Selected Cell
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Read me_data
Transcriptome_data
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1. Array
2. Array
3. Array
4. Array
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Description: | This data-sheet reflects the transcriptome of C. acetobutylicum concerning the comparison of acidogenesis to solventogenesis. Genes with average fold regulation > 1.0 (significant > 3.0) showed elevated transcript level in the acidogenesis (pH 5.7) or repressed transcript level in the solventogenesis (pH 4.5), respectively. Genes were figured out as significant induced, if the average fold regulation was > 3.0 and at least three out of four micro arrays were > 2.0.Furthermore, genes with fold regulation < 1.0 (significant < 0.33) showed elevated transcript level in the solventogenesis (pH 4.5) or repressed transcript level in the acidogenesis (pH 5.7), respectively. Genes were figured out as significant induced, if the average fold regulation was < 0.33 and at least three out of four micro arrays were < 0.5. | ||||||||
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ORF | Name | Array 1 | Array 2 | Array 3 | Array 4 | Average | Standard deviation | ||
CA_P0002 | Transglutaminase-like predicted protease domain fused ChW-repeats and cell-adhesion domain | 1.137 | 1.0828370330265296 | 2.4875 | 1.662510390689942 | 1.592461855929118 | 0.6514504429575791 | ||
CA_P0003 | Transglutaminase-like predicted protease domain fused to ChW-repeats and cell-adhesion domain | 1.5430000000000001 | 1.4598540145985401 | 1.5985 | 1.547987616099071 | 1.5373354076744028 | 0.05741669553324797 | ||
CA_P0004 | Cysteine protease | 0.022 | 0.0196645232336342 | 0.0415 | 0.036404011722091775 | 0.029892133738931494 | 0.010708826664698436 | ||
CA_P0005 | Uncharacterized protein similar to Bacteriocin immunity protein of mesC/lccI/entI family | 1.7045 | 1.4357501794687724 | 0.6385000000000001 | 0.39401103230890466 | 1.0431903029444192 | 0.6262698403501651 | ||
CA_P0006 | GntR family HTH transcriptional regulator | 0.9925 | 0.9925558312655086 | 0.9864999999999999 | 1.1389521640091116 | 1.027626998818655 | 0.0742711592209243 | ||
CA_P0007 | hypothetical protein | 1.155 | 1.106194690265487 | 1.58 | 1.0834236186348862 | 1.2311545772250934 | 0.23447249881260057 | ||
CA_P0009 | Response regulator (CheY + HTH domains) | 0.2465 | 0.2800336040324839 | 0.5075 | 0.23975065931431316 | 0.3184460658366993 | 0.1272610317963096 | ||
CA_P0010 | bgla Beta_glucosidase | 0.2975 | 0.32010243277848915 | 0.34650000000000003 | 0.3337226764558652 | 0.3244562773085886 | 0.020955418645163666 | ||
CA_P0012 | pedb Pediocin immunity protein, PedB | 0.763 | 0.6472491909385114 | 0.8755 | 0.3861749372465727 | 0.667981032046271 | 0.20971187427320875 | ||
CA_P0013 | FAD dependent dehydrogenase | 1.5255 | 1.17096018735363 | 1.764 | 0.7215007215007215 | 1.2954902272135878 | 0.4536436142574396 | ||
CA_P0014 | Protein tyrosine phosphatase II superfamily protein | 1.2175 | 1.0065425264217414 | 1.9925 | 0.9438414346389807 | 1.2900959902651805 | 0.4826787595781291 | ||
CA_P0015 | GLPQ related phosphodiesterase | 0.971 | 0.9103322712790168 | 0.7044999999999999 | 0.3896356906292616 | 0.7438669904770696 | 0.26225284711419483 | ||
CA_P0018 | hypothetical protein | 0.739 | 0.8779631255487269 | 0.508 | 0.7083210418495757 | 0.1868798475527586 | |||
CA_P0019 | grkc Spore germination protein, GRKC | 0.7225 | 0.9025270758122743 | 0.5569999999999999 | 0.5060728744939271 | 0.6720249875765504 | 0.1793040166530483 | ||
CA_P0020 | grka Spore germination protein, GRKA | 0.6765 | 0.7037297677691766 | 0.531 | 0.48250904704463216 | 0.5984347037034522 | 0.10827039936785426 | ||
CA_P0025 | pdc Pyruvate decarboxylase | 1.137 | 1.1173184357541899 | 2.144 | 1.358695652173913 | 1.4392535219820257 | 0.48240942499147804 | ||
CA_P0026 | hypothetical protein | 1.0845 | 1.1554015020219528 | 1.6505 | 1.3245033112582782 | 1.3037262033200578 | 0.25215345824543517 | ||
CA_P0027 | Predicted amino acid permeases | 0.877 | 0.7840062720501764 | 0.353 | 0.556947925368978 | 0.6427385493547886 | 0.2353320029802095 | ||
CA_P0028 | HTH transcriptional regulator TetR family | 1.2015 | 0.921234454168586 | 1.819 | 1.1061946902654867 | 1.2619822861085181 | 0.3891468019964196 | ||
CA_P0031 | hlyU Transcriptional activator HLYU, HTH of ArsR family | 1.1125 | 0.9960159362549801 | 1.0485 | 0.8616975441619993 | 1.0046783701042448 | 0.1065588936807836 | ||
CA_P0032 | Rhodanese-like domain | 0.9239999999999999 | 0.8417508417508418 | 1.278 | 0.8361204013377926 | 0.9699678107721585 | 0.20924593933533983 | ||
CA_P0033 | hypothetical protein | 0.8845000000000001 | 0.8186655751125665 | 1.119 | 0.721240533717995 | 0.8858515272076404 | 0.16928355731116965 | ||
CA_P0034 | Rhodanese-like domain | 0.835 | 0.7140307033202428 | 0.8405 | 0.6273525721455459 | 0.7542208188664471 | 0.10276213734532307 | ||
CA_P0035 | adhe Aldehyde-alcohol dehydrogenase, ADHE1 | 2.8995 | 3.3783783783783785 | 2.9415 | 2.306805074971165 | 2.8815458633373856 | 0.44010846062459397 | ||
CA_P0036 | Uncharacterized, ortholog of YgaT gene of B,subtillis | 90.372 | 19.047619047619047 | 269.9845 | 200 | 144.85102976190478 | 111.7948375720697 | ||
CA_P0037 | Uncharacterized, ortholog of YgaS gene of B,subtillis | 114.935 | 54.054054054054056 | 451.8835 | 250 | 217.7181385135135 | 176.28182096269487 | ||
CA_P0038 | Uncharacterized conserved protein, YCII family | 4.164 | 3.361344537815126 | 3.1865 | 2.5380710659898478 | 3.312478900951244 | 0.6690924726637282 | ||
CA_P0040 | Xre family DNA-binding domain and TPR repeats containing protein | 0.2145 | 0.1866019779809666 | 0.25549310168625444 | 0.21886502655574036 | 0.034652371116109144 | |||
CA_P0044 | hypothetical protein | 0.1835 | 0.16975046681378375 | 0.2865 | 0.18589088205223533 | 0.20641033721650476 | 0.05386474349185711 | ||
CA_P0045 | Glycosyl transferase | 0.1895 | 0.1760098565519669 | 0.226 | 0.14084507042253522 | 0.18308873174362553 | 0.03519999384382431 | ||
