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Transcriptome_data
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1. Array
2. Array
3. Array
4. Array
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Description: | This data-sheet reflects the transcriptome of C. acetobutylicum concerning the comparison of acidogenesis to solventogenesis. Genes with average fold regulation > 1.0 (significant > 3.0) showed elevated transcript level in the acidogenesis (pH 5.7) or repressed transcript level in the solventogenesis (pH 4.5), respectively. Genes were figured out as significant induced, if the average fold regulation was > 3.0 and at least three out of four micro arrays were > 2.0.Furthermore, genes with fold regulation < 1.0 (significant < 0.33) showed elevated transcript level in the solventogenesis (pH 4.5) or repressed transcript level in the acidogenesis (pH 5.7), respectively. Genes were figured out as significant induced, if the average fold regulation was < 0.33 and at least three out of four micro arrays were < 0.5. | ||||||||
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CAC2440 | Predicted membrane protein | 0.9105 | 1.1031439602868174 | 0.6234999999999999 | 0.7312614259597806 | 0.8421013465616495 | 0.21047063032661004 | ||
CAC2441 | Ferrichrome-binding periplasmic protein | 0.793 | 0.7977662544874351 | 0.812 | 0.5561735261401557 | 0.7397349451568977 | 0.1226401669287994 | ||
CAC2442 | Hemin permease | 0.872 | 0.9680542110358181 | 0.918 | 0.5611672278338945 | 0.8298053597174282 | 0.1833374602891953 | ||
CAC2443 | Iron (III) ABC transporter, ATPase component | 0.8534999999999999 | 0.8305647840531561 | 1.029 | 0.8257638315441783 | 0.8847071538993335 | 0.09695363729321249 | ||
CAC2444 | Predicted metal-binding protein | 0.9219999999999999 | 0.9372071227741331 | 0.9255 | 0.9306654257794322 | 0.9288431371383914 | 0.006615186654637553 | ||
CAC2445 | 5-aminoimidazole-4-carboxamide ribonucleotide transformylase | 1.013 | 0.9411764705882353 | 1.3195000000000001 | 0.8250825082508251 | 1.024689744709765 | 0.2112401891662248 | ||
CAC2446 | hypothetical protein | 0.875 | 0.9629272989889264 | 2.2415000000000003 | 0.978952520802741 | 1.264594954947917 | 0.6528712662297355 | ||
CAC2448 | NAD(FAD)-dependent dehydrogenase, NirB-family (N-terminal domain) | 0.361 | 0.331619963521804 | 1.2325 | 0.4672897196261682 | 0.598102420786993 | 0.4269280615706664 | ||
CAC2449 | Predicted flavoprotein | 0.34850000000000003 | 0.3141690229343387 | 0.9325 | 0.37030179596371043 | 0.4913677047245123 | 0.2949944689201955 | ||
CAC2450 | Desulfoferrodoxin | 0.27549999999999997 | 0.34958923265163433 | 0.271 | 0.2127885945313331 | 0.27721945679574184 | 0.05606650409431606 | ||
CAC2451 | SoxR family transcriptional regulator fused to SAM-dependent methyltransferase | 1.107 | 0.851063829787234 | 0.804 | 0.9206879432624113 | 0.16305792799770066 | |||
CAC2452 | flavodoxin | 0.6134999999999999 | 0.7042253521126761 | 1.3475 | 0.9385265133740027 | 0.9009379663716698 | 0.3276924299118025 | ||
CAC2458 | ferrodoxin oxidoreductase beta subunit | 0.46799999999999997 | 0.4702562896778744 | 4.942 | 1.203369434416366 | 1.77090643102356 | 2.142209811067904 | ||
CAC2459 | 2-oxoacid ferredoxin oxidoreductase, alpha subunit | 0.521 | 0.42562247286656735 | 4.439500000000001 | 0.929368029739777 | 1.5788726256515861 | 1.9195594635214024 | ||
CAC2467 | hypothetical protein | 0.479 | 0.665335994677312 | 0.618 | 0.6428801028608165 | 0.6013040243845321 | 0.08379676505976894 | ||
CAC2468 | Predicted acetyltransferase | 0.7084999999999999 | 0.4870920603994155 | 1.0505 | 0.6745362563237775 | 0.7301570791807982 | 0.23470754517633713 | ||
CAC2469 | Lactoylglutathione lyase (fragment) | 0.909 | 0.987166831194472 | 0.866 | 1.017293997965412 | 0.944865207289971 | 0.0696213356151396 | ||
CAC2470 | Uncharacterized Zn-finger protein | 1.2285 | 1.0565240359218173 | 1.6555 | 1.389854065323141 | 1.3325945253112397 | 0.2546875116803824 | ||
CAC2472 | Alpha/beta superfamily hydrolase | 0.758 | 0.7993605115907275 | 0.7625 | 0.5673758865248226 | 0.7218090995288875 | 0.10460938366068352 | ||
CAC2473 | Predicted transcriptional regulator | 1.014 | 0.8340283569641367 | 2.0365 | 1.0672358591248665 | 1.2379410540222509 | 0.5416430916779686 | ||
CAC2474 | def N-formylmethionyl-tRNA deformylase | 1.452 | 1.1806375442739079 | 1.064 | 0.8605851979345955 | 1.1393056855521257 | 0.24687521363883003 | ||
CAC2475 | Possible 5-Nitroimidazole antibiotics resistance protein, NimA-family | 0.8525 | 0.7993605115907275 | 1.8559999999999999 | 1.397624039133473 | 1.2263711376810502 | 0.49929208649376744 | ||
CAC2477 | hypothetical protein | 0.775 | 0.5717552887364208 | 1.0394999999999999 | 0.44140366365040834 | 0.7069147380967072 | 0.26077625577540986 | ||
CAC2479 | hypothetical protein | 0.7090000000000001 | 0.8163265306122448 | 0.749 | 0.4586104104563173 | 0.6832342352671406 | 0.1561606354538373 | ||
CAC2480 | Predicted acetyltransferase | 0.696 | 0.7352941176470588 | 0.69 | 0.62266500622665 | 0.6859897809684271 | 0.046751937760762134 | ||
CAC2481 | topology modulation protein | 0.756 | 0.6199628022318661 | 0.7065 | 0.6146281499692686 | 0.6742727380502838 | 0.06885973127677035 | ||
CAC2482 | Carbonic anhydrase | 0.731 | 0.6047777441790142 | 0.7115 | 0.5142710208279763 | 0.6403871912517476 | 0.10073237453850437 | ||
CAC2484 | Predicted membrane, YQJA B,subtilis ortholog | 0.7284999999999999 | 0.6293266205160478 | 0.8135 | 0.5889281507656066 | 0.6900636928204136 | 0.10104662530825723 | ||
CAC2487 | Predicted acetyltransferase | 0.896 | 0.9775171065493645 | 0.3410059676044331 | 0.7381743580512659 | 0.3463644142267519 | |||
CAC2488 | Uncharacterized conserved protein, YTFE family | 0.918 | 1.016260162601626 | 1.36 | 0.8628127696289905 | 1.0392682330576541 | 0.22304017018975092 | ||
CAC2490 | Xre family DNA-binding domain and TPR repeats containing protein | 0.927 | 0.9601536245799327 | 1.6235 | 1.4749262536873158 | 1.2463949695668122 | 0.35514410500727916 | ||
CAC2494 | Predicted membrane protein | 1.0985 | 0.9925558312655086 | 0.9835 | 1.0248519437551697 | 0.06394160743567757 | |||
