Selected Cell
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Read me_data
Transcriptome_data
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1. Array
2. Array
3. Array
4. Array
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Description: | This data-sheet reflects the transcriptome of C. acetobutylicum concerning the comparison of acidogenesis to solventogenesis. Genes with average fold regulation > 1.0 (significant > 3.0) showed elevated transcript level in the acidogenesis (pH 5.7) or repressed transcript level in the solventogenesis (pH 4.5), respectively. Genes were figured out as significant induced, if the average fold regulation was > 3.0 and at least three out of four micro arrays were > 2.0.Furthermore, genes with fold regulation < 1.0 (significant < 0.33) showed elevated transcript level in the solventogenesis (pH 4.5) or repressed transcript level in the acidogenesis (pH 5.7), respectively. Genes were figured out as significant induced, if the average fold regulation was < 0.33 and at least three out of four micro arrays were < 0.5. | ||||||||
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CAC2766 | Thiamine biosynthesis lipoprotein ApbE | 1.2845 | 1.4134275618374559 | 0.9944999999999999 | 1.2738853503184715 | 1.2415782280389818 | 0.17650861447921665 | ||
CAC2767 | hypothetical protein | 1.163 | 1.2953367875647668 | 1.5725 | 1.8214936247723135 | 1.46308260308427 | 0.2936090680442373 | ||
CAC2768 | Transcriptional regulators, AcrR family | 1.46 | 1.422475106685633 | 1.5825 | 1.1344299489506524 | 1.3998512639090714 | 0.18968284401880203 | ||
CAC2769 | ppiB Peptidyl-prolyl cis-transisomerase, cyclophilin family | 0.861 | 0.7072135785007071 | 0.877 | 0.7532956685499058 | 0.7996273117626531 | 0.08254303726896337 | ||
CAC2770 | Amino acid transporter | 0.5734999999999999 | 0.5908419497784343 | 0.9969999999999999 | 0.5343307507347047 | 0.6739181751282847 | 0.21668101264742845 | ||
CAC2771 | Amino acid transporter | 0.433 | 0.5417118093174431 | 0.6875 | 0.47687172150691465 | 0.5347708827060894 | 0.11118151100182366 | ||
CAC2772 | Permease | 1.086 | 1.1621150493898895 | 0.742 | 0.2642007926023778 | 0.8135789604980669 | 0.40932079797705934 | ||
CAC2775 | Phosphohydrolase from calcineurin family | 0.7055 | 0.9090909090909091 | 0.6495 | 0.5714285714285714 | 0.70887987012987 | 0.14435455440831305 | ||
CAC2777 | Glutaredoxin | 0.5455000000000001 | 0.4027386226339106 | 1.5270000000000001 | 0.4985044865403788 | 0.7434357772935724 | 0.5257430777548905 | ||
CAC2778 | Rubredoxin | 0.3555 | 0.41135335252982314 | 1.0495 | 0.6997900629811057 | 0.6290358538777322 | 0.3183309551550998 | ||
CAC2779 | hypothetical protein | 0.311 | 0.26688017080330934 | 1.936 | 0.6205398696866274 | 0.7836050101224842 | 0.784211814049084 | ||
CAC2781 | hypothetical protein | 0.5409999999999999 | 0.5104645227156713 | 1.089 | 1.0851871947911014 | 0.8064129293766932 | 0.3243455081783001 | ||
CAC2782 | Predicted permease | 1.1325 | 1.3377926421404682 | 0.054 | 0.1593879502709595 | 0.6709201481028569 | 0.658288321212753 | ||
CAC2784 | Signal peptidase type IV | 1.0775 | 1.048767697954903 | 0.732 | 0.6868131868131868 | 0.8862702211920226 | 0.20539122666031373 | ||
CAC2785 | hypothetical protein | 1.006 | 1.0520778537611783 | 0.838 | 0.6353240152477764 | 0.8828504672522386 | 0.18893087326259472 | ||
CAC2786 | Uncharacterized conserved protein, YQGV B,subtilis ortholog | 1.3094999999999999 | 1.044932079414838 | 1.416 | 0.6583278472679394 | 1.1071899816706943 | 0.33746418725095656 | ||
CAC2787 | Serine/threonine protein phosphatase | 1.252 | 1.1396011396011396 | 1.7025 | 1.3879250520471893 | 1.3705065479120822 | 0.2435050759230284 | ||
CAC2788 | Xaa-Pro aminopeptidase family enzyme | 1.1219999999999999 | 1.0357327809425168 | 2.7165 | 1.4641288433382136 | 1.5845904060701828 | 0.7769523566206503 | ||
CAC2789 | hypothetical protein | 1.0885 | 0.9975062344139651 | 2.2655000000000003 | 1.5117157974300832 | 1.4658055079610122 | 0.5782971240977075 | ||
CAC2791 | MoaA/NirJ family Fe-S oxidoreductase | 1.9385 | 1.9782393669634024 | 2.183406113537118 | 2.033381826833507 | 0.13143541863728322 | |||
CAC2797 | hypothetical protein | 0.6245 | 0.5865102639296187 | 1.0825 | 1.0770059235325793 | 0.8426290468655495 | 0.27425517712091746 | ||
CAC2798 | NADH flavin oxidoreductase | 0.9395 | 1.0183299389002036 | 1.813 | 1.9841269841269842 | 1.438739230756797 | 0.536501850610879 | ||
CAC2802 | Predicted phosphoglycerol transferase (alkaline phosphatase superfamily), YFNI B,subtilis | 0.9555 | 1.1682242990654206 | 0.669 | 1.1764705882352942 | 0.9922987218251786 | 0.2385688541882331 | ||
CAC2805 | Possible selenocysteine lyase (aminotransferase of NifS family) | 1.135 | 1.0989010989010988 | 2.1535 | 1.5564202334630348 | 1.4859553330910336 | 0.4911082061801432 | ||
CAC2806 | Predicted phosphohydrolase, Icc family | 1.329 | 1.2360939431396787 | 3.63 | 3.1847133757961785 | 2.344951829733964 | 1.2407352910204799 | ||
CAC2807 | Endo-1,3(4)-beta-glucanase family 16 | 2.0015 | 1.670843776106934 | 5.193 | 2.941176470588235 | 2.951630061673792 | 1.5881865047270538 | ||
CAC2808 | Beta-lactamase class C domain (PBPX family) containing protein | 0.5115000000000001 | 0.5069708491761724 | 0.7144999999999999 | 0.6470397929472662 | 0.5950026605308596 | 0.1028101347410931 | ||
CAC2810 | Possible glucoamylase (diverged), 15 family | 2.7385 | 2.1528525296017222 | 10.0755 | 4.938271604938271 | 4.976281033634998 | 3.6047603367163683 | ||
CAC2819 | murE UDP-N-acetylmuramyl tripeptide synthase, MURE | 1.6885 | 1.9065776930409915 | 1.419 | 2.028397565922921 | 1.7606188147409783 | 0.26765275499163166 | ||
CAC2823 | hypothetical protein | 1.064 | 0.8880994671403198 | 0.897 | 0.9496998223801066 | 0.09908684485970291 | |||
CAC2824 | N-terminal HKD family nuclease fused to DNA/RNA helicases of superfamily II,conserved in Streptomyces | 0.976 | 0.8639308855291576 | 2.298 | 1.0928961748633879 | 1.3077067650981364 | 0.6667809960470504 | ||
CAC2825 | hypothetical protein | 1.1885 | 0.8643042350907519 | 2.1995 | 1.021972406745018 | 1.3185691604589425 | 0.60201976359873 | ||
