Selected Cell
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Read me_data
Transcriptome_data
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1. Array
2. Array
3. Array
4. Array
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Description: | This data-sheet reflects the transcriptome of C. acetobutylicum concerning the comparison of acidogenesis to solventogenesis. Genes with average fold regulation > 1.0 (significant > 3.0) showed elevated transcript level in the acidogenesis (pH 5.7) or repressed transcript level in the solventogenesis (pH 4.5), respectively. Genes were figured out as significant induced, if the average fold regulation was > 3.0 and at least three out of four micro arrays were > 2.0.Furthermore, genes with fold regulation < 1.0 (significant < 0.33) showed elevated transcript level in the solventogenesis (pH 4.5) or repressed transcript level in the acidogenesis (pH 5.7), respectively. Genes were figured out as significant induced, if the average fold regulation was < 0.33 and at least three out of four micro arrays were < 0.5. | ||||||||
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ORF | Name | Array 1 | Array 2 | Array 3 | Array 4 | Average | Standard deviation | ||
CA_P0002 | Transglutaminase-like predicted protease domain fused ChW-repeats and cell-adhesion domain | 1.137 | 1.0828370330265296 | 2.4875 | 1.662510390689942 | 1.592461855929118 | 0.6514504429575791 | ||
CA_P0003 | Transglutaminase-like predicted protease domain fused to ChW-repeats and cell-adhesion domain | 1.5430000000000001 | 1.4598540145985401 | 1.5985 | 1.547987616099071 | 1.5373354076744028 | 0.05741669553324797 | ||
CA_P0004 | Cysteine protease | 0.022 | 0.0196645232336342 | 0.0415 | 0.036404011722091775 | 0.029892133738931494 | 0.010708826664698436 | ||
CA_P0005 | Uncharacterized protein similar to Bacteriocin immunity protein of mesC/lccI/entI family | 1.7045 | 1.4357501794687724 | 0.6385000000000001 | 0.39401103230890466 | 1.0431903029444192 | 0.6262698403501651 | ||
CA_P0006 | GntR family HTH transcriptional regulator | 0.9925 | 0.9925558312655086 | 0.9864999999999999 | 1.1389521640091116 | 1.027626998818655 | 0.0742711592209243 | ||
CA_P0007 | hypothetical protein | 1.155 | 1.106194690265487 | 1.58 | 1.0834236186348862 | 1.2311545772250934 | 0.23447249881260057 | ||
CA_P0009 | Response regulator (CheY + HTH domains) | 0.2465 | 0.2800336040324839 | 0.5075 | 0.23975065931431316 | 0.3184460658366993 | 0.1272610317963096 | ||
CA_P0010 | bgla Beta_glucosidase | 0.2975 | 0.32010243277848915 | 0.34650000000000003 | 0.3337226764558652 | 0.3244562773085886 | 0.020955418645163666 | ||
CA_P0012 | pedb Pediocin immunity protein, PedB | 0.763 | 0.6472491909385114 | 0.8755 | 0.3861749372465727 | 0.667981032046271 | 0.20971187427320875 | ||
CA_P0013 | FAD dependent dehydrogenase | 1.5255 | 1.17096018735363 | 1.764 | 0.7215007215007215 | 1.2954902272135878 | 0.4536436142574396 | ||
CA_P0014 | Protein tyrosine phosphatase II superfamily protein | 1.2175 | 1.0065425264217414 | 1.9925 | 0.9438414346389807 | 1.2900959902651805 | 0.4826787595781291 | ||
CA_P0015 | GLPQ related phosphodiesterase | 0.971 | 0.9103322712790168 | 0.7044999999999999 | 0.3896356906292616 | 0.7438669904770696 | 0.26225284711419483 | ||
CA_P0018 | hypothetical protein | 0.739 | 0.8779631255487269 | 0.508 | 0.7083210418495757 | 0.1868798475527586 | |||
CA_P0019 | grkc Spore germination protein, GRKC | 0.7225 | 0.9025270758122743 | 0.5569999999999999 | 0.5060728744939271 | 0.6720249875765504 | 0.1793040166530483 | ||
CA_P0020 | grka Spore germination protein, GRKA | 0.6765 | 0.7037297677691766 | 0.531 | 0.48250904704463216 | 0.5984347037034522 | 0.10827039936785426 | ||
CA_P0025 | pdc Pyruvate decarboxylase | 1.137 | 1.1173184357541899 | 2.144 | 1.358695652173913 | 1.4392535219820257 | 0.48240942499147804 | ||
CA_P0026 | hypothetical protein | 1.0845 | 1.1554015020219528 | 1.6505 | 1.3245033112582782 | 1.3037262033200578 | 0.25215345824543517 | ||
CA_P0027 | Predicted amino acid permeases | 0.877 | 0.7840062720501764 | 0.353 | 0.556947925368978 | 0.6427385493547886 | 0.2353320029802095 | ||
CA_P0028 | HTH transcriptional regulator TetR family | 1.2015 | 0.921234454168586 | 1.819 | 1.1061946902654867 | 1.2619822861085181 | 0.3891468019964196 | ||
CA_P0031 | hlyU Transcriptional activator HLYU, HTH of ArsR family | 1.1125 | 0.9960159362549801 | 1.0485 | 0.8616975441619993 | 1.0046783701042448 | 0.1065588936807836 | ||
CA_P0032 | Rhodanese-like domain | 0.9239999999999999 | 0.8417508417508418 | 1.278 | 0.8361204013377926 | 0.9699678107721585 | 0.20924593933533983 | ||
CA_P0033 | hypothetical protein | 0.8845000000000001 | 0.8186655751125665 | 1.119 | 0.721240533717995 | 0.8858515272076404 | 0.16928355731116965 | ||
CA_P0034 | Rhodanese-like domain | 0.835 | 0.7140307033202428 | 0.8405 | 0.6273525721455459 | 0.7542208188664471 | 0.10276213734532307 | ||
CA_P0035 | adhe Aldehyde-alcohol dehydrogenase, ADHE1 | 2.8995 | 3.3783783783783785 | 2.9415 | 2.306805074971165 | 2.8815458633373856 | 0.44010846062459397 | ||
CA_P0036 | Uncharacterized, ortholog of YgaT gene of B,subtillis | 90.372 | 19.047619047619047 | 269.9845 | 200 | 144.85102976190478 | 111.7948375720697 | ||
CA_P0037 | Uncharacterized, ortholog of YgaS gene of B,subtillis | 114.935 | 54.054054054054056 | 451.8835 | 250 | 217.7181385135135 | 176.28182096269487 | ||
CA_P0038 | Uncharacterized conserved protein, YCII family | 4.164 | 3.361344537815126 | 3.1865 | 2.5380710659898478 | 3.312478900951244 | 0.6690924726637282 | ||
CA_P0040 | Xre family DNA-binding domain and TPR repeats containing protein | 0.2145 | 0.1866019779809666 | 0.25549310168625444 | 0.21886502655574036 | 0.034652371116109144 | |||
CA_P0044 | hypothetical protein | 0.1835 | 0.16975046681378375 | 0.2865 | 0.18589088205223533 | 0.20641033721650476 | 0.05386474349185711 | ||
CA_P0045 | Glycosyl transferase | 0.1895 | 0.1760098565519669 | 0.226 | 0.14084507042253522 | 0.18308873174362553 | 0.03519999384382431 | ||
CA_P0046 | TetR family HTH transcriptional regulator | 0.467 | 0.4428697962798937 | 0.364 | 0.6353240152477764 | 0.4772984528819175 | 0.11416363740068204 | ||
