Selected Cell
Cell:
Value:
Read me_data
Transcriptome_data
Read me_amounts
1. Array
2. Array
3. Array
4. Array
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Description: | This data-sheet reflects the transcriptome of C. acetobutylicum concerning the comparison of acidogenesis to solventogenesis. Genes with average fold regulation > 1.0 (significant > 3.0) showed elevated transcript level in the acidogenesis (pH 5.7) or repressed transcript level in the solventogenesis (pH 4.5), respectively. Genes were figured out as significant induced, if the average fold regulation was > 3.0 and at least three out of four micro arrays were > 2.0.Furthermore, genes with fold regulation < 1.0 (significant < 0.33) showed elevated transcript level in the solventogenesis (pH 4.5) or repressed transcript level in the acidogenesis (pH 5.7), respectively. Genes were figured out as significant induced, if the average fold regulation was < 0.33 and at least three out of four micro arrays were < 0.5. | ||||||||
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CAC1042 | Predicted membrane protein | 1.8010000000000002 | 1.4534883720930234 | 0.41600000000000004 | 1.6168148746968471 | 1.3218258116974675 | 0.6203444959514923 | ||
CAC1044 | NADH flavin oxidoreductase, possible NADH oxidase | 1.456 | 1.455604075691412 | 2.401 | 2.4242424242424243 | 1.934211624983459 | 0.5525013169762953 | ||
CAC1045 | Predicted permease | 0.64 | 0.54421768707483 | 0.41200000000000003 | 0.2551996937603675 | 0.4628543452087994 | 0.16704011005922803 | ||
CAC1046 | Transcriptional regulator, LysR family | 1.06 | 1.4224751066856332 | 0.6585 | 0.8340283569641367 | 0.9937508659124425 | 0.32969574122903267 | ||
CAC1047 | ribonucleotide-diphosphate reductase alpha subunit | 0.5725 | 0.5635390250774865 | 0.505 | 0.23693875133278045 | 0.46949444410256674 | 0.1579000976310744 | ||
CAC1048 | Carbonic anhydrase/acetyltransferase, isoleucine patch superfamily | 0.601 | 0.6631299734748011 | 1.012 | 0.8561643835616439 | 0.7830735892591113 | 0.18733822231425057 | ||
CAC1049 | Uncharacterized conserved protein,ortholog of YaaR B,subtilis | 1.4285 | 1.010611419909045 | 3.6239999999999997 | 2.1810250817884405 | 2.061034125424371 | 1.1490209506047078 | ||
CAC1050 | nadE NAD(+) synthetase | 1.0955 | 1.0432968179447053 | 0.831 | 0.7654037504783774 | 0.9338001421057706 | 0.16027224753824812 | ||
CAC1051 | Uncharacterized conserved protein (possible membrane) | 1.0910000000000002 | 1.0804970286331712 | 1.609 | 0.8598452278589853 | 1.1600855641230392 | 0.3176872573303828 | ||
CAC1052 | Membrane protease subunit, stomatin/prohibitin homolog | 1.0605 | 0.9610764055742431 | 1.8965 | 0.9000900090009001 | 1.204541603643786 | 0.4660187700153196 | ||
CAC1053 | LPS glycosyltransferase | 0.8445 | 0.7791195948578106 | 1.1525 | 0.5787037037037037 | 0.8387058246403786 | 0.2378038257534933 | ||
CAC1055 | hypothetical protein | 0.6765 | 0.6598482349059717 | 0.926 | 0.6557377049180328 | 0.7295214849560012 | 0.13129292023316835 | ||
CAC1056 | hypothetical protein | 0.419 | 0.6205398696866274 | 0.2185 | 0.2920560747663551 | 0.38752398611324557 | 0.17604011988391685 | ||
CAC1061 | Uncharcterized protein, shares conserved domain among different RHS family proteins and WAPA of B,subtilis | 0.995 | 0.9699321047526672 | 1.8925 | 1.6963528413910096 | 1.3884462365359191 | 0.47568571323310427 | ||
CAC1062 | hypothetical protein | 1.1025 | 0.7880220646178092 | 1.51285930408472 | 1.1344604562341765 | 0.3634740142039394 | |||
CAC1063 | TPR-repeat-containing protein | 1.3165 | 0.8699434536755111 | 1.803 | 1.3298144845585036 | 0.46667074719125046 | |||
CAC1064 | TPR-repeat-containing protein | 0.92 | 1.0126582278481011 | 1.733 | 1.923076923076923 | 1.397183787731256 | 0.5049423702111042 | ||
CAC1065 | Uncharacterized protein, related stage III sporulation protein AH of Bacillus sp, | 1.005 | 0.832639467110741 | 0.917 | 0.9182131557035804 | 0.08618667028339073 | |||
CAC1072 | Fe-S oxidoreductase | 0.42100000000000004 | 0.41271151465125877 | 0.6495 | 0.34572169403630076 | 0.4572333021718899 | 0.1325347295278017 | ||
CAC1073 | hypothetical protein | 0.387 | 0.44189129474149363 | 0.439 | 0.41692724619553884 | 0.42120463523425816 | 0.02538284208680613 | ||