CAC2826 | Intracellular protease/amidase related enzyme (ThiJ family) | 1.2160000000000002 | 1.0050251256281406 | 2.695 | 1.444043321299639 | 1.5900171117319448 | 0.7581556468457665 | ||
CAC2827 | S-adenosylmethionine-dependent methyltransferase | 1.2825 | 1.2376237623762376 | 4.128500000000001 | 2.554278416347382 | 2.300725544680905 | 1.3628422723151568 | ||
CAC2828 | Nudix (MutT) family hydrolase/pyrophosphatase | 1.4325 | 1.2828736369467606 | 4.638 | 2.5284450063211126 | 2.4704546608169684 | 1.548043307291934 | ||
CAC2829 | Predicted membrane protein | 1.3595000000000002 | 1.4326647564469914 | 2.474 | 2.1052631578947367 | 1.842856978585432 | 0.5382348137724917 | ||
CAC2830 | Acylphosphatase, ACYP | 1.5190000000000001 | 1.048767697954903 | 3.036 | 1.7905102954341987 | 1.8485694983472754 | 0.8488543340781739 | ||
CAC2831 | Conserved membrane protein, YccA family | 1.2665 | 1.3157894736842106 | 0.5705 | 0.44622936189201245 | 0.8997547088940557 | 0.4552219011151288 | ||
CAC2832 | aspartate aminotransferase | 0.8494999999999999 | 0.9358914365933552 | 0.883 | 0.7806401249024199 | 0.8622578903739437 | 0.06500348105535994 | ||
CAC2836 | Zn-binding lipoprotein related (surface adhesin A), ADHS | 1.251 | 1.0598834128245893 | 1.5085 | 1.3708019191226868 | 1.2975463329868189 | 0.19019118036068897 | ||
CAC2838 | Predicted nucleotide-binding protein, YjeE family | 0.937 | 0.9220839096357768 | 2.2785 | 1.3157894736842106 | 1.363343345829997 | 0.6367238048509595 | ||
CAC2839 | Inactive homolog of metal-dependent protease, YDIC B,subtilis ortholog | 1.0745 | 0.984251968503937 | 2.475 | 1.5163002274450341 | 1.512513048987243 | 0.682473607261847 | ||
CAC2840 | Predicted acetyltransferase | 1.2069999999999999 | 0.9203865623561895 | 3.074 | 1.372683596431023 | 1.6435175396968031 | 0.9717847956059196 | ||
CAC2841 | Conserved membrane protein, probable transporter, YPAA B,subtilis ortholog | 0.6014999999999999 | 0.6793478260869565 | 0.126 | 0.1648804616652927 | 0.39293207193806234 | 0.28797849041081713 | ||
CAC2842 | Transcription accessory protein TEX, RNA-binding protein containing S1 domain | 0.938 | 0.7713073659853452 | 0.8240000000000001 | 0.7821666014861166 | 0.8288684918678654 | 0.0762184099771932 | ||
CAC2844 | galT Galactose-1-phosphate uridylyltransferase | 0.634 | 0.6559527714004592 | 0.5705 | 0.6504065040650406 | 0.6277148188663749 | 0.039265479072026634 | ||
CAC2845 | prfB peptide chain release factor 2 | 0.8145 | 0.7176175098672408 | 1.6795 | 0.7112375533428165 | 0.9807137658025143 | 0.46824718757473205 | ||
CAC2846 | secA translocase | 0.794 | 0.7936507936507936 | 1.7255 | 1.0245901639344261 | 1.0844352393963048 | 0.4410040372134269 | ||
CAC2847 | Ribosome-associated protein Y (PSrp-1) | 0.8945000000000001 | 0.7955449482895783 | 2.8305 | 1.1848341232227488 | 1.4263447678780816 | 0.9505694042501355 | ||
CAC2849 | Proline/glycine betaine ABC-type transport system, permease component fused to periplasmic component | 1.819 | 2.1551724137931036 | 0.942 | 1.1500862564692353 | 1.5165646675655846 | 0.5667797828848413 | ||
CAC2850 | Proline/glycine betaine ABC-type transport system, ATPase component | 1.586 | 1.699235344095157 | 1.492 | 1.3513513513513513 | 1.532146673861627 | 0.147329006558253 | ||
CAC2851 | GntR/FadR-family transcriptional regulator fused to conserved membrane protein (YHCF B,subtilis homolog) | 0.5585 | 0.6775067750677507 | 0.919 | 0.7380073800738007 | 0.7232535387853878 | 0.15030064076571475 | ||
CAC2852 | comFC Predicted amidophosphoribosyltransferase, ComFC B,suntilis ortholog | 0.9644999999999999 | 0.8025682182985554 | 2.059 | 1.4566642388929352 | 1.3206831142978728 | 0.5653648221359193 | ||
CAC2853 | hypothetical protein | 0.8335 | 0.8220304151253597 | 2.6315 | 1.457725947521866 | 1.4361890906618064 | 0.8504228408906845 | ||
CAC2854 | recD ATP-dependent exoDNAse (exonuclease V), alpha subunit, RecD | 0.987 | 0.8203445447087776 | 1.9905 | 1.2453300124533002 | 1.2607936392905195 | 0.516936120634087 | ||
CAC2855 | Predicted membrane protein | 0.8905000000000001 | 0.9416195856873822 | 1.159 | 1.146788990825688 | 1.0344771441282676 | 0.13840982230797 | ||
CAC2856 | metK S-adenosylmethionine synthetase | 1.367 | 1.3783597518952446 | 0.772 | 0.5534034311012729 | 1.0176907957491295 | 0.4195337651049465 | ||
CAC2858 | mreV Shape-determining protein envB (HSP70 family charepones) | 1.1844999999999999 | 1.2070006035003018 | 1.178 | 1.2650221378874131 | 1.2086306853469289 | 0.039594536435329564 | ||
CAC2863 | Predicted membrane protein | 0.9935 | 0.8920606601248885 | 0.6385000000000001 | 0.5920663114268798 | 0.7790317428879421 | 0.1944885710103849 | ||
CAC2864 | atpC FoF1-type ATP synthase epsilon subunit | 0.5854999999999999 | 0.5557099194220616 | 0.787 | 0.7336757153338225 | 0.665471408688971 | 0.11234476205670985 | ||
CAC2865 | atpD ATP synthase subunit B | 0.7275 | 0.7898894154818326 | 0.7335 | 0.7283321194464676 | 0.7448053837320752 | 0.03017298108396367 | ||
CAC2866 | atpG FoF1-type ATP synthase gamma subunit | 1.0059999999999998 | 0.7479431563201197 | 1.1785 | 0.5546311702717693 | 0.8717685816479722 | 0.275687691859869 | ||
CAC2867 | atpA ATP synthase subunit A | 0.842 | 0.7776049766718507 | 0.979 | 0.5950609937518595 | 0.7984164926059276 | 0.15947466190503423 | ||
CAC2868 | atpH ATP synthase subunit D | 1.0145 | 0.848536274925753 | 1.06 | 0.5284015852047556 | 0.8628594650326271 | 0.24078099975302988 | ||
CAC2869 | atpF FoF1-type ATP synthase B subunit | 0.929 | 0.7616146230007615 | 1.2085 | 0.5630630630630631 | 0.8655444215159562 | 0.273216345585317 | ||
CAC2870 | atpE FoF1-type ATP synthase C subunit | 1.0875 | 1.016260162601626 | 0.905 | 0.4964010920824026 | 0.8762903136710072 | 0.2641597729766065 | ||
CAC2871 | atpB ATP synthase subunit A | 0.7785 | 0.7686395080707148 | 0.848 | 0.42607584149978694 | 0.7053038373926255 | 0.18947256082248395 | ||
CAC2872 | Predicted membrane protein in FoF1-type ATP synthase operon | 1.407 | 1.4084507042253522 | 1.573 | 0.7633587786259541 | 1.2879523707128266 | 0.3583028394338312 | ||
CAC2873 | acetyl-CoA acetyltransferase | 2.2670000000000003 | 1.7241379310344829 | 8.075 | 3.508771929824561 | 3.893727465214761 | 2.8858616141045035 | ||