CA_P0047 | Sulphohydrolase/Glycosulfatase, Zn-dependent hydrolase | 0.87 | 0.9170105456212746 | 0.7625 | 0.6966213862765587 | 0.8115329829744583 | 0.10025437110472638 | ||
CA_P0048 | Related to methyl-accepting chemotaxis protein | 1.509 | 1.6949152542372883 | 1.675 | 1.3793103448275863 | 1.5645563997662186 | 0.14898974707108825 | ||
CA_P0049 | Permease, MDR related | 0.816 | 0.9128251939753538 | 0.4305 | 0.3269042170644001 | 0.6215573527599384 | 0.2863379593015107 | ||
CA_P0050 | pnba Para-nitrobenzyl esterase, a/b hydrolase | 0.98 | 1.1217049915872126 | 1.3225 | 1.2399256044637321 | 1.1660326490127362 | 0.14890185638174003 | ||
CA_P0052 | MarR family HTH transcriptional regulator | 1.439 | 1.4275517487508922 | 0.4505 | 0.49443757725587145 | 0.9528723315016909 | 0.5550318437106448 | ||
CA_P0053 | xynb Xylanase, glycosyl hydrolase family 10 | 0.059 | 0.06588917440864465 | 0.051000000000000004 | 0.04826021910139472 | 0.056037348377509844 | 0.00799363078202049 | ||
CA_P0054 | Xylanase/chitin deacetylase family enzyme | 0.0595 | 0.05707436790137549 | 0.061 | 0.036093264996751605 | 0.053416908224531774 | 0.011661802496399558 | ||
CA_P0055 | hypothetical protein | 1.02 | 0.9259259259259258 | 0.503 | 0.37814331631688414 | 0.7067673105607024 | 0.31393208547289375 | ||
CA_P0056 | pell Pectate lyase, secreted, polysaccharide lyase family | 0.101 | 0.09124920156948627 | 0.159 | 0.11145165784341042 | 0.11567521485322417 | 0.03003812853555221 | ||
CA_P0057 | Putative glycoportein or S-layer protein | 0.6134999999999999 | 0.5497526113249038 | 1.396 | 0.8726003490401397 | 0.8579632400912608 | 0.3849042597027415 | ||
CA_P0058 | Rare lipoprotein A RLPA releated protein | 1.2525 | 1.187648456057007 | 1.455 | 1.4936519790888723 | 1.3472001087864698 | 0.1499931191239491 | ||
CA_P0059 | Alcohol dehydrogenase | 1.0234999999999999 | 0.8583690987124464 | 0.9135 | 1.0060362173038229 | 0.9503513290040673 | 0.07803906285148514 | ||
CA_P0062 | Hypothetical protein, CF-18 family | 1.08 | 0.9657170449058428 | 1.2865000000000002 | 1.4492753623188408 | 1.195373101806171 | 0.2151149510992163 | ||
CA_P0064 | alf Fructose-bisphosphate aldolase class I | 0.755 | 0.54421768707483 | 0.7993605115907275 | 0.6995260662218525 | 0.13631758221925774 | |||
CA_P0065 | Predicted secreted metalloprotease | 0.0665 | 0.06532745386248572 | 0.067 | 0.05780848050408996 | 0.06415898359164393 | 0.004291306883130686 | ||
CA_P0066 | ptna Mannose-specific phosphotransferase system component IIAB | 1.6455 | 1.773049645390071 | 1.8195000000000001 | 1.6920473773265652 | 1.732524255679159 | 0.07835535733454028 | ||
CA_P0067 | manY/levF Mannose/fructose-specific phosphotransferase system component IIC | 1.48 | 1.7889087656529519 | 1.4769999999999999 | 2.066115702479339 | 1.7030061170330728 | 0.2828652973020924 | ||
CA_P0072 | hypothetical protein | 1.9565000000000001 | 2.109704641350211 | 6.0375 | 2.0242914979757085 | 3.03199903483148 | 2.004647571156857 | ||
CA_P0073 | ABC ATPase containing transporter | 2.657 | 2.398081534772182 | 7.5625 | 2.1052631578947367 | 3.6807111731667295 | 2.597655628979498 | ||
CA_P0074 | hypothetical protein | 2.937 | 2.2050716648291067 | 8.293500000000002 | 2.0120724346076457 | 3.8619110248591886 | 2.9811329347204207 | ||
CA_P0076 | penicillin binding protein 1A | 1.4595 | 1.3783597518952446 | 2.3195 | 1.402524544179523 | 1.639971074018692 | 0.454294584382796 | ||
CA_P0079 | thlr ThlR, HTH transcriptional regulator TetR/AcrR family | 1.09 | 0.9900990099009901 | 2.6255 | 1.3280212483399734 | 1.5084050645602407 | 0.7580992415872404 | ||
CA_P0080 | Site-Specific Recombinase, Xerd | 0.8565 | 0.9237875288683602 | 0.9375 | 0.8554319931565441 | 0.893304880506226 | 0.043479325598566904 | ||
CA_P0081 | TnpR resolvase C-terminal fragment | 1.097 | 0.9803921568627451 | 0.8818342151675486 | 0.9864087906767646 | 0.10770899986760639 | |||
CA_P0082 | crp CRP (cyclic AMP receptor protein) regulatory protein | 0.9535 | 0.856898029134533 | 0.6065 | 0.39992001599680066 | 0.7042045112828333 | 0.25006584245297725 | ||
CA_P0083 | SAM-dependent methyltransferase | 2.0105 | 1.8034265103697025 | 3.0140000000000002 | 2.157497303128371 | 2.2463559533745183 | 0.5319736097044261 | ||
CA_P0084 | hypothetical protein | 1.229 | 1.2172854534388313 | 1.3385 | 0.9794319294809012 | 1.1910543457299332 | 0.15127481803197904 | ||
CA_P0085 | Hypothetical secreted protein (fragment) | 1.1804999999999999 | 1.0834236186348862 | 1.1355 | 0.8572653236176596 | 1.0641722355631364 | 0.14352802829578543 | ||
CA_P0086 | Permease, MDR related, probably tetracycline resistance protein | 0.9225 | 0.9930486593843098 | 1.332 | 1.124859392575928 | 1.0931020129900595 | 0.1799967590074701 | ||
CA_P0087 | HTH transcriptional regulator TetR/AcrR family | 1.54 | 1.2944983818770228 | 0.897 | 0.6918021445866482 | 1.1058251316159178 | 0.3825913316161554 | ||
CA_P0088 | abf 3-oxoacyl-acyl-carrier protein synthase | 0.9844999999999999 | 1.0775862068965518 | 0.667 | 0.5885815185403179 | 0.8294169313592175 | 0.23806140885603527 | ||
CA_P0089 | Predicted membrane protein | 1.0375 | 1.0389610389610389 | 0.4125 | 0.42589437819420783 | 0.7287138542888117 | 0.35744138732879893 | ||
CA_P0090 | ABC-type transporter, ATPase component | 1.1405 | 1.1820330969267139 | 0.46399999999999997 | 0.5374899220639613 | 0.8310057547476688 | 0.38290627698150487 | ||
CA_P0091 | Predicted regulator of stationary/sporulation gene expression | 0.7835000000000001 | 0.6281407035175879 | 0.8320000000000001 | 0.3787161522438932 | 0.6555892139403704 | 0.20403761715770213 | ||
CA_P0093 | tnpa TnpA, transposase (3' segment) | 0.8705 | 1.1092623405435387 | 1.1055000000000001 | 1.1494252873563218 | 1.0586719069749653 | 0.12701326031856566 | ||
CA_P0094 | TnpA, transposase (5' segment) | 1.0154999999999998 | 0.924214417744917 | 1.7719999999999998 | 1.4064697609001406 | 1.2795460446612643 | 0.38927342860810543 | ||
CA_P0096 | ipyr Inorganic pyrophosphatase | 0.782 | 0.8240626287597858 | 1.361 | 0.8695652173913044 | 0.9591569615377726 | 0.2702712069692132 | ||
