025649 | ||
CAC2987 | Primase-like protein, containing TOPRIM domain, YABF B,subtilis ortholog | 1.137 | 0.9718172983479106 | 2.298 | 2.0242914979757085 | 1.6077771990809047 | 0.6521676273799587 | ||
CAC2988 | Uncharacterized conserved protein, YABE B,subtilis ortholog | 1.499 | 1.1534025374855825 | 2.7125 | 0.8718395815170008 | 1.5591855297506458 | 0.8105267535462582 | ||
CAC2989 | PHP superfamily hydrolase, YABD ortholog | 0.8380000000000001 | 0.8298755186721991 | 1.2365 | 0.8673026886383347 | 0.9429195518276335 | 0.19637927193353358 | ||
CAC2990 | csp Cold shock protein | 1.024 | 0.8888888888888888 | 1.033 | 1.1389521640091116 | 1.0212102632245001 | 0.10250021435904375 | ||
CAC2991 | metG methionine--tRNA ligase | 1.2534999999999998 | 1.3289036544850499 | 0.28600000000000003 | 0.4133939644481191 | 0.8204494047332922 | 0.546927429627551 | ||
CAC2993 | Uncharacterized protein, YceG B,subtilis homolog | 0.952 | 0.7923930269413629 | 1.9395 | 0.9694619486185169 | 1.16333874388997 | 0.5235390137715092 | ||
CAC2994 | Toxic anion resistance protein, TELA family, YCEH B,subtilis ortholog | 0.9345 | 0.7852375343541422 | 1.6065 | 1.0090817356205852 | 1.0838298174936818 | 0.3606605705129016 | ||
CAC2995 | PTS system (Glucose-specific) component IIA | 0.889 | 1.3333333333333333 | 0.615 | 0.9136592051164916 | 0.9377481346124563 | 0.29642911743805417 | ||
CAC2996 | Superfamily II DNA/RNA helicase, SNF2 family | 1.621 | 1.4792899408284026 | 2.2865 | 1.5936254980079683 | 1.7451038597090929 | 0.3661121332101003 | ||
CAC2997 | Uracil-DNA glycosylase | 1.4755 | 1.2626262626262625 | 2.5555000000000003 | 1.4587892049598834 | 1.6881038668965365 | 0.5862857272288822 | ||
CAC2998 | TPR-repeat-containing protein | 0.8415 | 0.8143322475570033 | 1.9729999999999999 | 1.063264221158958 | 1.1730241171789904 | 0.544847607279261 | ||
CAC2999 | hypothetical protein | 1.6535 | 1.3966480446927374 | 1.405 | 1.6515276630883569 | 1.5266689269452738 | 0.14535540660647497 | ||
CAC3000 | hypothetical protein | 2.0380000000000003 | 1.7777777777777777 | 1.515 | 1.1142061281337048 | 1.6112459764778706 | 0.394192734698265 | ||
CAC3001 | Uncharacterized consrved protein, containing Zn finger | 2.2030000000000003 | 1.6501650165016502 | 2.383 | 0.9157509157509157 | 1.7879789830631416 | 0.6598148593563975 | ||
CAC3003 | thyA thymidylate synthase | 1.0659999999999998 | 1.0615711252653928 | 2.1929999999999996 | 1.3377926421404682 | 1.414590941851465 | 0.5347763633175849 | ||
CAC3004 | folA Dihydrofolate reductase | 1.0075 | 1.0834236186348862 | 2.568 | 1.510574018126888 | 1.5423744091904439 | 0.7187131043640062 | ||
CAC3006 | Zn-dependent peptidase, insulinase family | 1.8519999999999999 | 1.483679525222552 | 1.725 | 0.9610764055742431 | 1.5054389826991987 | 0.3937493569918693 | ||
CAC3008 | CBS domain containing protein | 0.6739999999999999 | 0.6232471174820816 | 0.582 | 0.8741258741258741 | 0.6883432479019889 | 0.1294440748444562 | ||
CAC3009 | Xylanase/chitin deacetylase family protein | 1.043 | 0.9009009009009008 | 1.6055 | 1.4144271570014142 | 1.2409570144755788 | 0.32547842662896 | ||
CAC3010 | ATP-dependent RNA helicase (superfamily II), YDBR B,subtilis ortholog | 0.9989999999999999 | 0.903750564844103 | 2.3565 | 1.1135857461024499 | 1.3432090777366381 | 0.6809525292613149 | ||
CAC3012 | ATPase component of ABC transporter, with duplicated ATPase domains | 1.5255 | 1.366120218579235 | 2.5115 | 1.8814675446848539 | 1.8211469408160221 | 0.5081608515484066 | ||
CAC3014 | thiC thiamine biosynthesis protein ThiC | 0.1815 | 0.19527436047646943 | 0.629 | 0.3894080996884735 | 0.3487956150412357 | 0.20953955050260936 | ||
CAC3015 | Glycosyltransferase | 1.0465 | 0.8857395925597874 | 1.3335 | 1.1926058437686344 | 1.1145863590821055 | 0.1923684113114363 | ||
CAC3016 | hypothetical protein | 0.7455 | 0.8216926869350862 | 0.9065000000000001 | 0.741839762611276 | 0.8038831123865906 | 0.07768605973692816 | ||
CAC3017 | Predicted xylanase/chitin deacetylase | 0.4185 | 0.43094160741219567 | 0.541 | 0.41407867494824013 | 0.45113007059010896 | 0.06033712423638394 | ||
CAC3018 | Rubrerythrin | 0.353 | 0.5482456140350878 | 0.538 | 0.531632110579479 | 0.4927194311536417 | 0.09339736427835058 | ||
CAC3019 | Sensory transduction protein with GGDEF and EAL domains | 1.533 | 1.813236627379873 | 0.371 | 2.9806259314456036 | 1.674465639706369 | 1.071501640354767 | ||
CAC3020 | argJ bifunctional ornithine acetyltransferase/N-acetylglutamate synthase protein | 1.626 | 1.8484288354898335 | 0.484 | 6.024096385542169 | 2.4956313052580006 | 2.427059673420874 | ||
CAC3021 | Possible phosphoglycerate mutase | 0.9165000000000001 | 0.831946755407654 | 1.6320000000000001 | 1.3253810470510272 | 1.1764569506146705 | 0.37236306078750797 | ||
CAC3022 | Alpha/beta superfamily hydrolase | 0.7875 | 0.7686395080707149 | 0.9065000000000001 | 0.8932559178204557 | 0.8389738564727925 | 0.07095256798062494 | ||
CAC3023 | hypothetical protein | 0.4785 | 0.44923629829290207 | 0.4635 | 0.449842555105713 | 0.4602697133496538 | 0.013823168716035323 | ||