CAC2495 | Predicted transcriptional regulator | 0.853 | 0.8609556607834696 | 0.8634999999999999 | 0.9140767824497257 | 0.8728831108082987 | 0.027824231113979286 | ||
CAC2496 | Predicted phosphatase of HAD hydrolase superfamily | 1.15 | 1.0764262648008611 | 1.046 | 1.1299435028248588 | 1.1005924419064301 | 0.047843252408287566 | ||
CAC2497 | Hypothetical secreted protein | 0.166 | 0.27925160569673274 | 0.1865 | 0.21593608291945582 | 0.21192192215404715 | 0.04934401967458508 | ||
CAC2500 | hypothetical protein | 0.759 | 0.6508298080052065 | 0.382 | 0.5563282336578581 | 0.5870395104157662 | 0.1598165567103282 | ||
CAC2501 | Membrane protein, predicted transporter of cations and cationic drugs | 0.805 | 0.8210180623973727 | 0.4515 | 0.47326076668244205 | 0.6376947072699538 | 0.20273587360828288 | ||
CAC2505 | Uncharacterized membrane protein, YXJN B,subtilis homolog | 0.9825 | 0.9186954524575103 | 1.0590000000000002 | 0.6150061500615006 | 0.8938004006297527 | 0.19451180282607763 | ||
CAC2507 | Predicted membrane protein | 0.974 | 0.899685110211426 | 0.7715000000000001 | 0.572737686139748 | 0.8044806990877935 | 0.1756826910860581 | ||
CAC2508 | Nitroreductase family protein | 0.857 | 0.7309941520467836 | 1.0055 | 0.5903187721369539 | 0.7959532310459344 | 0.17714567358911812 | ||
CAC2509 | Predicted acetyltransferase | 1.3705 | 1.0422094841063054 | 2.44 | 1.0995052226498077 | 1.4880536766890284 | 0.6505811798088414 | ||
CAC2513 | Predicted membrane protein | 0.867 | 1.2292562999385372 | 0.3665 | 0.3888780867198133 | 0.7129085966645876 | 0.41446905733977235 | ||
CAC2514 | Beta galactosidase | 1.8279999999999998 | 1.7006802721088436 | 3.0769230769230775 | 2.2018677830106403 | 0.7604892529357037 | |||
CAC2515 | hypothetical protein | 0.901 | 0.7779074290159472 | 0.873 | 0.6337135614702155 | 0.7964052476215406 | 0.12057856685297971 | ||
CAC2517 | nrpE Extracellular neutral metalloprotease, NPRE | 0.0575 | 0.055736699830003074 | 0.056499999999999995 | 0.03982873643333665 | 0.052391359065834926 | 0.008406147249782682 | ||
CAC2518 | Extracellular neutral metalloprotease, NPRE (fragment or C-term, domain) | 0.6365000000000001 | 0.5468963631391851 | 0.631 | 0.35211267605633806 | 0.5416272597988808 | 0.13283054922901577 | ||
CAC2520 | Multimeric flavodoxin (WrbA) domain containing protein | 1.04 | 0.9178522257916474 | 1.611 | 0.9306654257794322 | 1.12487941289277 | 0.32868275937544117 | ||
CAC2528 | Multimeric flavodoxin WrbA fused to cytochrome c-like domain | 0.679 | 0.8680555555555556 | 1.0885 | 0.9960159362549801 | 0.9078928729526339 | 0.17735422913104268 | ||
CAC2529 | Predicted acetyltransferase | 0.909 | 0.7251631617113851 | 0.8230452674897119 | 0.8190694764003656 | 0.09198288408219339 | |||
CAC2530 | Predicted N-acetyltransferase | 0.967 | 0.7404664938911514 | 2.0125 | 0.7840062720501764 | 1.1259931914853318 | 0.5990990580597327 | ||
CAC2531 | S-adenosylmethionine-dependent methyltransferase | 0.9844999999999999 | 0.7797270955165693 | 1.8555000000000001 | 0.7852375343541422 | 1.101241157467678 | 0.5117826626079585 | ||
CAC2535 | Predicted protein of beta-propeller fold | 0.29800000000000004 | 3.1545741324921135 | 0.303 | 1.251858044164038 | 1.6478023651478564 | |||
CAC2536 | Glycosyltransferase | 0.915 | 1.3003901170351104 | 0.7645 | 0.9041591320072332 | 0.9710123122605859 | 0.230031737106037 | ||
CAC2539 | Predicted acetyltransferase | 1.2035 | 0.9578544061302682 | 0.9910000000000001 | 0.8956560680698613 | 1.0120026185500324 | 0.1336424406205399 | ||
CAC2541 | Reductase/isomerase/elongation factor common domain | 0.35 | 0.36489691662105456 | 0.47 | 0.9165902841429882 | 0.5253718001910107 | 0.2662238375259332 | ||
CAC2542 | FAD/FMN-containing dehydrogenase | 0.331 | 0.28153153153153154 | 0.7945 | 0.5186721991701245 | 0.481425932675414 | 0.23237067286908494 | ||
CAC2543 | etfA Electron-transferring flavoprotein large subunit | 0.321 | 0.2721829069134458 | 0.7755000000000001 | 0.49603174603174605 | 0.466178663236298 | 0.227509775365096 | ||
CAC2544 | etfB Electron-transferring flavoprotein small subunit | 0.318 | 0.3068896731624981 | 0.78 | 0.5121638924455826 | 0.4792633914020201 | 0.22154272038452802 | ||
CAC2545 | hypothetical protein | 0.3155 | 0.3286230693394676 | 0.8625 | 0.5307855626326964 | 0.509352157993041 | 0.25522176748384234 | ||
CAC2546 | Transcriptional regulator, FadR family | 0.833 | 1.1299435028248588 | 1.988 | 1.3169811676082863 | 0.5997862669615973 | |||
CAC2550 | hypothetical protein | 1.645 | 1.160092807424594 | 1.0745 | 1.937984496124031 | 1.4543943258871561 | 0.4087065199562996 | ||
CAC2551 | RNAse H family protein | 1.155 | 1.1402508551881414 | 2.523 | 1.5313935681470137 | 1.5874111058337887 | 0.649460339466936 | ||
CAC2552 | Predicted transcriptional regulator CRO family | 0.897 | 0.9099181073703367 | 1.145 | 1.0325245224574084 | 0.9961106574569363 | 0.11654195810830825 | ||
CAC2553 | Uncharacterized mebrane protein, YOAS B,subtilis ortholog | 0.8554999999999999 | 0.9737098344693282 | 1.038 | 1.0090817356205852 | 0.9690728925224783 | 0.08014976984331253 | ||
CAC2556 | Endoglucanase, family 26, S-layer homology domain | 1.051 | 1.2338062924120914 | 1.3679999999999999 | 0.9799118079372857 | 1.1581795250873443 | 0.17607845713810358 | ||
CAC2557 | hypothetical protein | 0.82 | 0.7032348804500703 | 0.572 | 0.8795074758135444 | 0.7436855890659037 | 0.13587209126765287 | ||
CAC2558 | hypothetical protein | 0.578 | 0.6954102920723227 | 0.766 | 0.8071025020177562 | 0.7116281985225198 | 0.10031807971615163 | ||
CAC2560 | Predicted acetyltransferase | 0.863 | 0.7024938531787847 | 1.037 | 1.4749262536873156 | 1.019355026716525 | 0.33301871098637775 | ||
CAC2564 | hypothetical protein | 0.9215 | 1 | 2.0140000000000002 | 1.885014137606032 | 1.4551285344015081 | 0.5741777722554487 | ||
CAC2565 | NifU-related domain containing protein | 1.7325 | 1.224739742804654 | 3.4215 | 1.5810276679841895 | 1.9899418526972108 | 0.9778173169654784 | ||
CAC2566 | Possible rRNA methylase (SAM-dependent methyltransferase superfamily), YTQB B,subtilis | 1.2565 | 1.1743981209630066 | 3.24 | 1.6246953696181967 | 1.8238983726453009 | 0.9641606272863361 | ||