CA_P0046 | TetR family HTH transcriptional regulator | 0.467 | 0.4428697962798937 | 0.364 | 0.6353240152477764 | 0.4772984528819175 | 0.11416363740068204 | ||
CA_P0047 | Sulphohydrolase/Glycosulfatase, Zn-dependent hydrolase | 0.87 | 0.9170105456212746 | 0.7625 | 0.6966213862765587 | 0.8115329829744583 | 0.10025437110472638 | ||
CA_P0048 | Related to methyl-accepting chemotaxis protein | 1.509 | 1.6949152542372883 | 1.675 | 1.3793103448275863 | 1.5645563997662186 | 0.14898974707108825 | ||
CA_P0049 | Permease, MDR related | 0.816 | 0.9128251939753538 | 0.4305 | 0.3269042170644001 | 0.6215573527599384 | 0.2863379593015107 | ||
CA_P0050 | pnba Para-nitrobenzyl esterase, a/b hydrolase | 0.98 | 1.1217049915872126 | 1.3225 | 1.2399256044637321 | 1.1660326490127362 | 0.14890185638174003 | ||
CA_P0052 | MarR family HTH transcriptional regulator | 1.439 | 1.4275517487508922 | 0.4505 | 0.49443757725587145 | 0.9528723315016909 | 0.5550318437106448 | ||
CA_P0053 | xynb Xylanase, glycosyl hydrolase family 10 | 0.059 | 0.06588917440864465 | 0.051000000000000004 | 0.04826021910139472 | 0.056037348377509844 | 0.00799363078202049 | ||
CA_P0054 | Xylanase/chitin deacetylase family enzyme | 0.0595 | 0.05707436790137549 | 0.061 | 0.036093264996751605 | 0.053416908224531774 | 0.011661802496399558 | ||
CA_P0055 | hypothetical protein | 1.02 | 0.9259259259259258 | 0.503 | 0.37814331631688414 | 0.7067673105607024 | 0.31393208547289375 | ||
CA_P0056 | pell Pectate lyase, secreted, polysaccharide lyase family | 0.101 | 0.09124920156948627 | 0.159 | 0.11145165784341042 | 0.11567521485322417 | 0.03003812853555221 | ||
CA_P0057 | Putative glycoportein or S-layer protein | 0.6134999999999999 | 0.5497526113249038 | 1.396 | 0.8726003490401397 | 0.8579632400912608 | 0.3849042597027415 | ||
CA_P0058 | Rare lipoprotein A RLPA releated protein | 1.2525 | 1.187648456057007 | 1.455 | 1.4936519790888723 | 1.3472001087864698 | 0.1499931191239491 | ||
CA_P0059 | Alcohol dehydrogenase | 1.0234999999999999 | 0.8583690987124464 | 0.9135 | 1.0060362173038229 | 0.9503513290040673 | 0.07803906285148514 | ||
CA_P0062 | Hypothetical protein, CF-18 family | 1.08 | 0.9657170449058428 | 1.2865000000000002 | 1.4492753623188408 | 1.195373101806171 | 0.2151149510992163 | ||
CA_P0064 | alf Fructose-bisphosphate aldolase class I | 0.755 | 0.54421768707483 | 0.7993605115907275 | 0.6995260662218525 | 0.13631758221925774 | |||
CA_P0065 | Predicted secreted metalloprotease | 0.0665 | 0.06532745386248572 | 0.067 | 0.05780848050408996 | 0.06415898359164393 | 0.004291306883130686 | ||
CA_P0066 | ptna Mannose-specific phosphotransferase system component IIAB | 1.6455 | 1.773049645390071 | 1.8195000000000001 | 1.6920473773265652 | 1.732524255679159 | 0.07835535733454028 | ||
CA_P0067 | manY/levF Mannose/fructose-specific phosphotransferase system component IIC | 1.48 | 1.7889087656529519 | 1.4769999999999999 | 2.066115702479339 | 1.7030061170330728 | 0.2828652973020924 | ||
CA_P0072 | hypothetical protein | 1.9565000000000001 | 2.109704641350211 | 6.0375 | 2.0242914979757085 | 3.03199903483148 | 2.004647571156857 | ||
CA_P0073 | ABC ATPase containing transporter | 2.657 | 2.398081534772182 | 7.5625 | 2.1052631578947367 | 3.6807111731667295 | 2.597655628979498 | ||
CA_P0074 | hypothetical protein | 2.937 | 2.2050716648291067 | 8.293500000000002 | 2.0120724346076457 | 3.8619110248591886 | 2.9811329347204207 | ||
CA_P0076 | penicillin binding protein 1A | 1.4595 | 1.3783597518952446 | 2.3195 | 1.402524544179523 | 1.639971074018692 | 0.454294584382796 | ||
CA_P0079 | thlr ThlR, HTH transcriptional regulator TetR/AcrR family | 1.09 | 0.9900990099009901 | 2.6255 | 1.3280212483399734 | 1.5084050645602407 | 0.7580992415872404 | ||
CA_P0080 | Site-Specific Recombinase, Xerd | 0.8565 | 0.9237875288683602 | 0.9375 | 0.8554319931565441 | 0.893304880506226 | 0.043479325598566904 | ||
CA_P0081 | TnpR resolvase C-terminal fragment | 1.097 | 0.9803921568627451 | 0.8818342151675486 | 0.9864087906767646 | 0.10770899986760639 | |||
CA_P0082 | crp CRP (cyclic AMP receptor protein) regulatory protein | 0.9535 | 0.856898029134533 | 0.6065 | 0.39992001599680066 | 0.7042045112828333 | 0.25006584245297725 | ||
CA_P0083 | SAM-dependent methyltransferase | 2.0105 | 1.8034265103697025 | 3.0140000000000002 | 2.157497303128371 | 2.2463559533745183 | 0.5319736097044261 | ||
CA_P0084 | hypothetical protein | 1.229 | 1.2172854534388313 | 1.3385 | 0.9794319294809012 | 1.1910543457299332 | 0.15127481803197904 | ||
CA_P0085 | Hypothetical secreted protein (fragment) | 1.1804999999999999 | 1.0834236186348862 | 1.1355 | 0.8572653236176596 | 1.0641722355631364 | 0.14352802829578543 | ||
CA_P0086 | Permease, MDR related, probably tetracycline resistance protein | 0.9225 | 0.9930486593843098 | 1.332 | 1.124859392575928 | 1.0931020129900595 | 0.1799967590074701 | ||
CA_P0087 | HTH transcriptional regulator TetR/AcrR family | 1.54 | 1.2944983818770228 | 0.897 | 0.6918021445866482 | 1.1058251316159178 | 0.3825913316161554 | ||
CA_P0088 | abf 3-oxoacyl-acyl-carrier protein synthase | 0.9844999999999999 | 1.0775862068965518 | 0.667 | 0.5885815185403179 | 0.8294169313592175 | 0.23806140885603527 | ||
CA_P0089 | Predicted membrane protein | 1.0375 | 1.0389610389610389 | 0.4125 | 0.42589437819420783 | 0.7287138542888117 | 0.35744138732879893 | ||
CA_P0090 | ABC-type transporter, ATPase component | 1.1405 | 1.1820330969267139 | 0.46399999999999997 | 0.5374899220639613 | 0.8310057547476688 | 0.38290627698150487 | ||
CA_P0091 | Predicted regulator of stationary/sporulation gene expression | 0.7835000000000001 | 0.6281407035175879 | 0.8320000000000001 | 0.3787161522438932 | 0.6555892139403704 | 0.20403761715770213 | ||
CA_P0093 | tnpa TnpA, transposase (3' segment) | 0.8705 | 1.1092623405435387 | 1.1055000000000001 | 1.1494252873563218 | 1.0586719069749653 | 0.12701326031856566 | ||
CA_P0094 | TnpA, transposase (5' segment) | 1.0154999999999998 | 0.924214417744917 | 1.7719999999999998 | 1.4064697609001406 | 1.2795460446612643 | 0.38927342860810543 | ||
CA_P0096 | ipyr Inorganic pyrophosphatase | 0.782 | 0.8240626287597858 | 1.361 | 0.8695652173913044 | 0.9591569615377726 | 0.2702712069692132 | ||