CAC3024 | acyl-CoA thioesterase family protein | 0.8089999999999999 | 0.7791195948578106 | 0.502 | 0.5817335660267597 | 0.6679632902211425 | 0.14969575433902843 | ||
CAC3026 | Protein from GDSL (phospholipase B) family of lipolitic enzyme | 1.1895 | 1.1500862564692353 | 1.0575 | 0.7621951219512195 | 1.0398203446051137 | 0.1931760035363816 | ||
CAC3027 | Predicted phosphohydrolase | 0.9215 | 0.8136696501220504 | 1.117 | 0.7627765064836003 | 0.9037365391514127 | 0.15682115034179767 | ||
CAC3030 | hypothetical protein | 1.0475 | 1.1129660545353368 | 2.0895 | 1.7137960582690663 | 1.4909405282011008 | 0.4991466829687887 | ||
CAC3031 | hisC histidinol-phosphate aminotransferase | 1.22 | 1.2277470841006752 | 3.1305 | 1.8535681186283597 | 1.857953800682259 | 0.8988026518716599 | ||
CAC3032 | Galactose mutarotase related enzyme | 1.4655 | 1.1778563015312131 | 2.7155 | 1.4440433212996393 | 1.7007249057077132 | 0.6890515852166759 | ||
CAC3033 | Uncharacterized protein containing conserved domain, related to YABE B,subtilis C-terminal domain | 1.1375 | 1.0325245224574084 | 1.45 | 0.6896551724137931 | 1.0774199237178004 | 0.31347654256563595 | ||
CAC3034 | MutS-like mismatch repair protein, ATPase | 0.803 | 0.8206811653672548 | 1.1365 | 0.7130124777183602 | 0.8682984107714038 | 0.18491177894521169 | ||
CAC3035 | HAD superfamily hydrolase | 0.983 | 1.0400416016640666 | 1.0309278350515465 | 1.0179898122385378 | 0.030642787174683755 | |||
CAC3037 | ccpA Catabolite control protein, LacI family transcriptional regulator | 1.7995 | 1.4771048744460855 | 5.615 | 2.936857562408223 | 2.9571156092135773 | 1.8792964549682247 | ||
CAC3038 | ileS isoleucyl-tRNA synthetase | 0.9225 | 1.0598834128245893 | 1.83 | 1.4064697609001404 | 1.3047132934311825 | 0.4050963568021095 | ||
CAC3040 | CPSC/CAPB subfamily ATPase | 1.647 | 1.4326647564469914 | 3.4015 | 2.098635886673662 | 2.1449501607801635 | 0.8824902965050034 | ||
CAC3041 | O-actetyl transferase related protein | 1.069 | 1.1641443538998837 | 1.065 | 0.7127583749109052 | 1.0027256822026973 | 0.19866840272772152 | ||
CAC3042 | O-actetyl transferase related protein | 1.363 | 1.277139208173691 | 1.686 | 0.7485029940119762 | 1.2686605505464168 | 0.3888906954610191 | ||
CAC3043 | CPSC/CAPB subfamily ATPase | 1.4420000000000002 | 1.3333333333333333 | 1.562 | 0.9337068160597571 | 1.3177600373482727 | 0.27253631684954216 | ||
CAC3044 | CPSD/CAPA conserved membrane protein of Rol/Cld family | 1.475 | 1.2987012987012987 | 1.9465 | 0.8845643520566121 | 1.4011914126894778 | 0.43977907567278857 | ||
CAC3045 | CPSB/CAPC ortholog, PHP family hydrolase | 1.236 | 0.9216589861751152 | 0.7375 | 0.6811989100817439 | 0.8940894740642148 | 0.2500036942155055 | ||
CAC3046 | Transcriptional regulator, LytR family | 1.116 | 1.075268817204301 | 0.7795000000000001 | 0.9902562724014338 | 0.18365296643505294 | |||
CAC3047 | Uncharacterized membrane protein, putative virulence factor MviN | 1.203 | 1.2195121951219512 | 0.5305 | 0.5353319057815846 | 0.872086025225884 | 0.3917028430761342 | ||
CAC3048 | Uncharacterized conserved membrane protein, possible transporter | 1.1695 | 0.9905894006934125 | 0.8285 | 0.5448106782892944 | 0.8833500197456767 | 0.2652040135476999 | ||
CAC3049 | Glycosyltransferase | 0.6014999999999999 | 0.4239983040067839 | 0.718 | 0.5811661013355945 | 0.1480518486473326 | |||
CAC3054 | Phosphoheptose isomerase | 2.163 | 2.061855670103093 | 0.878 | 1.7009518900343643 | 0.7144892608366641 | |||
CAC3057 | Glycosyltransferase | 1.447 | 2.372479240806643 | 0.771 | 1.5301597469355477 | 0.80397176400446 | |||
CAC3060 | CPSC/CAPB subfamily ATPase | 1.154 | 1.0346611484738748 | 2.638 | 2.288329519450801 | 1.778747666981169 | 0.8045625375708638 |
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Description: | The single sheets contain the transcript amount of the genes for all four microarrays (sheet 1 to 4). The first biological experiment will be represented by the 1. and 2. array. The 3. and 4. array showed the transcript level of the second biological experiment. The 1. and 3. array the cDNA of pH 4.5 was labeled by Cy3 and pH 5.7 by Cy5, respectively. The 2. and 4. array contained the transcript level of the dyeflip (pH 4.5 Cy5 / pH 5.7 Cy3). Furthermore, the 1. and 2. array were evaluated under high scanning conditions and the 3. and 4. array under low scanning conditions. | ||||||||
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1. Array (high Scan) | pH 4.5 / Cy3 | ||||||||
ORF | Name | (F 635 median - B635) - B635 SD | (F 532 median - B532) - B532 SD | pH 5.7 / Cy5 | |||||
CA_P0002 | Transglutaminase-like predicted protease domain fused ChW-repeats and cell-adhesion domain | 373.5 | 279 | ||||||
CA_P0003 | Transglutaminase-like predicted protease domain fused to ChW-repeats and cell-adhesion domain | 266 | 109 | ||||||
CA_P0004 | Cysteine protease | 415.5 | 20426.5 | ||||||
CA_P0005 | Uncharacterized protein similar to Bacteriocin immunity protein of mesC/lccI/entI family | 340.5 | 101.5 | ||||||
CA_P0006 | GntR family HTH transcriptional regulator | 1748.5 | 1721 | ||||||