CAC2569 | NimC/NimA family protein | 1.8345 | 1.953125 | 2.391 | 2.6490066225165565 | 2.206907905629139 | 0.37966414370598817 | ||
CAC2571 | Predicted acetyltransferase | 1.173 | 0.9132420091324202 | 1.7115 | 0.9259259259259258 | 1.1809169837645865 | 0.37338601445483904 | ||
CAC2572 | Possible aminoglycoside phosphotransferase (protein kinase related), diverged | 1.101 | 1.1494252873563218 | 1.8845 | 1.1389521640091116 | 1.3184693628413584 | 0.37792676985099083 | ||
CAC2573 | Predicted S-adenosylmethionine-dependent methyltransferase | 1.27 | 0.9861932938856016 | 2.2984999999999998 | 1.07469102632993 | 1.4073460800538828 | 0.6058185396103606 | ||
CAC2574 | Predicted S-adenosylmethionine-dependent methyltransferase | 1.715 | 1.1614401858304297 | 1.2406947890818858 | 1.3723783249707717 | 0.299353523754127 | |||
CAC2575 | rubY Rubrerythrin | 1.5635 | 1.314060446780552 | 2.4065000000000003 | 1.1983223487118035 | 1.620595698873089 | 0.5456446133982129 | ||
CAC2576 | 6-pyruvoyl-tetrahydropterin synthase related protein | 1.4155 | 1.016260162601626 | 1.708 | 0.684931506849315 | 1.2061729173627354 | 0.44848177623645963 | ||
CAC2577 | GGDEF domain containing protein, (inactivated) | 1.0775 | 1.0319917440660475 | 1.655 | 0.6561679790026247 | 1.105164930767168 | 0.41232532855278 | ||
CAC2578 | Glycosyltransferase | 1.2415 | 1.168907071887785 | 0.8714999999999999 | 0.5614823133071308 | 0.9608473462987289 | 0.31066066123063396 | ||
CAC2579 | hypothetical protein | 1.1855 | 1.1235955056179776 | 0.9615 | 0.5656108597285068 | 0.9590515913366211 | 0.27878019149293837 | ||
CAC2580 | Hypothetical protein, CF-41 family | 1.147 | 1.243781094527363 | 0.737 | 0.6138735420503376 | 0.9354136591444253 | 0.3069284834600513 | ||
CAC2581 | 6-pyruvoyl-tetrahydropterin synthase related domain, conserved membrane protein | 1.027 | 1.06439595529537 | 0.9975 | 0.5768676088837612 | 0.9164408910447828 | 0.22803114605435668 | ||
CAC2584 | Protein containing ChW-repeats | 0.972 | 0.7501875468867216 | 2.4225 | 0.9319664492078286 | 1.2691634990236376 | 0.7749256134058444 | ||
CAC2592 | 6-pyruvoyl-tetrahydropterin synthase related domain, conserved membrane protein | 1.087 | 1.1217049915872126 | 1.1865 | 0.8768084173608066 | 1.0680033522370047 | 0.13396728126488264 | ||
CAC2597 | hypothetical protein | 0.8835 | 0.7920792079207921 | 0.737 | 0.832639467110741 | 0.8113046687578833 | 0.06207023338534399 | ||
CAC2601 | S-adenosylmethionine decarboxylase proenzyme | 1.933 | 2.1321961620469083 | 5.214 | 3.2102728731942216 | 3.122367258810282 | 1.503073318044567 | ||
CAC2603 | Predicted membrane protein | 1.4815 | 1.5209125475285172 | 0.79 | 0.60790273556231 | 1.1000788207727068 | 0.46938588087100497 | ||
CAC2606 | hypothetical protein | 0.1825 | 0.19105846388995032 | 0.369 | 0.36456434560699963 | 0.27678070237423746 | 0.10399923058167704 | ||
CAC2607 | gluconate 5-dehydrogenase | 0.2005 | 0.19164430816404754 | 0.5175 | 0.28340654669122856 | 0.298262713713819 | 0.15188891334502508 | ||
CAC2608 | Trancriptional regulator of AraC family | 0.538 | 0.591715976331361 | 0.9425 | 0.8869179600886918 | 0.7397834841050133 | 0.20443670671339229 | ||
CAC2609 | cytidine deaminase | 0.8460000000000001 | 0.8223684210526314 | 1.1255000000000002 | 1.3262599469496021 | 1.0300320920005586 | 0.24073296036837966 | ||
CAC2612 | xylB Xylulose kinase | 1.419 | 1.2507817385866165 | 3.1275 | 1.9324272461955385 | 1.038375419119969 | |||
CAC2613 | glcK Transcriptional regulators of NagC/XylR family | 1.929 | 1.6764459346186085 | 6.39 | 2.911208151382824 | 3.226663521500358 | 2.1751103380788677 | ||
CAC2619 | Acyl-CoA thioesterase family protein | 0.9435 | 1.0723860589812333 | 2.2729999999999997 | 1.4545454545454546 | 1.4358578783816718 | 0.5987999669319963 | ||
CAC2622 | comE ComE-like protein, Metallo beta-lactamase superfamily hydrolase | 0.891 | 0.9285051067780873 | 0.92 | 1.1435105774728416 | 0.9707539210627322 | 0.11628481280973012 | ||
CAC2623 | Possible sensorory transduction protein, containing AAA ATPase domain, TPR repeats domain, GGDEF domain and GAF domain | 1.1335000000000002 | 0.9633911368015416 | 2.1615 | 1.0157440325038092 | 1.3185337923263378 | 0.5664619657749818 | ||
CAC2624 | dapF diaminopimelate epimerase | 1.3969999999999998 | 1.2919896640826873 | 2.343 | 1.6835016835016836 | 1.6788728368960926 | 0.47265815715636816 | ||
CAC2626 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase | 0.7495 | 0.7344840249724569 | 1.0425 | 1.129305477131564 | 0.9139473755260052 | 0.20178777853279312 | ||
CAC2627 | trmB tRNA (guanine-N(7)-)-methyltransferase | 1.4020000000000001 | 1.0460251046025104 | 1.4064999999999999 | 0.8061265618702137 | 1.165162916618181 | 0.29293703200667554 |
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Description: | The single sheets contain the transcript amount of the genes for all four microarrays (sheet 1 to 4). The first biological experiment will be represented by the 1. and 2. array. The 3. and 4. array showed the transcript level of the second biological experiment. The 1. and 3. array the cDNA of pH 4.5 was labeled by Cy3 and pH 5.7 by Cy5, respectively. The 2. and 4. array contained the transcript level of the dyeflip (pH 4.5 Cy5 / pH 5.7 Cy3). Furthermore, the 1. and 2. array were evaluated under high scanning conditions and the 3. and 4. array under low scanning conditions. | ||||||||
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1. Array (high Scan) | pH 4.5 / Cy3 | ||||||||
ORF | Name | (F 635 median - B635) - B635 SD | (F 532 median - B532) - B532 SD | pH 5.7 / Cy5 | |||||
CA_P0002 | Transglutaminase-like predicted protease domain fused ChW-repeats and cell-adhesion domain | 373.5 | 279 | ||||||
CA_P0003 | Transglutaminase-like predicted protease domain fused to ChW-repeats and cell-adhesion domain | 266 | 109 | ||||||
CA_P0004 | Cysteine protease | 415.5 | 20426.5 | ||||||
CA_P0005 | Uncharacterized protein similar to Bacteriocin immunity protein of mesC/lccI/entI family | 340.5 | 101.5 | ||||||