CAC2874 | UDP-N-acetylglucosamine 2-epimerase | 0.9155 | 0.8428150021070374 | 1.907 | 1.0781671159029649 | 1.1858705295025005 | 0.4907188796792719 | ||
CAC2875 | tagO Undecaprenyl-phosphate | 0.961 | 0.7704160246533127 | 1.9085 | 0.9823182711198428 | 1.155558573943289 | 0.5109210035361305 | ||
CAC2876 | Deoxycytidylate deaminase | 1.1565 | 0.9519276534983341 | 2.5564999999999998 | 1.278772378516624 | 1.4859250080037396 | 0.7263417551695283 | ||
CAC2877 | ABC-type iron (III) transport system, ATPase component | 0.9265 | 0.881445570736007 | 0.498 | 0.37362226788716607 | 0.6698919596557933 | 0.2756357456169032 | ||
CAC2878 | ABC-type iron (III) transport system, permease component | 0.8255 | 0.8488964346349746 | 0.489 | 0.46609182008855743 | 0.657372063680883 | 0.20807520359810952 | ||
CAC2879 | upp uracil phosphoribosyltransferase | 0.567 | 0.5991611743559018 | 2.0735 | 1.510574018126888 | 1.1875587981206976 | 0.7349683963999297 | ||
CAC2880 | ribose-5-phosphate isomerase B | 0.8045 | 0.6020469596628537 | 3.3925 | 1.4295925661186561 | 1.5571598814453775 | 1.2732483865045185 | ||
CAC2881 | Protein-tyrosine-phosphatase, YWLE B,subtilis ortholog | 0.66 | 0.7084661707403471 | 1.7454999999999998 | 1.3917884481558804 | 1.1264386547240568 | 0.5310095661653919 | ||
CAC2883 | Predicted membrane protein | 1.0805 | 1.0834236186348862 | 2.0275 | 1.448225923244026 | 1.409912385469728 | 0.44646381838030563 | ||
CAC2884 | prfA peptide chain release factor 1 | 1.371 | 1.145475372279496 | 2.355 | 1.2239902080783354 | 1.523866395089458 | 0.5619183504266836 | ||
CAC2885 | S-adenosylmethionine-dependent methyltransferase, HEMK ortholog | 1.07 | 0.9013068949977466 | 2.18 | 0.9601536245799327 | 1.27786512989442 | 0.605472801746462 | ||
CAC2886 | Uncharacterized conserved protein, predicted metal-dependent enzyme, YQHQ B,subtilis ortholog | 1.1110000000000002 | 1.0554089709762533 | 1.5545 | 0.8952551477170994 | 1.1540410296733383 | 0.2822046142152438 | ||
CAC2887 | tdk thymidine kinase | 0.9425 | 0.9029345372460498 | 1.3860000000000001 | 0.9583133684714903 | 1.0474369764293852 | 0.22690722213919937 | ||
CAC2888 | rpmE 50S ribosomal protein L31 | 0.8135 | 0.8496176720475785 | 1.608 | 1.2084592145015107 | 1.1198942216372725 | 0.3710426036377972 | ||
CAC2889 | rho transcription termination factor Rho | 1.039 | 0.9803921568627451 | 2.6254999999999997 | 2.134471718249733 | 1.6948409687781194 | 0.8164896221938842 | ||
CAC2891 | Fusion of alpha-glucosidase (family 31 glycosyl hydrolase) and glycosidase (TreA/MalS family) | 0.6245 | 0.6727211570803903 | 2.5540000000000003 | 2.0366598778004072 | 1.4719702587201995 | 0.9741094553143235 | ||
CAC2892 | ctrA CTP synthetase | 1.0765 | 0.9569377990430623 | 1.6219999999999999 | 1.3736263736263736 | 1.257266043167359 | 0.29969095323487965 | ||
CAC2894 | Uncharacterized protein, ywiB B,subtilis homolog | 1.0665 | 0.9699321047526672 | 2.7430000000000003 | 1.8331805682859759 | 1.653153168259661 | 0.8228262155245611 | ||
CAC2895 | ddlA D-alanine-D-alanine ligase | 1.1934999999999998 | 0.946073793755913 | 2.8305 | 1.4792899408284026 | 1.6123409336460788 | 0.8408237443176322 | ||
CAC2897 | Predicted UDP-glucuronosyltransferase, YPFP B/subtilis ortholog | 1.021 | 1.0116337885685383 | 1.4095 | 1.1527377521613833 | 1.1487178851824804 | 0.185407100258837 | ||
CAC2900 | splB Spore photoproduct lyase, SPL related protein | 0.9825 | 0.9182736455463728 | 1.12 | 1.2795905310300704 | 1.0750910441441108 | 0.1602099168917096 | ||
CAC2901 | Predicted membrane protein | 1.303 | 1.0298661174047374 | 1.7665000000000002 | 1.619433198380567 | 1.4296998289463263 | 0.3293189691058412 | ||
CAC2902 | ipk 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase | 1.1364999999999998 | 0.9246417013407305 | 2.3594999999999997 | 1.3183915622940015 | 1.434758315908683 | 0.6371460813946872 | ||
CAC2903 | LysM domain containing membrane protein | 2.494 | 2.894356005788712 | 1.937984496124031 | 2.4421135006375807 | 0.48029238255113127 | |||
CAC2904 | Uncharacterized protein, VEG B,subtilis ortholog | 0.954 | 0.9905894006934125 | 0.712 | 0.8074283407347599 | 0.866004435357043 | 0.12963173216916996 | ||
CAC2907 | Glycosyltransferase | 1.036 | 1.0655301012253595 | 0.919 | 1.6570008285004145 | 1.1693827324314436 | 0.331179328377174 | ||
CAC2912 | araN Sugar-binding periplasmic protein | 1.0185 | 0.7654037504783774 | 1.5035 | 1.3468013468013469 | 1.158551274319931 | 0.3309617541242207 | ||
CAC2913 | hypothetical protein | 1.7245 | 1.8832391713747645 | 1.1125 | 0.7217610970768675 | 1.360500067112908 | 0.5401369046815828 | ||
CAC2914 | panB Ketopantoate hydroxymethyltransferase | 2.1805 | 2.574002574002574 | 0.9944999999999999 | 0.7412898443291327 | 1.6225731045829268 | 0.8921204076830801 | ||
CAC2915 | panC Pantoate--beta-alanine ligase | 2.3045 | 2.557544757033248 | 0.948 | 0.7225433526011561 | 1.633147027408601 | 0.9316386062707247 | ||
CAC2916 | panD aspartate 1-decarboxylase precursor | 2.875 | 2.3781212841854935 | 1.0225 | 1.0341261633919339 | 1.8274368618943568 | 0.9447939947005387 |
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Description: | The single sheets contain the transcript amount of the genes for all four microarrays (sheet 1 to 4). The first biological experiment will be represented by the 1. and 2. array. The 3. and 4. array showed the transcript level of the second biological experiment. The 1. and 3. array the cDNA of pH 4.5 was labeled by Cy3 and pH 5.7 by Cy5, respectively. The 2. and 4. array contained the transcript level of the dyeflip (pH 4.5 Cy5 / pH 5.7 Cy3). Furthermore, the 1. and 2. array were evaluated under high scanning conditions and the 3. and 4. array under low scanning conditions. | ||||||||
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1. Array (high Scan) | pH 4.5 / Cy3 | ||||||||
ORF | Name | (F 635 median - B635) - B635 SD | (F 532 median - B532) - B532 SD | pH 5.7 / Cy5 | |||||
CA_P0002 | Transglutaminase-like predicted protease domain fused ChW-repeats and cell-adhesion domain | 373.5 | 279 | ||||||
CA_P0003 | Transglutaminase-like predicted protease domain fused to ChW-repeats and cell-adhesion domain | 266 | 109 | ||||||