CA_P0007 | hypothetical protein | 1246 | 1028 | ||||||
CA_P0009 | Response regulator (CheY + HTH domains) | 445 | 1880 | ||||||
CA_P0010 | bgla Beta_glucosidase | 660 | 2242.5 | ||||||
CA_P0012 | pedb Pediocin immunity protein, PedB | 3038 | 3942 | ||||||
CA_P0013 | FAD dependent dehydrogenase | 1007.5 | 603 | ||||||
CA_P0014 | Protein tyrosine phosphatase II superfamily protein | 1855 | 1464.5 | ||||||
CA_P0015 | GLPQ related phosphodiesterase | 3905.5 | 3969 | ||||||
CA_P0018 | hypothetical protein | 63 | 32 | ||||||
CA_P0019 | grkc Spore germination protein, GRKC | 129 | 127.5 | ||||||
CA_P0020 | grka Spore germination protein, GRKA | 168 | 213.5 | ||||||
CA_P0024 | MarR family HTH transcriptional regulator | 95 | 81 | ||||||
CA_P0025 | pdc Pyruvate decarboxylase | 5988 | 5220.5 | ||||||
CA_P0026 | hypothetical protein | 5853.5 | 5351 | ||||||
CA_P0027 | Predicted amino acid permeases | 235.5 | 219.5 | ||||||
CA_P0028 | HTH transcriptional regulator TetR family | 657 | 496 | ||||||
CA_P0031 | hlyU Transcriptional activator HLYU, HTH of ArsR family | 458.5 | 346 | ||||||
CA_P0032 | Rhodanese-like domain | 257.5 | 247 | ||||||
CA_P0033 | hypothetical protein | 411.5 | 417.5 | ||||||
CA_P0034 | Rhodanese-like domain | 2115 | 2481 | ||||||
CA_P0035 | adhe Aldehyde-alcohol dehydrogenase, ADHE1 | 2648.5 | 850.5 | ||||||
CA_P0036 | Uncharacterized, ortholog of YgaT gene of B,subtillis | 46107.5 | 445 | ||||||
CA_P0037 | Uncharacterized, ortholog of YgaS gene of B,subtillis | 46444.5 | 354.5 | ||||||
CA_P0038 | Uncharacterized conserved protein, YCII family | 988.5 | 178.5 | ||||||
CA_P0040 | Xre family DNA-binding domain and TPR repeats containing protein | 403 | 1927.5 | ||||||
CA_P0044 | hypothetical protein | 208 | 1194.5 | ||||||
CA_P0045 | Glycosyl transferase | 356.5 | 1915 | ||||||
CA_P0046 | TetR family HTH transcriptional regulator | 78 | 135 | ||||||
CA_P0047 | Sulphohydrolase/Glycosulfatase, Zn-dependent hydrolase | 107 | 70 | ||||||
CA_P0048 | Related to methyl-accepting chemotaxis protein | 1133.5 | 688.5 | ||||||
CA_P0049 | Permease, MDR related | 166 | 147 | ||||||
CA_P0050 | pnba Para-nitrobenzyl esterase, a/b hydrolase | 1928.5 | 1907 | ||||||
CA_P0052 | MarR family HTH transcriptional regulator | 473.5 | 317 | ||||||
CA_P0053 | xynb Xylanase, glycosyl hydrolase family 10 | 311.5 | 5611 | ||||||
CA_P0054 | Xylanase/chitin deacetylase family enzyme | 439 | 7819.5 | ||||||
CA_P0055 | hypothetical protein | 294.5 | 241 | ||||||
CA_P0056 | pell Pectate lyase, secreted, polysaccharide lyase family | 434 | 4597 | ||||||
CA_P0057 | Putative glycoportein or S-layer protein | 684.5 | 1091.5 | ||||||
CA_P0058 | Rare lipoprotein A RLPA releated protein | 11422 | 9077.5 | ||||||
CA_P0059 | Alcohol dehydrogenase | 1053 | 982 | ||||||
CA_P0062 | Hypothetical protein, CF-18 family | 138.5 | 69 | ||||||
CA_P0064 | alf Fructose-bisphosphate aldolase class I | 85.5 | 76 | ||||||
CA_P0065 | Predicted secreted metalloprotease | 310 | 4875 | ||||||
CA_P0066 | ptna Mannose-specific phosphotransferase system component IIAB | 104.5 | 15 | ||||||
CA_P0067 | manY/levF Mannose/fructose-specific phosphotransferase system component IIC | 204 | 52 | ||||||
CA_P0072 | hypothetical protein | 5976.5 | 2992.5 | ||||||
CA_P0073 | ABC ATPase containing transporter | 2071.5 | 725 | ||||||
CA_P0074 | hypothetical protein | 1774 | 546 | ||||||
CA_P0076 | penicillin binding protein 1A | 928 | 564.5 | ||||||
CA_P0077 | Uncharacterized Fe-S protein | 142.5 | 71.5 | ||||||
CA_P0079 | thlr ThlR, HTH transcriptional regulator TetR/AcrR family | 2049.5 | 1822.5 | ||||||
CA_P0080 | Site-Specific Recombinase, Xerd | 292.5 | 297.5 | ||||||
CA_P0081 | TnpR resolvase C-terminal fragment | 224 | 161.5 | ||||||
CA_P0082 | crp CRP (cyclic AMP receptor protein) regulatory protein | 722.5 | 711.5 | ||||||
CA_P0083 | SAM-dependent methyltransferase | 1307.5 | 605 | ||||||
CA_P0084 | hypothetical protein | 1124 | 831 | ||||||
CA_P0085 | Hypothetical secreted protein (fragment) | 631.5 | 489 | ||||||
CA_P0086 | Permease, MDR related, probably tetracycline resistance protein | 635.5 | 606.5 | ||||||
CA_P0087 | HTH transcriptional regulator TetR/AcrR family | 3898.5 | 2437.5 | ||||||
CA_P0088 | abf 3-oxoacyl-acyl-carrier protein synthase | 1694 | 1179.5 | ||||||
CA_P0089 | Predicted membrane protein | 158 | 86 | ||||||
CA_P0090 | ABC-type transporter, ATPase component | 330 | 239 | ||||||
CA_P0091 | Predicted regulator of stationary/sporulation gene expression | 1641.5 | 1946 | ||||||
CA_P0093 | tnpa TnpA, transposase (3' segment) | 427.5 | 420.5 | ||||||
CA_P0094 | TnpA, transposase (5' segment) | 589.5 | 522.5 | ||||||
CA_P0096 | ipyr Inorganic pyrophosphatase | 820.5 | 1010.5 | ||||||
CA_P0097 | lipg Carboxyl esterase, a/b hydrolase | 2128 | 2506 | ||||||
CA_P0098 | amyA alpha-amylase | 295.5 | 261.5 | ||||||
CA_P0099 | muts DNA mismatch repair protein, MUTS fragment | 234 | 182.5 | ||||||
CA_P0100 | HTH transcriptional regulator TetR/AcrR family | 638 | 838 | ||||||
CA_P0101 | hypothetical protein | 742 | 1077.5 | ||||||