CAC1074 | Predicted permease | 0.3945 | 0.446927374301676 | 0.388 | 0.4157139887757223 | 0.41128534076934964 | 0.026545070081979438 | ||
CAC1076 | Hypothetical protein, CF-32 family | 1.232 | 0.9779951100244499 | 1.8655 | 1.06951871657754 | 1.2862534566504975 | 0.4001945990640017 | ||
CAC1077 | Putative translation initiation inhibitor | 0.953 | 0.8206811653672548 | 1.8184999999999998 | 1.0735373054213635 | 1.1664296176971545 | 0.4468105337296773 | ||
CAC1078 | Predicted phosphohydrolase, Icc family | 1.0745 | 0.898876404494382 | 1.184 | 1.1641443538998837 | 1.0803801895985665 | 0.13004063591250592 | ||
CAC1079 | Uncharacterized protein, related to enterotoxins of other Clostridiales | 1.3025 | 1.2562814070351758 | 3.0765000000000002 | 2.5380710659898478 | 2.0433381182562558 | 0.909300747387988 | ||
CAC1080 | Uncharacterized protein, probably surface-located | 1.8054999999999999 | 1.9249278152069296 | 13.679 | 6.134969325153374 | 5.886099285090076 | 5.571756389403571 | ||
CAC1081 | Uncharacterized protein, probably surface-located | 2.0945 | 2.061855670103093 | 12.9855 | 5.602240896358544 | 5.686024141615409 | 5.142081621582044 | ||
CAC1082 | hypothetical protein | 0.628 | 0.9456264775413711 | 0.743 | 0.9643201542912248 | 0.820236657958149 | 0.16268896168879907 | ||
CAC1085 | Alpha-glucosidase | 1.2694999999999999 | 1.4471780028943562 | 5.0275 | 2.358490566037736 | 2.525667142233023 | 1.734763227718045 | ||
CAC1086 | xylR Transcriptional regulators of NagC/XylR family | 0.8075 | 1.2870012870012872 | 2.239 | 1.3071895424836601 | 1.4101727073712367 | 0.5988727756551512 | ||
CAC1088 | glpX GlpX-like protein (Fructose-1,6-bisphosphatase related protein) | 1.1255 | 0.8861320336730174 | 2.5564999999999998 | 1.1594202898550725 | 1.4318880808820222 | 0.7595424027972578 | ||
CAC1089 | HPr kinase/phosphorylase | 0.876 | 0.9564801530368244 | 1.545 | 0.9823182711198428 | 1.0899496060391667 | 0.30672674815948986 | ||
CAC1090 | 5-formyltetrahydrofolate cyclo-ligase | 0.8755 | 0.8658008658008658 | 1.7405 | 0.9945300845350571 | 1.1190827375839807 | 0.418392572445628 | ||
CAC1091 | putative aminopeptidase 1 | 0.917 | 0.7927070947284979 | 1.4645000000000001 | 1.1507479861910241 | 1.0812387702298805 | 0.29549145659544734 | ||
CAC1092 | Predicted metal-dependent phosphoesterase (PHP family), YciV ortholog | 0.972 | 1.0330578512396695 | 1.444 | 1.392757660167131 | 1.2104538778517002 | 0.2422863748661005 | ||
CAC1095 | Uncharacterized protein, YjiN homolog | 1.556 | 1.2911555842479019 | 2.085 | 1.4749262536873158 | 1.6017704594838043 | 0.3406742222176546 | ||
CAC1096 | Uncharacterized protein, YjiN homolog | 1.3135 | 1.3717421124828533 | 1.1869999999999998 | 1.0389610389610389 | 1.227800787860973 | 0.14763537849469846 | ||
CAC1097 | hypothetical protein | 0.793 | 0.8944543828264759 | 0.7835 | 0.8236514609421587 | 0.06150083585218513 | |||
CAC1098 | polA DNA polymerase I | 1.1284999999999998 | 0.944733112895607 | 3.8040000000000003 | 1.8484288354898335 | 1.93141548709636 | 1.307883140713656 | ||
CAC1099 | coaE dephospho-CoA kinase | 0.9804999999999999 | 0.8406893652795292 | 2.6025 | 1.819836214740673 | 1.5608813950050504 | 0.8180354597620061 | ||
CAC1100 | Secreted protein, similar to catalytic domain of murein transglycosylase | 0.6835 | 0.8406893652795292 | 0.9929999999999999 | 1.2995451591942822 | 0.9541836311184528 | 0.2626352807613676 | ||
CAC1101 | Hypothetical protein, CF-34 family(identical) | 0.853 | 0.9433962264150942 | 0.549 | 0.6416426050689766 | 0.7467597078710178 | 0.18267587639998797 | ||
CAC1102 | Predicted membrane protein | 0.7144999999999999 | 0.639386189258312 | 1.4689999999999999 | 1.467351430667645 | 1.0725594049814893 | 0.4578469399408731 | ||
CAC1103 | Possible metal-binding domain, related to a correspondent domain of site-specific recombinase | 0.573 | 0.6462035541195477 | 0.7765 | 0.5772005772005773 | 0.6432260328300312 | 0.09497696639426696 | ||
CAC1107 | Hypothetical protein, CF-36 family | 2.77 | 3.6563071297989027 | 1.699235344095157 | 2.7085141579646863 | 0.9799836096473784 | |||
