Selected Cell
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Read me_data
Transcriptome_data
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1. Array
2. Array
3. Array
4. Array
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Description: | This data-sheet reflects the transcriptome of C. acetobutylicum concerning the comparison of acidogenesis to solventogenesis. Genes with average fold regulation > 1.0 (significant > 3.0) showed elevated transcript level in the acidogenesis (pH 5.7) or repressed transcript level in the solventogenesis (pH 4.5), respectively. Genes were figured out as significant induced, if the average fold regulation was > 3.0 and at least three out of four micro arrays were > 2.0.Furthermore, genes with fold regulation < 1.0 (significant < 0.33) showed elevated transcript level in the solventogenesis (pH 4.5) or repressed transcript level in the acidogenesis (pH 5.7), respectively. Genes were figured out as significant induced, if the average fold regulation was < 0.33 and at least three out of four micro arrays were < 0.5. | ||||||||
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ORF | Name | Array 1 | Array 2 | Array 3 | Array 4 | Average | Standard deviation | ||
CA_P0002 | Transglutaminase-like predicted protease domain fused ChW-repeats and cell-adhesion domain | 1.137 | 1.0828370330265296 | 2.4875 | 1.662510390689942 | 1.592461855929118 | 0.6514504429575791 | ||
CA_P0003 | Transglutaminase-like predicted protease domain fused to ChW-repeats and cell-adhesion domain | 1.5430000000000001 | 1.4598540145985401 | 1.5985 | 1.547987616099071 | 1.5373354076744028 | 0.05741669553324797 | ||
CA_P0004 | Cysteine protease | 0.022 | 0.0196645232336342 | 0.0415 | 0.036404011722091775 | 0.029892133738931494 | 0.010708826664698436 | ||
CA_P0005 | Uncharacterized protein similar to Bacteriocin immunity protein of mesC/lccI/entI family | 1.7045 | 1.4357501794687724 | 0.6385000000000001 | 0.39401103230890466 | 1.0431903029444192 | 0.6262698403501651 | ||
CA_P0006 | GntR family HTH transcriptional regulator | 0.9925 | 0.9925558312655086 | 0.9864999999999999 | 1.1389521640091116 | 1.027626998818655 | 0.0742711592209243 | ||
CA_P0007 | hypothetical protein | 1.155 | 1.106194690265487 | 1.58 | 1.0834236186348862 | 1.2311545772250934 | 0.23447249881260057 | ||
CA_P0009 | Response regulator (CheY + HTH domains) | 0.2465 | 0.2800336040324839 | 0.5075 | 0.23975065931431316 | 0.3184460658366993 | 0.1272610317963096 | ||
CA_P0010 | bgla Beta_glucosidase | 0.2975 | 0.32010243277848915 | 0.34650000000000003 | 0.3337226764558652 | 0.3244562773085886 | 0.020955418645163666 | ||
CA_P0012 | pedb Pediocin immunity protein, PedB | 0.763 | 0.6472491909385114 | 0.8755 | 0.3861749372465727 | 0.667981032046271 | 0.20971187427320875 | ||
CA_P0013 | FAD dependent dehydrogenase | 1.5255 | 1.17096018735363 | 1.764 | 0.7215007215007215 | 1.2954902272135878 | 0.4536436142574396 | ||
CA_P0014 | Protein tyrosine phosphatase II superfamily protein | 1.2175 | 1.0065425264217414 | 1.9925 | 0.9438414346389807 | 1.2900959902651805 | 0.4826787595781291 | ||
CA_P0015 | GLPQ related phosphodiesterase | 0.971 | 0.9103322712790168 | 0.7044999999999999 | 0.3896356906292616 | 0.7438669904770696 | 0.26225284711419483 | ||
CA_P0018 | hypothetical protein | 0.739 | 0.8779631255487269 | 0.508 | 0.7083210418495757 | 0.1868798475527586 | |||
CA_P0019 | grkc Spore germination protein, GRKC | 0.7225 | 0.9025270758122743 | 0.5569999999999999 | 0.5060728744939271 | 0.6720249875765504 | 0.1793040166530483 | ||
CA_P0020 | grka Spore germination protein, GRKA | 0.6765 | 0.7037297677691766 | 0.531 | 0.48250904704463216 | 0.5984347037034522 | 0.10827039936785426 | ||
CA_P0025 | pdc Pyruvate decarboxylase | 1.137 | 1.1173184357541899 | 2.144 | 1.358695652173913 | 1.4392535219820257 | 0.48240942499147804 | ||
CA_P0026 | hypothetical protein | 1.0845 | 1.1554015020219528 | 1.6505 | 1.3245033112582782 | 1.3037262033200578 | 0.25215345824543517 | ||
CA_P0027 | Predicted amino acid permeases | 0.877 | 0.7840062720501764 | 0.353 | 0.556947925368978 | 0.6427385493547886 | 0.2353320029802095 | ||
CA_P0028 | HTH transcriptional regulator TetR family | 1.2015 | 0.921234454168586 | 1.819 | 1.1061946902654867 | 1.2619822861085181 | 0.3891468019964196 | ||
CA_P0031 | hlyU Transcriptional activator HLYU, HTH of ArsR family | 1.1125 | 0.9960159362549801 | 1.0485 | 0.8616975441619993 | 1.0046783701042448 | 0.1065588936807836 | ||
CA_P0032 | Rhodanese-like domain | 0.9239999999999999 | 0.8417508417508418 | 1.278 | 0.8361204013377926 | 0.9699678107721585 | 0.20924593933533983 | ||
CA_P0033 | hypothetical protein | 0.8845000000000001 | 0.8186655751125665 | 1.119 | 0.721240533717995 | 0.8858515272076404 | 0.16928355731116965 | ||
CA_P0034 | Rhodanese-like domain | 0.835 | 0.7140307033202428 | 0.8405 | 0.6273525721455459 | 0.7542208188664471 | 0.10276213734532307 | ||
CA_P0035 | adhe Aldehyde-alcohol dehydrogenase, ADHE1 | 2.8995 | 3.3783783783783785 | 2.9415 | 2.306805074971165 | 2.8815458633373856 | 0.44010846062459397 | ||
CA_P0036 | Uncharacterized, ortholog of YgaT gene of B,subtillis | 90.372 | 19.047619047619047 | 269.9845 | 200 | 144.85102976190478 | 111.7948375720697 | ||
CA_P0037 | Uncharacterized, ortholog of YgaS gene of B,subtillis | 114.935 | 54.054054054054056 | 451.8835 | 250 | 217.7181385135135 | 176.28182096269487 | ||
CA_P0038 | Uncharacterized conserved protein, YCII family | 4.164 | 3.361344537815126 | 3.1865 | 2.5380710659898478 | 3.312478900951244 | 0.6690924726637282 | ||
CA_P0040 | Xre family DNA-binding domain and TPR repeats containing protein | 0.2145 | 0.1866019779809666 | 0.25549310168625444 | 0.21886502655574036 | 0.034652371116109144 | |||
CA_P0044 | hypothetical protein | 0.1835 | 0.16975046681378375 | 0.2865 | 0.18589088205223533 | 0.20641033721650476 | 0.05386474349185711 | ||
CA_P0045 | Glycosyl transferase | 0.1895 | 0.1760098565519669 | 0.226 | 0.14084507042253522 | 0.18308873174362553 | 0.03519999384382431 | ||
CA_P0046 | TetR family HTH transcriptional regulator | 0.467 | 0.4428697962798937 | 0.364 | 0.6353240152477764 | 0.4772984528819175 | 0.11416363740068204 | ||