CA_P0102 | Membrane protein | 891.5 | 8260.5 | ||||||
CA_P0103 | arsr Transcriptional regulator HTH-type, ArsR family | 426 | 516 | ||||||
CA_P0104 | arsb Heavy metal resistance membrane protein | 212 | 334 | ||||||
CA_P0105 | arsc Arsenate reductase, arsC, protein-tyrosine-phosphatase family enzyme | 259 | 556 | ||||||
CA_P0107 | HTH transcriptional regulator MerR family | 301.5 | 233.5 | ||||||
CA_P0108 | Predicted HTH containing transcriptional regulator | 861 | 780 | ||||||
CA_P0110 | NH2-acetyltransferase | 372.5 | 235 | ||||||
CA_P0111 | NH2-acetyltransferase | 167 | 37 | ||||||
CA_P0112 | hypothetical protein | 3320.5 | 12481.5 | ||||||
CA_P0113 | Solo B3/4 domain (OB-fold DNA/RNA-binding) of Phe-aaRS-beta | 3682 | 3518.5 | ||||||
CA_P0114 | Possible beta-xylosidase, family 43 of glycosyl hydrolases | 97 | 252.5 | ||||||
CA_P0115 | xynD Endo-1,4-beta-xylanase XynD B,subtilis ortholog (family 43 glycosyl hydrolase and cellulose-binding domain) | 3 | 99 | ||||||
CA_P0116 | Xylanase, glycosyl hydrolase family 10 | 253.5 | 1616 | ||||||
CA_P0117 | Possible beta-xylosidase diverged, family 5/39 of glycosyl hydrolases and alpha-amylase C (Greek key) C-terminal domain | 181.5 | 1570.5 | ||||||
CA_P0118 | Possible xylan degradation enzyme (glycosyl hydrolase family 30-like domain and Ricin B-like domain) | 194 | 1459 | ||||||
CA_P0119 | Possible xylan degradation enzyme (glycosyl hydrolase family 30-like domain and Ricin B-like domain) | 78 | 1033.5 | ||||||
CA_P0120 | Possible xylan degradation enzyme (glycosyl hydrolase family 43-like domain, cellulose-binding domain and Ricin B-like domain) | 96 | 1150.5 | ||||||
CA_P0121 | Leu-rich protein family protein, YaeG (E,coli) homolog | 23 | 67 | ||||||
CA_P0123 | hypothetical protein | 597.5 | 758.5 | ||||||
CA_P0124 | Permease, MDR related, probably tetracycline resistance protein | 1910 | 2061.5 | ||||||
CA_P0125 | hypothetical protein | 1040 | 703.5 | ||||||
CA_P0126 | Uncharacterized protein (NN,term domain homologous to B,subtilis (gi|833839) | 2070 | 1554 | ||||||
CA_P0127 | HTH transcriptional regulator TetR family | 393 | 205 |
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2. array (high scan) | pH 4.5 / Cy5 | ||||||||||
ORF | Name | (F 635 median - B635) - B635 SD | (F 532 median - B532) - B532 SD | pH 5.7 / Cy3 | |||||||
CA_P0001 | Oxidoreductase | 89 | 117 | ||||||||
CA_P0002 | Transglutaminase-like predicted protease domain fused ChW-repeats and cell-adhesion domain | 279 | 286 | ||||||||
CA_P0003 | Transglutaminase-like predicted protease domain fused to ChW-repeats and cell-adhesion domain | 155.5 | 237.5 | ||||||||
CA_P0004 | Cysteine protease | 16476 | 271 | ||||||||
CA_P0005 | Uncharacterized protein similar to Bacteriocin immunity protein of mesC/lccI/entI family | 162.5 | 229.5 | ||||||||
CA_P0006 | GntR family HTH transcriptional regulator | 1599 | 1544 | ||||||||
CA_P0007 | hypothetical protein | 957.5 | 1054 | ||||||||
CA_P0009 | Response regulator (CheY + HTH domains) | 3064 | 814.5 | ||||||||
CA_P0010 | bgla Beta_glucosidase | 2148.5 | 642.5 | ||||||||
CA_P0012 | pedb Pediocin immunity protein, PedB | 3817.5 | 2461.5 | ||||||||
CA_P0013 | FAD dependent dehydrogenase | 664 | 744.5 | ||||||||
CA_P0014 | Protein tyrosine phosphatase II superfamily protein | 1588 | 1583.5 | ||||||||
CA_P0015 | GLPQ related phosphodiesterase | 3664 | 3275 | ||||||||
CA_P0019 | grkc Spore germination protein, GRKC | 116 | 94 | ||||||||
CA_P0020 | grka Spore germination protein, GRKA | 201 | 85 | ||||||||
CA_P0021 | hypothetical protein | 19 | 32 | ||||||||
CA_P0023 | hypothetical protein | 44 | 49 | ||||||||
CA_P0024 | MarR family HTH transcriptional regulator | 106.5 | 118 | ||||||||
CA_P0025 | pdc Pyruvate decarboxylase | 5205.5 | 5797 | ||||||||
CA_P0026 | hypothetical protein | 5122 | 5912 | ||||||||
CA_P0027 | Predicted amino acid permeases | 206.5 | 114.5 | ||||||||
CA_P0028 | HTH transcriptional regulator TetR family | 468 | 431.5 | ||||||||
CA_P0031 | hlyU Transcriptional activator HLYU, HTH of ArsR family | 406.5 | 375 | ||||||||
CA_P0032 | Rhodanese-like domain | 228.5 | 167.5 | ||||||||
CA_P0033 | hypothetical protein | 399.5 | 297 | ||||||||
CA_P0034 | Rhodanese-like domain | 2499 | 1767.5 | ||||||||
CA_P0035 | adhe Aldehyde-alcohol dehydrogenase, ADHE1 | 814.5 | 2786.5 | ||||||||
CA_P0036 | Uncharacterized, ortholog of YgaT gene of B,subtillis | 3232.5 | 60284.5 | ||||||||
CA_P0037 | Uncharacterized, ortholog of YgaS gene of B,subtillis | 1103.5 | 61929.5 | ||||||||
CA_P0038 | Uncharacterized conserved protein, YCII family | 171.5 | 622 | ||||||||
CA_P0040 | Xre family DNA-binding domain and TPR repeats containing protein | 1605.5 | 255 | ||||||||
CA_P0044 | hypothetical protein | 1393 | 187 | ||||||||
CA_P0045 | Glycosyl transferase | 1757 | 261.5 | ||||||||
CA_P0046 | TetR family HTH transcriptional regulator | 157 | 7 | ||||||||
CA_P0047 | Sulphohydrolase/Glycosulfatase, Zn-dependent hydrolase | 107 | 76.5 | ||||||||
CA_P0048 | Related to methyl-accepting chemotaxis protein | 601 | 1031.5 | ||||||||