CAC1110 | Integrase/recombinase (xerC/xerD family), CF-10 family | 2.9415 | 3.4843205574912894 | 1.251 | 1.0911074740861975 | 2.1919820078943717 | 1.2012893109256415 | ||
CAC1117 | hypothetical protein | 1.392 | 1.858736059479554 | 0.9795 | 1.2406947890818858 | 1.3677327121403597 | 0.3690241460163223 | ||
CAC1121 | Predicted membrane protein | 0.6965 | 0.6365372374283896 | 0.428 | 0.3732736095558044 | 0.5335777117460485 | 0.1570439368830564 | ||
CAC1131 | hypothetical protein | 3.24 | 3.7037037037037033 | 1.5575 | 2.247191011235955 | 2.6870986787349147 | 0.9675910945526024 | ||
CAC1132 | hypothetical protein | 3.597 | 3.937007874015748 | 1.662 | 1.7436791630340016 | 2.7349217592624377 | 1.200265652055462 | ||
CAC1133 | Phage related protein, YonE B,subtilis homolog | 3.147 | 4.149377593360996 | 1.4388489208633093 | 2.9117421714081018 | 1.3704930155033075 | |||
CAC1138 | hypothetical protein | 1.8275 | 1.902949571836346 | 0.7015 | 0.9161704076958315 | 1.3370299948830442 | 0.6169405590011263 | ||
CAC1142 | uvrD ATP-dependent DNA helicase, uvrD-like | 1.137 | 1.0183299389002036 | 0.8406893652795292 | 0.9986731013932443 | 0.14913011603191711 | |||
CAC1160 | hypothetical protein | 1.4895 | 1.0314595152140278 | 3.51 | 1.6339869281045751 | 1.9162366108296505 | 1.0931119595001177 | ||
CAC1171 | hypothetical protein | 1.7805 | 1.547987616099071 | 2.1625 | 1.5267175572519083 | 1.7544262933377448 | 0.29533719948450227 | ||
CAC1172 | Predicted integrase of XerC/XerD family, diverged | 1.838 | 1.6556291390728477 | 1.982 | 1.7636684303350971 | 1.8098243923519863 | 0.13704604299141898 | ||
CAC1173 | hypothetical protein | 1.972 | 1.3596193065941535 | 1.371 | 1.0587612493382743 | 1.4403451389831068 | 0.3827917468610705 | ||
CAC1176 | hypothetical protein | 1.4165 | 1.2779552715654952 | 0.991 | 1 | 1.1713638178913737 | 0.21083180552422842 | ||
CAC1179 | hypothetical protein | 1.509 | 1.8115942028985506 | 0.52 | 1.2801980676328502 | 0.6755121312245198 | |||
CAC1181 | Phage related protein, YorF B,subtilis homolog | 2.135 | 1.9723865877712032 | 0.9005000000000001 | 1.277139208173691 | 1.5712564489862235 | 0.581701912423383 | ||
CAC1182 | Phage related protein, YorG B,subtilis homolog | 1.6595 | 1.483679525222552 | 1.1587485515643106 | 1.4339760255956209 | 0.25404887656508834 | |||
CAC1185 | hypothetical protein | 1.405 | 1.278772378516624 | 1.647 | 1.6764459346186085 | 1.501804578283808 | 0.19209008506383812 | ||
CAC1186 | hypothetical protein | 1.5785 | 1.2995451591942822 | 2.3835 | 1.457725947521866 | 1.6798177766790372 | 0.4828270937841685 | ||
CAC1187 | hypothetical protein | 1.323 | 1.3297872340425532 | 2.0785 | 1.352265043948614 | 1.5208880694977918 | 0.3719516129574794 | ||
CAC1188 | hypothetical protein | 2.235 | 1.349527665317139 | 1.596 | 1.095290251916758 | 1.5689544793084742 | 0.4888264937008838 | ||
CAC1189 | hypothetical protein | 1.216 | 1.2755102040816326 | 1.278772378516624 | 1.2567608608660856 | 0.03533760432484591 | |||
CAC1191 | hypothetical protein | 1.117 | 1.6666666666666667 | 0.39 | 1.057888888888889 | 0.6403827269977201 | |||
CAC1195 | ligA DNA ligase | 1.1755 | 0.9057971014492753 | 3.1715 | 1.892147587511826 | 1.7862361722402753 | 1.01297330169529 | ||
CAC1196 | hypothetical protein | 1.566 | 1.5936254980079683 | 1.395 | 1.5182084993359897 | 0.10759201999458842 | |||
CAC1197 | hypothetical protein | 2.2729999999999997 | 1.7825311942959003 | 1.282051282051282 | 1.779194158782394 | 0.4954827870426627 | |||
CAC1198 | recJ Single-stranded-DNA-specific exonuclease (recJ) | 1.5035 | 1.5337423312883436 | 1.276324186343331 | 1.4378555058772247 | 0.1407050995636251 | |||
CAC1205 | hypothetical protein | 1.9515 | 1.7605633802816902 | 0.694 | 0.6426735218508998 | 1.2621842255331475 | 0.6904502987032654 | ||
CAC1209 | nrdD anaerobic ribonucleoside triphosphate reductase | 1.792 | 1.8115942028985506 | 0.8764241893076249 | 1.4933394640687252 | 0.5343541198231573 | |||
CAC1214 | Xre family DNA-binding domain and TPR-repeat containing protein | 0.2965 | 0.25477707006369427 | 0.3755 | 0.3606853020739405 | 0.32186559303440865 | 0.056355723296585836 | ||
CAC1217 | Guanylate kinase (P-loop type) | 1.679 | 1.3440860215053763 | 0.4395 | 0.8431703204047218 | 1.0764390854775245 | 0.5461441364825452 | ||