CA_P0047 | Sulphohydrolase/Glycosulfatase, Zn-dependent hydrolase | 0.87 | 0.9170105456212746 | 0.7625 | 0.6966213862765587 | 0.8115329829744583 | 0.10025437110472638 | ||
CA_P0048 | Related to methyl-accepting chemotaxis protein | 1.509 | 1.6949152542372883 | 1.675 | 1.3793103448275863 | 1.5645563997662186 | 0.14898974707108825 | ||
CA_P0049 | Permease, MDR related | 0.816 | 0.9128251939753538 | 0.4305 | 0.3269042170644001 | 0.6215573527599384 | 0.2863379593015107 | ||
CA_P0050 | pnba Para-nitrobenzyl esterase, a/b hydrolase | 0.98 | 1.1217049915872126 | 1.3225 | 1.2399256044637321 | 1.1660326490127362 | 0.14890185638174003 | ||
CA_P0052 | MarR family HTH transcriptional regulator | 1.439 | 1.4275517487508922 | 0.4505 | 0.49443757725587145 | 0.9528723315016909 | 0.5550318437106448 | ||
CA_P0053 | xynb Xylanase, glycosyl hydrolase family 10 | 0.059 | 0.06588917440864465 | 0.051000000000000004 | 0.04826021910139472 | 0.056037348377509844 | 0.00799363078202049 | ||
CA_P0054 | Xylanase/chitin deacetylase family enzyme | 0.0595 | 0.05707436790137549 | 0.061 | 0.036093264996751605 | 0.053416908224531774 | 0.011661802496399558 | ||
CA_P0055 | hypothetical protein | 1.02 | 0.9259259259259258 | 0.503 | 0.37814331631688414 | 0.7067673105607024 | 0.31393208547289375 | ||
CA_P0056 | pell Pectate lyase, secreted, polysaccharide lyase family | 0.101 | 0.09124920156948627 | 0.159 | 0.11145165784341042 | 0.11567521485322417 | 0.03003812853555221 | ||
CA_P0057 | Putative glycoportein or S-layer protein | 0.6134999999999999 | 0.5497526113249038 | 1.396 | 0.8726003490401397 | 0.8579632400912608 | 0.3849042597027415 | ||
CA_P0058 | Rare lipoprotein A RLPA releated protein | 1.2525 | 1.187648456057007 | 1.455 | 1.4936519790888723 | 1.3472001087864698 | 0.1499931191239491 | ||
CA_P0059 | Alcohol dehydrogenase | 1.0234999999999999 | 0.8583690987124464 | 0.9135 | 1.0060362173038229 | 0.9503513290040673 | 0.07803906285148514 | ||
CA_P0062 | Hypothetical protein, CF-18 family | 1.08 | 0.9657170449058428 | 1.2865000000000002 | 1.4492753623188408 | 1.195373101806171 | 0.2151149510992163 | ||
CA_P0064 | alf Fructose-bisphosphate aldolase class I | 0.755 | 0.54421768707483 | 0.7993605115907275 | 0.6995260662218525 | 0.13631758221925774 | |||
CA_P0065 | Predicted secreted metalloprotease | 0.0665 | 0.06532745386248572 | 0.067 | 0.05780848050408996 | 0.06415898359164393 | 0.004291306883130686 | ||
CA_P0066 | ptna Mannose-specific phosphotransferase system component IIAB | 1.6455 | 1.773049645390071 | 1.8195000000000001 | 1.6920473773265652 | 1.732524255679159 | 0.07835535733454028 | ||
CA_P0067 | manY/levF Mannose/fructose-specific phosphotransferase system component IIC | 1.48 | 1.7889087656529519 | 1.4769999999999999 | 2.066115702479339 | 1.7030061170330728 | 0.2828652973020924 | ||
CA_P0072 | hypothetical protein | 1.9565000000000001 | 2.109704641350211 | 6.0375 | 2.0242914979757085 | 3.03199903483148 | 2.004647571156857 | ||
CA_P0073 | ABC ATPase containing transporter | 2.657 | 2.398081534772182 | 7.5625 | 2.1052631578947367 | 3.6807111731667295 | 2.597655628979498 | ||
CA_P0074 | hypothetical protein | 2.937 | 2.2050716648291067 | 8.293500000000002 | 2.0120724346076457 | 3.8619110248591886 | 2.9811329347204207 | ||
CA_P0076 | penicillin binding protein 1A | 1.4595 | 1.3783597518952446 | 2.3195 | 1.402524544179523 | 1.639971074018692 | 0.454294584382796 | ||
CA_P0079 | thlr ThlR, HTH transcriptional regulator TetR/AcrR family | 1.09 | 0.9900990099009901 | 2.6255 | 1.3280212483399734 | 1.5084050645602407 | 0.7580992415872404 | ||
CA_P0080 | Site-Specific Recombinase, Xerd | 0.8565 | 0.9237875288683602 | 0.9375 | 0.8554319931565441 | 0.893304880506226 | 0.043479325598566904 | ||
CA_P0081 | TnpR resolvase C-terminal fragment | 1.097 | 0.9803921568627451 | 0.8818342151675486 | 0.9864087906767646 | 0.10770899986760639 | |||
CA_P0082 | crp CRP (cyclic AMP receptor protein) regulatory protein | 0.9535 | 0.856898029134533 | 0.6065 | 0.39992001599680066 | 0.7042045112828333 | 0.25006584245297725 | ||
CA_P0083 | SAM-dependent methyltransferase | 2.0105 | 1.8034265103697025 | 3.0140000000000002 | 2.157497303128371 | 2.2463559533745183 | 0.5319736097044261 | ||
CA_P0084 | hypothetical protein | 1.229 | 1.2172854534388313 | 1.3385 | 0.9794319294809012 | 1.1910543457299332 | 0.15127481803197904 | ||
CA_P0085 | Hypothetical secreted protein (fragment) | 1.1804999999999999 | 1.0834236186348862 | 1.1355 | 0.8572653236176596 | 1.0641722355631364 | 0.14352802829578543 | ||
CA_P0086 | Permease, MDR related, probably tetracycline resistance protein | 0.9225 | 0.9930486593843098 | 1.332 | 1.124859392575928 | 1.0931020129900595 | 0.1799967590074701 | ||
CA_P0087 | HTH transcriptional regulator TetR/AcrR family | 1.54 | 1.2944983818770228 | 0.897 | 0.6918021445866482 | 1.1058251316159178 | 0.3825913316161554 | ||
CA_P0088 | abf 3-oxoacyl-acyl-carrier protein synthase | 0.9844999999999999 | 1.0775862068965518 | 0.667 | 0.5885815185403179 | 0.8294169313592175 | 0.23806140885603527 | ||
CA_P0089 | Predicted membrane protein | 1.0375 | 1.0389610389610389 | 0.4125 | 0.42589437819420783 | 0.7287138542888117 | 0.35744138732879893 | ||
CA_P0090 | ABC-type transporter, ATPase component | 1.1405 | 1.1820330969267139 | 0.46399999999999997 | 0.5374899220639613 | 0.8310057547476688 | 0.38290627698150487 | ||
CA_P0091 | Predicted regulator of stationary/sporulation gene expression | 0.7835000000000001 | 0.6281407035175879 | 0.8320000000000001 | 0.3787161522438932 | 0.6555892139403704 | 0.20403761715770213 | ||
CA_P0093 | tnpa TnpA, transposase (3' segment) | 0.8705 | 1.1092623405435387 | 1.1055000000000001 | 1.1494252873563218 | 1.0586719069749653 | 0.12701326031856566 | ||
CA_P0094 | TnpA, transposase (5' segment) | 1.0154999999999998 | 0.924214417744917 | 1.7719999999999998 | 1.4064697609001406 | 1.2795460446612643 | 0.38927342860810543 | ||
CA_P0096 | ipyr Inorganic pyrophosphatase | 0.782 | 0.8240626287597858 | 1.361 | 0.8695652173913044 | 0.9591569615377726 | 0.2702712069692132 | ||