CA_P0006 | GntR family HTH transcriptional regulator | 1748.5 | 1721 | ||||||
CA_P0007 | hypothetical protein | 1246 | 1028 | ||||||
CA_P0009 | Response regulator (CheY + HTH domains) | 445 | 1880 | ||||||
CA_P0010 | bgla Beta_glucosidase | 660 | 2242.5 | ||||||
CA_P0012 | pedb Pediocin immunity protein, PedB | 3038 | 3942 | ||||||
CA_P0013 | FAD dependent dehydrogenase | 1007.5 | 603 | ||||||
CA_P0014 | Protein tyrosine phosphatase II superfamily protein | 1855 | 1464.5 | ||||||
CA_P0015 | GLPQ related phosphodiesterase | 3905.5 | 3969 | ||||||
CA_P0018 | hypothetical protein | 63 | 32 | ||||||
CA_P0019 | grkc Spore germination protein, GRKC | 129 | 127.5 | ||||||
CA_P0020 | grka Spore germination protein, GRKA | 168 | 213.5 | ||||||
CA_P0024 | MarR family HTH transcriptional regulator | 95 | 81 | ||||||
CA_P0025 | pdc Pyruvate decarboxylase | 5988 | 5220.5 | ||||||
CA_P0026 | hypothetical protein | 5853.5 | 5351 | ||||||
CA_P0027 | Predicted amino acid permeases | 235.5 | 219.5 | ||||||
CA_P0028 | HTH transcriptional regulator TetR family | 657 | 496 | ||||||
CA_P0031 | hlyU Transcriptional activator HLYU, HTH of ArsR family | 458.5 | 346 | ||||||
CA_P0032 | Rhodanese-like domain | 257.5 | 247 | ||||||
CA_P0033 | hypothetical protein | 411.5 | 417.5 | ||||||
CA_P0034 | Rhodanese-like domain | 2115 | 2481 | ||||||
CA_P0035 | adhe Aldehyde-alcohol dehydrogenase, ADHE1 | 2648.5 | 850.5 | ||||||
CA_P0036 | Uncharacterized, ortholog of YgaT gene of B,subtillis | 46107.5 | 445 | ||||||
CA_P0037 | Uncharacterized, ortholog of YgaS gene of B,subtillis | 46444.5 | 354.5 | ||||||
CA_P0038 | Uncharacterized conserved protein, YCII family | 988.5 | 178.5 | ||||||
CA_P0040 | Xre family DNA-binding domain and TPR repeats containing protein | 403 | 1927.5 | ||||||
CA_P0044 | hypothetical protein | 208 | 1194.5 | ||||||
CA_P0045 | Glycosyl transferase | 356.5 | 1915 | ||||||
CA_P0046 | TetR family HTH transcriptional regulator | 78 | 135 | ||||||
CA_P0047 | Sulphohydrolase/Glycosulfatase, Zn-dependent hydrolase | 107 | 70 | ||||||
CA_P0048 | Related to methyl-accepting chemotaxis protein | 1133.5 | 688.5 | ||||||
CA_P0049 | Permease, MDR related | 166 | 147 | ||||||
CA_P0050 | pnba Para-nitrobenzyl esterase, a/b hydrolase | 1928.5 | 1907 | ||||||
CA_P0052 | MarR family HTH transcriptional regulator | 473.5 | 317 | ||||||
CA_P0053 | xynb Xylanase, glycosyl hydrolase family 10 | 311.5 | 5611 | ||||||
CA_P0054 | Xylanase/chitin deacetylase family enzyme | 439 | 7819.5 | ||||||
CA_P0055 | hypothetical protein | 294.5 | 241 | ||||||
CA_P0056 | pell Pectate lyase, secreted, polysaccharide lyase family | 434 | 4597 | ||||||
CA_P0057 | Putative glycoportein or S-layer protein | 684.5 | 1091.5 | ||||||
CA_P0058 | Rare lipoprotein A RLPA releated protein | 11422 | 9077.5 | ||||||
CA_P0059 | Alcohol dehydrogenase | 1053 | 982 | ||||||
CA_P0062 | Hypothetical protein, CF-18 family | 138.5 | 69 | ||||||
CA_P0064 | alf Fructose-bisphosphate aldolase class I | 85.5 | 76 | ||||||
CA_P0065 | Predicted secreted metalloprotease | 310 | 4875 | ||||||
CA_P0066 | ptna Mannose-specific phosphotransferase system component IIAB | 104.5 | 15 | ||||||
CA_P0067 | manY/levF Mannose/fructose-specific phosphotransferase system component IIC | 204 | 52 | ||||||
CA_P0072 | hypothetical protein | 5976.5 | 2992.5 | ||||||
CA_P0073 | ABC ATPase containing transporter | 2071.5 | 725 | ||||||
CA_P0074 | hypothetical protein | 1774 | 546 | ||||||
CA_P0076 | penicillin binding protein 1A | 928 | 564.5 | ||||||
CA_P0077 | Uncharacterized Fe-S protein | 142.5 | 71.5 | ||||||
CA_P0079 | thlr ThlR, HTH transcriptional regulator TetR/AcrR family | 2049.5 | 1822.5 | ||||||
CA_P0080 | Site-Specific Recombinase, Xerd | 292.5 | 297.5 | ||||||
CA_P0081 | TnpR resolvase C-terminal fragment | 224 | 161.5 | ||||||
CA_P0082 | crp CRP (cyclic AMP receptor protein) regulatory protein | 722.5 | 711.5 | ||||||
CA_P0083 | SAM-dependent methyltransferase | 1307.5 | 605 | ||||||
CA_P0084 | hypothetical protein | 1124 | 831 | ||||||
CA_P0085 | Hypothetical secreted protein (fragment) | 631.5 | 489 | ||||||
CA_P0086 | Permease, MDR related, probably tetracycline resistance protein | 635.5 | 606.5 | ||||||
CA_P0087 | HTH transcriptional regulator TetR/AcrR family | 3898.5 | 2437.5 | ||||||
CA_P0088 | abf 3-oxoacyl-acyl-carrier protein synthase | 1694 | 1179.5 | ||||||
CA_P0089 | Predicted membrane protein | 158 | 86 | ||||||
CA_P0090 | ABC-type transporter, ATPase component | 330 | 239 | ||||||
CA_P0091 | Predicted regulator of stationary/sporulation gene expression | 1641.5 | 1946 | ||||||
CA_P0093 | tnpa TnpA, transposase (3' segment) | 427.5 | 420.5 | ||||||
CA_P0094 | TnpA, transposase (5' segment) | 589.5 | 522.5 | ||||||
CA_P0096 | ipyr Inorganic pyrophosphatase | 820.5 | 1010.5 | ||||||
CA_P0097 | lipg Carboxyl esterase, a/b hydrolase | 2128 | 2506 | ||||||
CA_P0098 | amyA alpha-amylase | 295.5 | 261.5 | ||||||
CA_P0099 | muts DNA mismatch repair protein, MUTS fragment | 234 | 182.5 | ||||||
CA_P0100 | HTH transcriptional regulator TetR/AcrR family | 638 | 838 | ||||||
CA_P0101 | hypothetical protein | 742 | 1077.5 | ||||||
CA_P0102 | Membrane protein | 891.5 | 8260.5 | ||||||
CA_P0103 | arsr Transcriptional regulator HTH-type, ArsR family | 426 | 516 | ||||||
CA_P0104 | arsb Heavy metal resistance membrane protein | 212 | 334 | ||||||
CA_P0105 | arsc Arsenate reductase, arsC, protein-tyrosine-phosphatase family enzyme | 259 | 556 | ||||||
CA_P0107 | HTH transcriptional regulator MerR family | 301.5 | 233.5 | ||||||
CA_P0108 | Predicted HTH containing transcriptional regulator | 861 | 780 | ||||||
CA_P0110 | NH2-acetyltransferase | 372.5 | 235 | ||||||
CA_P0111 | NH2-acetyltransferase | 167 | 37 | ||||||
CA_P0112 | hypothetical protein | 3320.5 | 12481.5 | ||||||
CA_P0113 | Solo B3/4 domain (OB-fold DNA/RNA-binding) of Phe-aaRS-beta | 3682 | 3518.5 | ||||||
CA_P0114 | Possible beta-xylosidase, family 43 of glycosyl hydrolases | 97 | 252.5 | ||||||
CA_P0115 | xynD Endo-1,4-beta-xylanase XynD B,subtilis ortholog (family 43 glycosyl hydrolase and cellulose-binding domain) | 3 | 99 | ||||||