CA_P0097 | lipg Carboxyl esterase, a/b hydrolase | 0.8345 | 0.7821666014861164 | 1.664 | 0.8517887563884157 | 1.033113839468633 | 0.4216310024905598 | ||
CA_P0098 | amyA alpha-amylase | 0.885 | 1.0822510822510822 | 1.385 | 1 | 1.0880627705627706 | 0.21384966237578326 | ||
CA_P0099 | muts DNA mismatch repair protein, MUTS fragment | 0.9844999999999999 | 0.84530853761623 | 0.467 | 0.4065040650406504 | 0.6758281506642201 | 0.2829290675184528 | ||
CA_P0100 | HTH transcriptional regulator TetR/AcrR family | 0.7195 | 0.6583278472679394 | 0.4235 | 0.4921259842519685 | 0.5733634578799769 | 0.13860425623103106 | ||
CA_P0101 | hypothetical protein | 0.6639999999999999 | 0.6209251785159888 | 0.411 | 0.4094165813715456 | 0.5263354399718836 | 0.13524179942543763 | ||
CA_P0102 | Membrane protein | 0.1095 | 0.09655771737556124 | 0.1225 | 0.08394191219675984 | 0.10312490739308026 | 0.01660473134081345 | ||
CA_P0103 | arsr Transcriptional regulator HTH-type, ArsR family | 0.733 | 0.5107252298263534 | 0.711 | 0.3293265272517701 | 0.5710129392695309 | 0.18963395852710238 | ||
CA_P0104 | arsb Heavy metal resistance membrane protein | 0.601 | 0.6489292667099287 | 0.6025 | 0.36737692872887584 | 0.5549515488597011 | 0.12701360114547103 | ||
CA_P0105 | arsc Arsenate reductase, arsC, protein-tyrosine-phosphatase family enzyme | 0.4445 | 0.5457025920873124 | 0.398 | 0.44964028776978415 | 0.4594607199642742 | 0.06200899030557114 | ||
CA_P0108 | Predicted HTH containing transcriptional regulator | 1.0405 | 0.8126777732629011 | 0.9059999999999999 | 0.7320644216691068 | 0.872810548733002 | 0.1324722797554954 | ||
CA_P0110 | NH2-acetyltransferase | 1.29 | 1.4074595355383532 | 0.654 | 0.8028904054596547 | 1.038587485249502 | 0.3663948185994026 | ||
CA_P0111 | NH2-acetyltransferase | 1.363 | 1.8281535648994514 | 0.469 | 1.220051188299817 | 0.6907607221893789 | |||
CA_P0112 | hypothetical protein | 0.267 | 0.24663953631767171 | 0.184 | 0.1697648756472286 | 0.2168511029912251 | 0.04725311419885985 | ||
CA_P0113 | Solo B3/4 domain (OB-fold DNA/RNA-binding) of Phe-aaRS-beta | 1.0339999999999998 | 0.7246376811594204 | 2.043 | 0.891662951404369 | 1.1733251581409474 | 0.5934082015378999 | ||
CA_P0114 | Possible beta-xylosidase, family 43 of glycosyl hydrolases | 0.355 | 0.36094567767550984 | 0.6619999999999999 | 0.7215007215007215 | 0.5248615997940578 | 0.19424664527792485 | ||
CA_P0116 | Xylanase, glycosyl hydrolase family 10 | 0.165 | 0.1679684219366759 | 0.279 | 0.2787456445993031 | 0.22267851663399474 | 0.06489899349428342 | ||
CA_P0117 | Possible beta-xylosidase diverged, family 5/39 of glycosyl hydrolases and alpha-amylase C (Greek key) C-terminal domain | 0.1245 | 0.12394645513138325 | 0.2225 | 0.19303156066016794 | 0.16599450394788778 | 0.049711520418359016 | ||
CA_P0118 | Possible xylan degradation enzyme (glycosyl hydrolase family 30-like domain and Ricin B-like domain) | 0.1395 | 0.16242995208316416 | 0.1785 | 0.1580403002765705 | 0.1596175630899337 | 0.016038080290065253 | ||
CA_P0119 | Possible xylan degradation enzyme (glycosyl hydrolase family 30-like domain and Ricin B-like domain) | 0.0925 | 0.0898069151324652 | 0.1515 | 0.12122681537156019 | 0.11375843262600635 | 0.028900973435956795 | ||
CA_P0120 | Possible xylan degradation enzyme (glycosyl hydrolase family 43-like domain, cellulose-binding domain and Ricin B-like domain) | 0.094 | 0.10471752447772134 | 0.1555 | 0.12634238787113078 | 0.12013997808721304 | 0.027141306567280508 | ||
CA_P0121 | Leu-rich protein family protein, YaeG (E,coli) homolog | 0.34 | 0.4024144869215292 | 0.287 | 0.34313816230717636 | 0.057771203854858476 | |||
CA_P0123 | hypothetical protein | 0.7295 | 0.723589001447178 | 1.0745 | 0.7864726700747149 | 0.8285154178804732 | 0.16642276800081074 | ||
CA_P0124 | Permease, MDR related, probably tetracycline resistance protein | 0.9065000000000001 | 0.8012820512820513 | 0.5505 | 0.4025764895330113 | 0.6652146352037657 | 0.23012403327653436 | ||
CA_P0125 | hypothetical protein | 1.3725 | 1.2077294685990336 | 1.5325 | 1.5600624024960998 | 1.4181979677737833 | 0.16286575843687204 | ||
CA_P0126 | Uncharacterized protein (NN,term domain homologous to B,subtilis (gi|833839) | 1.2885 | 1.2070006035003018 | 1.4875 | 1.5936254980079683 | 1.3941565253770676 | 0.1776621472959332 | ||
CA_P0127 | HTH transcriptional regulator TetR family | 1.5485 | 1.2539184952978057 | 1.226 | 1.1820330969267139 | 1.3026128980561298 | 0.1665739438921093 | ||
CA_P0128 | Permease, MDR related | 0.295 | 0.2476166893648632 | 0.049 | 0.04119125097829221 | 0.15820198508578887 | 0.1320672450797133 | ||
CA_P0129 | Glycogen-binding regulatory subunit of S/T protein phosphatase I | 0.194 | 0.20986358866736624 | 0.2235 | 0.24786218862312556 | 0.21880644432262297 | 0.02281520026177667 | ||
CA_P0131 | Permease, MDR related | 1.238 | 1.2135922330097089 | 0.33799999999999997 | 0.5986231667165519 | 0.8470538499315653 | 0.4502010310278794 | ||
CA_P0132 | hypothetical protein | 1.097 | 1.6406890894175552 | 0.6105006105006106 | 1.1160632333060552 | 0.5153587397836222 | |||
CA_P0133 | Antibiotic-resistance protein, alpha/beta superfamily hydrolase | 0.7195 | 0.7132667617689015 | 1.0375 | 1.1655011655011656 | 0.9089419818175168 | 0.22841981451372254 |
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Description: | The single sheets contain the transcript amount of the genes for all four microarrays (sheet 1 to 4). The first biological experiment will be represented by the 1. and 2. array. The 3. and 4. array showed the transcript level of the second biological experiment. The 1. and 3. array the cDNA of pH 4.5 was labeled by Cy3 and pH 5.7 by Cy5, respectively. The 2. and 4. array contained the transcript level of the dyeflip (pH 4.5 Cy5 / pH 5.7 Cy3). Furthermore, the 1. and 2. array were evaluated under high scanning conditions and the 3. and 4. array under low scanning conditions. | ||||||||
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CAC2186 | Glycosyltransferase | 265 | 176.5 | ||||||
CAC2187 | spsE Sialic acid synthase | 393.5 | 298.5 | ||||||
CAC2189 | hypothetical protein | 259.5 | 281.5 | ||||||