CA_P0097 | lipg Carboxyl esterase, a/b hydrolase | 0.8345 | 0.7821666014861164 | 1.664 | 0.8517887563884157 | 1.033113839468633 | 0.4216310024905598 | ||
CA_P0098 | amyA alpha-amylase | 0.885 | 1.0822510822510822 | 1.385 | 1 | 1.0880627705627706 | 0.21384966237578326 | ||
CA_P0099 | muts DNA mismatch repair protein, MUTS fragment | 0.9844999999999999 | 0.84530853761623 | 0.467 | 0.4065040650406504 | 0.6758281506642201 | 0.2829290675184528 | ||
CA_P0100 | HTH transcriptional regulator TetR/AcrR family | 0.7195 | 0.6583278472679394 | 0.4235 | 0.4921259842519685 | 0.5733634578799769 | 0.13860425623103106 | ||
CA_P0101 | hypothetical protein | 0.6639999999999999 | 0.6209251785159888 | 0.411 | 0.4094165813715456 | 0.5263354399718836 | 0.13524179942543763 | ||
CA_P0102 | Membrane protein | 0.1095 | 0.09655771737556124 | 0.1225 | 0.08394191219675984 | 0.10312490739308026 | 0.01660473134081345 | ||
CA_P0103 | arsr Transcriptional regulator HTH-type, ArsR family | 0.733 | 0.5107252298263534 | 0.711 | 0.3293265272517701 | 0.5710129392695309 | 0.18963395852710238 | ||
CA_P0104 | arsb Heavy metal resistance membrane protein | 0.601 | 0.6489292667099287 | 0.6025 | 0.36737692872887584 | 0.5549515488597011 | 0.12701360114547103 | ||
CA_P0105 | arsc Arsenate reductase, arsC, protein-tyrosine-phosphatase family enzyme | 0.4445 | 0.5457025920873124 | 0.398 | 0.44964028776978415 | 0.4594607199642742 | 0.06200899030557114 | ||
CA_P0108 | Predicted HTH containing transcriptional regulator | 1.0405 | 0.8126777732629011 | 0.9059999999999999 | 0.7320644216691068 | 0.872810548733002 | 0.1324722797554954 | ||
CA_P0110 | NH2-acetyltransferase | 1.29 | 1.4074595355383532 | 0.654 | 0.8028904054596547 | 1.038587485249502 | 0.3663948185994026 | ||
CA_P0111 | NH2-acetyltransferase | 1.363 | 1.8281535648994514 | 0.469 | 1.220051188299817 | 0.6907607221893789 | |||
CA_P0112 | hypothetical protein | 0.267 | 0.24663953631767171 | 0.184 | 0.1697648756472286 | 0.2168511029912251 | 0.04725311419885985 | ||
CA_P0113 | Solo B3/4 domain (OB-fold DNA/RNA-binding) of Phe-aaRS-beta | 1.0339999999999998 | 0.7246376811594204 | 2.043 | 0.891662951404369 | 1.1733251581409474 | 0.5934082015378999 | ||
CA_P0114 | Possible beta-xylosidase, family 43 of glycosyl hydrolases | 0.355 | 0.36094567767550984 | 0.6619999999999999 | 0.7215007215007215 | 0.5248615997940578 | 0.19424664527792485 | ||
CA_P0116 | Xylanase, glycosyl hydrolase family 10 | 0.165 | 0.1679684219366759 | 0.279 | 0.2787456445993031 | 0.22267851663399474 | 0.06489899349428342 | ||
CA_P0117 | Possible beta-xylosidase diverged, family 5/39 of glycosyl hydrolases and alpha-amylase C (Greek key) C-terminal domain | 0.1245 | 0.12394645513138325 | 0.2225 | 0.19303156066016794 | 0.16599450394788778 | 0.049711520418359016 | ||
CA_P0118 | Possible xylan degradation enzyme (glycosyl hydrolase family 30-like domain and Ricin B-like domain) | 0.1395 | 0.16242995208316416 | 0.1785 | 0.1580403002765705 | 0.1596175630899337 | 0.016038080290065253 | ||
CA_P0119 | Possible xylan degradation enzyme (glycosyl hydrolase family 30-like domain and Ricin B-like domain) | 0.0925 | 0.0898069151324652 | 0.1515 | 0.12122681537156019 | 0.11375843262600635 | 0.028900973435956795 | ||
CA_P0120 | Possible xylan degradation enzyme (glycosyl hydrolase family 43-like domain, cellulose-binding domain and Ricin B-like domain) | 0.094 | 0.10471752447772134 | 0.1555 | 0.12634238787113078 | 0.12013997808721304 | 0.027141306567280508 | ||
CA_P0121 | Leu-rich protein family protein, YaeG (E,coli) homolog | 0.34 | 0.4024144869215292 | 0.287 | 0.34313816230717636 | 0.057771203854858476 | |||
CA_P0123 | hypothetical protein | 0.7295 | 0.723589001447178 | 1.0745 | 0.7864726700747149 | 0.8285154178804732 | 0.16642276800081074 | ||
CA_P0124 | Permease, MDR related, probably tetracycline resistance protein | 0.9065000000000001 | 0.8012820512820513 | 0.5505 | 0.4025764895330113 | 0.6652146352037657 | 0.23012403327653436 | ||
CA_P0125 | hypothetical protein | 1.3725 | 1.2077294685990336 | 1.5325 | 1.5600624024960998 | 1.4181979677737833 | 0.16286575843687204 | ||
CA_P0126 | Uncharacterized protein (NN,term domain homologous to B,subtilis (gi|833839) | 1.2885 | 1.2070006035003018 | 1.4875 | 1.5936254980079683 | 1.3941565253770676 | 0.1776621472959332 | ||
CA_P0127 | HTH transcriptional regulator TetR family | 1.5485 | 1.2539184952978057 | 1.226 | 1.1820330969267139 | 1.3026128980561298 | 0.1665739438921093 | ||
CA_P0128 | Permease, MDR related | 0.295 | 0.2476166893648632 | 0.049 | 0.04119125097829221 | 0.15820198508578887 | 0.1320672450797133 | ||
CA_P0129 | Glycogen-binding regulatory subunit of S/T protein phosphatase I | 0.194 | 0.20986358866736624 | 0.2235 | 0.24786218862312556 | 0.21880644432262297 | 0.02281520026177667 | ||
CA_P0131 | Permease, MDR related | 1.238 | 1.2135922330097089 | 0.33799999999999997 | 0.5986231667165519 | 0.8470538499315653 | 0.4502010310278794 | ||
CA_P0132 | hypothetical protein | 1.097 | 1.6406890894175552 | 0.6105006105006106 | 1.1160632333060552 | 0.5153587397836222 | |||
CA_P0133 | Antibiotic-resistance protein, alpha/beta superfamily hydrolase | 0.7195 | 0.7132667617689015 | 1.0375 | 1.1655011655011656 | 0.9089419818175168 | 0.22841981451372254 |
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Description: | The single sheets contain the transcript amount of the genes for all four microarrays (sheet 1 to 4). The first biological experiment will be represented by the 1. and 2. array. The 3. and 4. array showed the transcript level of the second biological experiment. The 1. and 3. array the cDNA of pH 4.5 was labeled by Cy3 and pH 5.7 by Cy5, respectively. The 2. and 4. array contained the transcript level of the dyeflip (pH 4.5 Cy5 / pH 5.7 Cy3). Furthermore, the 1. and 2. array were evaluated under high scanning conditions and the 3. and 4. array under low scanning conditions. | ||||||||
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1. Array (high Scan) | pH 4.5 / Cy3 | ||||||||
ORF | Name | (F 635 median - B635) - B635 SD | (F 532 median - B532) - B532 SD | pH 5.7 / Cy5 | |||||
CA_P0002 | Transglutaminase-like predicted protease domain fused ChW-repeats and cell-adhesion domain | 373.5 | 279 | ||||||