CA_P0049 | Permease, MDR related | 211.5 | 152.5 | ||||||||
CA_P0050 | pnba Para-nitrobenzyl esterase, a/b hydrolase | 2205 | 2468 | ||||||||
CA_P0051 | Oxidoreductase | 98.5 | 62.5 | ||||||||
CA_P0052 | MarR family HTH transcriptional regulator | 259.5 | 354 | ||||||||
CA_P0053 | xynb Xylanase, glycosyl hydrolase family 10 | 4608.5 | 241.5 | ||||||||
CA_P0054 | Xylanase/chitin deacetylase family enzyme | 6967 | 350 | ||||||||
CA_P0055 | hypothetical protein | 249 | 196 | ||||||||
CA_P0056 | pell Pectate lyase, secreted, polysaccharide lyase family | 4865 | 396 | ||||||||
CA_P0057 | Putative glycoportein or S-layer protein | 1320.5 | 688 | ||||||||
CA_P0058 | Rare lipoprotein A RLPA releated protein | 8917 | 10583 | ||||||||
CA_P0059 | Alcohol dehydrogenase | 837 | 775.5 | ||||||||
CA_P0062 | Hypothetical protein, CF-18 family | 151 | 123.5 | ||||||||
CA_P0064 | alf Fructose-bisphosphate aldolase class I | 124 | 32.5 | ||||||||
CA_P0065 | Predicted secreted metalloprotease | 4264.5 | 229.5 | ||||||||
CA_P0066 | ptna Mannose-specific phosphotransferase system component IIAB | 38 | 51 | ||||||||
CA_P0067 | manY/levF Mannose/fructose-specific phosphotransferase system component IIC | 69.5 | 159.5 | ||||||||
CA_P0072 | hypothetical protein | 2581 | 5461.5 | ||||||||
CA_P0073 | ABC ATPase containing transporter | 701 | 1729.5 | ||||||||
CA_P0074 | hypothetical protein | 599.5 | 1349 | ||||||||
CA_P0076 | penicillin binding protein 1A | 530.5 | 935.5 | ||||||||
CA_P0078 | thil Acetyl coenzyme A acetyltransferase (thiolase) | 259.5 | 283.5 | ||||||||
CA_P0079 | thlr ThlR, HTH transcriptional regulator TetR/AcrR family | 1417.5 | 1399.5 | ||||||||
CA_P0080 | Site-Specific Recombinase, Xerd | 300 | 254 | ||||||||
CA_P0081 | TnpR resolvase C-terminal fragment | 136 | 109 | ||||||||
CA_P0082 | crp CRP (cyclic AMP receptor protein) regulatory protein | 740.5 | 617.5 | ||||||||
CA_P0083 | SAM-dependent methyltransferase | 708.5 | 1280.5 | ||||||||
CA_P0084 | hypothetical protein | 887.5 | 1064 | ||||||||
CA_P0085 | Hypothetical secreted protein (fragment) | 474.5 | 507 | ||||||||
CA_P0086 | Permease, MDR related, probably tetracycline resistance protein | 605.5 | 584 | ||||||||
CA_P0087 | HTH transcriptional regulator TetR/AcrR family | 2460 | 3028.5 | ||||||||
CA_P0088 | abf 3-oxoacyl-acyl-carrier protein synthase | 1536.5 | 1659.5 | ||||||||
CA_P0089 | Predicted membrane protein | 134 | 123 | ||||||||
CA_P0090 | ABC-type transporter, ATPase component | 167.5 | 214.5 | ||||||||
CA_P0091 | Predicted regulator of stationary/sporulation gene expression | 2159 | 1306 | ||||||||
CA_P0093 | tnpa TnpA, transposase (3' segment) | 385.5 | 425.5 | ||||||||
CA_P0094 | TnpA, transposase (5' segment) | 464.5 | 407.5 | ||||||||
CA_P0096 | ipyr Inorganic pyrophosphatase | 959 | 746 | ||||||||
CA_P0097 | lipg Carboxyl esterase, a/b hydrolase | 2062.5 | 1594 | ||||||||
CA_P0098 | amyA alpha-amylase | 297 | 309 | ||||||||
CA_P0099 | muts DNA mismatch repair protein, MUTS fragment | 211 | 148 | ||||||||
CA_P0100 | HTH transcriptional regulator TetR/AcrR family | 942 | 583 | ||||||||
CA_P0101 | hypothetical protein | 1041.5 | 599.5 | ||||||||
CA_P0102 | Membrane protein | 8135.5 | 733 | ||||||||
CA_P0103 | arsr Transcriptional regulator HTH-type, ArsR family | 587 | 263.5 | ||||||||
CA_P0104 | arsb Heavy metal resistance membrane protein | 468.5 | 269 | ||||||||
CA_P0105 | arsc Arsenate reductase, arsC, protein-tyrosine-phosphatase family enzyme | 463 | 214 | ||||||||
CA_P0106 | dxs 1-deoxyxylulose-5-phosphate synthase, dehydrogenase | 107 | 109 | ||||||||
CA_P0108 | Predicted HTH containing transcriptional regulator | 782.5 | 600 | ||||||||
CA_P0110 | NH2-acetyltransferase | 226 | 274 | ||||||||
CA_P0111 | NH2-acetyltransferase | 52 | 152 | ||||||||
CA_P0112 | hypothetical protein | 11961.5 | 2907 | ||||||||
CA_P0113 | Solo B3/4 domain (OB-fold DNA/RNA-binding) of Phe-aaRS-beta | 3998.5 | 2880.5 | ||||||||
CA_P0114 | Possible beta-xylosidase, family 43 of glycosyl hydrolases | 293.5 | 65 | ||||||||
CA_P0116 | Xylanase, glycosyl hydrolase family 10 | 2110.5 | 306 | ||||||||
CA_P0117 | Possible beta-xylosidase diverged, family 5/39 of glycosyl hydrolases and alpha-amylase C (Greek key) C-terminal domain | 1687 | 154 | ||||||||
CA_P0118 | Possible xylan degradation enzyme (glycosyl hydrolase family 30-like domain and Ricin B-like domain) | 1520 | 203 | ||||||||
CA_P0119 | Possible xylan degradation enzyme (glycosyl hydrolase family 30-like domain and Ricin B-like domain) | 797.5 | 16 | ||||||||
CA_P0120 | Possible xylan degradation enzyme (glycosyl hydrolase family 43-like domain, cellulose-binding domain and Ricin B-like domain) | 1005 | 35 | ||||||||
CA_P0122 | dTDP-4-keto-L-rhamnose reductase | 11 | 20 | ||||||||
CA_P0123 | hypothetical protein | 833 | 555.5 | ||||||||
CA_P0124 | Permease, MDR related, probably tetracycline resistance protein | 2063.5 | 1624 | ||||||||
CA_P0125 | hypothetical protein | 693.5 | 846.5 |
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3. array (low scan) | pH 4.5 / Cy3 | ||||||||