CAC2190 | spsF Spore coat polysaccharide biosynthesis protein F | 543 | 422.5 | ||||||
CAC2192 | Lactoylglutathione lyase, YQJC B,subtilis ortholog | 342.5 | 321 | ||||||
CAC2193 | Ucharacterized protein, CGEB homolog | 262 | 190 | ||||||
CAC2194 | Predicted nucleoside-diphosphate sugar epimerase | 620 | 470.5 | ||||||
CAC2195 | Protein containing aminopeptidase domain | 312 | 261 | ||||||
CAC2196 | hypothetical protein | 138 | 48 | ||||||
CAC2197 | Aminoglycoside N3'-acetyltransferase | 329 | 275 | ||||||
CAC2198 | acpA Acyl carrier protein | 567.5 | 520.5 | ||||||
CAC2199 | hypothetical protein | 428 | 297.5 | ||||||
CAC2200 | hypothetical protein | 619.5 | 751 | ||||||
CAC2201 | hypothetical protein | 685 | 499 | ||||||
CAC2202 | hypothetical protein | 166.5 | 212 | ||||||
CAC2203 | hag Possible hook-associated protein, flagellin family | 35110.5 | 45404 | ||||||
CAC2204 | hypothetical protein | 4747.5 | 5005 | ||||||
CAC2205 | fliD Flagellar hook-associated protein FliD | 5478 | 7325 | ||||||
CAC2206 | fliS Flagellar protein FliS | 4827 | 5867.5 | ||||||
CAC2207 | hypothetical protein | 5044 | 5655.5 | ||||||
CAC2208 | Flagellin family protein, YVYC B,subtilis ortholog | 3646 | 4330.5 | ||||||
CAC2209 | csrA Carbon storage regulator, csrA | 2494 | 2697.5 | ||||||
CAC2210 | Uncharacterized protein, YVIF B,subtilis homolog | 2166 | 2390.5 | ||||||
CAC2211 | flgL Flagellin | 1882.5 | 2421.5 | ||||||
CAC2212 | FlgK Flagellar hook-associated protein FlgK | 2929 | 4078.5 | ||||||
CAC2213 | hypothetical protein | 2905.5 | 3392.5 | ||||||
CAC2214 | flgm Regulator of flagellin synthesis, FLGM | 1985.5 | 2099.5 | ||||||
CAC2215 | fliY flagellar motor switch protein | 3407.5 | 5001.5 | ||||||
CAC2216 | FliM Flagellar switch protein FliM | 6827.5 | 7618.5 | ||||||
CAC2217 | cheW Chemotaxis signal transduction protein CheW | 6302 | 6794 | ||||||
CAC2218 | cheY Chemotaxis signal receiving protein CheY | 9760.5 | 10475 | ||||||
CAC2219 | cheC Chemotaxis protein CheC | 3437 | 3586 | ||||||
CAC2220 | cheA Chemotaxis histidine kinase, CheA (contains CheW-like adaptor domain) | 2859 | 3304.5 | ||||||
CAC2221 | cheR Chemotaxis protein methyltransferase, cheR | 4787 | 5756 | ||||||
CAC2222 | cheB Chemotaxis protein CheB, (CheY-like receiver domain and methylesterase domain) | 3277.5 | 3204.5 | ||||||
CAC2223 | cheD Chemotaxis protein CheD | 4385 | 4720 | ||||||
CAC2224 | cheW Chemotaxis protein CheW | 3983 | 4470.5 | ||||||
CAC2225 | hypothetical protein | 2232.5 | 2770 | ||||||
CAC2226 | Enzyme of ILVE/PABC family (branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase) | 3519 | 3093 | ||||||
CAC2227 | Phosphoserine phosphatase family enzyme | 2539 | 1894 | ||||||
CAC2228 | hypothetical protein | 3634 | 3602 | ||||||
CAC2229 | Pyruvate ferredoxin oxidoreductase | 27520 | 23895.5 | ||||||
CAC2230 | Uncharacterized protein of PR1 family, YkwD B,subtilis ortholog | 698.5 | 652.5 | ||||||
CAC2232 | recJ SsDNA Exonuclease, RecJ | 394.5 | 361 | ||||||
CAC2233 | trmU tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase | 2773 | 2552 | ||||||
CAC2234 | nifS NifS family enzyme (cysteine desulfurase/cysteine sulfinate desulfinase) | 2200.5 | 1061 | ||||||
CAC2236 | Uncharacterized conserved protein of YjeB/RRF2 family | 21146 | 4582 | ||||||
CAC2238 | glgC ADP-glucose pyrophosphorylase | 124 | 5 | ||||||
CAC2241 | Cation transport P-type ATPase | 91.5 | 70 | ||||||
CAC2242 | Predicted transcriptional regulator, arsE family | 313 | 241.5 | ||||||
CAC2245 | Stress-induced protein OsmC | 82 | 13 | ||||||
CAC2246 | Lysophospholipase L2 PLDB, hydrolase of alpha/beta superfamily | 212 | 119.5 | ||||||
CAC2252 | Alpha-glucosidase fused to unknown alpha-amylase C-terminal, domain | 739.5 | 326.5 | ||||||
CAC2253 | Membrane-associated sensory histidine kinase-like ATPase | 387 | 315 | ||||||
CAC2254 | Response regulator (CheY-like receiver domain and HTH-type DNA-binding domain) | 210 | 191 | ||||||
CAC2257 | hypothetical protein | 105 | 14 | ||||||
CAC2258 | hypothetical protein | 214 | 239 | ||||||
CAC2259 | Predicted transcriptional regulator of MarR-family | 628.5 | 963.5 | ||||||
CAC2260 | Spore coat polysaccharide biosynthesis protein, Pyridoxal-dependent enzyme | 235.5 | 247.5 | ||||||
CAC2261 | HD-hydrolase domain containing protein, YHAM B,subtilis ortholog | 2796 | 2227.5 | ||||||
CAC2262 | addA ATP-dependent exonuclease (exonuclease V) synthesis protein AddA (helicase and exonuclease domains) | 1185.5 | 1023.5 | ||||||
CAC2263 | addB ATP-dependent exonuclease synthesis protein AddB (superfamily I helicase) | 591 | 499 | ||||||
CAC2264 | glyA Glycine hydroxymethyltransferase | 4613 | 3996 | ||||||
CAC2265 | hypothetical protein | 418.5 | 551.5 | ||||||
CAC2266 | Uncharacterized conserved membrane protein (fragment) | 63 | 39 | ||||||
CAC2267 | hypothetical protein | 31 | 34 | ||||||
CAC2268 | Uncharacterized protein of YOHL family | 364.5 | 622 | ||||||
CAC2269 | aspS aspartyl-tRNA synthetase | 4548.5 | 5065 | ||||||
CAC2270 | hypothetical protein | 2430.5 | 2822 | ||||||
CAC2271 | coproporphyrinogen III oxidase | 2680.5 | 2180.5 | ||||||
CAC2272 | Predicted Zn-dependent hydrolase of metallo-beta-lactamase superfamily | 2680.5 | 2502 | ||||||
CAC2273 | D-tyrosyl-tRNA deacylase | 1404 | 1395.5 | ||||||
CAC2274 | spoT RelA/SpoT protein, (p)ppGpp synthetase/pyrophosphohydrolase | 1406 | 1572.5 | ||||||
CAC2275 | apt adenine phosphoribosyltransferase | 1085.5 | 1121.5 | ||||||
CAC2276 | Protein related to N-terminal domain of SS-DNA-specific exonuclease RecJ | 371.5 | 338 | ||||||
CAC2277 | secF protein export protein SecF | 823.5 | 2272 | ||||||
CAC2278 | secD protein export protein SecD | 1799.5 | 4839.5 | ||||||
CAC2279 | Heme biosynthesis (nirJ-2) family protein | 3863.5 | 3028 | ||||||
CAC2280 | Predicted membrane protein | 1812 | 2185 | ||||||
CAC2281 | yajC preprotein translocase subunit YajC | 1216.5 | 1299 | ||||||
CAC2282 | tgt queuine tRNA-ribosyltransferase | 1123.5 | 1140 | ||||||
CAC2283 | queA S-adenosylmethionine tRNA ribosyltransferase-isomerase | 1404.5 | 1425.5 | ||||||
CAC2284 | ruvB Holliday junction DNA helicase RuvB | 720 | 706.5 | ||||||