CAC1221 | hypothetical protein | 0.673 | 2.1052631578947367 | 0.416 | 1.0647543859649122 | 0.9102231200904445 | |||
CAC1225 | hypothetical protein | 1.3984999999999999 | 1.4388489208633095 | 0.466 | 1.1011163069544365 | 0.5503967218046357 | |||
CAC1227 | hypothetical protein | 1.42 | 1.949317738791423 | 0.5945 | 1.321272579597141 | 0.6827833506981027 | |||
CAC1228 | cisA Site-specific DNA recombinase | 1.1735 | 0.8944543828264759 | 1.301 | 0.5929439667951378 | 0.9904745874054034 | 0.3147352366315902 | ||
CAC1230 | hypothetical protein | 2.592 | 2.6041666666666665 | 6.8605 | 2.3391812865497075 | 3.5989619883040938 | 2.1777869344888554 | ||
CAC1231 | Predicted dehydrogenase, YULF B,subtilis ortholog | 2.0004999999999997 | 1.6934801016088061 | 7.0625 | 3.773584905660377 | 3.6325162518172953 | 2.4636035338439863 | ||
CAC1233 | chev Chemotaxis protein CheV ortholog (CheW-like adaptor domain and CheY-like reciever domain) | 0.511 | 0.6053268765133172 | 1.5405 | 1.1305822498586773 | 0.9468522815929986 | 0.4805486893449365 | ||
CAC1234 | pheB hypothetical protein | 1.3555000000000001 | 1.596169193934557 | 1.2690000000000001 | 1.037344398340249 | 1.3145033980687015 | 0.23087082412533572 | ||
CAC1235 | thrB Homoserine kinase (thrB) | 1.208 | 1.1933174224343677 | 0.7895 | 0.7692307692307692 | 0.9900120479162842 | 0.24344833602442506 | ||
CAC1237 | hypothetical protein | 1.661 | 1.3689253935660508 | 3.427 | 2.178649237472767 | 2.1588936577597044 | 0.909291286484577 | ||
CAC1238 | hypothetical protein | 1.353 | 1.1507479861910241 | 1.5995 | 1.7825311942959 | 1.4714447951217309 | 0.276916651718728 | ||
CAC1239 | Predicted membrane protein | 1.133 | 1.06439595529537 | 1.472 | 1.044932079414838 | 1.178582008677552 | 0.19922566394728286 | ||
CAC1240 | maf Maf-like protein | 1.154 | 1.0493179433368311 | 1.5590000000000002 | 1.1594202898550725 | 1.2304345582979759 | 0.22482863527623084 | ||
CAC1241 | radC DNA repair protein RadC | 0.9430000000000001 | 0.9103322712790168 | 1.9335 | 1.2376237623762376 | 1.2561140084138136 | 0.47497335461990386 | ||
CAC1242 | mreB mreB | 0.9175 | 0.9174311926605504 | 1.4329999999999998 | 1.1855364552459988 | 1.1133669119766372 | 0.24774207504730678 | ||
CAC1243 | mreC Shape-determining protein mreC | 0.967 | 1.0368066355624677 | 1.1815 | 0.9272137227630969 | 1.028130089581391 | 0.11183114178082373 | ||
CAC1244 | Predicted membrane protein | 0.988 | 1.1160714285714286 | 1.2365 | 0.8460236886632826 | 1.0466487793086778 | 0.16788199877643692 | ||
CAC1245 | pbpA Penicillin-binding protein 2 | 0.9395 | 0.959692898272553 | 1.4495 | 0.9615384615384615 | 1.0775578399527537 | 0.2481622978603224 | ||
CAC1246 | pbpA Penicillin-binding protein 2 | 1.12 | 0.9465215333648841 | 2.0595 | 1.33422281521014 | 1.365061087143756 | 0.4893624073609487 | ||
CAC1248 | minC septum formation inhibitor | 0.8009999999999999 | 0.8227067050596463 | 0.99 | 0.936768149882904 | 0.8876187137356375 | 0.0905795512064921 | ||
CAC1249 | minD Septum site-determining protein MinD, ATPase | 1.1345 | 0.9302325581395349 | 3.2385 | 2.2271714922048997 | 1.8826010125861088 | 1.0683088937743386 | ||
CAC1251 | rodA Cell division protein, rodA/ftsW/spoVE family | 0.836 | 0.8343763037129744 | 0.6194999999999999 | 0.5408328826392644 | 0.7076772965880597 | 0.15070019765181014 | ||
CAC1254 | Fe-S oxidoreductase | 1.4529999999999998 | 1.3297872340425532 | 1.546 | 0.9925558312655088 | 1.3303357663270157 | 0.2419732501236149 | ||
CAC1255 | hypothetical protein | 0.909 | 1.366120218579235 | 1.7965 | 1.1918951132300357 | 1.3158788329523177 | 0.3716823242612801 | ||
CAC1256 | Ribonuclease G/E family protein | 1.427 | 1.0893246187363834 | 2.644 | 1.4503263234227701 | 1.6526627355397885 | 0.6811664259759995 |
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Description: | The single sheets contain the transcript amount of the genes for all four microarrays (sheet 1 to 4). The first biological experiment will be represented by the 1. and 2. array. The 3. and 4. array showed the transcript level of the second biological experiment. The 1. and 3. array the cDNA of pH 4.5 was labeled by Cy3 and pH 5.7 by Cy5, respectively. The 2. and 4. array contained the transcript level of the dyeflip (pH 4.5 Cy5 / pH 5.7 Cy3). Furthermore, the 1. and 2. array were evaluated under high scanning conditions and the 3. and 4. array under low scanning conditions. | ||||||||