CA_P0097 | lipg Carboxyl esterase, a/b hydrolase | 0.8345 | 0.7821666014861164 | 1.664 | 0.8517887563884157 | 1.033113839468633 | 0.4216310024905598 | ||
CA_P0098 | amyA alpha-amylase | 0.885 | 1.0822510822510822 | 1.385 | 1 | 1.0880627705627706 | 0.21384966237578326 | ||
CA_P0099 | muts DNA mismatch repair protein, MUTS fragment | 0.9844999999999999 | 0.84530853761623 | 0.467 | 0.4065040650406504 | 0.6758281506642201 | 0.2829290675184528 | ||
CA_P0100 | HTH transcriptional regulator TetR/AcrR family | 0.7195 | 0.6583278472679394 | 0.4235 | 0.4921259842519685 | 0.5733634578799769 | 0.13860425623103106 | ||
CA_P0101 | hypothetical protein | 0.6639999999999999 | 0.6209251785159888 | 0.411 | 0.4094165813715456 | 0.5263354399718836 | 0.13524179942543763 | ||
CA_P0102 | Membrane protein | 0.1095 | 0.09655771737556124 | 0.1225 | 0.08394191219675984 | 0.10312490739308026 | 0.01660473134081345 | ||
CA_P0103 | arsr Transcriptional regulator HTH-type, ArsR family | 0.733 | 0.5107252298263534 | 0.711 | 0.3293265272517701 | 0.5710129392695309 | 0.18963395852710238 | ||
CA_P0104 | arsb Heavy metal resistance membrane protein | 0.601 | 0.6489292667099287 | 0.6025 | 0.36737692872887584 | 0.5549515488597011 | 0.12701360114547103 | ||
CA_P0105 | arsc Arsenate reductase, arsC, protein-tyrosine-phosphatase family enzyme | 0.4445 | 0.5457025920873124 | 0.398 | 0.44964028776978415 | 0.4594607199642742 | 0.06200899030557114 | ||
CA_P0108 | Predicted HTH containing transcriptional regulator | 1.0405 | 0.8126777732629011 | 0.9059999999999999 | 0.7320644216691068 | 0.872810548733002 | 0.1324722797554954 | ||
CA_P0110 | NH2-acetyltransferase | 1.29 | 1.4074595355383532 | 0.654 | 0.8028904054596547 | 1.038587485249502 | 0.3663948185994026 | ||
CA_P0111 | NH2-acetyltransferase | 1.363 | 1.8281535648994514 | 0.469 | 1.220051188299817 | 0.6907607221893789 | |||
CA_P0112 | hypothetical protein | 0.267 | 0.24663953631767171 | 0.184 | 0.1697648756472286 | 0.2168511029912251 | 0.04725311419885985 | ||
CA_P0113 | Solo B3/4 domain (OB-fold DNA/RNA-binding) of Phe-aaRS-beta | 1.0339999999999998 | 0.7246376811594204 | 2.043 | 0.891662951404369 | 1.1733251581409474 | 0.5934082015378999 | ||
CA_P0114 | Possible beta-xylosidase, family 43 of glycosyl hydrolases | 0.355 | 0.36094567767550984 | 0.6619999999999999 | 0.7215007215007215 | 0.5248615997940578 | 0.19424664527792485 | ||
CA_P0116 | Xylanase, glycosyl hydrolase family 10 | 0.165 | 0.1679684219366759 | 0.279 | 0.2787456445993031 | 0.22267851663399474 | 0.06489899349428342 | ||
CA_P0117 | Possible beta-xylosidase diverged, family 5/39 of glycosyl hydrolases and alpha-amylase C (Greek key) C-terminal domain | 0.1245 | 0.12394645513138325 | 0.2225 | 0.19303156066016794 | 0.16599450394788778 | 0.049711520418359016 | ||
CA_P0118 | Possible xylan degradation enzyme (glycosyl hydrolase family 30-like domain and Ricin B-like domain) | 0.1395 | 0.16242995208316416 | 0.1785 | 0.1580403002765705 | 0.1596175630899337 | 0.016038080290065253 | ||
CA_P0119 | Possible xylan degradation enzyme (glycosyl hydrolase family 30-like domain and Ricin B-like domain) | 0.0925 | 0.0898069151324652 | 0.1515 | 0.12122681537156019 | 0.11375843262600635 | 0.028900973435956795 | ||
CA_P0120 | Possible xylan degradation enzyme (glycosyl hydrolase family 43-like domain, cellulose-binding domain and Ricin B-like domain) | 0.094 | 0.10471752447772134 | 0.1555 | 0.12634238787113078 | 0.12013997808721304 | 0.027141306567280508 | ||
CA_P0121 | Leu-rich protein family protein, YaeG (E,coli) homolog | 0.34 | 0.4024144869215292 | 0.287 | 0.34313816230717636 | 0.057771203854858476 | |||
CA_P0123 | hypothetical protein | 0.7295 | 0.723589001447178 | 1.0745 | 0.7864726700747149 | 0.8285154178804732 | 0.16642276800081074 | ||
CA_P0124 | Permease, MDR related, probably tetracycline resistance protein | 0.9065000000000001 | 0.8012820512820513 | 0.5505 | 0.4025764895330113 | 0.6652146352037657 | 0.23012403327653436 | ||
CA_P0125 | hypothetical protein | 1.3725 | 1.2077294685990336 | 1.5325 | 1.5600624024960998 | 1.4181979677737833 | 0.16286575843687204 | ||
CA_P0126 | Uncharacterized protein (NN,term domain homologous to B,subtilis (gi|833839) | 1.2885 | 1.2070006035003018 | 1.4875 | 1.5936254980079683 | 1.3941565253770676 | 0.1776621472959332 | ||
CA_P0127 | HTH transcriptional regulator TetR family | 1.5485 | 1.2539184952978057 | 1.226 | 1.1820330969267139 | 1.3026128980561298 | 0.1665739438921093 | ||
CA_P0128 | Permease, MDR related | 0.295 | 0.2476166893648632 | 0.049 | 0.04119125097829221 | 0.15820198508578887 | 0.1320672450797133 | ||
CA_P0129 | Glycogen-binding regulatory subunit of S/T protein phosphatase I | 0.194 | 0.20986358866736624 | 0.2235 | 0.24786218862312556 | 0.21880644432262297 | 0.02281520026177667 | ||
CA_P0131 | Permease, MDR related | 1.238 | 1.2135922330097089 | 0.33799999999999997 | 0.5986231667165519 | 0.8470538499315653 | 0.4502010310278794 | ||
CA_P0132 | hypothetical protein | 1.097 | 1.6406890894175552 | 0.6105006105006106 | 1.1160632333060552 | 0.5153587397836222 | |||
CA_P0133 | Antibiotic-resistance protein, alpha/beta superfamily hydrolase | 0.7195 | 0.7132667617689015 | 1.0375 | 1.1655011655011656 | 0.9089419818175168 | 0.22841981451372254 |
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Description: | The single sheets contain the transcript amount of the genes for all four microarrays (sheet 1 to 4). The first biological experiment will be represented by the 1. and 2. array. The 3. and 4. array showed the transcript level of the second biological experiment. The 1. and 3. array the cDNA of pH 4.5 was labeled by Cy3 and pH 5.7 by Cy5, respectively. The 2. and 4. array contained the transcript level of the dyeflip (pH 4.5 Cy5 / pH 5.7 Cy3). Furthermore, the 1. and 2. array were evaluated under high scanning conditions and the 3. and 4. array under low scanning conditions. | ||||||||
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CAC0990 | gltX Glutamyl-tRNA synthetase | 5087.5 | 5250.5 | ||||||