CAC2285 | ruvA Holliday junction DNA helicase motor protein | 529.5 | 573 | ||||||
CAC2286 | Uncharacterized protein, similar to protein from Clostridium histolyticum (GI 3892648) | 557.5 | 651.5 | ||||||
CAC2287 | Acyl-CoA reductase LuxC | 269.5 | 473 | ||||||
CAC2288 | Acyl-protein synthetase, luxE | 218 | 308 | ||||||
CAC2289 | Biotin carboxyl carrier protein | 208 | 347 | ||||||
CAC2293 | Hypothetical secreted protein | 232.5 | 2249.5 | ||||||
CAC2295 | hypothetical protein | 5921.5 | 5719 | ||||||
CAC2296 | Uncharacterized protein, YigZ family | 717 | 934 | ||||||
CAC2297 | Transcriptional regulator of MocR family (DNA-binding HTH domain and aminotransferase domain) | 604 | 526.5 | ||||||
CAC2298 | Predicted nucleotidyltransferase | 1423 | 1218.5 | ||||||
CAC2299 | hflX Predicted GTPase, HflX | 1020 | 646 | ||||||
CAC2301 | mrcB Membrane carboxypeptidase mrcB | 761 | 651 | ||||||
CAC2306 | sporulation sigma factor SigF | 272 | 304 | ||||||
CAC2307 | anti-sigma F factor | 650 | 531 | ||||||
CAC2308 | spoIIAA Anti-anti-sigma factor (antagonist of SpoIIAB) | 633 | 502.5 | ||||||
CAC2309 | DNA modification methyltransferase | 55 | 56 | ||||||
CAC2310 | Methenyl tetrahydrofolate cyclohydrolase (serine cycle enzyme) | 326 | 377.5 |
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2. array (high scan) | pH 4.5 / Cy5 | ||||||||||
ORF | Name | (F 635 median - B635) - B635 SD | (F 532 median - B532) - B532 SD | pH 5.7 / Cy3 | |||||||
CA_P0001 | Oxidoreductase | 89 | 117 | ||||||||
CA_P0002 | Transglutaminase-like predicted protease domain fused ChW-repeats and cell-adhesion domain | 279 | 286 | ||||||||
CA_P0003 | Transglutaminase-like predicted protease domain fused to ChW-repeats and cell-adhesion domain | 155.5 | 237.5 | ||||||||
CA_P0004 | Cysteine protease | 16476 | 271 | ||||||||
CA_P0005 | Uncharacterized protein similar to Bacteriocin immunity protein of mesC/lccI/entI family | 162.5 | 229.5 | ||||||||
CA_P0006 | GntR family HTH transcriptional regulator | 1599 | 1544 | ||||||||
CA_P0007 | hypothetical protein | 957.5 | 1054 | ||||||||
CA_P0009 | Response regulator (CheY + HTH domains) | 3064 | 814.5 | ||||||||
CA_P0010 | bgla Beta_glucosidase | 2148.5 | 642.5 | ||||||||
CA_P0012 | pedb Pediocin immunity protein, PedB | 3817.5 | 2461.5 | ||||||||
CA_P0013 | FAD dependent dehydrogenase | 664 | 744.5 | ||||||||
CA_P0014 | Protein tyrosine phosphatase II superfamily protein | 1588 | 1583.5 | ||||||||
CA_P0015 | GLPQ related phosphodiesterase | 3664 | 3275 | ||||||||
CA_P0019 | grkc Spore germination protein, GRKC | 116 | 94 | ||||||||
CA_P0020 | grka Spore germination protein, GRKA | 201 | 85 | ||||||||
CA_P0021 | hypothetical protein | 19 | 32 | ||||||||
CA_P0023 | hypothetical protein | 44 | 49 | ||||||||
CA_P0024 | MarR family HTH transcriptional regulator | 106.5 | 118 | ||||||||
CA_P0025 | pdc Pyruvate decarboxylase | 5205.5 | 5797 | ||||||||
CA_P0026 | hypothetical protein | 5122 | 5912 | ||||||||
CA_P0027 | Predicted amino acid permeases | 206.5 | 114.5 | ||||||||
CA_P0028 | HTH transcriptional regulator TetR family | 468 | 431.5 | ||||||||
CA_P0031 | hlyU Transcriptional activator HLYU, HTH of ArsR family | 406.5 | 375 | ||||||||
CA_P0032 | Rhodanese-like domain | 228.5 | 167.5 | ||||||||
CA_P0033 | hypothetical protein | 399.5 | 297 | ||||||||
CA_P0034 | Rhodanese-like domain | 2499 | 1767.5 | ||||||||
CA_P0035 | adhe Aldehyde-alcohol dehydrogenase, ADHE1 | 814.5 | 2786.5 | ||||||||
CA_P0036 | Uncharacterized, ortholog of YgaT gene of B,subtillis | 3232.5 | 60284.5 | ||||||||
CA_P0037 | Uncharacterized, ortholog of YgaS gene of B,subtillis | 1103.5 | 61929.5 | ||||||||
CA_P0038 | Uncharacterized conserved protein, YCII family | 171.5 | 622 | ||||||||
CA_P0040 | Xre family DNA-binding domain and TPR repeats containing protein | 1605.5 | 255 | ||||||||
CA_P0044 | hypothetical protein | 1393 | 187 | ||||||||
CA_P0045 | Glycosyl transferase | 1757 | 261.5 | ||||||||
CA_P0046 | TetR family HTH transcriptional regulator | 157 | 7 | ||||||||
CA_P0047 | Sulphohydrolase/Glycosulfatase, Zn-dependent hydrolase | 107 | 76.5 | ||||||||
CA_P0048 | Related to methyl-accepting chemotaxis protein | 601 | 1031.5 | ||||||||
CA_P0049 | Permease, MDR related | 211.5 | 152.5 | ||||||||
CA_P0050 | pnba Para-nitrobenzyl esterase, a/b hydrolase | 2205 | 2468 | ||||||||
CA_P0051 | Oxidoreductase | 98.5 | 62.5 | ||||||||
CA_P0052 | MarR family HTH transcriptional regulator | 259.5 | 354 | ||||||||
CA_P0053 | xynb Xylanase, glycosyl hydrolase family 10 | 4608.5 | 241.5 | ||||||||
CA_P0054 | Xylanase/chitin deacetylase family enzyme | 6967 | 350 | ||||||||
CA_P0055 | hypothetical protein | 249 | 196 | ||||||||
CA_P0056 | pell Pectate lyase, secreted, polysaccharide lyase family | 4865 | 396 | ||||||||
CA_P0057 | Putative glycoportein or S-layer protein | 1320.5 | 688 | ||||||||
CA_P0058 | Rare lipoprotein A RLPA releated protein | 8917 | 10583 | ||||||||
CA_P0059 | Alcohol dehydrogenase | 837 | 775.5 | ||||||||
CA_P0062 | Hypothetical protein, CF-18 family | 151 | 123.5 | ||||||||
CA_P0064 | alf Fructose-bisphosphate aldolase class I | 124 | 32.5 | ||||||||
CA_P0065 | Predicted secreted metalloprotease | 4264.5 | 229.5 | ||||||||
CA_P0066 | ptna Mannose-specific phosphotransferase system component IIAB | 38 | 51 | ||||||||
CA_P0067 | manY/levF Mannose/fructose-specific phosphotransferase system component IIC | 69.5 | 159.5 | ||||||||
CA_P0072 | hypothetical protein | 2581 | 5461.5 | ||||||||
CA_P0073 | ABC ATPase containing transporter | 701 | 1729.5 | ||||||||
CA_P0074 | hypothetical protein | 599.5 | 1349 | ||||||||
CA_P0076 | penicillin binding protein 1A | 530.5 | 935.5 | ||||||||
CA_P0078 | thil Acetyl coenzyme A acetyltransferase (thiolase) | 259.5 | 283.5 | ||||||||
CA_P0079 | thlr ThlR, HTH transcriptional regulator TetR/AcrR family | 1417.5 | 1399.5 | ||||||||
CA_P0080 | Site-Specific Recombinase, Xerd | 300 | 254 | ||||||||
CA_P0081 | TnpR resolvase C-terminal fragment | 136 | 109 | ||||||||
CA_P0082 | crp CRP (cyclic AMP receptor protein) regulatory protein | 740.5 | 617.5 | ||||||||
CA_P0083 | SAM-dependent methyltransferase | 708.5 | 1280.5 | ||||||||