CA_P0116 | Xylanase, glycosyl hydrolase family 10 | 253.5 | 1616 | ||||||
CA_P0117 | Possible beta-xylosidase diverged, family 5/39 of glycosyl hydrolases and alpha-amylase C (Greek key) C-terminal domain | 181.5 | 1570.5 | ||||||
CA_P0118 | Possible xylan degradation enzyme (glycosyl hydrolase family 30-like domain and Ricin B-like domain) | 194 | 1459 | ||||||
CA_P0119 | Possible xylan degradation enzyme (glycosyl hydrolase family 30-like domain and Ricin B-like domain) | 78 | 1033.5 | ||||||
CA_P0120 | Possible xylan degradation enzyme (glycosyl hydrolase family 43-like domain, cellulose-binding domain and Ricin B-like domain) | 96 | 1150.5 | ||||||
CA_P0121 | Leu-rich protein family protein, YaeG (E,coli) homolog | 23 | 67 | ||||||
CA_P0123 | hypothetical protein | 597.5 | 758.5 | ||||||
CA_P0124 | Permease, MDR related, probably tetracycline resistance protein | 1910 | 2061.5 | ||||||
CA_P0125 | hypothetical protein | 1040 | 703.5 | ||||||
CA_P0126 | Uncharacterized protein (NN,term domain homologous to B,subtilis (gi|833839) | 2070 | 1554 | ||||||
CA_P0127 | HTH transcriptional regulator TetR family | 393 | 205 |
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2. array (high scan) | pH 4.5 / Cy5 | ||||||||||
ORF | Name | (F 635 median - B635) - B635 SD | (F 532 median - B532) - B532 SD | pH 5.7 / Cy3 | |||||||
CA_P0001 | Oxidoreductase | 89 | 117 | ||||||||
CA_P0002 | Transglutaminase-like predicted protease domain fused ChW-repeats and cell-adhesion domain | 279 | 286 | ||||||||
CA_P0003 | Transglutaminase-like predicted protease domain fused to ChW-repeats and cell-adhesion domain | 155.5 | 237.5 | ||||||||
CA_P0004 | Cysteine protease | 16476 | 271 | ||||||||
CA_P0005 | Uncharacterized protein similar to Bacteriocin immunity protein of mesC/lccI/entI family | 162.5 | 229.5 | ||||||||
CA_P0006 | GntR family HTH transcriptional regulator | 1599 | 1544 | ||||||||
CA_P0007 | hypothetical protein | 957.5 | 1054 | ||||||||
CA_P0009 | Response regulator (CheY + HTH domains) | 3064 | 814.5 | ||||||||
CA_P0010 | bgla Beta_glucosidase | 2148.5 | 642.5 | ||||||||
CA_P0012 | pedb Pediocin immunity protein, PedB | 3817.5 | 2461.5 | ||||||||
CA_P0013 | FAD dependent dehydrogenase | 664 | 744.5 | ||||||||
CA_P0014 | Protein tyrosine phosphatase II superfamily protein | 1588 | 1583.5 | ||||||||
CA_P0015 | GLPQ related phosphodiesterase | 3664 | 3275 | ||||||||
CA_P0019 | grkc Spore germination protein, GRKC | 116 | 94 | ||||||||
CA_P0020 | grka Spore germination protein, GRKA | 201 | 85 | ||||||||
CA_P0021 | hypothetical protein | 19 | 32 | ||||||||
CA_P0023 | hypothetical protein | 44 | 49 | ||||||||
CA_P0024 | MarR family HTH transcriptional regulator | 106.5 | 118 | ||||||||
CA_P0025 | pdc Pyruvate decarboxylase | 5205.5 | 5797 | ||||||||
CA_P0026 | hypothetical protein | 5122 | 5912 | ||||||||
CA_P0027 | Predicted amino acid permeases | 206.5 | 114.5 | ||||||||
CA_P0028 | HTH transcriptional regulator TetR family | 468 | 431.5 | ||||||||
CA_P0031 | hlyU Transcriptional activator HLYU, HTH of ArsR family | 406.5 | 375 | ||||||||
CA_P0032 | Rhodanese-like domain | 228.5 | 167.5 | ||||||||
CA_P0033 | hypothetical protein | 399.5 | 297 | ||||||||
CA_P0034 | Rhodanese-like domain | 2499 | 1767.5 | ||||||||
CA_P0035 | adhe Aldehyde-alcohol dehydrogenase, ADHE1 | 814.5 | 2786.5 | ||||||||
CA_P0036 | Uncharacterized, ortholog of YgaT gene of B,subtillis | 3232.5 | 60284.5 | ||||||||
CA_P0037 | Uncharacterized, ortholog of YgaS gene of B,subtillis | 1103.5 | 61929.5 | ||||||||
CA_P0038 | Uncharacterized conserved protein, YCII family | 171.5 | 622 | ||||||||
CA_P0040 | Xre family DNA-binding domain and TPR repeats containing protein | 1605.5 | 255 | ||||||||
CA_P0044 | hypothetical protein | 1393 | 187 | ||||||||
CA_P0045 | Glycosyl transferase | 1757 | 261.5 | ||||||||
CA_P0046 | TetR family HTH transcriptional regulator | 157 | 7 | ||||||||
CA_P0047 | Sulphohydrolase/Glycosulfatase, Zn-dependent hydrolase | 107 | 76.5 | ||||||||
CA_P0048 | Related to methyl-accepting chemotaxis protein | 601 | 1031.5 | ||||||||
CA_P0049 | Permease, MDR related | 211.5 | 152.5 | ||||||||
CA_P0050 | pnba Para-nitrobenzyl esterase, a/b hydrolase | 2205 | 2468 | ||||||||
CA_P0051 | Oxidoreductase | 98.5 | 62.5 | ||||||||
CA_P0052 | MarR family HTH transcriptional regulator | 259.5 | 354 | ||||||||
CA_P0053 | xynb Xylanase, glycosyl hydrolase family 10 | 4608.5 | 241.5 | ||||||||
CA_P0054 | Xylanase/chitin deacetylase family enzyme | 6967 | 350 | ||||||||
CA_P0055 | hypothetical protein | 249 | 196 | ||||||||
CA_P0056 | pell Pectate lyase, secreted, polysaccharide lyase family | 4865 | 396 | ||||||||
CA_P0057 | Putative glycoportein or S-layer protein | 1320.5 | 688 | ||||||||
CA_P0058 | Rare lipoprotein A RLPA releated protein | 8917 | 10583 | ||||||||
CA_P0059 | Alcohol dehydrogenase | 837 | 775.5 | ||||||||
CA_P0062 | Hypothetical protein, CF-18 family | 151 | 123.5 | ||||||||
CA_P0064 | alf Fructose-bisphosphate aldolase class I | 124 | 32.5 | ||||||||
CA_P0065 | Predicted secreted metalloprotease | 4264.5 | 229.5 | ||||||||
CA_P0066 | ptna Mannose-specific phosphotransferase system component IIAB | 38 | 51 | ||||||||
CA_P0067 | manY/levF Mannose/fructose-specific phosphotransferase system component IIC | 69.5 | 159.5 | ||||||||
CA_P0072 | hypothetical protein | 2581 | 5461.5 | ||||||||
CA_P0073 | ABC ATPase containing transporter | 701 | 1729.5 | ||||||||
CA_P0074 | hypothetical protein | 599.5 | 1349 | ||||||||
CA_P0076 | penicillin binding protein 1A | 530.5 | 935.5 | ||||||||
CA_P0078 | thil Acetyl coenzyme A acetyltransferase (thiolase) | 259.5 | 283.5 | ||||||||
CA_P0079 | thlr ThlR, HTH transcriptional regulator TetR/AcrR family | 1417.5 | 1399.5 | ||||||||
CA_P0080 | Site-Specific Recombinase, Xerd | 300 | 254 | ||||||||
CA_P0081 | TnpR resolvase C-terminal fragment | 136 | 109 | ||||||||
CA_P0082 | crp CRP (cyclic AMP receptor protein) regulatory protein | 740.5 | 617.5 | ||||||||
CA_P0083 | SAM-dependent methyltransferase | 708.5 | 1280.5 | ||||||||
CA_P0084 | hypothetical protein | 887.5 | 1064 | ||||||||