CA_P0003 | Transglutaminase-like predicted protease domain fused to ChW-repeats and cell-adhesion domain | 266 | 109 | ||||||
CA_P0004 | Cysteine protease | 415.5 | 20426.5 | ||||||
CA_P0005 | Uncharacterized protein similar to Bacteriocin immunity protein of mesC/lccI/entI family | 340.5 | 101.5 | ||||||
CA_P0006 | GntR family HTH transcriptional regulator | 1748.5 | 1721 | ||||||
CA_P0007 | hypothetical protein | 1246 | 1028 | ||||||
CA_P0009 | Response regulator (CheY + HTH domains) | 445 | 1880 | ||||||
CA_P0010 | bgla Beta_glucosidase | 660 | 2242.5 | ||||||
CA_P0012 | pedb Pediocin immunity protein, PedB | 3038 | 3942 | ||||||
CA_P0013 | FAD dependent dehydrogenase | 1007.5 | 603 | ||||||
CA_P0014 | Protein tyrosine phosphatase II superfamily protein | 1855 | 1464.5 | ||||||
CA_P0015 | GLPQ related phosphodiesterase | 3905.5 | 3969 | ||||||
CA_P0018 | hypothetical protein | 63 | 32 | ||||||
CA_P0019 | grkc Spore germination protein, GRKC | 129 | 127.5 | ||||||
CA_P0020 | grka Spore germination protein, GRKA | 168 | 213.5 | ||||||
CA_P0024 | MarR family HTH transcriptional regulator | 95 | 81 | ||||||
CA_P0025 | pdc Pyruvate decarboxylase | 5988 | 5220.5 | ||||||
CA_P0026 | hypothetical protein | 5853.5 | 5351 | ||||||
CA_P0027 | Predicted amino acid permeases | 235.5 | 219.5 | ||||||
CA_P0028 | HTH transcriptional regulator TetR family | 657 | 496 | ||||||
CA_P0031 | hlyU Transcriptional activator HLYU, HTH of ArsR family | 458.5 | 346 | ||||||
CA_P0032 | Rhodanese-like domain | 257.5 | 247 | ||||||
CA_P0033 | hypothetical protein | 411.5 | 417.5 | ||||||
CA_P0034 | Rhodanese-like domain | 2115 | 2481 | ||||||
CA_P0035 | adhe Aldehyde-alcohol dehydrogenase, ADHE1 | 2648.5 | 850.5 | ||||||
CA_P0036 | Uncharacterized, ortholog of YgaT gene of B,subtillis | 46107.5 | 445 | ||||||
CA_P0037 | Uncharacterized, ortholog of YgaS gene of B,subtillis | 46444.5 | 354.5 | ||||||
CA_P0038 | Uncharacterized conserved protein, YCII family | 988.5 | 178.5 | ||||||
CA_P0040 | Xre family DNA-binding domain and TPR repeats containing protein | 403 | 1927.5 | ||||||
CA_P0044 | hypothetical protein | 208 | 1194.5 | ||||||
CA_P0045 | Glycosyl transferase | 356.5 | 1915 | ||||||
CA_P0046 | TetR family HTH transcriptional regulator | 78 | 135 | ||||||
CA_P0047 | Sulphohydrolase/Glycosulfatase, Zn-dependent hydrolase | 107 | 70 | ||||||
CA_P0048 | Related to methyl-accepting chemotaxis protein | 1133.5 | 688.5 | ||||||
CA_P0049 | Permease, MDR related | 166 | 147 | ||||||
CA_P0050 | pnba Para-nitrobenzyl esterase, a/b hydrolase | 1928.5 | 1907 | ||||||
CA_P0052 | MarR family HTH transcriptional regulator | 473.5 | 317 | ||||||
CA_P0053 | xynb Xylanase, glycosyl hydrolase family 10 | 311.5 | 5611 | ||||||
CA_P0054 | Xylanase/chitin deacetylase family enzyme | 439 | 7819.5 | ||||||
CA_P0055 | hypothetical protein | 294.5 | 241 | ||||||
CA_P0056 | pell Pectate lyase, secreted, polysaccharide lyase family | 434 | 4597 | ||||||
CA_P0057 | Putative glycoportein or S-layer protein | 684.5 | 1091.5 | ||||||
CA_P0058 | Rare lipoprotein A RLPA releated protein | 11422 | 9077.5 | ||||||
CA_P0059 | Alcohol dehydrogenase | 1053 | 982 | ||||||
CA_P0062 | Hypothetical protein, CF-18 family | 138.5 | 69 | ||||||
CA_P0064 | alf Fructose-bisphosphate aldolase class I | 85.5 | 76 | ||||||
CA_P0065 | Predicted secreted metalloprotease | 310 | 4875 | ||||||
CA_P0066 | ptna Mannose-specific phosphotransferase system component IIAB | 104.5 | 15 | ||||||
CA_P0067 | manY/levF Mannose/fructose-specific phosphotransferase system component IIC | 204 | 52 | ||||||
CA_P0072 | hypothetical protein | 5976.5 | 2992.5 | ||||||
CA_P0073 | ABC ATPase containing transporter | 2071.5 | 725 | ||||||
CA_P0074 | hypothetical protein | 1774 | 546 | ||||||
CA_P0076 | penicillin binding protein 1A | 928 | 564.5 | ||||||
CA_P0077 | Uncharacterized Fe-S protein | 142.5 | 71.5 | ||||||
CA_P0079 | thlr ThlR, HTH transcriptional regulator TetR/AcrR family | 2049.5 | 1822.5 | ||||||
CA_P0080 | Site-Specific Recombinase, Xerd | 292.5 | 297.5 | ||||||
CA_P0081 | TnpR resolvase C-terminal fragment | 224 | 161.5 | ||||||
CA_P0082 | crp CRP (cyclic AMP receptor protein) regulatory protein | 722.5 | 711.5 | ||||||
CA_P0083 | SAM-dependent methyltransferase | 1307.5 | 605 | ||||||
CA_P0084 | hypothetical protein | 1124 | 831 | ||||||
CA_P0085 | Hypothetical secreted protein (fragment) | 631.5 | 489 | ||||||
CA_P0086 | Permease, MDR related, probably tetracycline resistance protein | 635.5 | 606.5 | ||||||
CA_P0087 | HTH transcriptional regulator TetR/AcrR family | 3898.5 | 2437.5 | ||||||
CA_P0088 | abf 3-oxoacyl-acyl-carrier protein synthase | 1694 | 1179.5 | ||||||
CA_P0089 | Predicted membrane protein | 158 | 86 | ||||||
CA_P0090 | ABC-type transporter, ATPase component | 330 | 239 | ||||||
CA_P0091 | Predicted regulator of stationary/sporulation gene expression | 1641.5 | 1946 | ||||||
CA_P0093 | tnpa TnpA, transposase (3' segment) | 427.5 | 420.5 | ||||||
CA_P0094 | TnpA, transposase (5' segment) | 589.5 | 522.5 | ||||||
CA_P0096 | ipyr Inorganic pyrophosphatase | 820.5 | 1010.5 | ||||||
CA_P0097 | lipg Carboxyl esterase, a/b hydrolase | 2128 | 2506 | ||||||
CA_P0098 | amyA alpha-amylase | 295.5 | 261.5 | ||||||
CA_P0099 | muts DNA mismatch repair protein, MUTS fragment | 234 | 182.5 | ||||||
CA_P0100 | HTH transcriptional regulator TetR/AcrR family | 638 | 838 | ||||||
CA_P0101 | hypothetical protein | 742 | 1077.5 | ||||||
CA_P0102 | Membrane protein | 891.5 | 8260.5 | ||||||
CA_P0103 | arsr Transcriptional regulator HTH-type, ArsR family | 426 | 516 | ||||||
CA_P0104 | arsb Heavy metal resistance membrane protein | 212 | 334 | ||||||
CA_P0105 | arsc Arsenate reductase, arsC, protein-tyrosine-phosphatase family enzyme | 259 | 556 | ||||||
CA_P0107 | HTH transcriptional regulator MerR family | 301.5 | 233.5 | ||||||
CA_P0108 | Predicted HTH containing transcriptional regulator | 861 | 780 | ||||||
CA_P0110 | NH2-acetyltransferase | 372.5 | 235 | ||||||
CA_P0111 | NH2-acetyltransferase | 167 | 37 | ||||||