CA_P0004 | Cysteine protease | 415.5 | 20426.5 | ||||||
CA_P0005 | Uncharacterized protein similar to Bacteriocin immunity protein of mesC/lccI/entI family | 340.5 | 101.5 | ||||||
CA_P0006 | GntR family HTH transcriptional regulator | 1748.5 | 1721 | ||||||
CA_P0007 | hypothetical protein | 1246 | 1028 | ||||||
CA_P0009 | Response regulator (CheY + HTH domains) | 445 | 1880 | ||||||
CA_P0010 | bgla Beta_glucosidase | 660 | 2242.5 | ||||||
CA_P0012 | pedb Pediocin immunity protein, PedB | 3038 | 3942 | ||||||
CA_P0013 | FAD dependent dehydrogenase | 1007.5 | 603 | ||||||
CA_P0014 | Protein tyrosine phosphatase II superfamily protein | 1855 | 1464.5 | ||||||
CA_P0015 | GLPQ related phosphodiesterase | 3905.5 | 3969 | ||||||
CA_P0018 | hypothetical protein | 63 | 32 | ||||||
CA_P0019 | grkc Spore germination protein, GRKC | 129 | 127.5 | ||||||
CA_P0020 | grka Spore germination protein, GRKA | 168 | 213.5 | ||||||
CA_P0024 | MarR family HTH transcriptional regulator | 95 | 81 | ||||||
CA_P0025 | pdc Pyruvate decarboxylase | 5988 | 5220.5 | ||||||
CA_P0026 | hypothetical protein | 5853.5 | 5351 | ||||||
CA_P0027 | Predicted amino acid permeases | 235.5 | 219.5 | ||||||
CA_P0028 | HTH transcriptional regulator TetR family | 657 | 496 | ||||||
CA_P0031 | hlyU Transcriptional activator HLYU, HTH of ArsR family | 458.5 | 346 | ||||||
CA_P0032 | Rhodanese-like domain | 257.5 | 247 | ||||||
CA_P0033 | hypothetical protein | 411.5 | 417.5 | ||||||
CA_P0034 | Rhodanese-like domain | 2115 | 2481 | ||||||
CA_P0035 | adhe Aldehyde-alcohol dehydrogenase, ADHE1 | 2648.5 | 850.5 | ||||||
CA_P0036 | Uncharacterized, ortholog of YgaT gene of B,subtillis | 46107.5 | 445 | ||||||
CA_P0037 | Uncharacterized, ortholog of YgaS gene of B,subtillis | 46444.5 | 354.5 | ||||||
CA_P0038 | Uncharacterized conserved protein, YCII family | 988.5 | 178.5 | ||||||
CA_P0040 | Xre family DNA-binding domain and TPR repeats containing protein | 403 | 1927.5 | ||||||
CA_P0044 | hypothetical protein | 208 | 1194.5 | ||||||
CA_P0045 | Glycosyl transferase | 356.5 | 1915 | ||||||
CA_P0046 | TetR family HTH transcriptional regulator | 78 | 135 | ||||||
CA_P0047 | Sulphohydrolase/Glycosulfatase, Zn-dependent hydrolase | 107 | 70 | ||||||
CA_P0048 | Related to methyl-accepting chemotaxis protein | 1133.5 | 688.5 | ||||||
CA_P0049 | Permease, MDR related | 166 | 147 | ||||||
CA_P0050 | pnba Para-nitrobenzyl esterase, a/b hydrolase | 1928.5 | 1907 | ||||||
CA_P0052 | MarR family HTH transcriptional regulator | 473.5 | 317 | ||||||
CA_P0053 | xynb Xylanase, glycosyl hydrolase family 10 | 311.5 | 5611 | ||||||
CA_P0054 | Xylanase/chitin deacetylase family enzyme | 439 | 7819.5 | ||||||
CA_P0055 | hypothetical protein | 294.5 | 241 | ||||||
CA_P0056 | pell Pectate lyase, secreted, polysaccharide lyase family | 434 | 4597 | ||||||
CA_P0057 | Putative glycoportein or S-layer protein | 684.5 | 1091.5 | ||||||
CA_P0058 | Rare lipoprotein A RLPA releated protein | 11422 | 9077.5 | ||||||
CA_P0059 | Alcohol dehydrogenase | 1053 | 982 | ||||||
CA_P0062 | Hypothetical protein, CF-18 family | 138.5 | 69 | ||||||
CA_P0064 | alf Fructose-bisphosphate aldolase class I | 85.5 | 76 | ||||||
CA_P0065 | Predicted secreted metalloprotease | 310 | 4875 | ||||||
CA_P0066 | ptna Mannose-specific phosphotransferase system component IIAB | 104.5 | 15 | ||||||
CA_P0067 | manY/levF Mannose/fructose-specific phosphotransferase system component IIC | 204 | 52 | ||||||
CA_P0072 | hypothetical protein | 5976.5 | 2992.5 | ||||||
CA_P0073 | ABC ATPase containing transporter | 2071.5 | 725 | ||||||
CA_P0074 | hypothetical protein | 1774 | 546 | ||||||
CA_P0076 | penicillin binding protein 1A | 928 | 564.5 | ||||||
CA_P0077 | Uncharacterized Fe-S protein | 142.5 | 71.5 | ||||||
CA_P0079 | thlr ThlR, HTH transcriptional regulator TetR/AcrR family | 2049.5 | 1822.5 | ||||||
CA_P0080 | Site-Specific Recombinase, Xerd | 292.5 | 297.5 | ||||||
CA_P0081 | TnpR resolvase C-terminal fragment | 224 | 161.5 | ||||||
CA_P0082 | crp CRP (cyclic AMP receptor protein) regulatory protein | 722.5 | 711.5 | ||||||
CA_P0083 | SAM-dependent methyltransferase | 1307.5 | 605 | ||||||
CA_P0084 | hypothetical protein | 1124 | 831 | ||||||
CA_P0085 | Hypothetical secreted protein (fragment) | 631.5 | 489 | ||||||
CA_P0086 | Permease, MDR related, probably tetracycline resistance protein | 635.5 | 606.5 | ||||||
CA_P0087 | HTH transcriptional regulator TetR/AcrR family | 3898.5 | 2437.5 | ||||||
CA_P0088 | abf 3-oxoacyl-acyl-carrier protein synthase | 1694 | 1179.5 | ||||||
CA_P0089 | Predicted membrane protein | 158 | 86 | ||||||
CA_P0090 | ABC-type transporter, ATPase component | 330 | 239 | ||||||
CA_P0091 | Predicted regulator of stationary/sporulation gene expression | 1641.5 | 1946 | ||||||
CA_P0093 | tnpa TnpA, transposase (3' segment) | 427.5 | 420.5 | ||||||
CA_P0094 | TnpA, transposase (5' segment) | 589.5 | 522.5 | ||||||
CA_P0096 | ipyr Inorganic pyrophosphatase | 820.5 | 1010.5 | ||||||
CA_P0097 | lipg Carboxyl esterase, a/b hydrolase | 2128 | 2506 | ||||||
CA_P0098 | amyA alpha-amylase | 295.5 | 261.5 | ||||||
CA_P0099 | muts DNA mismatch repair protein, MUTS fragment | 234 | 182.5 | ||||||
CA_P0100 | HTH transcriptional regulator TetR/AcrR family | 638 | 838 | ||||||
CA_P0101 | hypothetical protein | 742 | 1077.5 | ||||||
CA_P0102 | Membrane protein | 891.5 | 8260.5 | ||||||
CA_P0103 | arsr Transcriptional regulator HTH-type, ArsR family | 426 | 516 | ||||||
CA_P0104 | arsb Heavy metal resistance membrane protein | 212 | 334 | ||||||
CA_P0105 | arsc Arsenate reductase, arsC, protein-tyrosine-phosphatase family enzyme | 259 | 556 | ||||||
CA_P0107 | HTH transcriptional regulator MerR family | 301.5 | 233.5 | ||||||
CA_P0108 | Predicted HTH containing transcriptional regulator | 861 | 780 | ||||||
CA_P0110 | NH2-acetyltransferase | 372.5 | 235 | ||||||
CA_P0111 | NH2-acetyltransferase | 167 | 37 | ||||||
CA_P0112 | hypothetical protein | 3320.5 | 12481.5 | ||||||
CA_P0113 | Solo B3/4 domain (OB-fold DNA/RNA-binding) of Phe-aaRS-beta | 3682 | 3518.5 | ||||||