CA_P0085 | Hypothetical secreted protein (fragment) | 474.5 | 507 | ||||||||
CA_P0086 | Permease, MDR related, probably tetracycline resistance protein | 605.5 | 584 | ||||||||
CA_P0087 | HTH transcriptional regulator TetR/AcrR family | 2460 | 3028.5 | ||||||||
CA_P0088 | abf 3-oxoacyl-acyl-carrier protein synthase | 1536.5 | 1659.5 | ||||||||
CA_P0089 | Predicted membrane protein | 134 | 123 | ||||||||
CA_P0090 | ABC-type transporter, ATPase component | 167.5 | 214.5 | ||||||||
CA_P0091 | Predicted regulator of stationary/sporulation gene expression | 2159 | 1306 | ||||||||
CA_P0093 | tnpa TnpA, transposase (3' segment) | 385.5 | 425.5 | ||||||||
CA_P0094 | TnpA, transposase (5' segment) | 464.5 | 407.5 | ||||||||
CA_P0096 | ipyr Inorganic pyrophosphatase | 959 | 746 | ||||||||
CA_P0097 | lipg Carboxyl esterase, a/b hydrolase | 2062.5 | 1594 | ||||||||
CA_P0098 | amyA alpha-amylase | 297 | 309 | ||||||||
CA_P0099 | muts DNA mismatch repair protein, MUTS fragment | 211 | 148 | ||||||||
CA_P0100 | HTH transcriptional regulator TetR/AcrR family | 942 | 583 | ||||||||
CA_P0101 | hypothetical protein | 1041.5 | 599.5 | ||||||||
CA_P0102 | Membrane protein | 8135.5 | 733 | ||||||||
CA_P0103 | arsr Transcriptional regulator HTH-type, ArsR family | 587 | 263.5 | ||||||||
CA_P0104 | arsb Heavy metal resistance membrane protein | 468.5 | 269 | ||||||||
CA_P0105 | arsc Arsenate reductase, arsC, protein-tyrosine-phosphatase family enzyme | 463 | 214 | ||||||||
CA_P0106 | dxs 1-deoxyxylulose-5-phosphate synthase, dehydrogenase | 107 | 109 | ||||||||
CA_P0108 | Predicted HTH containing transcriptional regulator | 782.5 | 600 | ||||||||
CA_P0110 | NH2-acetyltransferase | 226 | 274 | ||||||||
CA_P0111 | NH2-acetyltransferase | 52 | 152 | ||||||||
CA_P0112 | hypothetical protein | 11961.5 | 2907 | ||||||||
CA_P0113 | Solo B3/4 domain (OB-fold DNA/RNA-binding) of Phe-aaRS-beta | 3998.5 | 2880.5 | ||||||||
CA_P0114 | Possible beta-xylosidase, family 43 of glycosyl hydrolases | 293.5 | 65 | ||||||||
CA_P0116 | Xylanase, glycosyl hydrolase family 10 | 2110.5 | 306 | ||||||||
CA_P0117 | Possible beta-xylosidase diverged, family 5/39 of glycosyl hydrolases and alpha-amylase C (Greek key) C-terminal domain | 1687 | 154 | ||||||||
CA_P0118 | Possible xylan degradation enzyme (glycosyl hydrolase family 30-like domain and Ricin B-like domain) | 1520 | 203 | ||||||||
CA_P0119 | Possible xylan degradation enzyme (glycosyl hydrolase family 30-like domain and Ricin B-like domain) | 797.5 | 16 | ||||||||
CA_P0120 | Possible xylan degradation enzyme (glycosyl hydrolase family 43-like domain, cellulose-binding domain and Ricin B-like domain) | 1005 | 35 | ||||||||
CA_P0122 | dTDP-4-keto-L-rhamnose reductase | 11 | 20 | ||||||||
CA_P0123 | hypothetical protein | 833 | 555.5 | ||||||||
CA_P0124 | Permease, MDR related, probably tetracycline resistance protein | 2063.5 | 1624 | ||||||||
CA_P0125 | hypothetical protein | 693.5 | 846.5 |
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3. array (low scan) | pH 4.5 / Cy3 | ||||||||
ORF | Name | (F 635 median - B635) - B635 SD | (F 532 median - B532) - B532 SD | pH 5.7 / Cy5 | |||||
CA_P0002 | Transglutaminase-like predicted protease domain fused ChW-repeats and cell-adhesion domain | 106.5 | 14.5 | ||||||
CA_P0003 | Transglutaminase-like predicted protease domain fused to ChW-repeats and cell-adhesion domain | 64 | 10 | ||||||
CA_P0004 | Cysteine protease | 167.5 | 4352 | ||||||
CA_P0005 | Uncharacterized protein similar to Bacteriocin immunity protein of mesC/lccI/entI family | 50 | 62.5 | ||||||
CA_P0006 | GntR family HTH transcriptional regulator | 326.5 | 314 | ||||||
CA_P0007 | hypothetical protein | 523.5 | 311 | ||||||
CA_P0009 | Response regulator (CheY + HTH domains) | 197 | 376 | ||||||
CA_P0010 | bgla Beta_glucosidase | 181 | 522.5 | ||||||
CA_P0012 | pedb Pediocin immunity protein, PedB | 1352.5 | 1527.5 | ||||||
CA_P0013 | FAD dependent dehydrogenase | 232.5 | 107.5 | ||||||
CA_P0014 | Protein tyrosine phosphatase II superfamily protein | 534 | 238.5 | ||||||
CA_P0015 | GLPQ related phosphodiesterase | 725.5 | 1011.5 | ||||||
CA_P0018 | hypothetical protein | 9 | 7 | ||||||
CA_P0019 | grkc Spore germination protein, GRKC | 22.5 | 27.5 | ||||||
CA_P0020 | grka Spore germination protein, GRKA | 52 | 85.5 | ||||||
CA_P0025 | pdc Pyruvate decarboxylase | 1341 | 601.5 | ||||||
CA_P0026 | hypothetical protein | 1107 | 650 | ||||||
CA_P0027 | Predicted amino acid permeases | 20.5 | 54 | ||||||
CA_P0028 | HTH transcriptional regulator TetR family | 130 | 41 | ||||||
CA_P0031 | hlyU Transcriptional activator HLYU, HTH of ArsR family | 107 | 77.5 | ||||||
CA_P0032 | Rhodanese-like domain | 42.5 | 10.5 | ||||||
CA_P0033 | hypothetical protein | 105 | 71 | ||||||
CA_P0034 | Rhodanese-like domain | 519 | 591 | ||||||
CA_P0035 | adhe Aldehyde-alcohol dehydrogenase, ADHE1 | 324 | 81 | ||||||
CA_P0036 | Uncharacterized, ortholog of YgaT gene of B.subtillis | 36982.5 | 101.5 | ||||||
CA_P0037 | Uncharacterized, ortholog of YgaS gene of B.subtillis | 27184.5 | 32 | ||||||
CA_P0038 | Uncharacterized conserved protein, YCII family | 153.5 | 22 | ||||||
CA_P0044 | hypothetical protein | 76.5 | 268.5 | ||||||
CA_P0045 | Glycosyl transferase | 84 | 377 | ||||||
CA_P0046 | TetR family HTH transcriptional regulator | 10 | 25 | ||||||
CA_P0047 | Sulphohydrolase/Glycosulfatase, Zn-dependent hydrolase | 31 | 19 | ||||||
CA_P0048 | Related to methyl-accepting chemotaxis protein | 248 | 125.5 | ||||||
CA_P0049 | Permease, MDR related | 33.5 | 69.5 | ||||||
CA_P0050 | pnba Para-nitrobenzyl esterase, a/b hydrolase | 471 | 327.5 | ||||||
CA_P0051 | Oxidoreductase | 37 | 32.5 | ||||||
CA_P0052 | MarR family HTH transcriptional regulator | 28 | 42 | ||||||
CA_P0053 | xynb Xylanase, glycosyl hydrolase family 10 | 102.5 | 2182 | ||||||
CA_P0054 | Xylanase/chitin deacetylase family enzyme | 150 | 2618.5 | ||||||
CA_P0055 | hypothetical protein | 102 | 218.5 | ||||||
CA_P0056 | pell Pectate lyase, secreted, polysaccharide lyase family | 140 | 904 | ||||||