CA_P0112 | hypothetical protein | 3320.5 | 12481.5 | ||||||
CA_P0113 | Solo B3/4 domain (OB-fold DNA/RNA-binding) of Phe-aaRS-beta | 3682 | 3518.5 | ||||||
CA_P0114 | Possible beta-xylosidase, family 43 of glycosyl hydrolases | 97 | 252.5 | ||||||
CA_P0115 | xynD Endo-1,4-beta-xylanase XynD B,subtilis ortholog (family 43 glycosyl hydrolase and cellulose-binding domain) | 3 | 99 | ||||||
CA_P0116 | Xylanase, glycosyl hydrolase family 10 | 253.5 | 1616 | ||||||
CA_P0117 | Possible beta-xylosidase diverged, family 5/39 of glycosyl hydrolases and alpha-amylase C (Greek key) C-terminal domain | 181.5 | 1570.5 | ||||||
CA_P0118 | Possible xylan degradation enzyme (glycosyl hydrolase family 30-like domain and Ricin B-like domain) | 194 | 1459 | ||||||
CA_P0119 | Possible xylan degradation enzyme (glycosyl hydrolase family 30-like domain and Ricin B-like domain) | 78 | 1033.5 | ||||||
CA_P0120 | Possible xylan degradation enzyme (glycosyl hydrolase family 43-like domain, cellulose-binding domain and Ricin B-like domain) | 96 | 1150.5 | ||||||
CA_P0121 | Leu-rich protein family protein, YaeG (E,coli) homolog | 23 | 67 | ||||||
CA_P0123 | hypothetical protein | 597.5 | 758.5 | ||||||
CA_P0124 | Permease, MDR related, probably tetracycline resistance protein | 1910 | 2061.5 | ||||||
CA_P0125 | hypothetical protein | 1040 | 703.5 | ||||||
CA_P0126 | Uncharacterized protein (NN,term domain homologous to B,subtilis (gi|833839) | 2070 | 1554 | ||||||
CA_P0127 | HTH transcriptional regulator TetR family | 393 | 205 |
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CAC2635 | hypothetical protein | 912 | 311 | ||||||||
CAC2636 | Predicted GTPase, YSXC B,subtilis ortholog | 2234 | 1847.5 | ||||||||
CAC2637 | lonA ATP-dependent Lon protease | 972.5 | 1065 | ||||||||
CAC2639 | clpX ATP-dependent protease ATP-binding subunit | 12484 | 9846.5 | ||||||||
CAC2640 | clpP ATP-dependent Clp protease proteolytic subunit | 14298 | 9941.5 | ||||||||
CAC2641 | tig trigger factor | 22368.5 | 18425 | ||||||||
CAC2642 | Predicted endonuclease | 1636 | 353 | ||||||||
CAC2643 | hypothetical protein | 2565 | 2013.5 | ||||||||
CAC2644 | carB Carbamoylphosphate synthase large subunit | 1566.5 | 707 | ||||||||
CAC2645 | carA carbamoyl-phosphate synthase small subunit | 516.5 | 267.5 | ||||||||
CAC2646 | sipS Signal peptidase I | 773 | 706 | ||||||||
CAC2647 | Diverged arginase family hydrolase | 2852.5 | 2622 | ||||||||
CAC2648 | hypothetical protein | 253 | 23 | ||||||||
CAC2649 | hypothetical protein | 1077 | 372.5 | ||||||||
CAC2650 | pyrD dihydroorotate dehydrogenase | 1678 | 196 | ||||||||
CAC2651 | pyrZ dihydroorotate dehydrogenase electron transfer subunit | 1613.5 | 160.5 | ||||||||
CAC2652 | pyrF orotidine 5'-phosphate decarboxylase | 1383 | 103 | ||||||||
CAC2653 | pyrI aspartate carbamoyltransferase regulatory subunit | 928.5 | 144 | ||||||||
CAC2654 | pyrB aspartate carbamoyltransferase catalytic subunit | 883 | 36 | ||||||||
CAC2655 | Uncharacterized membrane-associated protein, DedA family | 1000.5 | 1209 | ||||||||
CAC2656 | Protein containing uncharacterized domain from NimC family | 145 | 80 | ||||||||
CAC2657 | Polyferredoxin | 267.5 | 153.5 | ||||||||
CAC2658 | glnA Glutamine synthetase type III | 3147.5 | 1544 | ||||||||
CAC2659 | Putative stress-responsive transcriptional regulator PspC | 942 | 1378 | ||||||||
CAC2660 | pykA Pyruvate carboxylase, PYKA | 1471 | 2350.5 | ||||||||
CAC2662 | hypothetical protein | 528.5 | 652.5 | ||||||||
CAC2663 | Protein containing cell-wall hydrolase domain | 3782 | 1375 | ||||||||
CAC2664 | Predicted phosphoesterase, YSNB B,subtilis ortholog | 73 | 118 | ||||||||
CAC2665 | putative deoxyribonucleotide triphosphate pyrophosphatase | 284.5 | 297.5 | ||||||||
CAC2669 | aspartyl/glutamyl-tRNA amidotransferase subunit B | 2901 | 2778 | ||||||||
CAC2670 | Glu-tRNAGln amidotransferase subunit A | 1517.5 | 1335 | ||||||||
CAC2671 | Glu-tRNAGln amidotransferase subunit C | 1315 | 1180 | ||||||||
CAC2672 | Predicted membrane protein | 524.5 | 579 | ||||||||
CAC2673 | DNA ligase | 363.5 | 421.5 | ||||||||
CAC2674 | ATP-dependent superfamily I DNA helicase, PCRA | 898 | 990.5 | ||||||||
CAC2675 | Uncharcterized protein, YECD B,subtilis homolog | 196 | 176 | ||||||||
CAC2676 | Predicted pseudouridylate synthase | 264.5 | 181.5 | ||||||||
CAC2677 | Lytic murein transglycosylase | 3392 | 2521 | ||||||||
CAC2678 | hypothetical protein | 341 | 178 | ||||||||
CAC2679 | Pullulanase | 227 | 169.5 | ||||||||
CAC2680 | pgi glucose-6-phosphate isomerase | 9611 | 10923 | ||||||||
CAC2681 | hypothetical protein | 470.5 | 1392.5 | ||||||||
CAC2684 | Sugar kinase, ribokinase family | 144 | 179 | ||||||||
CAC2685 | Trehalose/maltose hydrolase (phosphorylase) | 62 | 60 | ||||||||
CAC2687 | recQ RecQ protein, superfamily II DNA helicase | 350 | 251.5 | ||||||||
CAC2688 | Alpha/beta superfamily hydrolase (possible chloroperoxidase) | 1090 | 548.5 | ||||||||
CAC2693 | Predicted membrane protein | 72 | 25 | ||||||||
CAC2695 | Diverged Metallo-dependent hydrolase(Zn) of DD-Peptidase family, peptodoglycan-binding domain | 19921 | 4805.5 | ||||||||
CAC2696 | Predicted membrane protein | 522 | 662 | ||||||||
CAC2697 | hypothetical protein | 479 | 511 | ||||||||
CAC2700 | guaA bifunctional GMP synthase/glutamine amidotransferase protein | 1755.5 | 2595 | ||||||||
CAC2701 | guaB inositol-5-monophosphate dehydrogenase | 18833 | 20696.5 | ||||||||
CAC2702 | Possible signal transduction protein (containing EAL, CBS and GGDEF domains) | 111.5 | 539 | ||||||||
CAC2703 | groEL chaperonin GroEL | 56447.5 | 26285.5 | ||||||||
CAC2704 | groES Co-chaperonin GroES, HSP10 family | 53528.5 | 22770.5 | ||||||||
CAC2706 | Uncharacterized conserved membrane protein, DedA family | 807.5 | 570.5 | ||||||||
CAC2707 | 8-oxoguanine-DNA-glycosylase | 1595.5 | 1525 | ||||||||
CAC2708 | hbd 3-hydroxybutyryl-CoA dehydrogenase | 11625.5 | 17968.5 | ||||||||
CAC2709 | etfA Electron transfer flavoprotein alpha-subunit | 30630 | 62849 | ||||||||
CAC2710 | etfB Electron transfer flavoprotein beta-subunit | 39732 | 62943.5 | ||||||||
CAC2711 | bcd Butyryl-CoA dehydrogenase | 34991.5 | 61636 | ||||||||