CA_P0114 | Possible beta-xylosidase, family 43 of glycosyl hydrolases | 97 | 252.5 | ||||||
CA_P0115 | xynD Endo-1,4-beta-xylanase XynD B,subtilis ortholog (family 43 glycosyl hydrolase and cellulose-binding domain) | 3 | 99 | ||||||
CA_P0116 | Xylanase, glycosyl hydrolase family 10 | 253.5 | 1616 | ||||||
CA_P0117 | Possible beta-xylosidase diverged, family 5/39 of glycosyl hydrolases and alpha-amylase C (Greek key) C-terminal domain | 181.5 | 1570.5 | ||||||
CA_P0118 | Possible xylan degradation enzyme (glycosyl hydrolase family 30-like domain and Ricin B-like domain) | 194 | 1459 | ||||||
CA_P0119 | Possible xylan degradation enzyme (glycosyl hydrolase family 30-like domain and Ricin B-like domain) | 78 | 1033.5 | ||||||
CA_P0120 | Possible xylan degradation enzyme (glycosyl hydrolase family 43-like domain, cellulose-binding domain and Ricin B-like domain) | 96 | 1150.5 | ||||||
CA_P0121 | Leu-rich protein family protein, YaeG (E,coli) homolog | 23 | 67 | ||||||
CA_P0123 | hypothetical protein | 597.5 | 758.5 | ||||||
CA_P0124 | Permease, MDR related, probably tetracycline resistance protein | 1910 | 2061.5 | ||||||
CA_P0125 | hypothetical protein | 1040 | 703.5 | ||||||
CA_P0126 | Uncharacterized protein (NN,term domain homologous to B,subtilis (gi|833839) | 2070 | 1554 | ||||||
CA_P0127 | HTH transcriptional regulator TetR family | 393 | 205 |
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2. array (high scan) | pH 4.5 / Cy5 | ||||||||||
ORF | Name | (F 635 median - B635) - B635 SD | (F 532 median - B532) - B532 SD | pH 5.7 / Cy3 | |||||||
CA_P0001 | Oxidoreductase | 89 | 117 | ||||||||
CA_P0002 | Transglutaminase-like predicted protease domain fused ChW-repeats and cell-adhesion domain | 279 | 286 | ||||||||
CA_P0003 | Transglutaminase-like predicted protease domain fused to ChW-repeats and cell-adhesion domain | 155.5 | 237.5 | ||||||||
CA_P0004 | Cysteine protease | 16476 | 271 | ||||||||
CA_P0005 | Uncharacterized protein similar to Bacteriocin immunity protein of mesC/lccI/entI family | 162.5 | 229.5 | ||||||||
CA_P0006 | GntR family HTH transcriptional regulator | 1599 | 1544 | ||||||||
CA_P0007 | hypothetical protein | 957.5 | 1054 | ||||||||
CA_P0009 | Response regulator (CheY + HTH domains) | 3064 | 814.5 | ||||||||
CA_P0010 | bgla Beta_glucosidase | 2148.5 | 642.5 | ||||||||
CA_P0012 | pedb Pediocin immunity protein, PedB | 3817.5 | 2461.5 | ||||||||
CA_P0013 | FAD dependent dehydrogenase | 664 | 744.5 | ||||||||
CA_P0014 | Protein tyrosine phosphatase II superfamily protein | 1588 | 1583.5 | ||||||||
CA_P0015 | GLPQ related phosphodiesterase | 3664 | 3275 | ||||||||
CA_P0019 | grkc Spore germination protein, GRKC | 116 | 94 | ||||||||
CA_P0020 | grka Spore germination protein, GRKA | 201 | 85 | ||||||||
CA_P0021 | hypothetical protein | 19 | 32 | ||||||||
CA_P0023 | hypothetical protein | 44 | 49 | ||||||||
CA_P0024 | MarR family HTH transcriptional regulator | 106.5 | 118 | ||||||||
CA_P0025 | pdc Pyruvate decarboxylase | 5205.5 | 5797 | ||||||||
CA_P0026 | hypothetical protein | 5122 | 5912 | ||||||||
CA_P0027 | Predicted amino acid permeases | 206.5 | 114.5 | ||||||||
CA_P0028 | HTH transcriptional regulator TetR family | 468 | 431.5 | ||||||||
CA_P0031 | hlyU Transcriptional activator HLYU, HTH of ArsR family | 406.5 | 375 | ||||||||
CA_P0032 | Rhodanese-like domain | 228.5 | 167.5 | ||||||||
CA_P0033 | hypothetical protein | 399.5 | 297 | ||||||||
CA_P0034 | Rhodanese-like domain | 2499 | 1767.5 | ||||||||
CA_P0035 | adhe Aldehyde-alcohol dehydrogenase, ADHE1 | 814.5 | 2786.5 | ||||||||
CA_P0036 | Uncharacterized, ortholog of YgaT gene of B,subtillis | 3232.5 | 60284.5 | ||||||||
CA_P0037 | Uncharacterized, ortholog of YgaS gene of B,subtillis | 1103.5 | 61929.5 | ||||||||
CA_P0038 | Uncharacterized conserved protein, YCII family | 171.5 | 622 | ||||||||
CA_P0040 | Xre family DNA-binding domain and TPR repeats containing protein | 1605.5 | 255 | ||||||||
CA_P0044 | hypothetical protein | 1393 | 187 | ||||||||
CA_P0045 | Glycosyl transferase | 1757 | 261.5 | ||||||||
CA_P0046 | TetR family HTH transcriptional regulator | 157 | 7 | ||||||||
CA_P0047 | Sulphohydrolase/Glycosulfatase, Zn-dependent hydrolase | 107 | 76.5 | ||||||||
CA_P0048 | Related to methyl-accepting chemotaxis protein | 601 | 1031.5 | ||||||||
CA_P0049 | Permease, MDR related | 211.5 | 152.5 | ||||||||
CA_P0050 | pnba Para-nitrobenzyl esterase, a/b hydrolase | 2205 | 2468 | ||||||||
CA_P0051 | Oxidoreductase | 98.5 | 62.5 | ||||||||
CA_P0052 | MarR family HTH transcriptional regulator | 259.5 | 354 | ||||||||
CA_P0053 | xynb Xylanase, glycosyl hydrolase family 10 | 4608.5 | 241.5 | ||||||||
CA_P0054 | Xylanase/chitin deacetylase family enzyme | 6967 | 350 | ||||||||
CA_P0055 | hypothetical protein | 249 | 196 | ||||||||
CA_P0056 | pell Pectate lyase, secreted, polysaccharide lyase family | 4865 | 396 | ||||||||
CA_P0057 | Putative glycoportein or S-layer protein | 1320.5 | 688 | ||||||||
CA_P0058 | Rare lipoprotein A RLPA releated protein | 8917 | 10583 | ||||||||
CA_P0059 | Alcohol dehydrogenase | 837 | 775.5 | ||||||||
CA_P0062 | Hypothetical protein, CF-18 family | 151 | 123.5 | ||||||||
CA_P0064 | alf Fructose-bisphosphate aldolase class I | 124 | 32.5 | ||||||||
CA_P0065 | Predicted secreted metalloprotease | 4264.5 | 229.5 | ||||||||
CA_P0066 | ptna Mannose-specific phosphotransferase system component IIAB | 38 | 51 | ||||||||
CA_P0067 | manY/levF Mannose/fructose-specific phosphotransferase system component IIC | 69.5 | 159.5 | ||||||||
CA_P0072 | hypothetical protein | 2581 | 5461.5 | ||||||||
CA_P0073 | ABC ATPase containing transporter | 701 | 1729.5 | ||||||||
CA_P0074 | hypothetical protein | 599.5 | 1349 | ||||||||
CA_P0076 | penicillin binding protein 1A | 530.5 | 935.5 | ||||||||
CA_P0078 | thil Acetyl coenzyme A acetyltransferase (thiolase) | 259.5 | 283.5 | ||||||||
CA_P0079 | thlr ThlR, HTH transcriptional regulator TetR/AcrR family | 1417.5 | 1399.5 | ||||||||
CA_P0080 | Site-Specific Recombinase, Xerd | 300 | 254 | ||||||||
CA_P0081 | TnpR resolvase C-terminal fragment | 136 | 109 | ||||||||
CA_P0082 | crp CRP (cyclic AMP receptor protein) regulatory protein | 740.5 | 617.5 | ||||||||