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1. Array (high Scan) | pH 4.5 / Cy3 | ||||||||
ORF | Name | (F 635 median - B635) - B635 SD | (F 532 median - B532) - B532 SD | pH 5.7 / Cy5 | |||||
CA_P0002 | Transglutaminase-like predicted protease domain fused ChW-repeats and cell-adhesion domain | 373.5 | 279 | ||||||
CA_P0003 | Transglutaminase-like predicted protease domain fused to ChW-repeats and cell-adhesion domain | 266 | 109 | ||||||
CA_P0004 | Cysteine protease | 415.5 | 20426.5 | ||||||
CA_P0005 | Uncharacterized protein similar to Bacteriocin immunity protein of mesC/lccI/entI family | 340.5 | 101.5 | ||||||
CA_P0006 | GntR family HTH transcriptional regulator | 1748.5 | 1721 | ||||||
CA_P0007 | hypothetical protein | 1246 | 1028 | ||||||
CA_P0009 | Response regulator (CheY + HTH domains) | 445 | 1880 | ||||||
CA_P0010 | bgla Beta_glucosidase | 660 | 2242.5 | ||||||
CA_P0012 | pedb Pediocin immunity protein, PedB | 3038 | 3942 | ||||||
CA_P0013 | FAD dependent dehydrogenase | 1007.5 | 603 | ||||||
CA_P0014 | Protein tyrosine phosphatase II superfamily protein | 1855 | 1464.5 | ||||||
CA_P0015 | GLPQ related phosphodiesterase | 3905.5 | 3969 | ||||||
CA_P0018 | hypothetical protein | 63 | 32 | ||||||
CA_P0019 | grkc Spore germination protein, GRKC | 129 | 127.5 | ||||||
CA_P0020 | grka Spore germination protein, GRKA | 168 | 213.5 | ||||||
CA_P0024 | MarR family HTH transcriptional regulator | 95 | 81 | ||||||
CA_P0025 | pdc Pyruvate decarboxylase | 5988 | 5220.5 | ||||||
CA_P0026 | hypothetical protein | 5853.5 | 5351 | ||||||
CA_P0027 | Predicted amino acid permeases | 235.5 | 219.5 | ||||||
CA_P0028 | HTH transcriptional regulator TetR family | 657 | 496 | ||||||
CA_P0031 | hlyU Transcriptional activator HLYU, HTH of ArsR family | 458.5 | 346 | ||||||
CA_P0032 | Rhodanese-like domain | 257.5 | 247 | ||||||
CA_P0033 | hypothetical protein | 411.5 | 417.5 | ||||||
CA_P0034 | Rhodanese-like domain | 2115 | 2481 | ||||||
CA_P0035 | adhe Aldehyde-alcohol dehydrogenase, ADHE1 | 2648.5 | 850.5 | ||||||
CA_P0036 | Uncharacterized, ortholog of YgaT gene of B,subtillis | 46107.5 | 445 | ||||||
CA_P0037 | Uncharacterized, ortholog of YgaS gene of B,subtillis | 46444.5 | 354.5 | ||||||
CA_P0038 | Uncharacterized conserved protein, YCII family | 988.5 | 178.5 | ||||||
CA_P0040 | Xre family DNA-binding domain and TPR repeats containing protein | 403 | 1927.5 | ||||||
CA_P0044 | hypothetical protein | 208 | 1194.5 | ||||||
CA_P0045 | Glycosyl transferase | 356.5 | 1915 | ||||||
CA_P0046 | TetR family HTH transcriptional regulator | 78 | 135 | ||||||
CA_P0047 | Sulphohydrolase/Glycosulfatase, Zn-dependent hydrolase | 107 | 70 | ||||||
CA_P0048 | Related to methyl-accepting chemotaxis protein | 1133.5 | 688.5 | ||||||
CA_P0049 | Permease, MDR related | 166 | 147 | ||||||
CA_P0050 | pnba Para-nitrobenzyl esterase, a/b hydrolase | 1928.5 | 1907 | ||||||
CA_P0052 | MarR family HTH transcriptional regulator | 473.5 | 317 | ||||||
CA_P0053 | xynb Xylanase, glycosyl hydrolase family 10 | 311.5 | 5611 | ||||||
CA_P0054 | Xylanase/chitin deacetylase family enzyme | 439 | 7819.5 | ||||||
CA_P0055 | hypothetical protein | 294.5 | 241 | ||||||
CA_P0056 | pell Pectate lyase, secreted, polysaccharide lyase family | 434 | 4597 | ||||||
CA_P0057 | Putative glycoportein or S-layer protein | 684.5 | 1091.5 | ||||||
CA_P0058 | Rare lipoprotein A RLPA releated protein | 11422 | 9077.5 | ||||||
CA_P0059 | Alcohol dehydrogenase | 1053 | 982 | ||||||
CA_P0062 | Hypothetical protein, CF-18 family | 138.5 | 69 | ||||||
CA_P0064 | alf Fructose-bisphosphate aldolase class I | 85.5 | 76 | ||||||
CA_P0065 | Predicted secreted metalloprotease | 310 | 4875 | ||||||
CA_P0066 | ptna Mannose-specific phosphotransferase system component IIAB | 104.5 | 15 | ||||||
CA_P0067 | manY/levF Mannose/fructose-specific phosphotransferase system component IIC | 204 | 52 | ||||||