CA_P0057 | Putative glycoportein or S-layer protein | 554.5 | 373.5 | ||||||
CA_P0058 | Rare lipoprotein A RLPA releated protein | 2633.5 | 1793.5 | ||||||
CA_P0059 | Alcohol dehydrogenase | 181.5 | 176 | ||||||
CA_P0061 | hypothetical protein | 18 | 11 | ||||||
CA_P0062 | Hypothetical protein, CF-18 family | 42 | 7.5 | ||||||
CA_P0065 | Predicted secreted metalloprotease | 112.5 | 1834.5 | ||||||
CA_P0066 | ptna Mannose-specific phosphotransferase system component IIAB | 46 | 6 | ||||||
CA_P0067 | manY/levF Mannose/fructose-specific phosphotransferase system component IIC | 40.5 | 7 | ||||||
CA_P0070 | HAD phosphatase superfamily protein | 5 | 16 | ||||||
CA_P0072 | hypothetical protein | 2495 | 384.5 | ||||||
CA_P0073 | ABC ATPase containing transporter | 1289.5 | 145 | ||||||
CA_P0074 | hypothetical protein | 1090.5 | 105.5 | ||||||
CA_P0076 | penicillin binding protein 1A | 320 | 106 | ||||||
CA_P0077 | Uncharacterized Fe-S protein | 4 | 2 | ||||||
CA_P0078 | thil Acetyl coenzyme A acetyltransferase (thiolase) | 66.5 | 29.5 | ||||||
CA_P0079 | thlr ThlR, HTH transcriptional regulator TetR/AcrR family | 267 | 76.5 | ||||||
CA_P0080 | Site-Specific Recombinase, Xerd | 67 | 52.5 | ||||||
CA_P0082 | crp CRP (cyclic AMP receptor protein) regulatory protein | 122.5 | 188 | ||||||
CA_P0083 | SAM-dependent methyltransferase | 365 | 90.5 | ||||||
CA_P0084 | hypothetical protein | 260 | 168.5 | ||||||
CA_P0085 | Hypothetical secreted protein (fragment) | 138.5 | 105 | ||||||
CA_P0086 | Permease, MDR related, probably tetracycline resistance protein | 296.5 | 203.5 | ||||||
CA_P0087 | HTH transcriptional regulator TetR/AcrR family | 853.5 | 930 | ||||||
CA_P0088 | abf 3-oxoacyl-acyl-carrier protein synthase | 941.5 | 1379.5 | ||||||
CA_P0089 | Predicted membrane protein | 36.5 | 80.5 | ||||||
CA_P0090 | ABC-type transporter, ATPase component | 66 | 128.5 | ||||||
CA_P0091 | Predicted regulator of stationary/sporulation gene expression | 257.5 | 291.5 | ||||||
CA_P0093 | tnpa TnpA, transposase (3' segment) | 98.5 | 66.5 | ||||||
CA_P0094 | TnpA, transposase (5' segment) | 104.5 | 29 | ||||||
CA_P0096 | ipyr Inorganic pyrophosphatase | 204 | 129 | ||||||
CA_P0097 | lipg Carboxyl esterase, a/b hydrolase | 671.5 | 391 | ||||||
CA_P0098 | amyA alpha-amylase | 81 | 36.5 | ||||||
CA_P0099 | muts DNA mismatch repair protein, MUTS fragment | 11 | 11 | ||||||
CA_P0100 | HTH transcriptional regulator TetR/AcrR family | 85 | 189.5 | ||||||
CA_P0101 | hypothetical protein | 58.5 | 158.5 | ||||||
CA_P0102 | Membrane protein | 197.5 | 1702 | ||||||
CA_P0103 | arsr Transcriptional regulator HTH-type, ArsR family | 68.5 | 77.5 | ||||||
CA_P0104 | arsb Heavy metal resistance membrane protein | 72.5 | 117.5 | ||||||
CA_P0105 | arsc Arsenate reductase, arsC, protein-tyrosine-phosphatase family enzyme | 81 | 195 | ||||||
CA_P0106 | dxs 1-deoxyxylulose-5-phosphate synthase, dehydrogenase | 27 | 15 | ||||||
CA_P0107 | HTH transcriptional regulator MerR family | 50 | 36.5 | ||||||
CA_P0108 | Predicted HTH containing transcriptional regulator | 111 | 105.5 | ||||||
CA_P0110 | NH2-acetyltransferase | 52.5 | 66.5 | ||||||
CA_P0111 | NH2-acetyltransferase | 15 | 23.5 | ||||||
CA_P0112 | hypothetical protein | 838.5 | 4584.5 | ||||||
CA_P0113 | Solo B3/4 domain (OB-fold DNA/RNA-binding) of Phe-aaRS-beta | 990.5 | 461.5 | ||||||
CA_P0114 | Possible beta-xylosidase, family 43 of glycosyl hydrolases | 36 | 37.5 | ||||||
CA_P0116 | Xylanase, glycosyl hydrolase family 10 | 59 | 217 | ||||||
CA_P0117 | Possible beta-xylosidase diverged, family 5/39 of glycosyl hydrolases and alpha-amylase C (Greek key) C-terminal domain | 55 | 251.5 | ||||||
CA_P0118 | Possible xylan degradation enzyme (glycosyl hydrolase family 30-like domain and Ricin B-like domain) | 38 | 244 | ||||||
CA_P0119 | Possible xylan degradation enzyme (glycosyl hydrolase family 30-like domain and Ricin B-like domain) | 24.5 | 189.5 | ||||||
CA_P0120 | Possible xylan degradation enzyme (glycosyl hydrolase family 43-like domain, cellulose-binding domain and Ricin B-like domain) | 28 | 211.5 | ||||||
CA_P0121 | Leu-rich protein family protein, YaeG (E.coli) homolog | 1 | 7 | ||||||
CA_P0123 | hypothetical protein | 127.5 | 96 | ||||||
CA_P0124 | Permease, MDR related, probably tetracycline resistance protein | 507 | 909.5 | ||||||
CA_P0125 | hypothetical protein | 223 | 119 | ||||||
CA_P0126 | Uncharacterized protein (NN.term domain homologous to B.subtilis (gi|833839) | 271 | 159 | ||||||
CA_P0127 | HTH transcriptional regulator TetR family | 62 | 29 |
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4. array (low scan) | pH 4.5 / Cy5 | ||||||||
ORF | Name | (F 635 median - B635) - B635 SD | (F 532 median - B532) - B532 SD | pH 5.7 / Cy3 | |||||
CA_P0002 | Transglutaminase-like predicted protease domain fused ChW-repeats and cell-adhesion domain | 16.5 | 45 | ||||||
CA_P0003 | Transglutaminase-like predicted protease domain fused to ChW-repeats and cell-adhesion domain | 8.5 | 28.5 | ||||||
CA_P0004 | Cysteine protease | 3907 | 131.5 | ||||||
CA_P0005 | Uncharacterized protein similar to Bacteriocin immunity protein of mesC/lccI/entI family | 102 | 33 | ||||||
CA_P0006 | GntR family HTH transcriptional regulator | 269.5 | 312 | ||||||
CA_P0007 | hypothetical protein | 159.5 | 180 | ||||||
CA_P0009 | Response regulator (CheY + HTH domains) | 596 | 133.5 | ||||||
CA_P0010 | bgla Beta_glucosidase | 508.5 | 160 | ||||||
CA_P0012 | pedb Pediocin immunity protein, PedB | 2200 | 842 | ||||||
CA_P0013 | FAD dependent dehydrogenase | 190.5 | 138 | ||||||
CA_P0014 | Protein tyrosine phosphatase II superfamily protein | 389.5 | 371.5 | ||||||
CA_P0015 | GLPQ related phosphodiesterase | 1249.5 | 475.5 | ||||||
CA_P0017 | grkb1 Spore germination protein, GRKB | 10 | 3 | ||||||
CA_P0019 | grkc Spore germination protein, GRKC | 43.5 | 12 | ||||||
CA_P0020 | grka Spore germination protein, GRKA | 88 | 31.5 | ||||||
CA_P0021 | hypothetical protein | 13 | 7 | ||||||
CA_P0023 | hypothetical protein | 3 | 12 | ||||||
CA_P0025 | pdc Pyruvate decarboxylase | 788.5 | 1078.5 | ||||||
CA_P0026 | hypothetical protein | 602 | 485 | ||||||