ORF | Name | (F 635 median - B635) - B635 SD | (F 532 median - B532) - B532 SD | pH 5.7 / Cy5 | |||||
CA_P0002 | Transglutaminase-like predicted protease domain fused ChW-repeats and cell-adhesion domain | 106.5 | 14.5 | ||||||
CA_P0003 | Transglutaminase-like predicted protease domain fused to ChW-repeats and cell-adhesion domain | 64 | 10 | ||||||
CA_P0004 | Cysteine protease | 167.5 | 4352 | ||||||
CA_P0005 | Uncharacterized protein similar to Bacteriocin immunity protein of mesC/lccI/entI family | 50 | 62.5 | ||||||
CA_P0006 | GntR family HTH transcriptional regulator | 326.5 | 314 | ||||||
CA_P0007 | hypothetical protein | 523.5 | 311 | ||||||
CA_P0009 | Response regulator (CheY + HTH domains) | 197 | 376 | ||||||
CA_P0010 | bgla Beta_glucosidase | 181 | 522.5 | ||||||
CA_P0012 | pedb Pediocin immunity protein, PedB | 1352.5 | 1527.5 | ||||||
CA_P0013 | FAD dependent dehydrogenase | 232.5 | 107.5 | ||||||
CA_P0014 | Protein tyrosine phosphatase II superfamily protein | 534 | 238.5 | ||||||
CA_P0015 | GLPQ related phosphodiesterase | 725.5 | 1011.5 | ||||||
CA_P0018 | hypothetical protein | 9 | 7 | ||||||
CA_P0019 | grkc Spore germination protein, GRKC | 22.5 | 27.5 | ||||||
CA_P0020 | grka Spore germination protein, GRKA | 52 | 85.5 | ||||||
CA_P0025 | pdc Pyruvate decarboxylase | 1341 | 601.5 | ||||||
CA_P0026 | hypothetical protein | 1107 | 650 | ||||||
CA_P0027 | Predicted amino acid permeases | 20.5 | 54 | ||||||
CA_P0028 | HTH transcriptional regulator TetR family | 130 | 41 | ||||||
CA_P0031 | hlyU Transcriptional activator HLYU, HTH of ArsR family | 107 | 77.5 | ||||||
CA_P0032 | Rhodanese-like domain | 42.5 | 10.5 | ||||||
CA_P0033 | hypothetical protein | 105 | 71 | ||||||
CA_P0034 | Rhodanese-like domain | 519 | 591 | ||||||
CA_P0035 | adhe Aldehyde-alcohol dehydrogenase, ADHE1 | 324 | 81 | ||||||
CA_P0036 | Uncharacterized, ortholog of YgaT gene of B.subtillis | 36982.5 | 101.5 | ||||||
CA_P0037 | Uncharacterized, ortholog of YgaS gene of B.subtillis | 27184.5 | 32 | ||||||
CA_P0038 | Uncharacterized conserved protein, YCII family | 153.5 | 22 | ||||||
CA_P0044 | hypothetical protein | 76.5 | 268.5 | ||||||
CA_P0045 | Glycosyl transferase | 84 | 377 | ||||||
CA_P0046 | TetR family HTH transcriptional regulator | 10 | 25 | ||||||
CA_P0047 | Sulphohydrolase/Glycosulfatase, Zn-dependent hydrolase | 31 | 19 | ||||||
CA_P0048 | Related to methyl-accepting chemotaxis protein | 248 | 125.5 | ||||||
CA_P0049 | Permease, MDR related | 33.5 | 69.5 | ||||||
CA_P0050 | pnba Para-nitrobenzyl esterase, a/b hydrolase | 471 | 327.5 | ||||||
CA_P0051 | Oxidoreductase | 37 | 32.5 | ||||||
CA_P0052 | MarR family HTH transcriptional regulator | 28 | 42 | ||||||
CA_P0053 | xynb Xylanase, glycosyl hydrolase family 10 | 102.5 | 2182 | ||||||
CA_P0054 | Xylanase/chitin deacetylase family enzyme | 150 | 2618.5 | ||||||
CA_P0055 | hypothetical protein | 102 | 218.5 | ||||||
CA_P0056 | pell Pectate lyase, secreted, polysaccharide lyase family | 140 | 904 | ||||||
CA_P0057 | Putative glycoportein or S-layer protein | 554.5 | 373.5 | ||||||
CA_P0058 | Rare lipoprotein A RLPA releated protein | 2633.5 | 1793.5 | ||||||
CA_P0059 | Alcohol dehydrogenase | 181.5 | 176 | ||||||
CA_P0061 | hypothetical protein | 18 | 11 | ||||||
CA_P0062 | Hypothetical protein, CF-18 family | 42 | 7.5 | ||||||
CA_P0065 | Predicted secreted metalloprotease | 112.5 | 1834.5 | ||||||
CA_P0066 | ptna Mannose-specific phosphotransferase system component IIAB | 46 | 6 | ||||||
CA_P0067 | manY/levF Mannose/fructose-specific phosphotransferase system component IIC | 40.5 | 7 | ||||||
CA_P0070 | HAD phosphatase superfamily protein | 5 | 16 | ||||||
CA_P0072 | hypothetical protein | 2495 | 384.5 | ||||||
CA_P0073 | ABC ATPase containing transporter | 1289.5 | 145 | ||||||
CA_P0074 | hypothetical protein | 1090.5 | 105.5 | ||||||
CA_P0076 | penicillin binding protein 1A | 320 | 106 | ||||||
CA_P0077 | Uncharacterized Fe-S protein | 4 | 2 | ||||||
CA_P0078 | thil Acetyl coenzyme A acetyltransferase (thiolase) | 66.5 | 29.5 | ||||||
CA_P0079 | thlr ThlR, HTH transcriptional regulator TetR/AcrR family | 267 | 76.5 | ||||||
CA_P0080 | Site-Specific Recombinase, Xerd | 67 | 52.5 | ||||||
CA_P0082 | crp CRP (cyclic AMP receptor protein) regulatory protein | 122.5 | 188 | ||||||
CA_P0083 | SAM-dependent methyltransferase | 365 | 90.5 | ||||||
CA_P0084 | hypothetical protein | 260 | 168.5 | ||||||
CA_P0085 | Hypothetical secreted protein (fragment) | 138.5 | 105 | ||||||
CA_P0086 | Permease, MDR related, probably tetracycline resistance protein | 296.5 | 203.5 | ||||||
CA_P0087 | HTH transcriptional regulator TetR/AcrR family | 853.5 | 930 | ||||||
CA_P0088 | abf 3-oxoacyl-acyl-carrier protein synthase | 941.5 | 1379.5 | ||||||
CA_P0089 | Predicted membrane protein | 36.5 | 80.5 | ||||||
CA_P0090 | ABC-type transporter, ATPase component | 66 | 128.5 | ||||||
CA_P0091 | Predicted regulator of stationary/sporulation gene expression | 257.5 | 291.5 | ||||||
CA_P0093 | tnpa TnpA, transposase (3' segment) | 98.5 | 66.5 | ||||||