CAC0991 | Putative intracellular protease | 214 | 434.5 | ||||||
CAC0992 | hypothetical protein | 133.5 | 205.5 | ||||||
CAC0993 | dacF D-alanyl-D-alanine carboxypeptidase (penicilin binding protein) | 551 | 679.5 | ||||||
CAC0994 | Predicted membrane protein | 734 | 1134.5 | ||||||
CAC0995 | Predicted membrane protein | 468 | 455 | ||||||
CAC0996 | hypothetical protein | 831 | 686 | ||||||
CAC0997 | ndk Probable nucleoside-diphosphate kinase N-terminal domain | 502.5 | 355.5 | ||||||
CAC0998 | Homoserine dehydrogenase | 5221.5 | 4022 | ||||||
CAC0999 | thrC threonine synthase | 4739 | 4444.5 | ||||||
CAC1000 | Uncharacterized protein, homolog of yhfF B,subtilis | 1881 | 2025 | ||||||
CAC1001 | aspartate aminotransferase | 404 | 682 | ||||||
CAC1002 | nicotinate phosphoribosyltransferase | 835 | 1231.5 | ||||||
CAC1004 | Predicted membrane protein | 289 | 281.5 | ||||||
CAC1005 | Uncharacterized protein similar to Cylindrotheca fusiformis plasmid hypothetical protein (GI 99319) | 177 | 123.5 | ||||||
CAC1006 | MutT-like (Nudix) hydrolase | 769.5 | 598 | ||||||
CAC1007 | Predicted acetyltransferase | 202 | 141 | ||||||
CAC1010 | Predicted phosphohydrolase, Icc family | 2364 | 2081.5 | ||||||
CAC1013 | FTSA related protein, predicted ATPase of the HSP70 family | 810 | 368 | ||||||
CAC1014 | IAA-like amino acid hydrolase | 2032 | 835.5 | ||||||
CAC1015 | Pseudouridylate synthase | 1471.5 | 1019.5 | ||||||
CAC1016 | SpoVB related membrane protein | 626.5 | 363.5 | ||||||
CAC1018 | Predicted membrane protein | 499 | 689.5 | ||||||
CAC1019 | Phospholipase C related protein | 175 | 172.5 | ||||||
CAC1020 | hypothetical protein | 54 | 22 | ||||||
CAC1021 | Predicted Fe-S oxidoreductase | 598.5 | 461.5 | ||||||
CAC1022 | Thioesterase II of alpha/beta hydrolase superfamily | 213.5 | 195 | ||||||
CAC1023 | nadC Nicotinate-nucleotide pyrophosphorylase | 3946.5 | 3992 | ||||||
CAC1024 | nadB L-aspartate oxidase | 3416 | 3048.5 | ||||||
CAC1025 | nadA quinolinate synthetase | 2511 | 2385 | ||||||
CAC1026 | Superfamily I DNA helicase | 475.5 | 417.5 | ||||||
CAC1027 | Flavoprotein | 18141 | 26785 | ||||||
CAC1028 | Hydrolase of alpha/beta superfamily, possible membrane associated lipase | 200.5 | 80.5 | ||||||
CAC1029 | FeoA-like protein, involved in iron transport | 2441 | 5736 | ||||||
CAC1030 | FeoA-like protein, involved in iron transport | 2324 | 5599.5 | ||||||
CAC1031 | feoB FeoB-like GTPase, responsible for iron uptake | 752.5 | 2133 | ||||||
CAC1032 | Predicted transcriptional regulator | 271.5 | 760.5 | ||||||
CAC1033 | Hypothetical protein, CF-31 family | 1201.5 | 1159.5 | ||||||
CAC1034 | hypothetical protein | 2662 | 2469.5 | ||||||
CAC1035 | hypothetical protein | 420.5 | 516 | ||||||
CAC1036 | pykA Pyruvate kinase | 26169.5 | 16486 | ||||||
CAC1037 | Predicted xylanase/chitin deacetylase | 2306.5 | 2732 | ||||||
CAC1038 | Predicted metal-binding membrane protein | 959 | 673 | ||||||
CAC1039 | Membrane protein, TerC homolog | 113 | 120 | ||||||
CAC1040 | Predicted amidohydrolase | 178 | 178 | ||||||
CAC1041 | argS arginyl-tRNA synthetase | 986.5 | 609.5 | ||||||
CAC1042 | Predicted membrane protein | 370.5 | 138.5 | ||||||
CAC1043 | Xre family DNA-binding domain and TPR-repeat containing protein | 95 | 67 | ||||||
CAC1044 | NADH flavin oxidoreductase, possible NADH oxidase | 412 | 212.5 | ||||||
CAC1045 | Predicted permease | 201 | 278.5 | ||||||
CAC1046 | Transcriptional regulator, LysR family | 94 | 17 | ||||||
CAC1047 | ribonucleotide-diphosphate reductase alpha subunit | 3679 | 6386 | ||||||
CAC1048 | Carbonic anhydrase/acetyltransferase, isoleucine patch superfamily | 203 | 305 | ||||||
CAC1049 | Uncharacterized conserved protein,ortholog of YaaR B,subtilis | 5000.5 | 3442 | ||||||
CAC1050 | nadE NAD(+) synthetase | 824 | 698.5 | ||||||
CAC1051 | Uncharacterized conserved protein (possible membrane) | 3163 | 2839.5 | ||||||
CAC1052 | Membrane protease subunit, stomatin/prohibitin homolog | 6231 | 5813.5 | ||||||
CAC1053 | LPS glycosyltransferase | 826 | 929.5 | ||||||
CAC1055 | hypothetical protein | 301 | 410 | ||||||
CAC1056 | hypothetical protein | 113.5 | 274 | ||||||
CAC1057 | Uncharcterized protein, shares conserved domain among different RHS family proteins and WAPA of B,subtilis | 79 | 62 | ||||||
CAC1061 | Uncharcterized protein, shares conserved domain among different RHS family proteins and WAPA of B,subtilis | 301 | 257 | ||||||
CAC1062 | hypothetical protein | 382 | 291.5 | ||||||
CAC1063 | TPR-repeat-containing protein | 281 | 143 | ||||||
CAC1064 | TPR-repeat-containing protein | 317 | 284.5 | ||||||
CAC1065 | Uncharacterized protein, related stage III sporulation protein AH of Bacillus sp, | 107 | 33 | ||||||
CAC1072 | Fe-S oxidoreductase | 513.5 | 1212 | ||||||
CAC1073 | hypothetical protein | 552 | 1413 | ||||||
CAC1074 | Predicted permease | 300.5 | 735 | ||||||
CAC1076 | Hypothetical protein, CF-32 family | 346.5 | 233 | ||||||
CAC1077 | Putative translation initiation inhibitor | 930.5 | 929 | ||||||
CAC1078 | Predicted phosphohydrolase, Icc family | 2771.5 | 2532 | ||||||
CAC1079 | Uncharacterized protein, related to enterotoxins of other Clostridiales | 524.5 | 354 | ||||||
CAC1080 | Uncharacterized protein, probably surface-located | 3985.5 | 2136 | ||||||
CAC1081 | Uncharacterized protein, probably surface-located | 2534 | 1132.5 | ||||||
CAC1082 | hypothetical protein | 110 | 133 | ||||||
CAC1084 | Beta-glucosidase family protein | 187 | 4 | ||||||
CAC1085 | Alpha-glucosidase | 109.5 | 108 | ||||||
CAC1086 | xylR Transcriptional regulators of NagC/XylR family | 334.5 | 352.5 | ||||||
CAC1088 | glpX GlpX-like protein (Fructose-1,6-bisphosphatase related protein) | 2221 | 1937 | ||||||
CAC1089 | HPr kinase/phosphorylase | 1768.5 | 1965 | ||||||
CAC1090 | 5-formyltetrahydrofolate cyclo-ligase | 2953 | 3120.5 | ||||||
CAC1091 | putative aminopeptidase 1 | 4407.5 | 4769.5 | ||||||
CAC1092 | Predicted metal-dependent phosphoesterase (PHP family), YciV ortholog | 1564.5 | 1553.5 | ||||||
CAC1095 | Uncharacterized protein, YjiN homolog | 488 | 246.5 | ||||||