CA_P0084 | hypothetical protein | 887.5 | 1064 | ||||||||
CA_P0085 | Hypothetical secreted protein (fragment) | 474.5 | 507 | ||||||||
CA_P0086 | Permease, MDR related, probably tetracycline resistance protein | 605.5 | 584 | ||||||||
CA_P0087 | HTH transcriptional regulator TetR/AcrR family | 2460 | 3028.5 | ||||||||
CA_P0088 | abf 3-oxoacyl-acyl-carrier protein synthase | 1536.5 | 1659.5 | ||||||||
CA_P0089 | Predicted membrane protein | 134 | 123 | ||||||||
CA_P0090 | ABC-type transporter, ATPase component | 167.5 | 214.5 | ||||||||
CA_P0091 | Predicted regulator of stationary/sporulation gene expression | 2159 | 1306 | ||||||||
CA_P0093 | tnpa TnpA, transposase (3' segment) | 385.5 | 425.5 | ||||||||
CA_P0094 | TnpA, transposase (5' segment) | 464.5 | 407.5 | ||||||||
CA_P0096 | ipyr Inorganic pyrophosphatase | 959 | 746 | ||||||||
CA_P0097 | lipg Carboxyl esterase, a/b hydrolase | 2062.5 | 1594 | ||||||||
CA_P0098 | amyA alpha-amylase | 297 | 309 | ||||||||
CA_P0099 | muts DNA mismatch repair protein, MUTS fragment | 211 | 148 | ||||||||
CA_P0100 | HTH transcriptional regulator TetR/AcrR family | 942 | 583 | ||||||||
CA_P0101 | hypothetical protein | 1041.5 | 599.5 | ||||||||
CA_P0102 | Membrane protein | 8135.5 | 733 | ||||||||
CA_P0103 | arsr Transcriptional regulator HTH-type, ArsR family | 587 | 263.5 | ||||||||
CA_P0104 | arsb Heavy metal resistance membrane protein | 468.5 | 269 | ||||||||
CA_P0105 | arsc Arsenate reductase, arsC, protein-tyrosine-phosphatase family enzyme | 463 | 214 | ||||||||
CA_P0106 | dxs 1-deoxyxylulose-5-phosphate synthase, dehydrogenase | 107 | 109 | ||||||||
CA_P0108 | Predicted HTH containing transcriptional regulator | 782.5 | 600 | ||||||||
CA_P0110 | NH2-acetyltransferase | 226 | 274 | ||||||||
CA_P0111 | NH2-acetyltransferase | 52 | 152 | ||||||||
CA_P0112 | hypothetical protein | 11961.5 | 2907 | ||||||||
CA_P0113 | Solo B3/4 domain (OB-fold DNA/RNA-binding) of Phe-aaRS-beta | 3998.5 | 2880.5 | ||||||||
CA_P0114 | Possible beta-xylosidase, family 43 of glycosyl hydrolases | 293.5 | 65 | ||||||||
CA_P0116 | Xylanase, glycosyl hydrolase family 10 | 2110.5 | 306 | ||||||||
CA_P0117 | Possible beta-xylosidase diverged, family 5/39 of glycosyl hydrolases and alpha-amylase C (Greek key) C-terminal domain | 1687 | 154 | ||||||||
CA_P0118 | Possible xylan degradation enzyme (glycosyl hydrolase family 30-like domain and Ricin B-like domain) | 1520 | 203 | ||||||||
CA_P0119 | Possible xylan degradation enzyme (glycosyl hydrolase family 30-like domain and Ricin B-like domain) | 797.5 | 16 | ||||||||
CA_P0120 | Possible xylan degradation enzyme (glycosyl hydrolase family 43-like domain, cellulose-binding domain and Ricin B-like domain) | 1005 | 35 | ||||||||
CA_P0122 | dTDP-4-keto-L-rhamnose reductase | 11 | 20 | ||||||||
CA_P0123 | hypothetical protein | 833 | 555.5 | ||||||||
CA_P0124 | Permease, MDR related, probably tetracycline resistance protein | 2063.5 | 1624 | ||||||||
CA_P0125 | hypothetical protein | 693.5 | 846.5 |
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3. array (low scan) | pH 4.5 / Cy3 | ||||||||
ORF | Name | (F 635 median - B635) - B635 SD | (F 532 median - B532) - B532 SD | pH 5.7 / Cy5 | |||||
CA_P0002 | Transglutaminase-like predicted protease domain fused ChW-repeats and cell-adhesion domain | 106.5 | 14.5 | ||||||
CA_P0003 | Transglutaminase-like predicted protease domain fused to ChW-repeats and cell-adhesion domain | 64 | 10 | ||||||
CA_P0004 | Cysteine protease | 167.5 | 4352 | ||||||
CA_P0005 | Uncharacterized protein similar to Bacteriocin immunity protein of mesC/lccI/entI family | 50 | 62.5 | ||||||
CA_P0006 | GntR family HTH transcriptional regulator | 326.5 | 314 | ||||||
CA_P0007 | hypothetical protein | 523.5 | 311 | ||||||
CA_P0009 | Response regulator (CheY + HTH domains) | 197 | 376 | ||||||
CA_P0010 | bgla Beta_glucosidase | 181 | 522.5 | ||||||
CA_P0012 | pedb Pediocin immunity protein, PedB | 1352.5 | 1527.5 | ||||||
CA_P0013 | FAD dependent dehydrogenase | 232.5 | 107.5 | ||||||
CA_P0014 | Protein tyrosine phosphatase II superfamily protein | 534 | 238.5 | ||||||
CA_P0015 | GLPQ related phosphodiesterase | 725.5 | 1011.5 | ||||||
CA_P0018 | hypothetical protein | 9 | 7 | ||||||
CA_P0019 | grkc Spore germination protein, GRKC | 22.5 | 27.5 | ||||||
CA_P0020 | grka Spore germination protein, GRKA | 52 | 85.5 | ||||||
CA_P0025 | pdc Pyruvate decarboxylase | 1341 | 601.5 | ||||||
CA_P0026 | hypothetical protein | 1107 | 650 | ||||||
CA_P0027 | Predicted amino acid permeases | 20.5 | 54 | ||||||
CA_P0028 | HTH transcriptional regulator TetR family | 130 | 41 | ||||||
CA_P0031 | hlyU Transcriptional activator HLYU, HTH of ArsR family | 107 | 77.5 | ||||||
CA_P0032 | Rhodanese-like domain | 42.5 | 10.5 | ||||||
CA_P0033 | hypothetical protein | 105 | 71 | ||||||
CA_P0034 | Rhodanese-like domain | 519 | 591 | ||||||
CA_P0035 | adhe Aldehyde-alcohol dehydrogenase, ADHE1 | 324 | 81 | ||||||
CA_P0036 | Uncharacterized, ortholog of YgaT gene of B.subtillis | 36982.5 | 101.5 | ||||||
CA_P0037 | Uncharacterized, ortholog of YgaS gene of B.subtillis | 27184.5 | 32 | ||||||
CA_P0038 | Uncharacterized conserved protein, YCII family | 153.5 | 22 | ||||||
CA_P0044 | hypothetical protein | 76.5 | 268.5 | ||||||
CA_P0045 | Glycosyl transferase | 84 | 377 | ||||||
CA_P0046 | TetR family HTH transcriptional regulator | 10 | 25 | ||||||
CA_P0047 | Sulphohydrolase/Glycosulfatase, Zn-dependent hydrolase | 31 | 19 | ||||||
CA_P0048 | Related to methyl-accepting chemotaxis protein | 248 | 125.5 | ||||||
CA_P0049 | Permease, MDR related | 33.5 | 69.5 | ||||||
CA_P0050 | pnba Para-nitrobenzyl esterase, a/b hydrolase | 471 | 327.5 | ||||||
CA_P0051 | Oxidoreductase | 37 | 32.5 | ||||||
CA_P0052 | MarR family HTH transcriptional regulator | 28 | 42 | ||||||
CA_P0053 | xynb Xylanase, glycosyl hydrolase family 10 | 102.5 | 2182 | ||||||
CA_P0054 | Xylanase/chitin deacetylase family enzyme | 150 | 2618.5 | ||||||
CA_P0055 | hypothetical protein | 102 | 218.5 | ||||||
CA_P0056 | pell Pectate lyase, secreted, polysaccharide lyase family | 140 | 904 | ||||||