CA_P0094 | TnpA, transposase (5' segment) | 104.5 | 29 | ||||||
CA_P0096 | ipyr Inorganic pyrophosphatase | 204 | 129 | ||||||
CA_P0097 | lipg Carboxyl esterase, a/b hydrolase | 671.5 | 391 | ||||||
CA_P0098 | amyA alpha-amylase | 81 | 36.5 | ||||||
CA_P0099 | muts DNA mismatch repair protein, MUTS fragment | 11 | 11 | ||||||
CA_P0100 | HTH transcriptional regulator TetR/AcrR family | 85 | 189.5 | ||||||
CA_P0101 | hypothetical protein | 58.5 | 158.5 | ||||||
CA_P0102 | Membrane protein | 197.5 | 1702 | ||||||
CA_P0103 | arsr Transcriptional regulator HTH-type, ArsR family | 68.5 | 77.5 | ||||||
CA_P0104 | arsb Heavy metal resistance membrane protein | 72.5 | 117.5 | ||||||
CA_P0105 | arsc Arsenate reductase, arsC, protein-tyrosine-phosphatase family enzyme | 81 | 195 | ||||||
CA_P0106 | dxs 1-deoxyxylulose-5-phosphate synthase, dehydrogenase | 27 | 15 | ||||||
CA_P0107 | HTH transcriptional regulator MerR family | 50 | 36.5 | ||||||
CA_P0108 | Predicted HTH containing transcriptional regulator | 111 | 105.5 | ||||||
CA_P0110 | NH2-acetyltransferase | 52.5 | 66.5 | ||||||
CA_P0111 | NH2-acetyltransferase | 15 | 23.5 | ||||||
CA_P0112 | hypothetical protein | 838.5 | 4584.5 | ||||||
CA_P0113 | Solo B3/4 domain (OB-fold DNA/RNA-binding) of Phe-aaRS-beta | 990.5 | 461.5 | ||||||
CA_P0114 | Possible beta-xylosidase, family 43 of glycosyl hydrolases | 36 | 37.5 | ||||||
CA_P0116 | Xylanase, glycosyl hydrolase family 10 | 59 | 217 | ||||||
CA_P0117 | Possible beta-xylosidase diverged, family 5/39 of glycosyl hydrolases and alpha-amylase C (Greek key) C-terminal domain | 55 | 251.5 | ||||||
CA_P0118 | Possible xylan degradation enzyme (glycosyl hydrolase family 30-like domain and Ricin B-like domain) | 38 | 244 | ||||||
CA_P0119 | Possible xylan degradation enzyme (glycosyl hydrolase family 30-like domain and Ricin B-like domain) | 24.5 | 189.5 | ||||||
CA_P0120 | Possible xylan degradation enzyme (glycosyl hydrolase family 43-like domain, cellulose-binding domain and Ricin B-like domain) | 28 | 211.5 | ||||||
CA_P0121 | Leu-rich protein family protein, YaeG (E.coli) homolog | 1 | 7 | ||||||
CA_P0123 | hypothetical protein | 127.5 | 96 | ||||||
CA_P0124 | Permease, MDR related, probably tetracycline resistance protein | 507 | 909.5 | ||||||
CA_P0125 | hypothetical protein | 223 | 119 | ||||||
CA_P0126 | Uncharacterized protein (NN.term domain homologous to B.subtilis (gi|833839) | 271 | 159 | ||||||
CA_P0127 | HTH transcriptional regulator TetR family | 62 | 29 |
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4. array (low scan) | pH 4.5 / Cy5 | ||||||||
ORF | Name | (F 635 median - B635) - B635 SD | (F 532 median - B532) - B532 SD | pH 5.7 / Cy3 | |||||
CA_P0002 | Transglutaminase-like predicted protease domain fused ChW-repeats and cell-adhesion domain | 16.5 | 45 | ||||||
CA_P0003 | Transglutaminase-like predicted protease domain fused to ChW-repeats and cell-adhesion domain | 8.5 | 28.5 | ||||||
CA_P0004 | Cysteine protease | 3907 | 131.5 | ||||||
CA_P0005 | Uncharacterized protein similar to Bacteriocin immunity protein of mesC/lccI/entI family | 102 | 33 | ||||||
CA_P0006 | GntR family HTH transcriptional regulator | 269.5 | 312 | ||||||
CA_P0007 | hypothetical protein | 159.5 | 180 | ||||||
CA_P0009 | Response regulator (CheY + HTH domains) | 596 | 133.5 | ||||||
CA_P0010 | bgla Beta_glucosidase | 508.5 | 160 | ||||||
CA_P0012 | pedb Pediocin immunity protein, PedB | 2200 | 842 | ||||||
CA_P0013 | FAD dependent dehydrogenase | 190.5 | 138 | ||||||
CA_P0014 | Protein tyrosine phosphatase II superfamily protein | 389.5 | 371.5 | ||||||
CA_P0015 | GLPQ related phosphodiesterase | 1249.5 | 475.5 | ||||||
CA_P0017 | grkb1 Spore germination protein, GRKB | 10 | 3 | ||||||
CA_P0019 | grkc Spore germination protein, GRKC | 43.5 | 12 | ||||||
CA_P0020 | grka Spore germination protein, GRKA | 88 | 31.5 | ||||||
CA_P0021 | hypothetical protein | 13 | 7 | ||||||
CA_P0023 | hypothetical protein | 3 | 12 | ||||||
CA_P0025 | pdc Pyruvate decarboxylase | 788.5 | 1078.5 | ||||||
CA_P0026 | hypothetical protein | 602 | 485 | ||||||
CA_P0027 | Predicted amino acid permeases | 61 | 28.5 | ||||||
CA_P0028 | HTH transcriptional regulator TetR family | 83 | 92 | ||||||
CA_P0031 | hlyU Transcriptional activator HLYU, HTH of ArsR family | 80.5 | 69 | ||||||
CA_P0032 | Rhodanese-like domain | 21 | 17 | ||||||
CA_P0033 | hypothetical protein | 87.5 | 59 | ||||||
CA_P0034 | Rhodanese-like domain | 636 | 396.5 | ||||||
CA_P0035 | adhe Aldehyde-alcohol dehydrogenase, ADHE1 | 87 | 243 | ||||||
CA_P0036 | Uncharacterized, ortholog of YgaT gene of B.subtillis | 258 | 54827.5 | ||||||
CA_P0037 | Uncharacterized, ortholog of YgaS gene of B.subtillis | 76 | 28223 | ||||||
CA_P0038 | Uncharacterized conserved protein, YCII family | 30.5 | 108.5 | ||||||
CA_P0040 | Xre family DNA-binding domain and TPR repeats containing protein | 233 | 48 | ||||||
CA_P0044 | hypothetical protein | 290 | 37.5 | ||||||
CA_P0045 | Glycosyl transferase | 329 | 25 | ||||||
CA_P0046 | TetR family HTH transcriptional regulator | 12 | 7 | ||||||