CAC1096 | Uncharacterized protein, YjiN homolog | 193.5 | 98.5 | ||||||
CAC1097 | hypothetical protein | 103 | 70 | ||||||
CAC1098 | polA DNA polymerase I | 509.5 | 388 | ||||||
CAC1099 | coaE dephospho-CoA kinase | 950.5 | 922 | ||||||
CAC1100 | Secreted protein, similar to catalytic domain of murein transglycosylase | 324.5 | 431 | ||||||
CAC1101 | Hypothetical protein, CF-34 family(identical) | 9777 | 11405.5 | ||||||
CAC1102 | Predicted membrane protein | 2342.5 | 3247 | ||||||
CAC1103 | Possible metal-binding domain, related to a correspondent domain of site-specific recombinase | 190.5 | 300 | ||||||
CAC1107 | Hypothetical protein, CF-36 family | 198 | 22 | ||||||
CAC1110 | Integrase/recombinase (xerC/xerD family), CF-10 family | 277 | 21.5 | ||||||
CAC1115 | hypothetical protein | 72 | 22 | ||||||
CAC1117 | hypothetical protein | 119 | 13.5 | ||||||
CAC1120 | Phage-related protein, YqbO B,subtilis homolog | 151.5 | 31.5 | ||||||
CAC1121 | Predicted membrane protein | 1145.5 | 1612.5 | ||||||
CAC1130 | hypothetical protein | 324 | 22 |
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2. array (high scan) | pH 4.5 / Cy5 | ||||||||||
ORF | Name | (F 635 median - B635) - B635 SD | (F 532 median - B532) - B532 SD | pH 5.7 / Cy3 | |||||||
CA_P0001 | Oxidoreductase | 89 | 117 | ||||||||
CA_P0002 | Transglutaminase-like predicted protease domain fused ChW-repeats and cell-adhesion domain | 279 | 286 | ||||||||
CA_P0003 | Transglutaminase-like predicted protease domain fused to ChW-repeats and cell-adhesion domain | 155.5 | 237.5 | ||||||||
CA_P0004 | Cysteine protease | 16476 | 271 | ||||||||
CA_P0005 | Uncharacterized protein similar to Bacteriocin immunity protein of mesC/lccI/entI family | 162.5 | 229.5 | ||||||||
CA_P0006 | GntR family HTH transcriptional regulator | 1599 | 1544 | ||||||||
CA_P0007 | hypothetical protein | 957.5 | 1054 | ||||||||
CA_P0009 | Response regulator (CheY + HTH domains) | 3064 | 814.5 | ||||||||
CA_P0010 | bgla Beta_glucosidase | 2148.5 | 642.5 | ||||||||
CA_P0012 | pedb Pediocin immunity protein, PedB | 3817.5 | 2461.5 | ||||||||
CA_P0013 | FAD dependent dehydrogenase | 664 | 744.5 | ||||||||
CA_P0014 | Protein tyrosine phosphatase II superfamily protein | 1588 | 1583.5 | ||||||||
CA_P0015 | GLPQ related phosphodiesterase | 3664 | 3275 | ||||||||
CA_P0019 | grkc Spore germination protein, GRKC | 116 | 94 | ||||||||
CA_P0020 | grka Spore germination protein, GRKA | 201 | 85 | ||||||||
CA_P0021 | hypothetical protein | 19 | 32 | ||||||||
CA_P0023 | hypothetical protein | 44 | 49 | ||||||||
CA_P0024 | MarR family HTH transcriptional regulator | 106.5 | 118 | ||||||||
CA_P0025 | pdc Pyruvate decarboxylase | 5205.5 | 5797 | ||||||||
CA_P0026 | hypothetical protein | 5122 | 5912 | ||||||||
CA_P0027 | Predicted amino acid permeases | 206.5 | 114.5 | ||||||||
CA_P0028 | HTH transcriptional regulator TetR family | 468 | 431.5 | ||||||||
CA_P0031 | hlyU Transcriptional activator HLYU, HTH of ArsR family | 406.5 | 375 | ||||||||
CA_P0032 | Rhodanese-like domain | 228.5 | 167.5 | ||||||||
CA_P0033 | hypothetical protein | 399.5 | 297 | ||||||||
CA_P0034 | Rhodanese-like domain | 2499 | 1767.5 | ||||||||
CA_P0035 | adhe Aldehyde-alcohol dehydrogenase, ADHE1 | 814.5 | 2786.5 | ||||||||
CA_P0036 | Uncharacterized, ortholog of YgaT gene of B,subtillis | 3232.5 | 60284.5 | ||||||||
CA_P0037 | Uncharacterized, ortholog of YgaS gene of B,subtillis | 1103.5 | 61929.5 | ||||||||
CA_P0038 | Uncharacterized conserved protein, YCII family | 171.5 | 622 | ||||||||
CA_P0040 | Xre family DNA-binding domain and TPR repeats containing protein | 1605.5 | 255 | ||||||||
CA_P0044 | hypothetical protein | 1393 | 187 | ||||||||
CA_P0045 | Glycosyl transferase | 1757 | 261.5 | ||||||||
CA_P0046 | TetR family HTH transcriptional regulator | 157 | 7 | ||||||||
CA_P0047 | Sulphohydrolase/Glycosulfatase, Zn-dependent hydrolase | 107 | 76.5 | ||||||||
CA_P0048 | Related to methyl-accepting chemotaxis protein | 601 | 1031.5 | ||||||||
CA_P0049 | Permease, MDR related | 211.5 | 152.5 | ||||||||
CA_P0050 | pnba Para-nitrobenzyl esterase, a/b hydrolase | 2205 | 2468 | ||||||||
CA_P0051 | Oxidoreductase | 98.5 | 62.5 | ||||||||
CA_P0052 | MarR family HTH transcriptional regulator | 259.5 | 354 | ||||||||
CA_P0053 | xynb Xylanase, glycosyl hydrolase family 10 | 4608.5 | 241.5 | ||||||||
CA_P0054 | Xylanase/chitin deacetylase family enzyme | 6967 | 350 | ||||||||
CA_P0055 | hypothetical protein | 249 | 196 | ||||||||
CA_P0056 | pell Pectate lyase, secreted, polysaccharide lyase family | 4865 | 396 | ||||||||
CA_P0057 | Putative glycoportein or S-layer protein | 1320.5 | 688 | ||||||||
CA_P0058 | Rare lipoprotein A RLPA releated protein | 8917 | 10583 | ||||||||
CA_P0059 | Alcohol dehydrogenase | 837 | 775.5 | ||||||||
CA_P0062 | Hypothetical protein, CF-18 family | 151 | 123.5 | ||||||||
CA_P0064 | alf Fructose-bisphosphate aldolase class I | 124 | 32.5 | ||||||||
CA_P0065 | Predicted secreted metalloprotease | 4264.5 | 229.5 | ||||||||
CA_P0066 | ptna Mannose-specific phosphotransferase system component IIAB | 38 | 51 | ||||||||
CA_P0067 | manY/levF Mannose/fructose-specific phosphotransferase system component IIC | 69.5 | 159.5 | ||||||||
CA_P0072 | hypothetical protein | 2581 | 5461.5 | ||||||||
CA_P0073 | ABC ATPase containing transporter | 701 | 1729.5 | ||||||||
CA_P0074 | hypothetical protein | 599.5 | 1349 | ||||||||
CA_P0076 | penicillin binding protein 1A | 530.5 | 935.5 | ||||||||
CA_P0078 | thil Acetyl coenzyme A acetyltransferase (thiolase) | 259.5 | 283.5 | ||||||||
CA_P0079 | thlr ThlR, HTH transcriptional regulator TetR/AcrR family | 1417.5 | 1399.5 | ||||||||
CA_P0080 | Site-Specific Recombinase, Xerd | 300 | 254 | ||||||||
CA_P0081 | TnpR resolvase C-terminal fragment | 136 | 109 | ||||||||
CA_P0082 | crp CRP (cyclic AMP receptor protein) regulatory protein | 740.5 | 617.5 | ||||||||
CA_P0083 | SAM-dependent methyltransferase | 708.5 | 1280.5 | ||||||||
CA_P0084 | hypothetical protein | 887.5 | 1064 | ||||||||
CA_P0085 | Hypothetical secreted protein (fragment) | 474.5 | 507 | ||||||||