CA_P0083 | SAM-dependent methyltransferase | 708.5 | 1280.5 | ||||||||
CA_P0084 | hypothetical protein | 887.5 | 1064 | ||||||||
CA_P0085 | Hypothetical secreted protein (fragment) | 474.5 | 507 | ||||||||
CA_P0086 | Permease, MDR related, probably tetracycline resistance protein | 605.5 | 584 | ||||||||
CA_P0087 | HTH transcriptional regulator TetR/AcrR family | 2460 | 3028.5 | ||||||||
CA_P0088 | abf 3-oxoacyl-acyl-carrier protein synthase | 1536.5 | 1659.5 | ||||||||
CA_P0089 | Predicted membrane protein | 134 | 123 | ||||||||
CA_P0090 | ABC-type transporter, ATPase component | 167.5 | 214.5 | ||||||||
CA_P0091 | Predicted regulator of stationary/sporulation gene expression | 2159 | 1306 | ||||||||
CA_P0093 | tnpa TnpA, transposase (3' segment) | 385.5 | 425.5 | ||||||||
CA_P0094 | TnpA, transposase (5' segment) | 464.5 | 407.5 | ||||||||
CA_P0096 | ipyr Inorganic pyrophosphatase | 959 | 746 | ||||||||
CA_P0097 | lipg Carboxyl esterase, a/b hydrolase | 2062.5 | 1594 | ||||||||
CA_P0098 | amyA alpha-amylase | 297 | 309 | ||||||||
CA_P0099 | muts DNA mismatch repair protein, MUTS fragment | 211 | 148 | ||||||||
CA_P0100 | HTH transcriptional regulator TetR/AcrR family | 942 | 583 | ||||||||
CA_P0101 | hypothetical protein | 1041.5 | 599.5 | ||||||||
CA_P0102 | Membrane protein | 8135.5 | 733 | ||||||||
CA_P0103 | arsr Transcriptional regulator HTH-type, ArsR family | 587 | 263.5 | ||||||||
CA_P0104 | arsb Heavy metal resistance membrane protein | 468.5 | 269 | ||||||||
CA_P0105 | arsc Arsenate reductase, arsC, protein-tyrosine-phosphatase family enzyme | 463 | 214 | ||||||||
CA_P0106 | dxs 1-deoxyxylulose-5-phosphate synthase, dehydrogenase | 107 | 109 | ||||||||
CA_P0108 | Predicted HTH containing transcriptional regulator | 782.5 | 600 | ||||||||
CA_P0110 | NH2-acetyltransferase | 226 | 274 | ||||||||
CA_P0111 | NH2-acetyltransferase | 52 | 152 | ||||||||
CA_P0112 | hypothetical protein | 11961.5 | 2907 | ||||||||
CA_P0113 | Solo B3/4 domain (OB-fold DNA/RNA-binding) of Phe-aaRS-beta | 3998.5 | 2880.5 | ||||||||
CA_P0114 | Possible beta-xylosidase, family 43 of glycosyl hydrolases | 293.5 | 65 | ||||||||
CA_P0116 | Xylanase, glycosyl hydrolase family 10 | 2110.5 | 306 | ||||||||
CA_P0117 | Possible beta-xylosidase diverged, family 5/39 of glycosyl hydrolases and alpha-amylase C (Greek key) C-terminal domain | 1687 | 154 | ||||||||
CA_P0118 | Possible xylan degradation enzyme (glycosyl hydrolase family 30-like domain and Ricin B-like domain) | 1520 | 203 | ||||||||
CA_P0119 | Possible xylan degradation enzyme (glycosyl hydrolase family 30-like domain and Ricin B-like domain) | 797.5 | 16 | ||||||||
CA_P0120 | Possible xylan degradation enzyme (glycosyl hydrolase family 43-like domain, cellulose-binding domain and Ricin B-like domain) | 1005 | 35 | ||||||||
CA_P0122 | dTDP-4-keto-L-rhamnose reductase | 11 | 20 | ||||||||
CA_P0123 | hypothetical protein | 833 | 555.5 | ||||||||
CA_P0124 | Permease, MDR related, probably tetracycline resistance protein | 2063.5 | 1624 | ||||||||
CA_P0125 | hypothetical protein | 693.5 | 846.5 |
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3. array (low scan) | pH 4.5 / Cy3 | ||||||||
ORF | Name | (F 635 median - B635) - B635 SD | (F 532 median - B532) - B532 SD | pH 5.7 / Cy5 | |||||
CA_P0002 | Transglutaminase-like predicted protease domain fused ChW-repeats and cell-adhesion domain | 106.5 | 14.5 | ||||||
CA_P0003 | Transglutaminase-like predicted protease domain fused to ChW-repeats and cell-adhesion domain | 64 | 10 | ||||||
CA_P0004 | Cysteine protease | 167.5 | 4352 | ||||||
CA_P0005 | Uncharacterized protein similar to Bacteriocin immunity protein of mesC/lccI/entI family | 50 | 62.5 | ||||||
CA_P0006 | GntR family HTH transcriptional regulator | 326.5 | 314 | ||||||
CA_P0007 | hypothetical protein | 523.5 | 311 | ||||||
CA_P0009 | Response regulator (CheY + HTH domains) | 197 | 376 | ||||||
CA_P0010 | bgla Beta_glucosidase | 181 | 522.5 | ||||||
CA_P0012 | pedb Pediocin immunity protein, PedB | 1352.5 | 1527.5 | ||||||
CA_P0013 | FAD dependent dehydrogenase | 232.5 | 107.5 | ||||||
CA_P0014 | Protein tyrosine phosphatase II superfamily protein | 534 | 238.5 | ||||||
CA_P0015 | GLPQ related phosphodiesterase | 725.5 | 1011.5 | ||||||
CA_P0018 | hypothetical protein | 9 | 7 | ||||||
CA_P0019 | grkc Spore germination protein, GRKC | 22.5 | 27.5 | ||||||
CA_P0020 | grka Spore germination protein, GRKA | 52 | 85.5 | ||||||
CA_P0025 | pdc Pyruvate decarboxylase | 1341 | 601.5 | ||||||
CA_P0026 | hypothetical protein | 1107 | 650 | ||||||
CA_P0027 | Predicted amino acid permeases | 20.5 | 54 | ||||||
CA_P0028 | HTH transcriptional regulator TetR family | 130 | 41 | ||||||
CA_P0031 | hlyU Transcriptional activator HLYU, HTH of ArsR family | 107 | 77.5 | ||||||
CA_P0032 | Rhodanese-like domain | 42.5 | 10.5 | ||||||
CA_P0033 | hypothetical protein | 105 | 71 | ||||||
CA_P0034 | Rhodanese-like domain | 519 | 591 | ||||||
CA_P0035 | adhe Aldehyde-alcohol dehydrogenase, ADHE1 | 324 | 81 | ||||||
CA_P0036 | Uncharacterized, ortholog of YgaT gene of B.subtillis | 36982.5 | 101.5 | ||||||
CA_P0037 | Uncharacterized, ortholog of YgaS gene of B.subtillis | 27184.5 | 32 | ||||||
CA_P0038 | Uncharacterized conserved protein, YCII family | 153.5 | 22 | ||||||
CA_P0044 | hypothetical protein | 76.5 | 268.5 | ||||||
CA_P0045 | Glycosyl transferase | 84 | 377 | ||||||
CA_P0046 | TetR family HTH transcriptional regulator | 10 | 25 | ||||||
CA_P0047 | Sulphohydrolase/Glycosulfatase, Zn-dependent hydrolase | 31 | 19 | ||||||
CA_P0048 | Related to methyl-accepting chemotaxis protein | 248 | 125.5 | ||||||
CA_P0049 | Permease, MDR related | 33.5 | 69.5 | ||||||
CA_P0050 | pnba Para-nitrobenzyl esterase, a/b hydrolase | 471 | 327.5 | ||||||
CA_P0051 | Oxidoreductase | 37 | 32.5 | ||||||
CA_P0052 | MarR family HTH transcriptional regulator | 28 | 42 | ||||||
CA_P0053 | xynb Xylanase, glycosyl hydrolase family 10 | 102.5 | 2182 | ||||||
CA_P0054 | Xylanase/chitin deacetylase family enzyme | 150 | 2618.5 | ||||||
CA_P0055 | hypothetical protein | 102 | 218.5 | ||||||