CAC2712 | crt enoyl-CoA hydratase | 32517.5 | 58451 | ||||||||
CAC2713 | redox-sensing transcriptional repressor Rex | 1681.5 | 2832.5 | ||||||||
CAC2714 | ABC-type transporter, duplicate ATPase component | 710 | 834.5 | ||||||||
CAC2715 | hypothetical protein | 204.5 | 116 | ||||||||
CAC2716 | Predicted glycosyl transferase from UDP-glucuronosyltransferase family | 7757.5 | 4462 | ||||||||
CAC2720 | Sensory protein containing histidine kinase, PAS anf GAF domains | 205 | 102 | ||||||||
CAC2721 | Response regulator (CheY-like reciever domain and HTH-type DNA-binding domain) | 131 | 65 | ||||||||
CAC2722 | RCC1 repeats protein (beta propeller fold) | 1752.5 | 915.5 | ||||||||
CAC2723 | succinyl-diaminopimelate desuccinylase | 3649.5 | 4857.5 | ||||||||
CAC2724 | hypothetical protein | 675.5 | 863 | ||||||||
CAC2725 | Predicted hydrolase from alpha/beta family, YQKD B,subtilis ortholog | 880 | 910.5 | ||||||||
CAC2726 | Uncharacterized protein, possible ynzC B,subtilis homolog | 922 | 1148 | ||||||||
CAC2727 | hypothetical protein | 783 | 1101.5 | ||||||||
CAC2729 | Secreted protein containing SH3 domain homolog | 13 | 29 | ||||||||
CAC2730 | Signal transduction histidine kinase | 114 | 38 | ||||||||
CAC2732 | ABC transporter, ATPase component | 252.5 | 204.5 | ||||||||
CAC2736 | sbcC ATPase involved in DNA repair | 223.5 | 263.5 | ||||||||
CAC2737 | sbcD DNA repair exonuclease | 278.5 | 228.5 | ||||||||
CAC2738 | hypothetical protein | 394.5 | 394.5 | ||||||||
CAC2739 | Predicted acetyltransferase | 434 | 300 | ||||||||
CAC2740 | hisS Histidyl-tRNA synthetase | 2699 | 2621 | ||||||||
CAC2742 | Predicted membrane protein | 74 | 348.5 | ||||||||
CAC2743 | Predicted permease, YXIO B,subtilis ortholog | 370 | 1179.5 | ||||||||
CAC2746 | Membrane associated methyl-accepting chemotaxis protein (with HAMP domain) | 52 | 52 | ||||||||
CAC2749 | phosphodiesterase | 186 | 135 | ||||||||
CAC2750 | hydroxylamine reductase | 429 | 313.5 | ||||||||
CAC2751 | Predicted acetyltransferase | 318.5 | 271 | ||||||||
CAC2752 | Uncharacterized membrane protein, YPAA B,subtilis ortholog | 646.5 | 333.5 | ||||||||
CAC2753 | Possible MDR-type permease, YQJV B,subtilis ortholog | 807 | 614 | ||||||||
CAC2755 | MDR-type ABC transporter (membrane associated ATPase) | 332.5 | 298 | ||||||||
CAC2756 | MDR-type ABC transporter (membrane associated ATPase) | 244 | 256 | ||||||||
CAC2757 | Predicted membrane protein | 1486.5 | 2535 | ||||||||
CAC2758 | Uncharacterized protein, YPUA B,subtilis ortholog | 2513 | 4485.5 | ||||||||
CAC2759 | Response regulator (CheY receiver domain and HTH-type DNA-binding domain) | 9 | 125 | ||||||||
CAC2763 | Membrane assosiated methyl-accepting chemotaxis protein with HAMP domain | 68 | 59 | ||||||||
CAC2767 | hypothetical protein | 165 | 203.5 | ||||||||
CAC2768 | Transcriptional regulators, AcrR family | 171.5 | 238.5 | ||||||||
CAC2769 | ppiB Peptidyl-prolyl cis-transisomerase, cyclophilin family | 1128 | 777 | ||||||||
CAC2770 | Amino acid transporter | 2819 | 1632.5 |
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3. array (low scan) | pH 4.5 / Cy3 | ||||||||
ORF | Name | (F 635 median - B635) - B635 SD | (F 532 median - B532) - B532 SD | pH 5.7 / Cy5 | |||||
CA_P0002 | Transglutaminase-like predicted protease domain fused ChW-repeats and cell-adhesion domain | 106.5 | 14.5 | ||||||
CA_P0003 | Transglutaminase-like predicted protease domain fused to ChW-repeats and cell-adhesion domain | 64 | 10 | ||||||
CA_P0004 | Cysteine protease | 167.5 | 4352 | ||||||
CA_P0005 | Uncharacterized protein similar to Bacteriocin immunity protein of mesC/lccI/entI family | 50 | 62.5 | ||||||
CA_P0006 | GntR family HTH transcriptional regulator | 326.5 | 314 | ||||||
CA_P0007 | hypothetical protein | 523.5 | 311 | ||||||
CA_P0009 | Response regulator (CheY + HTH domains) | 197 | 376 | ||||||
CA_P0010 | bgla Beta_glucosidase | 181 | 522.5 | ||||||
CA_P0012 | pedb Pediocin immunity protein, PedB | 1352.5 | 1527.5 | ||||||
CA_P0013 | FAD dependent dehydrogenase | 232.5 | 107.5 | ||||||
CA_P0014 | Protein tyrosine phosphatase II superfamily protein | 534 | 238.5 | ||||||
CA_P0015 | GLPQ related phosphodiesterase | 725.5 | 1011.5 | ||||||
CA_P0018 | hypothetical protein | 9 | 7 | ||||||
CA_P0019 | grkc Spore germination protein, GRKC | 22.5 | 27.5 | ||||||
CA_P0020 | grka Spore germination protein, GRKA | 52 | 85.5 | ||||||
CA_P0025 | pdc Pyruvate decarboxylase | 1341 | 601.5 | ||||||
CA_P0026 | hypothetical protein | 1107 | 650 | ||||||
CA_P0027 | Predicted amino acid permeases | 20.5 | 54 | ||||||
CA_P0028 | HTH transcriptional regulator TetR family | 130 | 41 | ||||||
CA_P0031 | hlyU Transcriptional activator HLYU, HTH of ArsR family | 107 | 77.5 | ||||||
CA_P0032 | Rhodanese-like domain | 42.5 | 10.5 | ||||||
CA_P0033 | hypothetical protein | 105 | 71 | ||||||
CA_P0034 | Rhodanese-like domain | 519 | 591 | ||||||
CA_P0035 | adhe Aldehyde-alcohol dehydrogenase, ADHE1 | 324 | 81 | ||||||
CA_P0036 | Uncharacterized, ortholog of YgaT gene of B.subtillis | 36982.5 | 101.5 | ||||||
CA_P0037 | Uncharacterized, ortholog of YgaS gene of B.subtillis | 27184.5 | 32 | ||||||
CA_P0038 | Uncharacterized conserved protein, YCII family | 153.5 | 22 | ||||||
CA_P0044 | hypothetical protein | 76.5 | 268.5 | ||||||
CA_P0045 | Glycosyl transferase | 84 | 377 | ||||||
CA_P0046 | TetR family HTH transcriptional regulator | 10 | 25 | ||||||
CA_P0047 | Sulphohydrolase/Glycosulfatase, Zn-dependent hydrolase | 31 | 19 | ||||||
CA_P0048 | Related to methyl-accepting chemotaxis protein | 248 | 125.5 | ||||||
CA_P0049 | Permease, MDR related | 33.5 | 69.5 | ||||||
CA_P0050 | pnba Para-nitrobenzyl esterase, a/b hydrolase | 471 | 327.5 | ||||||
CA_P0051 | Oxidoreductase | 37 | 32.5 | ||||||
CA_P0052 | MarR family HTH transcriptional regulator | 28 | 42 | ||||||
CA_P0053 | xynb Xylanase, glycosyl hydrolase family 10 | 102.5 | 2182 | ||||||
CA_P0054 | Xylanase/chitin deacetylase family enzyme | 150 | 2618.5 | ||||||
CA_P0055 | hypothetical protein | 102 | 218.5 | ||||||
CA_P0056 | pell Pectate lyase, secreted, polysaccharide lyase family | 140 | 904 | ||||||