CA_P0086 | Permease, MDR related, probably tetracycline resistance protein | 605.5 | 584 | ||||||||
CA_P0087 | HTH transcriptional regulator TetR/AcrR family | 2460 | 3028.5 | ||||||||
CA_P0088 | abf 3-oxoacyl-acyl-carrier protein synthase | 1536.5 | 1659.5 | ||||||||
CA_P0089 | Predicted membrane protein | 134 | 123 | ||||||||
CA_P0090 | ABC-type transporter, ATPase component | 167.5 | 214.5 | ||||||||
CA_P0091 | Predicted regulator of stationary/sporulation gene expression | 2159 | 1306 | ||||||||
CA_P0093 | tnpa TnpA, transposase (3' segment) | 385.5 | 425.5 | ||||||||
CA_P0094 | TnpA, transposase (5' segment) | 464.5 | 407.5 | ||||||||
CA_P0096 | ipyr Inorganic pyrophosphatase | 959 | 746 | ||||||||
CA_P0097 | lipg Carboxyl esterase, a/b hydrolase | 2062.5 | 1594 | ||||||||
CA_P0098 | amyA alpha-amylase | 297 | 309 | ||||||||
CA_P0099 | muts DNA mismatch repair protein, MUTS fragment | 211 | 148 | ||||||||
CA_P0100 | HTH transcriptional regulator TetR/AcrR family | 942 | 583 | ||||||||
CA_P0101 | hypothetical protein | 1041.5 | 599.5 | ||||||||
CA_P0102 | Membrane protein | 8135.5 | 733 | ||||||||
CA_P0103 | arsr Transcriptional regulator HTH-type, ArsR family | 587 | 263.5 | ||||||||
CA_P0104 | arsb Heavy metal resistance membrane protein | 468.5 | 269 | ||||||||
CA_P0105 | arsc Arsenate reductase, arsC, protein-tyrosine-phosphatase family enzyme | 463 | 214 | ||||||||
CA_P0106 | dxs 1-deoxyxylulose-5-phosphate synthase, dehydrogenase | 107 | 109 | ||||||||
CA_P0108 | Predicted HTH containing transcriptional regulator | 782.5 | 600 | ||||||||
CA_P0110 | NH2-acetyltransferase | 226 | 274 | ||||||||
CA_P0111 | NH2-acetyltransferase | 52 | 152 | ||||||||
CA_P0112 | hypothetical protein | 11961.5 | 2907 | ||||||||
CA_P0113 | Solo B3/4 domain (OB-fold DNA/RNA-binding) of Phe-aaRS-beta | 3998.5 | 2880.5 | ||||||||
CA_P0114 | Possible beta-xylosidase, family 43 of glycosyl hydrolases | 293.5 | 65 | ||||||||
CA_P0116 | Xylanase, glycosyl hydrolase family 10 | 2110.5 | 306 | ||||||||
CA_P0117 | Possible beta-xylosidase diverged, family 5/39 of glycosyl hydrolases and alpha-amylase C (Greek key) C-terminal domain | 1687 | 154 | ||||||||
CA_P0118 | Possible xylan degradation enzyme (glycosyl hydrolase family 30-like domain and Ricin B-like domain) | 1520 | 203 | ||||||||
CA_P0119 | Possible xylan degradation enzyme (glycosyl hydrolase family 30-like domain and Ricin B-like domain) | 797.5 | 16 | ||||||||
CA_P0120 | Possible xylan degradation enzyme (glycosyl hydrolase family 43-like domain, cellulose-binding domain and Ricin B-like domain) | 1005 | 35 | ||||||||
CA_P0122 | dTDP-4-keto-L-rhamnose reductase | 11 | 20 | ||||||||
CA_P0123 | hypothetical protein | 833 | 555.5 | ||||||||
CA_P0124 | Permease, MDR related, probably tetracycline resistance protein | 2063.5 | 1624 | ||||||||
CA_P0125 | hypothetical protein | 693.5 | 846.5 |
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3. array (low scan) | pH 4.5 / Cy3 | ||||||||
ORF | Name | (F 635 median - B635) - B635 SD | (F 532 median - B532) - B532 SD | pH 5.7 / Cy5 | |||||
CA_P0002 | Transglutaminase-like predicted protease domain fused ChW-repeats and cell-adhesion domain | 106.5 | 14.5 | ||||||
CA_P0003 | Transglutaminase-like predicted protease domain fused to ChW-repeats and cell-adhesion domain | 64 | 10 | ||||||
CA_P0004 | Cysteine protease | 167.5 | 4352 | ||||||
CA_P0005 | Uncharacterized protein similar to Bacteriocin immunity protein of mesC/lccI/entI family | 50 | 62.5 | ||||||
CA_P0006 | GntR family HTH transcriptional regulator | 326.5 | 314 | ||||||
CA_P0007 | hypothetical protein | 523.5 | 311 | ||||||
CA_P0009 | Response regulator (CheY + HTH domains) | 197 | 376 | ||||||
CA_P0010 | bgla Beta_glucosidase | 181 | 522.5 | ||||||
CA_P0012 | pedb Pediocin immunity protein, PedB | 1352.5 | 1527.5 | ||||||
CA_P0013 | FAD dependent dehydrogenase | 232.5 | 107.5 | ||||||
CA_P0014 | Protein tyrosine phosphatase II superfamily protein | 534 | 238.5 | ||||||
CA_P0015 | GLPQ related phosphodiesterase | 725.5 | 1011.5 | ||||||
CA_P0018 | hypothetical protein | 9 | 7 | ||||||
CA_P0019 | grkc Spore germination protein, GRKC | 22.5 | 27.5 | ||||||
CA_P0020 | grka Spore germination protein, GRKA | 52 | 85.5 | ||||||
CA_P0025 | pdc Pyruvate decarboxylase | 1341 | 601.5 | ||||||
CA_P0026 | hypothetical protein | 1107 | 650 | ||||||
CA_P0027 | Predicted amino acid permeases | 20.5 | 54 | ||||||
CA_P0028 | HTH transcriptional regulator TetR family | 130 | 41 | ||||||
CA_P0031 | hlyU Transcriptional activator HLYU, HTH of ArsR family | 107 | 77.5 | ||||||
CA_P0032 | Rhodanese-like domain | 42.5 | 10.5 | ||||||
CA_P0033 | hypothetical protein | 105 | 71 | ||||||
CA_P0034 | Rhodanese-like domain | 519 | 591 | ||||||
CA_P0035 | adhe Aldehyde-alcohol dehydrogenase, ADHE1 | 324 | 81 | ||||||
CA_P0036 | Uncharacterized, ortholog of YgaT gene of B.subtillis | 36982.5 | 101.5 | ||||||
CA_P0037 | Uncharacterized, ortholog of YgaS gene of B.subtillis | 27184.5 | 32 | ||||||
CA_P0038 | Uncharacterized conserved protein, YCII family | 153.5 | 22 | ||||||
CA_P0044 | hypothetical protein | 76.5 | 268.5 | ||||||
CA_P0045 | Glycosyl transferase | 84 | 377 | ||||||
CA_P0046 | TetR family HTH transcriptional regulator | 10 | 25 | ||||||
CA_P0047 | Sulphohydrolase/Glycosulfatase, Zn-dependent hydrolase | 31 | 19 | ||||||
CA_P0048 | Related to methyl-accepting chemotaxis protein | 248 | 125.5 | ||||||
CA_P0049 | Permease, MDR related | 33.5 | 69.5 | ||||||
CA_P0050 | pnba Para-nitrobenzyl esterase, a/b hydrolase | 471 | 327.5 | ||||||
CA_P0051 | Oxidoreductase | 37 | 32.5 | ||||||
CA_P0052 | MarR family HTH transcriptional regulator | 28 | 42 | ||||||
CA_P0053 | xynb Xylanase, glycosyl hydrolase family 10 | 102.5 | 2182 | ||||||
CA_P0054 | Xylanase/chitin deacetylase family enzyme | 150 | 2618.5 | ||||||
CA_P0055 | hypothetical protein | 102 | 218.5 | ||||||
CA_P0056 | pell Pectate lyase, secreted, polysaccharide lyase family | 140 | 904 | ||||||
CA_P0057 | Putative glycoportein or S-layer protein | 554.5 | 373.5 | ||||||