CA_P0072 | hypothetical protein | 5976.5 | 2992.5 | ||||||
CA_P0073 | ABC ATPase containing transporter | 2071.5 | 725 | ||||||
CA_P0074 | hypothetical protein | 1774 | 546 | ||||||
CA_P0076 | penicillin binding protein 1A | 928 | 564.5 | ||||||
CA_P0077 | Uncharacterized Fe-S protein | 142.5 | 71.5 | ||||||
CA_P0079 | thlr ThlR, HTH transcriptional regulator TetR/AcrR family | 2049.5 | 1822.5 | ||||||
CA_P0080 | Site-Specific Recombinase, Xerd | 292.5 | 297.5 | ||||||
CA_P0081 | TnpR resolvase C-terminal fragment | 224 | 161.5 | ||||||
CA_P0082 | crp CRP (cyclic AMP receptor protein) regulatory protein | 722.5 | 711.5 | ||||||
CA_P0083 | SAM-dependent methyltransferase | 1307.5 | 605 | ||||||
CA_P0084 | hypothetical protein | 1124 | 831 | ||||||
CA_P0085 | Hypothetical secreted protein (fragment) | 631.5 | 489 | ||||||
CA_P0086 | Permease, MDR related, probably tetracycline resistance protein | 635.5 | 606.5 | ||||||
CA_P0087 | HTH transcriptional regulator TetR/AcrR family | 3898.5 | 2437.5 | ||||||
CA_P0088 | abf 3-oxoacyl-acyl-carrier protein synthase | 1694 | 1179.5 | ||||||
CA_P0089 | Predicted membrane protein | 158 | 86 | ||||||
CA_P0090 | ABC-type transporter, ATPase component | 330 | 239 | ||||||
CA_P0091 | Predicted regulator of stationary/sporulation gene expression | 1641.5 | 1946 | ||||||
CA_P0093 | tnpa TnpA, transposase (3' segment) | 427.5 | 420.5 | ||||||
CA_P0094 | TnpA, transposase (5' segment) | 589.5 | 522.5 | ||||||
CA_P0096 | ipyr Inorganic pyrophosphatase | 820.5 | 1010.5 | ||||||
CA_P0097 | lipg Carboxyl esterase, a/b hydrolase | 2128 | 2506 | ||||||
CA_P0098 | amyA alpha-amylase | 295.5 | 261.5 | ||||||
CA_P0099 | muts DNA mismatch repair protein, MUTS fragment | 234 | 182.5 | ||||||
CA_P0100 | HTH transcriptional regulator TetR/AcrR family | 638 | 838 | ||||||
CA_P0101 | hypothetical protein | 742 | 1077.5 | ||||||
CA_P0102 | Membrane protein | 891.5 | 8260.5 | ||||||
CA_P0103 | arsr Transcriptional regulator HTH-type, ArsR family | 426 | 516 | ||||||
CA_P0104 | arsb Heavy metal resistance membrane protein | 212 | 334 | ||||||
CA_P0105 | arsc Arsenate reductase, arsC, protein-tyrosine-phosphatase family enzyme | 259 | 556 | ||||||
CA_P0107 | HTH transcriptional regulator MerR family | 301.5 | 233.5 | ||||||
CA_P0108 | Predicted HTH containing transcriptional regulator | 861 | 780 | ||||||
CA_P0110 | NH2-acetyltransferase | 372.5 | 235 | ||||||
CA_P0111 | NH2-acetyltransferase | 167 | 37 | ||||||
CA_P0112 | hypothetical protein | 3320.5 | 12481.5 | ||||||
CA_P0113 | Solo B3/4 domain (OB-fold DNA/RNA-binding) of Phe-aaRS-beta | 3682 | 3518.5 | ||||||
CA_P0114 | Possible beta-xylosidase, family 43 of glycosyl hydrolases | 97 | 252.5 | ||||||
CA_P0115 | xynD Endo-1,4-beta-xylanase XynD B,subtilis ortholog (family 43 glycosyl hydrolase and cellulose-binding domain) | 3 | 99 | ||||||
CA_P0116 | Xylanase, glycosyl hydrolase family 10 | 253.5 | 1616 | ||||||
CA_P0117 | Possible beta-xylosidase diverged, family 5/39 of glycosyl hydrolases and alpha-amylase C (Greek key) C-terminal domain | 181.5 | 1570.5 | ||||||
CA_P0118 | Possible xylan degradation enzyme (glycosyl hydrolase family 30-like domain and Ricin B-like domain) | 194 | 1459 | ||||||
CA_P0119 | Possible xylan degradation enzyme (glycosyl hydrolase family 30-like domain and Ricin B-like domain) | 78 | 1033.5 | ||||||
CA_P0120 | Possible xylan degradation enzyme (glycosyl hydrolase family 43-like domain, cellulose-binding domain and Ricin B-like domain) | 96 | 1150.5 | ||||||
CA_P0121 | Leu-rich protein family protein, YaeG (E,coli) homolog | 23 | 67 | ||||||
CA_P0123 | hypothetical protein | 597.5 | 758.5 | ||||||
CA_P0124 | Permease, MDR related, probably tetracycline resistance protein | 1910 | 2061.5 | ||||||
CA_P0125 | hypothetical protein | 1040 | 703.5 | ||||||
CA_P0126 | Uncharacterized protein (NN,term domain homologous to B,subtilis (gi|833839) | 2070 | 1554 | ||||||
CA_P0127 | HTH transcriptional regulator TetR family | 393 | 205 |
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2. array (high scan) | pH 4.5 / Cy5 | ||||||||||
ORF | Name | (F 635 median - B635) - B635 SD | (F 532 median - B532) - B532 SD | pH 5.7 / Cy3 | |||||||