CA_P0057 | Putative glycoportein or S-layer protein | 554.5 | 373.5 | ||||||
CA_P0058 | Rare lipoprotein A RLPA releated protein | 2633.5 | 1793.5 | ||||||
CA_P0059 | Alcohol dehydrogenase | 181.5 | 176 | ||||||
CA_P0061 | hypothetical protein | 18 | 11 | ||||||
CA_P0062 | Hypothetical protein, CF-18 family | 42 | 7.5 | ||||||
CA_P0065 | Predicted secreted metalloprotease | 112.5 | 1834.5 | ||||||
CA_P0066 | ptna Mannose-specific phosphotransferase system component IIAB | 46 | 6 | ||||||
CA_P0067 | manY/levF Mannose/fructose-specific phosphotransferase system component IIC | 40.5 | 7 | ||||||
CA_P0070 | HAD phosphatase superfamily protein | 5 | 16 | ||||||
CA_P0072 | hypothetical protein | 2495 | 384.5 | ||||||
CA_P0073 | ABC ATPase containing transporter | 1289.5 | 145 | ||||||
CA_P0074 | hypothetical protein | 1090.5 | 105.5 | ||||||
CA_P0076 | penicillin binding protein 1A | 320 | 106 | ||||||
CA_P0077 | Uncharacterized Fe-S protein | 4 | 2 | ||||||
CA_P0078 | thil Acetyl coenzyme A acetyltransferase (thiolase) | 66.5 | 29.5 | ||||||
CA_P0079 | thlr ThlR, HTH transcriptional regulator TetR/AcrR family | 267 | 76.5 | ||||||
CA_P0080 | Site-Specific Recombinase, Xerd | 67 | 52.5 | ||||||
CA_P0082 | crp CRP (cyclic AMP receptor protein) regulatory protein | 122.5 | 188 | ||||||
CA_P0083 | SAM-dependent methyltransferase | 365 | 90.5 | ||||||
CA_P0084 | hypothetical protein | 260 | 168.5 | ||||||
CA_P0085 | Hypothetical secreted protein (fragment) | 138.5 | 105 | ||||||
CA_P0086 | Permease, MDR related, probably tetracycline resistance protein | 296.5 | 203.5 | ||||||
CA_P0087 | HTH transcriptional regulator TetR/AcrR family | 853.5 | 930 | ||||||
CA_P0088 | abf 3-oxoacyl-acyl-carrier protein synthase | 941.5 | 1379.5 | ||||||
CA_P0089 | Predicted membrane protein | 36.5 | 80.5 | ||||||
CA_P0090 | ABC-type transporter, ATPase component | 66 | 128.5 | ||||||
CA_P0091 | Predicted regulator of stationary/sporulation gene expression | 257.5 | 291.5 | ||||||
CA_P0093 | tnpa TnpA, transposase (3' segment) | 98.5 | 66.5 | ||||||
CA_P0094 | TnpA, transposase (5' segment) | 104.5 | 29 | ||||||
CA_P0096 | ipyr Inorganic pyrophosphatase | 204 | 129 | ||||||
CA_P0097 | lipg Carboxyl esterase, a/b hydrolase | 671.5 | 391 | ||||||
CA_P0098 | amyA alpha-amylase | 81 | 36.5 | ||||||
CA_P0099 | muts DNA mismatch repair protein, MUTS fragment | 11 | 11 | ||||||
CA_P0100 | HTH transcriptional regulator TetR/AcrR family | 85 | 189.5 | ||||||
CA_P0101 | hypothetical protein | 58.5 | 158.5 | ||||||
CA_P0102 | Membrane protein | 197.5 | 1702 | ||||||
CA_P0103 | arsr Transcriptional regulator HTH-type, ArsR family | 68.5 | 77.5 | ||||||
CA_P0104 | arsb Heavy metal resistance membrane protein | 72.5 | 117.5 | ||||||
CA_P0105 | arsc Arsenate reductase, arsC, protein-tyrosine-phosphatase family enzyme | 81 | 195 | ||||||
CA_P0106 | dxs 1-deoxyxylulose-5-phosphate synthase, dehydrogenase | 27 | 15 | ||||||
CA_P0107 | HTH transcriptional regulator MerR family | 50 | 36.5 | ||||||
CA_P0108 | Predicted HTH containing transcriptional regulator | 111 | 105.5 | ||||||
CA_P0110 | NH2-acetyltransferase | 52.5 | 66.5 | ||||||
CA_P0111 | NH2-acetyltransferase | 15 | 23.5 | ||||||
CA_P0112 | hypothetical protein | 838.5 | 4584.5 | ||||||
CA_P0113 | Solo B3/4 domain (OB-fold DNA/RNA-binding) of Phe-aaRS-beta | 990.5 | 461.5 | ||||||
CA_P0114 | Possible beta-xylosidase, family 43 of glycosyl hydrolases | 36 | 37.5 | ||||||
CA_P0116 | Xylanase, glycosyl hydrolase family 10 | 59 | 217 | ||||||
CA_P0117 | Possible beta-xylosidase diverged, family 5/39 of glycosyl hydrolases and alpha-amylase C (Greek key) C-terminal domain | 55 | 251.5 | ||||||
CA_P0118 | Possible xylan degradation enzyme (glycosyl hydrolase family 30-like domain and Ricin B-like domain) | 38 | 244 | ||||||
CA_P0119 | Possible xylan degradation enzyme (glycosyl hydrolase family 30-like domain and Ricin B-like domain) | 24.5 | 189.5 | ||||||
CA_P0120 | Possible xylan degradation enzyme (glycosyl hydrolase family 43-like domain, cellulose-binding domain and Ricin B-like domain) | 28 | 211.5 | ||||||
CA_P0121 | Leu-rich protein family protein, YaeG (E.coli) homolog | 1 | 7 | ||||||
CA_P0123 | hypothetical protein | 127.5 | 96 | ||||||
CA_P0124 | Permease, MDR related, probably tetracycline resistance protein | 507 | 909.5 | ||||||
CA_P0125 | hypothetical protein | 223 | 119 | ||||||
CA_P0126 | Uncharacterized protein (NN.term domain homologous to B.subtilis (gi|833839) | 271 | 159 | ||||||
CA_P0127 | HTH transcriptional regulator TetR family | 62 | 29 |
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4. array (low scan) | pH 4.5 / Cy5 | ||||||||
ORF | Name | (F 635 median - B635) - B635 SD | (F 532 median - B532) - B532 SD | pH 5.7 / Cy3 | |||||
CA_P0002 | Transglutaminase-like predicted protease domain fused ChW-repeats and cell-adhesion domain | 16.5 | 45 | ||||||
CA_P0003 | Transglutaminase-like predicted protease domain fused to ChW-repeats and cell-adhesion domain | 8.5 | 28.5 | ||||||
CA_P0004 | Cysteine protease | 3907 | 131.5 | ||||||
CA_P0005 | Uncharacterized protein similar to Bacteriocin immunity protein of mesC/lccI/entI family | 102 | 33 | ||||||
CA_P0006 | GntR family HTH transcriptional regulator | 269.5 | 312 | ||||||
CA_P0007 | hypothetical protein | 159.5 | 180 | ||||||
CA_P0009 | Response regulator (CheY + HTH domains) | 596 | 133.5 | ||||||
CA_P0010 | bgla Beta_glucosidase | 508.5 | 160 | ||||||
CA_P0012 | pedb Pediocin immunity protein, PedB | 2200 | 842 | ||||||
CA_P0013 | FAD dependent dehydrogenase | 190.5 | 138 | ||||||
CA_P0014 | Protein tyrosine phosphatase II superfamily protein | 389.5 | 371.5 | ||||||
CA_P0015 | GLPQ related phosphodiesterase | 1249.5 | 475.5 | ||||||
CA_P0017 | grkb1 Spore germination protein, GRKB | 10 | 3 | ||||||
CA_P0019 | grkc Spore germination protein, GRKC | 43.5 | 12 | ||||||
CA_P0020 | grka Spore germination protein, GRKA | 88 | 31.5 | ||||||
CA_P0021 | hypothetical protein | 13 | 7 | ||||||
CA_P0023 | hypothetical protein | 3 | 12 | ||||||
CA_P0025 | pdc Pyruvate decarboxylase | 788.5 | 1078.5 | ||||||