CA_P0027 | Predicted amino acid permeases | 61 | 28.5 | ||||||
CA_P0028 | HTH transcriptional regulator TetR family | 83 | 92 | ||||||
CA_P0031 | hlyU Transcriptional activator HLYU, HTH of ArsR family | 80.5 | 69 | ||||||
CA_P0032 | Rhodanese-like domain | 21 | 17 | ||||||
CA_P0033 | hypothetical protein | 87.5 | 59 | ||||||
CA_P0034 | Rhodanese-like domain | 636 | 396.5 | ||||||
CA_P0035 | adhe Aldehyde-alcohol dehydrogenase, ADHE1 | 87 | 243 | ||||||
CA_P0036 | Uncharacterized, ortholog of YgaT gene of B.subtillis | 258 | 54827.5 | ||||||
CA_P0037 | Uncharacterized, ortholog of YgaS gene of B.subtillis | 76 | 28223 | ||||||
CA_P0038 | Uncharacterized conserved protein, YCII family | 30.5 | 108.5 | ||||||
CA_P0040 | Xre family DNA-binding domain and TPR repeats containing protein | 233 | 48 | ||||||
CA_P0044 | hypothetical protein | 290 | 37.5 | ||||||
CA_P0045 | Glycosyl transferase | 329 | 25 | ||||||
CA_P0046 | TetR family HTH transcriptional regulator | 12 | 7 | ||||||
CA_P0047 | Sulphohydrolase/Glycosulfatase, Zn-dependent hydrolase | 29 | 18 | ||||||
CA_P0048 | Related to methyl-accepting chemotaxis protein | 124.5 | 173.5 | ||||||
CA_P0049 | Permease, MDR related | 120.5 | 25.5 | ||||||
CA_P0050 | pnba Para-nitrobenzyl esterase, a/b hydrolase | 338 | 427.5 | ||||||
CA_P0051 | Oxidoreductase | 38.5 | 21.5 | ||||||
CA_P0052 | MarR family HTH transcriptional regulator | 58 | 24 | ||||||
CA_P0053 | xynb Xylanase, glycosyl hydrolase family 10 | 1977.5 | 82.5 | ||||||
CA_P0054 | Xylanase/chitin deacetylase family enzyme | 3082.5 | 98 | ||||||
CA_P0055 | hypothetical protein | 221.5 | 75.5 | ||||||
CA_P0056 | pell Pectate lyase, secreted, polysaccharide lyase family | 1006 | 88.5 | ||||||
CA_P0057 | Putative glycoportein or S-layer protein | 455 | 399.5 | ||||||
CA_P0058 | Rare lipoprotein A RLPA releated protein | 1842 | 2759.5 | ||||||
CA_P0059 | Alcohol dehydrogenase | 146 | 155.5 | ||||||
CA_P0061 | hypothetical protein | 1 | 10 | ||||||
CA_P0062 | Hypothetical protein, CF-18 family | 12.5 | 22 | ||||||
CA_P0064 | alf Fructose-bisphosphate aldolase class I | 6.5 | 7 | ||||||
CA_P0065 | Predicted secreted metalloprotease | 1836 | 93 | ||||||
CA_P0066 | ptna Mannose-specific phosphotransferase system component IIAB | 2 | 21 | ||||||
CA_P0067 | manY/levF Mannose/fructose-specific phosphotransferase system component IIC | 3 | 30 | ||||||
CA_P0072 | hypothetical protein | 584 | 1204 | ||||||
CA_P0073 | ABC ATPase containing transporter | 153.5 | 339.5 | ||||||
CA_P0074 | hypothetical protein | 154.5 | 348.5 | ||||||
CA_P0076 | penicillin binding protein 1A | 119.5 | 179.5 | ||||||
CA_P0077 | Uncharacterized Fe-S protein | 3.5 | 8.5 | ||||||
CA_P0078 | thil Acetyl coenzyme A acetyltransferase (thiolase) | 31 | 76.5 | ||||||
CA_P0079 | thlr ThlR, HTH transcriptional regulator TetR/AcrR family | 122.5 | 172.5 | ||||||
CA_P0080 | Site-Specific Recombinase, Xerd | 51 | 42 | ||||||
CA_P0081 | TnpR resolvase C-terminal fragment | 22 | 24 | ||||||
CA_P0082 | crp CRP (cyclic AMP receptor protein) regulatory protein | 249 | 92 | ||||||
CA_P0083 | SAM-dependent methyltransferase | 117.5 | 286 | ||||||
CA_P0084 | hypothetical protein | 210 | 219.5 | ||||||
CA_P0085 | Hypothetical secreted protein (fragment) | 120.5 | 101.5 | ||||||
CA_P0086 | Permease, MDR related, probably tetracycline resistance protein | 223 | 257 | ||||||
CA_P0087 | HTH transcriptional regulator TetR/AcrR family | 1078.5 | 746.5 | ||||||
CA_P0088 | abf 3-oxoacyl-acyl-carrier protein synthase | 1604 | 935.5 | ||||||
CA_P0089 | Predicted membrane protein | 110 | 40 | ||||||
CA_P0090 | ABC-type transporter, ATPase component | 133 | 72 | ||||||
CA_P0091 | Predicted regulator of stationary/sporulation gene expression | 554 | 199 | ||||||
CA_P0093 | tnpa TnpA, transposase (3' segment) | 54 | 75 | ||||||
CA_P0094 | TnpA, transposase (5' segment) | 27 | 56 | ||||||
CA_P0096 | ipyr Inorganic pyrophosphatase | 155 | 138.5 | ||||||
CA_P0097 | lipg Carboxyl esterase, a/b hydrolase | 462.5 | 400 | ||||||
CA_P0098 | amyA alpha-amylase | 47 | 48.5 | ||||||
CA_P0099 | muts DNA mismatch repair protein, MUTS fragment | 24.5 | 4 | ||||||
CA_P0100 | HTH transcriptional regulator TetR/AcrR family | 163.5 | 75 | ||||||
CA_P0101 | hypothetical protein | 205 | 73.5 | ||||||
CA_P0102 | Membrane protein | 1998 | 154 | ||||||
CA_P0103 | arsr Transcriptional regulator HTH-type, ArsR family | 141 | 36 | ||||||
CA_P0104 | arsb Heavy metal resistance membrane protein | 141 | 44 | ||||||
CA_P0105 | arsc Arsenate reductase, arsC, protein-tyrosine-phosphatase family enzyme | 141 | 54 | ||||||
CA_P0106 | dxs 1-deoxyxylulose-5-phosphate synthase, dehydrogenase | 18.5 | 28 | ||||||
CA_P0107 | HTH transcriptional regulator MerR family | 51.5 | 38 | ||||||
CA_P0108 | Predicted HTH containing transcriptional regulator | 114.5 | 76 | ||||||
CA_P0110 | NH2-acetyltransferase | 56 | 42 | ||||||
CA_P0112 | hypothetical protein | 4686.5 | 784.5 | ||||||
CA_P0113 | Solo B3/4 domain (OB-fold DNA/RNA-binding) of Phe-aaRS-beta | 658 | 591.5 | ||||||
CA_P0114 | Possible beta-xylosidase, family 43 of glycosyl hydrolases | 19 | 16 | ||||||
CA_P0115 | xynD Endo-1,4-beta-xylanase XynD B.subtilis ortholog (family 43 glycosyl hydrolase and cellulose-binding domain) | 9 | 4 | ||||||
CA_P0116 | Xylanase, glycosyl hydrolase family 10 | 224.5 | 53 | ||||||
CA_P0117 | Possible beta-xylosidase diverged, family 5/39 of glycosyl hydrolases and alpha-amylase C (Greek key) C-terminal domain | 339.5 | 45 | ||||||
CA_P0118 | Possible xylan degradation enzyme (glycosyl hydrolase family 30-like domain and Ricin B-like domain) | 262.5 | 27.5 | ||||||
CA_P0119 | Possible xylan degradation enzyme (glycosyl hydrolase family 30-like domain and Ricin B-like domain) | 224 | 17 | ||||||
CA_P0120 | Possible xylan degradation enzyme (glycosyl hydrolase family 43-like domain, cellulose-binding domain and Ricin B-like domain) | 199.5 | 15 | ||||||
CA_P0123 | hypothetical protein | 102 | 79.5 | ||||||
CA_P0124 | Permease, MDR related, probably tetracycline resistance protein | 1062.5 | 421 |