CA_P0001 | Oxidoreductase | 89 | 117 | ||||||||
CA_P0002 | Transglutaminase-like predicted protease domain fused ChW-repeats and cell-adhesion domain | 279 | 286 | ||||||||
CA_P0003 | Transglutaminase-like predicted protease domain fused to ChW-repeats and cell-adhesion domain | 155.5 | 237.5 | ||||||||
CA_P0004 | Cysteine protease | 16476 | 271 | ||||||||
CA_P0005 | Uncharacterized protein similar to Bacteriocin immunity protein of mesC/lccI/entI family | 162.5 | 229.5 | ||||||||
CA_P0006 | GntR family HTH transcriptional regulator | 1599 | 1544 | ||||||||
CA_P0007 | hypothetical protein | 957.5 | 1054 | ||||||||
CA_P0009 | Response regulator (CheY + HTH domains) | 3064 | 814.5 | ||||||||
CA_P0010 | bgla Beta_glucosidase | 2148.5 | 642.5 | ||||||||
CA_P0012 | pedb Pediocin immunity protein, PedB | 3817.5 | 2461.5 | ||||||||
CA_P0013 | FAD dependent dehydrogenase | 664 | 744.5 | ||||||||
CA_P0014 | Protein tyrosine phosphatase II superfamily protein | 1588 | 1583.5 | ||||||||
CA_P0015 | GLPQ related phosphodiesterase | 3664 | 3275 | ||||||||
CA_P0019 | grkc Spore germination protein, GRKC | 116 | 94 | ||||||||
CA_P0020 | grka Spore germination protein, GRKA | 201 | 85 | ||||||||
CA_P0021 | hypothetical protein | 19 | 32 | ||||||||
CA_P0023 | hypothetical protein | 44 | 49 | ||||||||
CA_P0024 | MarR family HTH transcriptional regulator | 106.5 | 118 | ||||||||
CA_P0025 | pdc Pyruvate decarboxylase | 5205.5 | 5797 | ||||||||
CA_P0026 | hypothetical protein | 5122 | 5912 | ||||||||
CA_P0027 | Predicted amino acid permeases | 206.5 | 114.5 | ||||||||
CA_P0028 | HTH transcriptional regulator TetR family | 468 | 431.5 | ||||||||
CA_P0031 | hlyU Transcriptional activator HLYU, HTH of ArsR family | 406.5 | 375 | ||||||||
CA_P0032 | Rhodanese-like domain | 228.5 | 167.5 | ||||||||
CA_P0033 | hypothetical protein | 399.5 | 297 | ||||||||
CA_P0034 | Rhodanese-like domain | 2499 | 1767.5 | ||||||||
CA_P0035 | adhe Aldehyde-alcohol dehydrogenase, ADHE1 | 814.5 | 2786.5 | ||||||||
CA_P0036 | Uncharacterized, ortholog of YgaT gene of B,subtillis | 3232.5 | 60284.5 | ||||||||
CA_P0037 | Uncharacterized, ortholog of YgaS gene of B,subtillis | 1103.5 | 61929.5 | ||||||||
CA_P0038 | Uncharacterized conserved protein, YCII family | 171.5 | 622 | ||||||||
CA_P0040 | Xre family DNA-binding domain and TPR repeats containing protein | 1605.5 | 255 | ||||||||
CA_P0044 | hypothetical protein | 1393 | 187 | ||||||||
CA_P0045 | Glycosyl transferase | 1757 | 261.5 | ||||||||
CA_P0046 | TetR family HTH transcriptional regulator | 157 | 7 | ||||||||
CA_P0047 | Sulphohydrolase/Glycosulfatase, Zn-dependent hydrolase | 107 | 76.5 | ||||||||
CA_P0048 | Related to methyl-accepting chemotaxis protein | 601 | 1031.5 | ||||||||
CA_P0049 | Permease, MDR related | 211.5 | 152.5 | ||||||||
CA_P0050 | pnba Para-nitrobenzyl esterase, a/b hydrolase | 2205 | 2468 | ||||||||
CA_P0051 | Oxidoreductase | 98.5 | 62.5 | ||||||||
CA_P0052 | MarR family HTH transcriptional regulator | 259.5 | 354 | ||||||||
CA_P0053 | xynb Xylanase, glycosyl hydrolase family 10 | 4608.5 | 241.5 | ||||||||
CA_P0054 | Xylanase/chitin deacetylase family enzyme | 6967 | 350 | ||||||||
CA_P0055 | hypothetical protein | 249 | 196 | ||||||||
CA_P0056 | pell Pectate lyase, secreted, polysaccharide lyase family | 4865 | 396 | ||||||||
CA_P0057 | Putative glycoportein or S-layer protein | 1320.5 | 688 | ||||||||
CA_P0058 | Rare lipoprotein A RLPA releated protein | 8917 | 10583 | ||||||||
CA_P0059 | Alcohol dehydrogenase | 837 | 775.5 | ||||||||
CA_P0062 | Hypothetical protein, CF-18 family | 151 | 123.5 | ||||||||
CA_P0064 | alf Fructose-bisphosphate aldolase class I | 124 | 32.5 | ||||||||
CA_P0065 | Predicted secreted metalloprotease | 4264.5 | 229.5 | ||||||||
CA_P0066 | ptna Mannose-specific phosphotransferase system component IIAB | 38 | 51 | ||||||||
CA_P0067 | manY/levF Mannose/fructose-specific phosphotransferase system component IIC | 69.5 | 159.5 | ||||||||
CA_P0072 | hypothetical protein | 2581 | 5461.5 | ||||||||
CA_P0073 | ABC ATPase containing transporter | 701 | 1729.5 | ||||||||
CA_P0074 | hypothetical protein | 599.5 | 1349 | ||||||||