CA_P0058 | Rare lipoprotein A RLPA releated protein | 2633.5 | 1793.5 | ||||||
CA_P0059 | Alcohol dehydrogenase | 181.5 | 176 | ||||||
CA_P0061 | hypothetical protein | 18 | 11 | ||||||
CA_P0062 | Hypothetical protein, CF-18 family | 42 | 7.5 | ||||||
CA_P0065 | Predicted secreted metalloprotease | 112.5 | 1834.5 | ||||||
CA_P0066 | ptna Mannose-specific phosphotransferase system component IIAB | 46 | 6 | ||||||
CA_P0067 | manY/levF Mannose/fructose-specific phosphotransferase system component IIC | 40.5 | 7 | ||||||
CA_P0070 | HAD phosphatase superfamily protein | 5 | 16 | ||||||
CA_P0072 | hypothetical protein | 2495 | 384.5 | ||||||
CA_P0073 | ABC ATPase containing transporter | 1289.5 | 145 | ||||||
CA_P0074 | hypothetical protein | 1090.5 | 105.5 | ||||||
CA_P0076 | penicillin binding protein 1A | 320 | 106 | ||||||
CA_P0077 | Uncharacterized Fe-S protein | 4 | 2 | ||||||
CA_P0078 | thil Acetyl coenzyme A acetyltransferase (thiolase) | 66.5 | 29.5 | ||||||
CA_P0079 | thlr ThlR, HTH transcriptional regulator TetR/AcrR family | 267 | 76.5 | ||||||
CA_P0080 | Site-Specific Recombinase, Xerd | 67 | 52.5 | ||||||
CA_P0082 | crp CRP (cyclic AMP receptor protein) regulatory protein | 122.5 | 188 | ||||||
CA_P0083 | SAM-dependent methyltransferase | 365 | 90.5 | ||||||
CA_P0084 | hypothetical protein | 260 | 168.5 | ||||||
CA_P0085 | Hypothetical secreted protein (fragment) | 138.5 | 105 | ||||||
CA_P0086 | Permease, MDR related, probably tetracycline resistance protein | 296.5 | 203.5 | ||||||
CA_P0087 | HTH transcriptional regulator TetR/AcrR family | 853.5 | 930 | ||||||
CA_P0088 | abf 3-oxoacyl-acyl-carrier protein synthase | 941.5 | 1379.5 | ||||||
CA_P0089 | Predicted membrane protein | 36.5 | 80.5 | ||||||
CA_P0090 | ABC-type transporter, ATPase component | 66 | 128.5 | ||||||
CA_P0091 | Predicted regulator of stationary/sporulation gene expression | 257.5 | 291.5 | ||||||
CA_P0093 | tnpa TnpA, transposase (3' segment) | 98.5 | 66.5 | ||||||
CA_P0094 | TnpA, transposase (5' segment) | 104.5 | 29 | ||||||
CA_P0096 | ipyr Inorganic pyrophosphatase | 204 | 129 | ||||||
CA_P0097 | lipg Carboxyl esterase, a/b hydrolase | 671.5 | 391 | ||||||
CA_P0098 | amyA alpha-amylase | 81 | 36.5 | ||||||
CA_P0099 | muts DNA mismatch repair protein, MUTS fragment | 11 | 11 | ||||||
CA_P0100 | HTH transcriptional regulator TetR/AcrR family | 85 | 189.5 | ||||||
CA_P0101 | hypothetical protein | 58.5 | 158.5 | ||||||
CA_P0102 | Membrane protein | 197.5 | 1702 | ||||||
CA_P0103 | arsr Transcriptional regulator HTH-type, ArsR family | 68.5 | 77.5 | ||||||
CA_P0104 | arsb Heavy metal resistance membrane protein | 72.5 | 117.5 | ||||||
CA_P0105 | arsc Arsenate reductase, arsC, protein-tyrosine-phosphatase family enzyme | 81 | 195 | ||||||
CA_P0106 | dxs 1-deoxyxylulose-5-phosphate synthase, dehydrogenase | 27 | 15 | ||||||
CA_P0107 | HTH transcriptional regulator MerR family | 50 | 36.5 | ||||||
CA_P0108 | Predicted HTH containing transcriptional regulator | 111 | 105.5 | ||||||
CA_P0110 | NH2-acetyltransferase | 52.5 | 66.5 | ||||||
CA_P0111 | NH2-acetyltransferase | 15 | 23.5 | ||||||
CA_P0112 | hypothetical protein | 838.5 | 4584.5 | ||||||
CA_P0113 | Solo B3/4 domain (OB-fold DNA/RNA-binding) of Phe-aaRS-beta | 990.5 | 461.5 | ||||||
CA_P0114 | Possible beta-xylosidase, family 43 of glycosyl hydrolases | 36 | 37.5 | ||||||
CA_P0116 | Xylanase, glycosyl hydrolase family 10 | 59 | 217 | ||||||
CA_P0117 | Possible beta-xylosidase diverged, family 5/39 of glycosyl hydrolases and alpha-amylase C (Greek key) C-terminal domain | 55 | 251.5 | ||||||
CA_P0118 | Possible xylan degradation enzyme (glycosyl hydrolase family 30-like domain and Ricin B-like domain) | 38 | 244 | ||||||
CA_P0119 | Possible xylan degradation enzyme (glycosyl hydrolase family 30-like domain and Ricin B-like domain) | 24.5 | 189.5 | ||||||
CA_P0120 | Possible xylan degradation enzyme (glycosyl hydrolase family 43-like domain, cellulose-binding domain and Ricin B-like domain) | 28 | 211.5 | ||||||
CA_P0121 | Leu-rich protein family protein, YaeG (E.coli) homolog | 1 | 7 | ||||||
CA_P0123 | hypothetical protein | 127.5 | 96 | ||||||
CA_P0124 | Permease, MDR related, probably tetracycline resistance protein | 507 | 909.5 | ||||||
CA_P0125 | hypothetical protein | 223 | 119 | ||||||
CA_P0126 | Uncharacterized protein (NN.term domain homologous to B.subtilis (gi|833839) | 271 | 159 | ||||||
CA_P0127 | HTH transcriptional regulator TetR family | 62 | 29 |
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4. array (low scan) | pH 4.5 / Cy5 | ||||||||
ORF | Name | (F 635 median - B635) - B635 SD | (F 532 median - B532) - B532 SD | pH 5.7 / Cy3 | |||||
CA_P0002 | Transglutaminase-like predicted protease domain fused ChW-repeats and cell-adhesion domain | 16.5 | 45 | ||||||
CA_P0003 | Transglutaminase-like predicted protease domain fused to ChW-repeats and cell-adhesion domain | 8.5 | 28.5 | ||||||
CA_P0004 | Cysteine protease | 3907 | 131.5 | ||||||
CA_P0005 | Uncharacterized protein similar to Bacteriocin immunity protein of mesC/lccI/entI family | 102 | 33 | ||||||
CA_P0006 | GntR family HTH transcriptional regulator | 269.5 | 312 | ||||||
CA_P0007 | hypothetical protein | 159.5 | 180 | ||||||
CA_P0009 | Response regulator (CheY + HTH domains) | 596 | 133.5 | ||||||
CA_P0010 | bgla Beta_glucosidase | 508.5 | 160 | ||||||
CA_P0012 | pedb Pediocin immunity protein, PedB | 2200 | 842 | ||||||
CA_P0013 | FAD dependent dehydrogenase | 190.5 | 138 | ||||||
CA_P0014 | Protein tyrosine phosphatase II superfamily protein | 389.5 | 371.5 | ||||||
CA_P0015 | GLPQ related phosphodiesterase | 1249.5 | 475.5 | ||||||
CA_P0017 | grkb1 Spore germination protein, GRKB | 10 | 3 | ||||||
CA_P0019 | grkc Spore germination protein, GRKC | 43.5 | 12 | ||||||
CA_P0020 | grka Spore germination protein, GRKA | 88 | 31.5 | ||||||
CA_P0021 | hypothetical protein | 13 | 7 | ||||||
CA_P0023 | hypothetical protein | 3 | 12 | ||||||
CA_P0025 | pdc Pyruvate decarboxylase | 788.5 | 1078.5 | ||||||
CA_P0026 | hypothetical protein | 602 | 485 | ||||||