CA_P0057 | Putative glycoportein or S-layer protein | 554.5 | 373.5 | ||||||
CA_P0058 | Rare lipoprotein A RLPA releated protein | 2633.5 | 1793.5 | ||||||
CA_P0059 | Alcohol dehydrogenase | 181.5 | 176 | ||||||
CA_P0061 | hypothetical protein | 18 | 11 | ||||||
CA_P0062 | Hypothetical protein, CF-18 family | 42 | 7.5 | ||||||
CA_P0065 | Predicted secreted metalloprotease | 112.5 | 1834.5 | ||||||
CA_P0066 | ptna Mannose-specific phosphotransferase system component IIAB | 46 | 6 | ||||||
CA_P0067 | manY/levF Mannose/fructose-specific phosphotransferase system component IIC | 40.5 | 7 | ||||||
CA_P0070 | HAD phosphatase superfamily protein | 5 | 16 | ||||||
CA_P0072 | hypothetical protein | 2495 | 384.5 | ||||||
CA_P0073 | ABC ATPase containing transporter | 1289.5 | 145 | ||||||
CA_P0074 | hypothetical protein | 1090.5 | 105.5 | ||||||
CA_P0076 | penicillin binding protein 1A | 320 | 106 | ||||||
CA_P0077 | Uncharacterized Fe-S protein | 4 | 2 | ||||||
CA_P0078 | thil Acetyl coenzyme A acetyltransferase (thiolase) | 66.5 | 29.5 | ||||||
CA_P0079 | thlr ThlR, HTH transcriptional regulator TetR/AcrR family | 267 | 76.5 | ||||||
CA_P0080 | Site-Specific Recombinase, Xerd | 67 | 52.5 | ||||||
CA_P0082 | crp CRP (cyclic AMP receptor protein) regulatory protein | 122.5 | 188 | ||||||
CA_P0083 | SAM-dependent methyltransferase | 365 | 90.5 | ||||||
CA_P0084 | hypothetical protein | 260 | 168.5 | ||||||
CA_P0085 | Hypothetical secreted protein (fragment) | 138.5 | 105 | ||||||
CA_P0086 | Permease, MDR related, probably tetracycline resistance protein | 296.5 | 203.5 | ||||||
CA_P0087 | HTH transcriptional regulator TetR/AcrR family | 853.5 | 930 | ||||||
CA_P0088 | abf 3-oxoacyl-acyl-carrier protein synthase | 941.5 | 1379.5 | ||||||
CA_P0089 | Predicted membrane protein | 36.5 | 80.5 | ||||||
CA_P0090 | ABC-type transporter, ATPase component | 66 | 128.5 | ||||||
CA_P0091 | Predicted regulator of stationary/sporulation gene expression | 257.5 | 291.5 | ||||||
CA_P0093 | tnpa TnpA, transposase (3' segment) | 98.5 | 66.5 | ||||||
CA_P0094 | TnpA, transposase (5' segment) | 104.5 | 29 | ||||||
CA_P0096 | ipyr Inorganic pyrophosphatase | 204 | 129 | ||||||
CA_P0097 | lipg Carboxyl esterase, a/b hydrolase | 671.5 | 391 | ||||||
CA_P0098 | amyA alpha-amylase | 81 | 36.5 | ||||||
CA_P0099 | muts DNA mismatch repair protein, MUTS fragment | 11 | 11 | ||||||
CA_P0100 | HTH transcriptional regulator TetR/AcrR family | 85 | 189.5 | ||||||
CA_P0101 | hypothetical protein | 58.5 | 158.5 | ||||||
CA_P0102 | Membrane protein | 197.5 | 1702 | ||||||
CA_P0103 | arsr Transcriptional regulator HTH-type, ArsR family | 68.5 | 77.5 | ||||||
CA_P0104 | arsb Heavy metal resistance membrane protein | 72.5 | 117.5 | ||||||
CA_P0105 | arsc Arsenate reductase, arsC, protein-tyrosine-phosphatase family enzyme | 81 | 195 | ||||||
CA_P0106 | dxs 1-deoxyxylulose-5-phosphate synthase, dehydrogenase | 27 | 15 | ||||||
CA_P0107 | HTH transcriptional regulator MerR family | 50 | 36.5 | ||||||
CA_P0108 | Predicted HTH containing transcriptional regulator | 111 | 105.5 | ||||||
CA_P0110 | NH2-acetyltransferase | 52.5 | 66.5 | ||||||
CA_P0111 | NH2-acetyltransferase | 15 | 23.5 | ||||||
CA_P0112 | hypothetical protein | 838.5 | 4584.5 | ||||||
CA_P0113 | Solo B3/4 domain (OB-fold DNA/RNA-binding) of Phe-aaRS-beta | 990.5 | 461.5 | ||||||
CA_P0114 | Possible beta-xylosidase, family 43 of glycosyl hydrolases | 36 | 37.5 | ||||||
CA_P0116 | Xylanase, glycosyl hydrolase family 10 | 59 | 217 | ||||||
CA_P0117 | Possible beta-xylosidase diverged, family 5/39 of glycosyl hydrolases and alpha-amylase C (Greek key) C-terminal domain | 55 | 251.5 | ||||||
CA_P0118 | Possible xylan degradation enzyme (glycosyl hydrolase family 30-like domain and Ricin B-like domain) | 38 | 244 | ||||||
CA_P0119 | Possible xylan degradation enzyme (glycosyl hydrolase family 30-like domain and Ricin B-like domain) | 24.5 | 189.5 | ||||||
CA_P0120 | Possible xylan degradation enzyme (glycosyl hydrolase family 43-like domain, cellulose-binding domain and Ricin B-like domain) | 28 | 211.5 | ||||||
CA_P0121 | Leu-rich protein family protein, YaeG (E.coli) homolog | 1 | 7 | ||||||
CA_P0123 | hypothetical protein | 127.5 | 96 | ||||||
CA_P0124 | Permease, MDR related, probably tetracycline resistance protein | 507 | 909.5 | ||||||
CA_P0125 | hypothetical protein | 223 | 119 | ||||||
CA_P0126 | Uncharacterized protein (NN.term domain homologous to B.subtilis (gi|833839) | 271 | 159 | ||||||
CA_P0127 | HTH transcriptional regulator TetR family | 62 | 29 |
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4. array (low scan) | pH 4.5 / Cy5 | ||||||||
ORF | Name | (F 635 median - B635) - B635 SD | (F 532 median - B532) - B532 SD | pH 5.7 / Cy3 | |||||
CA_P0002 | Transglutaminase-like predicted protease domain fused ChW-repeats and cell-adhesion domain | 16.5 | 45 | ||||||
CA_P0003 | Transglutaminase-like predicted protease domain fused to ChW-repeats and cell-adhesion domain | 8.5 | 28.5 | ||||||
CA_P0004 | Cysteine protease | 3907 | 131.5 | ||||||
CA_P0005 | Uncharacterized protein similar to Bacteriocin immunity protein of mesC/lccI/entI family | 102 | 33 | ||||||
CA_P0006 | GntR family HTH transcriptional regulator | 269.5 | 312 | ||||||
CA_P0007 | hypothetical protein | 159.5 | 180 | ||||||
CA_P0009 | Response regulator (CheY + HTH domains) | 596 | 133.5 | ||||||
CA_P0010 | bgla Beta_glucosidase | 508.5 | 160 | ||||||
CA_P0012 | pedb Pediocin immunity protein, PedB | 2200 | 842 | ||||||
CA_P0013 | FAD dependent dehydrogenase | 190.5 | 138 | ||||||
CA_P0014 | Protein tyrosine phosphatase II superfamily protein | 389.5 | 371.5 | ||||||
CA_P0015 | GLPQ related phosphodiesterase | 1249.5 | 475.5 | ||||||
CA_P0017 | grkb1 Spore germination protein, GRKB | 10 | 3 | ||||||
CA_P0019 | grkc Spore germination protein, GRKC | 43.5 | 12 | ||||||
CA_P0020 | grka Spore germination protein, GRKA | 88 | 31.5 | ||||||
CA_P0021 | hypothetical protein | 13 | 7 | ||||||
CA_P0023 | hypothetical protein | 3 | 12 | ||||||
CA_P0025 | pdc Pyruvate decarboxylase | 788.5 | 1078.5 | ||||||