CA_P0056 | pell Pectate lyase, secreted, polysaccharide lyase family | 140 | 904 | ||||||
CA_P0057 | Putative glycoportein or S-layer protein | 554.5 | 373.5 | ||||||
CA_P0058 | Rare lipoprotein A RLPA releated protein | 2633.5 | 1793.5 | ||||||
CA_P0059 | Alcohol dehydrogenase | 181.5 | 176 | ||||||
CA_P0061 | hypothetical protein | 18 | 11 | ||||||
CA_P0062 | Hypothetical protein, CF-18 family | 42 | 7.5 | ||||||
CA_P0065 | Predicted secreted metalloprotease | 112.5 | 1834.5 | ||||||
CA_P0066 | ptna Mannose-specific phosphotransferase system component IIAB | 46 | 6 | ||||||
CA_P0067 | manY/levF Mannose/fructose-specific phosphotransferase system component IIC | 40.5 | 7 | ||||||
CA_P0070 | HAD phosphatase superfamily protein | 5 | 16 | ||||||
CA_P0072 | hypothetical protein | 2495 | 384.5 | ||||||
CA_P0073 | ABC ATPase containing transporter | 1289.5 | 145 | ||||||
CA_P0074 | hypothetical protein | 1090.5 | 105.5 | ||||||
CA_P0076 | penicillin binding protein 1A | 320 | 106 | ||||||
CA_P0077 | Uncharacterized Fe-S protein | 4 | 2 | ||||||
CA_P0078 | thil Acetyl coenzyme A acetyltransferase (thiolase) | 66.5 | 29.5 | ||||||
CA_P0079 | thlr ThlR, HTH transcriptional regulator TetR/AcrR family | 267 | 76.5 | ||||||
CA_P0080 | Site-Specific Recombinase, Xerd | 67 | 52.5 | ||||||
CA_P0082 | crp CRP (cyclic AMP receptor protein) regulatory protein | 122.5 | 188 | ||||||
CA_P0083 | SAM-dependent methyltransferase | 365 | 90.5 | ||||||
CA_P0084 | hypothetical protein | 260 | 168.5 | ||||||
CA_P0085 | Hypothetical secreted protein (fragment) | 138.5 | 105 | ||||||
CA_P0086 | Permease, MDR related, probably tetracycline resistance protein | 296.5 | 203.5 | ||||||
CA_P0087 | HTH transcriptional regulator TetR/AcrR family | 853.5 | 930 | ||||||
CA_P0088 | abf 3-oxoacyl-acyl-carrier protein synthase | 941.5 | 1379.5 | ||||||
CA_P0089 | Predicted membrane protein | 36.5 | 80.5 | ||||||
CA_P0090 | ABC-type transporter, ATPase component | 66 | 128.5 | ||||||
CA_P0091 | Predicted regulator of stationary/sporulation gene expression | 257.5 | 291.5 | ||||||
CA_P0093 | tnpa TnpA, transposase (3' segment) | 98.5 | 66.5 | ||||||
CA_P0094 | TnpA, transposase (5' segment) | 104.5 | 29 | ||||||
CA_P0096 | ipyr Inorganic pyrophosphatase | 204 | 129 | ||||||
CA_P0097 | lipg Carboxyl esterase, a/b hydrolase | 671.5 | 391 | ||||||
CA_P0098 | amyA alpha-amylase | 81 | 36.5 | ||||||
CA_P0099 | muts DNA mismatch repair protein, MUTS fragment | 11 | 11 | ||||||
CA_P0100 | HTH transcriptional regulator TetR/AcrR family | 85 | 189.5 | ||||||
CA_P0101 | hypothetical protein | 58.5 | 158.5 | ||||||
CA_P0102 | Membrane protein | 197.5 | 1702 | ||||||
CA_P0103 | arsr Transcriptional regulator HTH-type, ArsR family | 68.5 | 77.5 | ||||||
CA_P0104 | arsb Heavy metal resistance membrane protein | 72.5 | 117.5 | ||||||
CA_P0105 | arsc Arsenate reductase, arsC, protein-tyrosine-phosphatase family enzyme | 81 | 195 | ||||||
CA_P0106 | dxs 1-deoxyxylulose-5-phosphate synthase, dehydrogenase | 27 | 15 | ||||||
CA_P0107 | HTH transcriptional regulator MerR family | 50 | 36.5 | ||||||
CA_P0108 | Predicted HTH containing transcriptional regulator | 111 | 105.5 | ||||||
CA_P0110 | NH2-acetyltransferase | 52.5 | 66.5 | ||||||
CA_P0111 | NH2-acetyltransferase | 15 | 23.5 | ||||||
CA_P0112 | hypothetical protein | 838.5 | 4584.5 | ||||||
CA_P0113 | Solo B3/4 domain (OB-fold DNA/RNA-binding) of Phe-aaRS-beta | 990.5 | 461.5 | ||||||
CA_P0114 | Possible beta-xylosidase, family 43 of glycosyl hydrolases | 36 | 37.5 | ||||||
CA_P0116 | Xylanase, glycosyl hydrolase family 10 | 59 | 217 | ||||||
CA_P0117 | Possible beta-xylosidase diverged, family 5/39 of glycosyl hydrolases and alpha-amylase C (Greek key) C-terminal domain | 55 | 251.5 | ||||||
CA_P0118 | Possible xylan degradation enzyme (glycosyl hydrolase family 30-like domain and Ricin B-like domain) | 38 | 244 | ||||||
CA_P0119 | Possible xylan degradation enzyme (glycosyl hydrolase family 30-like domain and Ricin B-like domain) | 24.5 | 189.5 | ||||||
CA_P0120 | Possible xylan degradation enzyme (glycosyl hydrolase family 43-like domain, cellulose-binding domain and Ricin B-like domain) | 28 | 211.5 | ||||||
CA_P0121 | Leu-rich protein family protein, YaeG (E.coli) homolog | 1 | 7 | ||||||
CA_P0123 | hypothetical protein | 127.5 | 96 | ||||||
CA_P0124 | Permease, MDR related, probably tetracycline resistance protein | 507 | 909.5 | ||||||
CA_P0125 | hypothetical protein | 223 | 119 | ||||||
CA_P0126 | Uncharacterized protein (NN.term domain homologous to B.subtilis (gi|833839) | 271 | 159 | ||||||
CA_P0127 | HTH transcriptional regulator TetR family | 62 | 29 |
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4. array (low scan) | pH 4.5 / Cy5 | ||||||||
ORF | Name | (F 635 median - B635) - B635 SD | (F 532 median - B532) - B532 SD | pH 5.7 / Cy3 | |||||
CA_P0002 | Transglutaminase-like predicted protease domain fused ChW-repeats and cell-adhesion domain | 16.5 | 45 | ||||||
CA_P0003 | Transglutaminase-like predicted protease domain fused to ChW-repeats and cell-adhesion domain | 8.5 | 28.5 | ||||||
CA_P0004 | Cysteine protease | 3907 | 131.5 | ||||||
CA_P0005 | Uncharacterized protein similar to Bacteriocin immunity protein of mesC/lccI/entI family | 102 | 33 | ||||||
CA_P0006 | GntR family HTH transcriptional regulator | 269.5 | 312 | ||||||
CA_P0007 | hypothetical protein | 159.5 | 180 | ||||||
CA_P0009 | Response regulator (CheY + HTH domains) | 596 | 133.5 | ||||||
CA_P0010 | bgla Beta_glucosidase | 508.5 | 160 | ||||||
CA_P0012 | pedb Pediocin immunity protein, PedB | 2200 | 842 | ||||||
CA_P0013 | FAD dependent dehydrogenase | 190.5 | 138 | ||||||
CA_P0014 | Protein tyrosine phosphatase II superfamily protein | 389.5 | 371.5 | ||||||
CA_P0015 | GLPQ related phosphodiesterase | 1249.5 | 475.5 | ||||||
CA_P0017 | grkb1 Spore germination protein, GRKB | 10 | 3 | ||||||
CA_P0019 | grkc Spore germination protein, GRKC | 43.5 | 12 | ||||||
CA_P0020 | grka Spore germination protein, GRKA | 88 | 31.5 | ||||||
CA_P0021 | hypothetical protein | 13 | 7 | ||||||
CA_P0023 | hypothetical protein | 3 | 12 | ||||||
CA_P0025 | pdc Pyruvate decarboxylase | 788.5 | 1078.5 | ||||||