CA_P0026 | hypothetical protein | 602 | 485 | ||||||
CA_P0027 | Predicted amino acid permeases | 61 | 28.5 | ||||||
CA_P0028 | HTH transcriptional regulator TetR family | 83 | 92 | ||||||
CA_P0031 | hlyU Transcriptional activator HLYU, HTH of ArsR family | 80.5 | 69 | ||||||
CA_P0032 | Rhodanese-like domain | 21 | 17 | ||||||
CA_P0033 | hypothetical protein | 87.5 | 59 | ||||||
CA_P0034 | Rhodanese-like domain | 636 | 396.5 | ||||||
CA_P0035 | adhe Aldehyde-alcohol dehydrogenase, ADHE1 | 87 | 243 | ||||||
CA_P0036 | Uncharacterized, ortholog of YgaT gene of B.subtillis | 258 | 54827.5 | ||||||
CA_P0037 | Uncharacterized, ortholog of YgaS gene of B.subtillis | 76 | 28223 | ||||||
CA_P0038 | Uncharacterized conserved protein, YCII family | 30.5 | 108.5 | ||||||
CA_P0040 | Xre family DNA-binding domain and TPR repeats containing protein | 233 | 48 | ||||||
CA_P0044 | hypothetical protein | 290 | 37.5 | ||||||
CA_P0045 | Glycosyl transferase | 329 | 25 | ||||||
CA_P0046 | TetR family HTH transcriptional regulator | 12 | 7 | ||||||
CA_P0047 | Sulphohydrolase/Glycosulfatase, Zn-dependent hydrolase | 29 | 18 | ||||||
CA_P0048 | Related to methyl-accepting chemotaxis protein | 124.5 | 173.5 | ||||||
CA_P0049 | Permease, MDR related | 120.5 | 25.5 | ||||||
CA_P0050 | pnba Para-nitrobenzyl esterase, a/b hydrolase | 338 | 427.5 | ||||||
CA_P0051 | Oxidoreductase | 38.5 | 21.5 | ||||||
CA_P0052 | MarR family HTH transcriptional regulator | 58 | 24 | ||||||
CA_P0053 | xynb Xylanase, glycosyl hydrolase family 10 | 1977.5 | 82.5 | ||||||
CA_P0054 | Xylanase/chitin deacetylase family enzyme | 3082.5 | 98 | ||||||
CA_P0055 | hypothetical protein | 221.5 | 75.5 | ||||||
CA_P0056 | pell Pectate lyase, secreted, polysaccharide lyase family | 1006 | 88.5 | ||||||
CA_P0057 | Putative glycoportein or S-layer protein | 455 | 399.5 | ||||||
CA_P0058 | Rare lipoprotein A RLPA releated protein | 1842 | 2759.5 | ||||||
CA_P0059 | Alcohol dehydrogenase | 146 | 155.5 | ||||||
CA_P0061 | hypothetical protein | 1 | 10 | ||||||
CA_P0062 | Hypothetical protein, CF-18 family | 12.5 | 22 | ||||||
CA_P0064 | alf Fructose-bisphosphate aldolase class I | 6.5 | 7 | ||||||
CA_P0065 | Predicted secreted metalloprotease | 1836 | 93 | ||||||
CA_P0066 | ptna Mannose-specific phosphotransferase system component IIAB | 2 | 21 | ||||||
CA_P0067 | manY/levF Mannose/fructose-specific phosphotransferase system component IIC | 3 | 30 | ||||||
CA_P0072 | hypothetical protein | 584 | 1204 | ||||||
CA_P0073 | ABC ATPase containing transporter | 153.5 | 339.5 | ||||||
CA_P0074 | hypothetical protein | 154.5 | 348.5 | ||||||
CA_P0076 | penicillin binding protein 1A | 119.5 | 179.5 | ||||||
CA_P0077 | Uncharacterized Fe-S protein | 3.5 | 8.5 | ||||||
CA_P0078 | thil Acetyl coenzyme A acetyltransferase (thiolase) | 31 | 76.5 | ||||||
CA_P0079 | thlr ThlR, HTH transcriptional regulator TetR/AcrR family | 122.5 | 172.5 | ||||||
CA_P0080 | Site-Specific Recombinase, Xerd | 51 | 42 | ||||||
CA_P0081 | TnpR resolvase C-terminal fragment | 22 | 24 | ||||||
CA_P0082 | crp CRP (cyclic AMP receptor protein) regulatory protein | 249 | 92 | ||||||
CA_P0083 | SAM-dependent methyltransferase | 117.5 | 286 | ||||||
CA_P0084 | hypothetical protein | 210 | 219.5 | ||||||
CA_P0085 | Hypothetical secreted protein (fragment) | 120.5 | 101.5 | ||||||
CA_P0086 | Permease, MDR related, probably tetracycline resistance protein | 223 | 257 | ||||||
CA_P0087 | HTH transcriptional regulator TetR/AcrR family | 1078.5 | 746.5 | ||||||
CA_P0088 | abf 3-oxoacyl-acyl-carrier protein synthase | 1604 | 935.5 | ||||||
CA_P0089 | Predicted membrane protein | 110 | 40 | ||||||
CA_P0090 | ABC-type transporter, ATPase component | 133 | 72 | ||||||
CA_P0091 | Predicted regulator of stationary/sporulation gene expression | 554 | 199 | ||||||
CA_P0093 | tnpa TnpA, transposase (3' segment) | 54 | 75 | ||||||
CA_P0094 | TnpA, transposase (5' segment) | 27 | 56 | ||||||
CA_P0096 | ipyr Inorganic pyrophosphatase | 155 | 138.5 | ||||||
CA_P0097 | lipg Carboxyl esterase, a/b hydrolase | 462.5 | 400 | ||||||
CA_P0098 | amyA alpha-amylase | 47 | 48.5 | ||||||
CA_P0099 | muts DNA mismatch repair protein, MUTS fragment | 24.5 | 4 | ||||||
CA_P0100 | HTH transcriptional regulator TetR/AcrR family | 163.5 | 75 | ||||||
CA_P0101 | hypothetical protein | 205 | 73.5 | ||||||
CA_P0102 | Membrane protein | 1998 | 154 | ||||||
CA_P0103 | arsr Transcriptional regulator HTH-type, ArsR family | 141 | 36 | ||||||
CA_P0104 | arsb Heavy metal resistance membrane protein | 141 | 44 | ||||||
CA_P0105 | arsc Arsenate reductase, arsC, protein-tyrosine-phosphatase family enzyme | 141 | 54 | ||||||
CA_P0106 | dxs 1-deoxyxylulose-5-phosphate synthase, dehydrogenase | 18.5 | 28 | ||||||
CA_P0107 | HTH transcriptional regulator MerR family | 51.5 | 38 | ||||||
CA_P0108 | Predicted HTH containing transcriptional regulator | 114.5 | 76 | ||||||
CA_P0110 | NH2-acetyltransferase | 56 | 42 | ||||||
CA_P0112 | hypothetical protein | 4686.5 | 784.5 | ||||||
CA_P0113 | Solo B3/4 domain (OB-fold DNA/RNA-binding) of Phe-aaRS-beta | 658 | 591.5 | ||||||
CA_P0114 | Possible beta-xylosidase, family 43 of glycosyl hydrolases | 19 | 16 | ||||||
CA_P0115 | xynD Endo-1,4-beta-xylanase XynD B.subtilis ortholog (family 43 glycosyl hydrolase and cellulose-binding domain) | 9 | 4 | ||||||
CA_P0116 | Xylanase, glycosyl hydrolase family 10 | 224.5 | 53 | ||||||
CA_P0117 | Possible beta-xylosidase diverged, family 5/39 of glycosyl hydrolases and alpha-amylase C (Greek key) C-terminal domain | 339.5 | 45 | ||||||
CA_P0118 | Possible xylan degradation enzyme (glycosyl hydrolase family 30-like domain and Ricin B-like domain) | 262.5 | 27.5 | ||||||
CA_P0119 | Possible xylan degradation enzyme (glycosyl hydrolase family 30-like domain and Ricin B-like domain) | 224 | 17 | ||||||
CA_P0120 | Possible xylan degradation enzyme (glycosyl hydrolase family 43-like domain, cellulose-binding domain and Ricin B-like domain) | 199.5 | 15 | ||||||
CA_P0123 | hypothetical protein | 102 | 79.5 | ||||||
CA_P0124 | Permease, MDR related, probably tetracycline resistance protein | 1062.5 | 421 |