CA_P0026 | hypothetical protein | 602 | 485 | ||||||
CA_P0027 | Predicted amino acid permeases | 61 | 28.5 | ||||||
CA_P0028 | HTH transcriptional regulator TetR family | 83 | 92 | ||||||
CA_P0031 | hlyU Transcriptional activator HLYU, HTH of ArsR family | 80.5 | 69 | ||||||
CA_P0032 | Rhodanese-like domain | 21 | 17 | ||||||
CA_P0033 | hypothetical protein | 87.5 | 59 | ||||||
CA_P0034 | Rhodanese-like domain | 636 | 396.5 | ||||||
CA_P0035 | adhe Aldehyde-alcohol dehydrogenase, ADHE1 | 87 | 243 | ||||||
CA_P0036 | Uncharacterized, ortholog of YgaT gene of B.subtillis | 258 | 54827.5 | ||||||
CA_P0037 | Uncharacterized, ortholog of YgaS gene of B.subtillis | 76 | 28223 | ||||||
CA_P0038 | Uncharacterized conserved protein, YCII family | 30.5 | 108.5 | ||||||
CA_P0040 | Xre family DNA-binding domain and TPR repeats containing protein | 233 | 48 | ||||||
CA_P0044 | hypothetical protein | 290 | 37.5 | ||||||
CA_P0045 | Glycosyl transferase | 329 | 25 | ||||||
CA_P0046 | TetR family HTH transcriptional regulator | 12 | 7 | ||||||
CA_P0047 | Sulphohydrolase/Glycosulfatase, Zn-dependent hydrolase | 29 | 18 | ||||||
CA_P0048 | Related to methyl-accepting chemotaxis protein | 124.5 | 173.5 | ||||||
CA_P0049 | Permease, MDR related | 120.5 | 25.5 | ||||||
CA_P0050 | pnba Para-nitrobenzyl esterase, a/b hydrolase | 338 | 427.5 | ||||||
CA_P0051 | Oxidoreductase | 38.5 | 21.5 | ||||||
CA_P0052 | MarR family HTH transcriptional regulator | 58 | 24 | ||||||
CA_P0053 | xynb Xylanase, glycosyl hydrolase family 10 | 1977.5 | 82.5 | ||||||
CA_P0054 | Xylanase/chitin deacetylase family enzyme | 3082.5 | 98 | ||||||
CA_P0055 | hypothetical protein | 221.5 | 75.5 | ||||||
CA_P0056 | pell Pectate lyase, secreted, polysaccharide lyase family | 1006 | 88.5 | ||||||
CA_P0057 | Putative glycoportein or S-layer protein | 455 | 399.5 | ||||||
CA_P0058 | Rare lipoprotein A RLPA releated protein | 1842 | 2759.5 | ||||||
CA_P0059 | Alcohol dehydrogenase | 146 | 155.5 | ||||||
CA_P0061 | hypothetical protein | 1 | 10 | ||||||
CA_P0062 | Hypothetical protein, CF-18 family | 12.5 | 22 | ||||||
CA_P0064 | alf Fructose-bisphosphate aldolase class I | 6.5 | 7 | ||||||
CA_P0065 | Predicted secreted metalloprotease | 1836 | 93 | ||||||
CA_P0066 | ptna Mannose-specific phosphotransferase system component IIAB | 2 | 21 | ||||||
CA_P0067 | manY/levF Mannose/fructose-specific phosphotransferase system component IIC | 3 | 30 | ||||||
CA_P0072 | hypothetical protein | 584 | 1204 | ||||||
CA_P0073 | ABC ATPase containing transporter | 153.5 | 339.5 | ||||||
CA_P0074 | hypothetical protein | 154.5 | 348.5 | ||||||
CA_P0076 | penicillin binding protein 1A | 119.5 | 179.5 | ||||||
CA_P0077 | Uncharacterized Fe-S protein | 3.5 | 8.5 | ||||||
CA_P0078 | thil Acetyl coenzyme A acetyltransferase (thiolase) | 31 | 76.5 | ||||||
CA_P0079 | thlr ThlR, HTH transcriptional regulator TetR/AcrR family | 122.5 | 172.5 | ||||||
CA_P0080 | Site-Specific Recombinase, Xerd | 51 | 42 | ||||||
CA_P0081 | TnpR resolvase C-terminal fragment | 22 | 24 | ||||||
CA_P0082 | crp CRP (cyclic AMP receptor protein) regulatory protein | 249 | 92 | ||||||
CA_P0083 | SAM-dependent methyltransferase | 117.5 | 286 | ||||||
CA_P0084 | hypothetical protein | 210 | 219.5 | ||||||
CA_P0085 | Hypothetical secreted protein (fragment) | 120.5 | 101.5 | ||||||
CA_P0086 | Permease, MDR related, probably tetracycline resistance protein | 223 | 257 | ||||||
CA_P0087 | HTH transcriptional regulator TetR/AcrR family | 1078.5 | 746.5 | ||||||
CA_P0088 | abf 3-oxoacyl-acyl-carrier protein synthase | 1604 | 935.5 | ||||||
CA_P0089 | Predicted membrane protein | 110 | 40 | ||||||
CA_P0090 | ABC-type transporter, ATPase component | 133 | 72 | ||||||
CA_P0091 | Predicted regulator of stationary/sporulation gene expression | 554 | 199 | ||||||
CA_P0093 | tnpa TnpA, transposase (3' segment) | 54 | 75 | ||||||
CA_P0094 | TnpA, transposase (5' segment) | 27 | 56 | ||||||
CA_P0096 | ipyr Inorganic pyrophosphatase | 155 | 138.5 | ||||||
CA_P0097 | lipg Carboxyl esterase, a/b hydrolase | 462.5 | 400 | ||||||
CA_P0098 | amyA alpha-amylase | 47 | 48.5 | ||||||
CA_P0099 | muts DNA mismatch repair protein, MUTS fragment | 24.5 | 4 | ||||||
CA_P0100 | HTH transcriptional regulator TetR/AcrR family | 163.5 | 75 | ||||||
CA_P0101 | hypothetical protein | 205 | 73.5 | ||||||
CA_P0102 | Membrane protein | 1998 | 154 | ||||||
CA_P0103 | arsr Transcriptional regulator HTH-type, ArsR family | 141 | 36 | ||||||
CA_P0104 | arsb Heavy metal resistance membrane protein | 141 | 44 | ||||||
CA_P0105 | arsc Arsenate reductase, arsC, protein-tyrosine-phosphatase family enzyme | 141 | 54 | ||||||
CA_P0106 | dxs 1-deoxyxylulose-5-phosphate synthase, dehydrogenase | 18.5 | 28 | ||||||
CA_P0107 | HTH transcriptional regulator MerR family | 51.5 | 38 | ||||||
CA_P0108 | Predicted HTH containing transcriptional regulator | 114.5 | 76 | ||||||
CA_P0110 | NH2-acetyltransferase | 56 | 42 | ||||||
CA_P0112 | hypothetical protein | 4686.5 | 784.5 | ||||||
CA_P0113 | Solo B3/4 domain (OB-fold DNA/RNA-binding) of Phe-aaRS-beta | 658 | 591.5 | ||||||
CA_P0114 | Possible beta-xylosidase, family 43 of glycosyl hydrolases | 19 | 16 | ||||||
CA_P0115 | xynD Endo-1,4-beta-xylanase XynD B.subtilis ortholog (family 43 glycosyl hydrolase and cellulose-binding domain) | 9 | 4 | ||||||
CA_P0116 | Xylanase, glycosyl hydrolase family 10 | 224.5 | 53 | ||||||
CA_P0117 | Possible beta-xylosidase diverged, family 5/39 of glycosyl hydrolases and alpha-amylase C (Greek key) C-terminal domain | 339.5 | 45 | ||||||
CA_P0118 | Possible xylan degradation enzyme (glycosyl hydrolase family 30-like domain and Ricin B-like domain) | 262.5 | 27.5 | ||||||
CA_P0119 | Possible xylan degradation enzyme (glycosyl hydrolase family 30-like domain and Ricin B-like domain) | 224 | 17 | ||||||
CA_P0120 | Possible xylan degradation enzyme (glycosyl hydrolase family 43-like domain, cellulose-binding domain and Ricin B-like domain) | 199.5 | 15 | ||||||
CA_P0123 | hypothetical protein | 102 | 79.5 | ||||||
CA_P0124 | Permease, MDR related, probably tetracycline resistance protein | 1062.5 | 421 |