CA_P0027 | Predicted amino acid permeases | 61 | 28.5 | ||||||
CA_P0028 | HTH transcriptional regulator TetR family | 83 | 92 | ||||||
CA_P0031 | hlyU Transcriptional activator HLYU, HTH of ArsR family | 80.5 | 69 | ||||||
CA_P0032 | Rhodanese-like domain | 21 | 17 | ||||||
CA_P0033 | hypothetical protein | 87.5 | 59 | ||||||
CA_P0034 | Rhodanese-like domain | 636 | 396.5 | ||||||
CA_P0035 | adhe Aldehyde-alcohol dehydrogenase, ADHE1 | 87 | 243 | ||||||
CA_P0036 | Uncharacterized, ortholog of YgaT gene of B.subtillis | 258 | 54827.5 | ||||||
CA_P0037 | Uncharacterized, ortholog of YgaS gene of B.subtillis | 76 | 28223 | ||||||
CA_P0038 | Uncharacterized conserved protein, YCII family | 30.5 | 108.5 | ||||||
CA_P0040 | Xre family DNA-binding domain and TPR repeats containing protein | 233 | 48 | ||||||
CA_P0044 | hypothetical protein | 290 | 37.5 | ||||||
CA_P0045 | Glycosyl transferase | 329 | 25 | ||||||
CA_P0046 | TetR family HTH transcriptional regulator | 12 | 7 | ||||||
CA_P0047 | Sulphohydrolase/Glycosulfatase, Zn-dependent hydrolase | 29 | 18 | ||||||
CA_P0048 | Related to methyl-accepting chemotaxis protein | 124.5 | 173.5 | ||||||
CA_P0049 | Permease, MDR related | 120.5 | 25.5 | ||||||
CA_P0050 | pnba Para-nitrobenzyl esterase, a/b hydrolase | 338 | 427.5 | ||||||
CA_P0051 | Oxidoreductase | 38.5 | 21.5 | ||||||
CA_P0052 | MarR family HTH transcriptional regulator | 58 | 24 | ||||||
CA_P0053 | xynb Xylanase, glycosyl hydrolase family 10 | 1977.5 | 82.5 | ||||||
CA_P0054 | Xylanase/chitin deacetylase family enzyme | 3082.5 | 98 | ||||||
CA_P0055 | hypothetical protein | 221.5 | 75.5 | ||||||
CA_P0056 | pell Pectate lyase, secreted, polysaccharide lyase family | 1006 | 88.5 | ||||||
CA_P0057 | Putative glycoportein or S-layer protein | 455 | 399.5 | ||||||
CA_P0058 | Rare lipoprotein A RLPA releated protein | 1842 | 2759.5 | ||||||
CA_P0059 | Alcohol dehydrogenase | 146 | 155.5 | ||||||
CA_P0061 | hypothetical protein | 1 | 10 | ||||||
CA_P0062 | Hypothetical protein, CF-18 family | 12.5 | 22 | ||||||
CA_P0064 | alf Fructose-bisphosphate aldolase class I | 6.5 | 7 | ||||||
CA_P0065 | Predicted secreted metalloprotease | 1836 | 93 | ||||||
CA_P0066 | ptna Mannose-specific phosphotransferase system component IIAB | 2 | 21 | ||||||
CA_P0067 | manY/levF Mannose/fructose-specific phosphotransferase system component IIC | 3 | 30 | ||||||
CA_P0072 | hypothetical protein | 584 | 1204 | ||||||
CA_P0073 | ABC ATPase containing transporter | 153.5 | 339.5 | ||||||
CA_P0074 | hypothetical protein | 154.5 | 348.5 | ||||||
CA_P0076 | penicillin binding protein 1A | 119.5 | 179.5 | ||||||
CA_P0077 | Uncharacterized Fe-S protein | 3.5 | 8.5 | ||||||
CA_P0078 | thil Acetyl coenzyme A acetyltransferase (thiolase) | 31 | 76.5 | ||||||
CA_P0079 | thlr ThlR, HTH transcriptional regulator TetR/AcrR family | 122.5 | 172.5 | ||||||
CA_P0080 | Site-Specific Recombinase, Xerd | 51 | 42 | ||||||
CA_P0081 | TnpR resolvase C-terminal fragment | 22 | 24 | ||||||
CA_P0082 | crp CRP (cyclic AMP receptor protein) regulatory protein | 249 | 92 | ||||||
CA_P0083 | SAM-dependent methyltransferase | 117.5 | 286 | ||||||
CA_P0084 | hypothetical protein | 210 | 219.5 | ||||||
CA_P0085 | Hypothetical secreted protein (fragment) | 120.5 | 101.5 | ||||||
CA_P0086 | Permease, MDR related, probably tetracycline resistance protein | 223 | 257 | ||||||
CA_P0087 | HTH transcriptional regulator TetR/AcrR family | 1078.5 | 746.5 | ||||||
CA_P0088 | abf 3-oxoacyl-acyl-carrier protein synthase | 1604 | 935.5 | ||||||
CA_P0089 | Predicted membrane protein | 110 | 40 | ||||||
CA_P0090 | ABC-type transporter, ATPase component | 133 | 72 | ||||||
CA_P0091 | Predicted regulator of stationary/sporulation gene expression | 554 | 199 | ||||||
CA_P0093 | tnpa TnpA, transposase (3' segment) | 54 | 75 | ||||||
CA_P0094 | TnpA, transposase (5' segment) | 27 | 56 | ||||||
CA_P0096 | ipyr Inorganic pyrophosphatase | 155 | 138.5 | ||||||
CA_P0097 | lipg Carboxyl esterase, a/b hydrolase | 462.5 | 400 | ||||||
CA_P0098 | amyA alpha-amylase | 47 | 48.5 | ||||||
CA_P0099 | muts DNA mismatch repair protein, MUTS fragment | 24.5 | 4 | ||||||
CA_P0100 | HTH transcriptional regulator TetR/AcrR family | 163.5 | 75 | ||||||
CA_P0101 | hypothetical protein | 205 | 73.5 | ||||||
CA_P0102 | Membrane protein | 1998 | 154 | ||||||
CA_P0103 | arsr Transcriptional regulator HTH-type, ArsR family | 141 | 36 | ||||||
CA_P0104 | arsb Heavy metal resistance membrane protein | 141 | 44 | ||||||
CA_P0105 | arsc Arsenate reductase, arsC, protein-tyrosine-phosphatase family enzyme | 141 | 54 | ||||||
CA_P0106 | dxs 1-deoxyxylulose-5-phosphate synthase, dehydrogenase | 18.5 | 28 | ||||||
CA_P0107 | HTH transcriptional regulator MerR family | 51.5 | 38 | ||||||
CA_P0108 | Predicted HTH containing transcriptional regulator | 114.5 | 76 | ||||||
CA_P0110 | NH2-acetyltransferase | 56 | 42 | ||||||
CA_P0112 | hypothetical protein | 4686.5 | 784.5 | ||||||
CA_P0113 | Solo B3/4 domain (OB-fold DNA/RNA-binding) of Phe-aaRS-beta | 658 | 591.5 | ||||||
CA_P0114 | Possible beta-xylosidase, family 43 of glycosyl hydrolases | 19 | 16 | ||||||
CA_P0115 | xynD Endo-1,4-beta-xylanase XynD B.subtilis ortholog (family 43 glycosyl hydrolase and cellulose-binding domain) | 9 | 4 | ||||||
CA_P0116 | Xylanase, glycosyl hydrolase family 10 | 224.5 | 53 | ||||||
CA_P0117 | Possible beta-xylosidase diverged, family 5/39 of glycosyl hydrolases and alpha-amylase C (Greek key) C-terminal domain | 339.5 | 45 | ||||||
CA_P0118 | Possible xylan degradation enzyme (glycosyl hydrolase family 30-like domain and Ricin B-like domain) | 262.5 | 27.5 | ||||||
CA_P0119 | Possible xylan degradation enzyme (glycosyl hydrolase family 30-like domain and Ricin B-like domain) | 224 | 17 | ||||||
CA_P0120 | Possible xylan degradation enzyme (glycosyl hydrolase family 43-like domain, cellulose-binding domain and Ricin B-like domain) | 199.5 | 15 | ||||||
CA_P0123 | hypothetical protein | 102 | 79.5 | ||||||
CA_P0124 | Permease, MDR related, probably tetracycline resistance protein | 1062.5 | 421 |