CA_P0047 | Sulphohydrolase/Glycosulfatase, Zn-dependent hydrolase | 29 | 18 | ||||||
CA_P0048 | Related to methyl-accepting chemotaxis protein | 124.5 | 173.5 | ||||||
CA_P0049 | Permease, MDR related | 120.5 | 25.5 | ||||||
CA_P0050 | pnba Para-nitrobenzyl esterase, a/b hydrolase | 338 | 427.5 | ||||||
CA_P0051 | Oxidoreductase | 38.5 | 21.5 | ||||||
CA_P0052 | MarR family HTH transcriptional regulator | 58 | 24 | ||||||
CA_P0053 | xynb Xylanase, glycosyl hydrolase family 10 | 1977.5 | 82.5 | ||||||
CA_P0054 | Xylanase/chitin deacetylase family enzyme | 3082.5 | 98 | ||||||
CA_P0055 | hypothetical protein | 221.5 | 75.5 | ||||||
CA_P0056 | pell Pectate lyase, secreted, polysaccharide lyase family | 1006 | 88.5 | ||||||
CA_P0057 | Putative glycoportein or S-layer protein | 455 | 399.5 | ||||||
CA_P0058 | Rare lipoprotein A RLPA releated protein | 1842 | 2759.5 | ||||||
CA_P0059 | Alcohol dehydrogenase | 146 | 155.5 | ||||||
CA_P0061 | hypothetical protein | 1 | 10 | ||||||
CA_P0062 | Hypothetical protein, CF-18 family | 12.5 | 22 | ||||||
CA_P0064 | alf Fructose-bisphosphate aldolase class I | 6.5 | 7 | ||||||
CA_P0065 | Predicted secreted metalloprotease | 1836 | 93 | ||||||
CA_P0066 | ptna Mannose-specific phosphotransferase system component IIAB | 2 | 21 | ||||||
CA_P0067 | manY/levF Mannose/fructose-specific phosphotransferase system component IIC | 3 | 30 | ||||||
CA_P0072 | hypothetical protein | 584 | 1204 | ||||||
CA_P0073 | ABC ATPase containing transporter | 153.5 | 339.5 | ||||||
CA_P0074 | hypothetical protein | 154.5 | 348.5 | ||||||
CA_P0076 | penicillin binding protein 1A | 119.5 | 179.5 | ||||||
CA_P0077 | Uncharacterized Fe-S protein | 3.5 | 8.5 | ||||||
CA_P0078 | thil Acetyl coenzyme A acetyltransferase (thiolase) | 31 | 76.5 | ||||||
CA_P0079 | thlr ThlR, HTH transcriptional regulator TetR/AcrR family | 122.5 | 172.5 | ||||||
CA_P0080 | Site-Specific Recombinase, Xerd | 51 | 42 | ||||||
CA_P0081 | TnpR resolvase C-terminal fragment | 22 | 24 | ||||||
CA_P0082 | crp CRP (cyclic AMP receptor protein) regulatory protein | 249 | 92 | ||||||
CA_P0083 | SAM-dependent methyltransferase | 117.5 | 286 | ||||||
CA_P0084 | hypothetical protein | 210 | 219.5 | ||||||
CA_P0085 | Hypothetical secreted protein (fragment) | 120.5 | 101.5 | ||||||
CA_P0086 | Permease, MDR related, probably tetracycline resistance protein | 223 | 257 | ||||||
CA_P0087 | HTH transcriptional regulator TetR/AcrR family | 1078.5 | 746.5 | ||||||
CA_P0088 | abf 3-oxoacyl-acyl-carrier protein synthase | 1604 | 935.5 | ||||||
CA_P0089 | Predicted membrane protein | 110 | 40 | ||||||
CA_P0090 | ABC-type transporter, ATPase component | 133 | 72 | ||||||
CA_P0091 | Predicted regulator of stationary/sporulation gene expression | 554 | 199 | ||||||
CA_P0093 | tnpa TnpA, transposase (3' segment) | 54 | 75 | ||||||
CA_P0094 | TnpA, transposase (5' segment) | 27 | 56 | ||||||
CA_P0096 | ipyr Inorganic pyrophosphatase | 155 | 138.5 | ||||||
CA_P0097 | lipg Carboxyl esterase, a/b hydrolase | 462.5 | 400 | ||||||
CA_P0098 | amyA alpha-amylase | 47 | 48.5 | ||||||
CA_P0099 | muts DNA mismatch repair protein, MUTS fragment | 24.5 | 4 | ||||||
CA_P0100 | HTH transcriptional regulator TetR/AcrR family | 163.5 | 75 | ||||||
CA_P0101 | hypothetical protein | 205 | 73.5 | ||||||
CA_P0102 | Membrane protein | 1998 | 154 | ||||||
CA_P0103 | arsr Transcriptional regulator HTH-type, ArsR family | 141 | 36 | ||||||
CA_P0104 | arsb Heavy metal resistance membrane protein | 141 | 44 | ||||||
CA_P0105 | arsc Arsenate reductase, arsC, protein-tyrosine-phosphatase family enzyme | 141 | 54 | ||||||
CA_P0106 | dxs 1-deoxyxylulose-5-phosphate synthase, dehydrogenase | 18.5 | 28 | ||||||
CA_P0107 | HTH transcriptional regulator MerR family | 51.5 | 38 | ||||||
CA_P0108 | Predicted HTH containing transcriptional regulator | 114.5 | 76 | ||||||
CA_P0110 | NH2-acetyltransferase | 56 | 42 | ||||||
CA_P0112 | hypothetical protein | 4686.5 | 784.5 | ||||||
CA_P0113 | Solo B3/4 domain (OB-fold DNA/RNA-binding) of Phe-aaRS-beta | 658 | 591.5 | ||||||
CA_P0114 | Possible beta-xylosidase, family 43 of glycosyl hydrolases | 19 | 16 | ||||||
CA_P0115 | xynD Endo-1,4-beta-xylanase XynD B.subtilis ortholog (family 43 glycosyl hydrolase and cellulose-binding domain) | 9 | 4 | ||||||
CA_P0116 | Xylanase, glycosyl hydrolase family 10 | 224.5 | 53 | ||||||
CA_P0117 | Possible beta-xylosidase diverged, family 5/39 of glycosyl hydrolases and alpha-amylase C (Greek key) C-terminal domain | 339.5 | 45 | ||||||
CA_P0118 | Possible xylan degradation enzyme (glycosyl hydrolase family 30-like domain and Ricin B-like domain) | 262.5 | 27.5 | ||||||
CA_P0119 | Possible xylan degradation enzyme (glycosyl hydrolase family 30-like domain and Ricin B-like domain) | 224 | 17 | ||||||
CA_P0120 | Possible xylan degradation enzyme (glycosyl hydrolase family 43-like domain, cellulose-binding domain and Ricin B-like domain) | 199.5 | 15 | ||||||
CA_P0123 | hypothetical protein | 102 | 79.5 | ||||||
CA_P0124 | Permease, MDR related, probably tetracycline resistance protein | 1062.5 | 421 |