CA_P0026 | hypothetical protein | 602 | 485 | ||||||
CA_P0027 | Predicted amino acid permeases | 61 | 28.5 | ||||||
CA_P0028 | HTH transcriptional regulator TetR family | 83 | 92 | ||||||
CA_P0031 | hlyU Transcriptional activator HLYU, HTH of ArsR family | 80.5 | 69 | ||||||
CA_P0032 | Rhodanese-like domain | 21 | 17 | ||||||
CA_P0033 | hypothetical protein | 87.5 | 59 | ||||||
CA_P0034 | Rhodanese-like domain | 636 | 396.5 | ||||||
CA_P0035 | adhe Aldehyde-alcohol dehydrogenase, ADHE1 | 87 | 243 | ||||||
CA_P0036 | Uncharacterized, ortholog of YgaT gene of B.subtillis | 258 | 54827.5 | ||||||
CA_P0037 | Uncharacterized, ortholog of YgaS gene of B.subtillis | 76 | 28223 | ||||||
CA_P0038 | Uncharacterized conserved protein, YCII family | 30.5 | 108.5 | ||||||
CA_P0040 | Xre family DNA-binding domain and TPR repeats containing protein | 233 | 48 | ||||||
CA_P0044 | hypothetical protein | 290 | 37.5 | ||||||
CA_P0045 | Glycosyl transferase | 329 | 25 | ||||||
CA_P0046 | TetR family HTH transcriptional regulator | 12 | 7 | ||||||
CA_P0047 | Sulphohydrolase/Glycosulfatase, Zn-dependent hydrolase | 29 | 18 | ||||||
CA_P0048 | Related to methyl-accepting chemotaxis protein | 124.5 | 173.5 | ||||||
CA_P0049 | Permease, MDR related | 120.5 | 25.5 | ||||||
CA_P0050 | pnba Para-nitrobenzyl esterase, a/b hydrolase | 338 | 427.5 | ||||||
CA_P0051 | Oxidoreductase | 38.5 | 21.5 | ||||||
CA_P0052 | MarR family HTH transcriptional regulator | 58 | 24 | ||||||
CA_P0053 | xynb Xylanase, glycosyl hydrolase family 10 | 1977.5 | 82.5 | ||||||
CA_P0054 | Xylanase/chitin deacetylase family enzyme | 3082.5 | 98 | ||||||
CA_P0055 | hypothetical protein | 221.5 | 75.5 | ||||||
CA_P0056 | pell Pectate lyase, secreted, polysaccharide lyase family | 1006 | 88.5 | ||||||
CA_P0057 | Putative glycoportein or S-layer protein | 455 | 399.5 | ||||||
CA_P0058 | Rare lipoprotein A RLPA releated protein | 1842 | 2759.5 | ||||||
CA_P0059 | Alcohol dehydrogenase | 146 | 155.5 | ||||||
CA_P0061 | hypothetical protein | 1 | 10 | ||||||
CA_P0062 | Hypothetical protein, CF-18 family | 12.5 | 22 | ||||||
CA_P0064 | alf Fructose-bisphosphate aldolase class I | 6.5 | 7 | ||||||
CA_P0065 | Predicted secreted metalloprotease | 1836 | 93 | ||||||
CA_P0066 | ptna Mannose-specific phosphotransferase system component IIAB | 2 | 21 | ||||||
CA_P0067 | manY/levF Mannose/fructose-specific phosphotransferase system component IIC | 3 | 30 | ||||||
CA_P0072 | hypothetical protein | 584 | 1204 | ||||||
CA_P0073 | ABC ATPase containing transporter | 153.5 | 339.5 | ||||||
CA_P0074 | hypothetical protein | 154.5 | 348.5 | ||||||
CA_P0076 | penicillin binding protein 1A | 119.5 | 179.5 | ||||||
CA_P0077 | Uncharacterized Fe-S protein | 3.5 | 8.5 | ||||||
CA_P0078 | thil Acetyl coenzyme A acetyltransferase (thiolase) | 31 | 76.5 | ||||||
CA_P0079 | thlr ThlR, HTH transcriptional regulator TetR/AcrR family | 122.5 | 172.5 | ||||||
CA_P0080 | Site-Specific Recombinase, Xerd | 51 | 42 | ||||||
CA_P0081 | TnpR resolvase C-terminal fragment | 22 | 24 | ||||||
CA_P0082 | crp CRP (cyclic AMP receptor protein) regulatory protein | 249 | 92 | ||||||
CA_P0083 | SAM-dependent methyltransferase | 117.5 | 286 | ||||||
CA_P0084 | hypothetical protein | 210 | 219.5 | ||||||
CA_P0085 | Hypothetical secreted protein (fragment) | 120.5 | 101.5 | ||||||
CA_P0086 | Permease, MDR related, probably tetracycline resistance protein | 223 | 257 | ||||||
CA_P0087 | HTH transcriptional regulator TetR/AcrR family | 1078.5 | 746.5 | ||||||
CA_P0088 | abf 3-oxoacyl-acyl-carrier protein synthase | 1604 | 935.5 | ||||||
CA_P0089 | Predicted membrane protein | 110 | 40 | ||||||
CA_P0090 | ABC-type transporter, ATPase component | 133 | 72 | ||||||
CA_P0091 | Predicted regulator of stationary/sporulation gene expression | 554 | 199 | ||||||
CA_P0093 | tnpa TnpA, transposase (3' segment) | 54 | 75 | ||||||
CA_P0094 | TnpA, transposase (5' segment) | 27 | 56 | ||||||
CA_P0096 | ipyr Inorganic pyrophosphatase | 155 | 138.5 | ||||||
CA_P0097 | lipg Carboxyl esterase, a/b hydrolase | 462.5 | 400 | ||||||
CA_P0098 | amyA alpha-amylase | 47 | 48.5 | ||||||
CA_P0099 | muts DNA mismatch repair protein, MUTS fragment | 24.5 | 4 | ||||||
CA_P0100 | HTH transcriptional regulator TetR/AcrR family | 163.5 | 75 | ||||||
CA_P0101 | hypothetical protein | 205 | 73.5 | ||||||
CA_P0102 | Membrane protein | 1998 | 154 | ||||||
CA_P0103 | arsr Transcriptional regulator HTH-type, ArsR family | 141 | 36 | ||||||
CA_P0104 | arsb Heavy metal resistance membrane protein | 141 | 44 | ||||||
CA_P0105 | arsc Arsenate reductase, arsC, protein-tyrosine-phosphatase family enzyme | 141 | 54 | ||||||
CA_P0106 | dxs 1-deoxyxylulose-5-phosphate synthase, dehydrogenase | 18.5 | 28 | ||||||
CA_P0107 | HTH transcriptional regulator MerR family | 51.5 | 38 | ||||||
CA_P0108 | Predicted HTH containing transcriptional regulator | 114.5 | 76 | ||||||
CA_P0110 | NH2-acetyltransferase | 56 | 42 | ||||||
CA_P0112 | hypothetical protein | 4686.5 | 784.5 | ||||||
CA_P0113 | Solo B3/4 domain (OB-fold DNA/RNA-binding) of Phe-aaRS-beta | 658 | 591.5 | ||||||
CA_P0114 | Possible beta-xylosidase, family 43 of glycosyl hydrolases | 19 | 16 | ||||||
CA_P0115 | xynD Endo-1,4-beta-xylanase XynD B.subtilis ortholog (family 43 glycosyl hydrolase and cellulose-binding domain) | 9 | 4 | ||||||
CA_P0116 | Xylanase, glycosyl hydrolase family 10 | 224.5 | 53 | ||||||
CA_P0117 | Possible beta-xylosidase diverged, family 5/39 of glycosyl hydrolases and alpha-amylase C (Greek key) C-terminal domain | 339.5 | 45 | ||||||
CA_P0118 | Possible xylan degradation enzyme (glycosyl hydrolase family 30-like domain and Ricin B-like domain) | 262.5 | 27.5 | ||||||
CA_P0119 | Possible xylan degradation enzyme (glycosyl hydrolase family 30-like domain and Ricin B-like domain) | 224 | 17 | ||||||
CA_P0120 | Possible xylan degradation enzyme (glycosyl hydrolase family 43-like domain, cellulose-binding domain and Ricin B-like domain) | 199.5 | 15 | ||||||
CA_P0123 | hypothetical protein | 102 | 79.5 | ||||||
CA_P0124 | Permease, MDR related, probably tetracycline resistance protein | 1062.5 | 421 |