CA_P0076 | penicillin binding protein 1A | 530.5 | 935.5 | ||||||||
CA_P0078 | thil Acetyl coenzyme A acetyltransferase (thiolase) | 259.5 | 283.5 | ||||||||
CA_P0079 | thlr ThlR, HTH transcriptional regulator TetR/AcrR family | 1417.5 | 1399.5 | ||||||||
CA_P0080 | Site-Specific Recombinase, Xerd | 300 | 254 | ||||||||
CA_P0081 | TnpR resolvase C-terminal fragment | 136 | 109 | ||||||||
CA_P0082 | crp CRP (cyclic AMP receptor protein) regulatory protein | 740.5 | 617.5 | ||||||||
CA_P0083 | SAM-dependent methyltransferase | 708.5 | 1280.5 | ||||||||
CA_P0084 | hypothetical protein | 887.5 | 1064 | ||||||||
CA_P0085 | Hypothetical secreted protein (fragment) | 474.5 | 507 | ||||||||
CA_P0086 | Permease, MDR related, probably tetracycline resistance protein | 605.5 | 584 | ||||||||
CA_P0087 | HTH transcriptional regulator TetR/AcrR family | 2460 | 3028.5 | ||||||||
CA_P0088 | abf 3-oxoacyl-acyl-carrier protein synthase | 1536.5 | 1659.5 | ||||||||
CA_P0089 | Predicted membrane protein | 134 | 123 | ||||||||
CA_P0090 | ABC-type transporter, ATPase component | 167.5 | 214.5 | ||||||||
CA_P0091 | Predicted regulator of stationary/sporulation gene expression | 2159 | 1306 | ||||||||
CA_P0093 | tnpa TnpA, transposase (3' segment) | 385.5 | 425.5 | ||||||||
CA_P0094 | TnpA, transposase (5' segment) | 464.5 | 407.5 | ||||||||
CA_P0096 | ipyr Inorganic pyrophosphatase | 959 | 746 | ||||||||
CA_P0097 | lipg Carboxyl esterase, a/b hydrolase | 2062.5 | 1594 | ||||||||
CA_P0098 | amyA alpha-amylase | 297 | 309 | ||||||||
CA_P0099 | muts DNA mismatch repair protein, MUTS fragment | 211 | 148 | ||||||||
CA_P0100 | HTH transcriptional regulator TetR/AcrR family | 942 | 583 | ||||||||
CA_P0101 | hypothetical protein | 1041.5 | 599.5 | ||||||||
CA_P0102 | Membrane protein | 8135.5 | 733 | ||||||||
CA_P0103 | arsr Transcriptional regulator HTH-type, ArsR family | 587 | 263.5 | ||||||||
CA_P0104 | arsb Heavy metal resistance membrane protein | 468.5 | 269 | ||||||||
CA_P0105 | arsc Arsenate reductase, arsC, protein-tyrosine-phosphatase family enzyme | 463 | 214 | ||||||||
CA_P0106 | dxs 1-deoxyxylulose-5-phosphate synthase, dehydrogenase | 107 | 109 | ||||||||
CA_P0108 | Predicted HTH containing transcriptional regulator | 782.5 | 600 | ||||||||
CA_P0110 | NH2-acetyltransferase | 226 | 274 | ||||||||
CA_P0111 | NH2-acetyltransferase | 52 | 152 | ||||||||
CA_P0112 | hypothetical protein | 11961.5 | 2907 | ||||||||
CA_P0113 | Solo B3/4 domain (OB-fold DNA/RNA-binding) of Phe-aaRS-beta | 3998.5 | 2880.5 | ||||||||
CA_P0114 | Possible beta-xylosidase, family 43 of glycosyl hydrolases | 293.5 | 65 | ||||||||
CA_P0116 | Xylanase, glycosyl hydrolase family 10 | 2110.5 | 306 | ||||||||
CA_P0117 | Possible beta-xylosidase diverged, family 5/39 of glycosyl hydrolases and alpha-amylase C (Greek key) C-terminal domain | 1687 | 154 | ||||||||
CA_P0118 | Possible xylan degradation enzyme (glycosyl hydrolase family 30-like domain and Ricin B-like domain) | 1520 | 203 | ||||||||
CA_P0119 | Possible xylan degradation enzyme (glycosyl hydrolase family 30-like domain and Ricin B-like domain) | 797.5 | 16 | ||||||||
CA_P0120 | Possible xylan degradation enzyme (glycosyl hydrolase family 43-like domain, cellulose-binding domain and Ricin B-like domain) | 1005 | 35 | ||||||||
CA_P0122 | dTDP-4-keto-L-rhamnose reductase | 11 | 20 | ||||||||
CA_P0123 | hypothetical protein | 833 | 555.5 | ||||||||
CA_P0124 | Permease, MDR related, probably tetracycline resistance protein | 2063.5 | 1624 | ||||||||
CA_P0125 | hypothetical protein | 693.5 | 846.5 |
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3. array (low scan) | pH 4.5 / Cy3 | ||||||||
ORF | Name | (F 635 median - B635) - B635 SD | (F 532 median - B532) - B532 SD | pH 5.7 / Cy5 | |||||
CA_P0002 | Transglutaminase-like predicted protease domain fused ChW-repeats and cell-adhesion domain | 106.5 | 14.5 | ||||||
CA_P0003 | Transglutaminase-like predicted protease domain fused to ChW-repeats and cell-adhesion domain | 64 | 10 | ||||||
CA_P0004 | Cysteine protease | 167.5 | 4352 | ||||||
CA_P0005 | Uncharacterized protein similar to Bacteriocin immunity protein of mesC/lccI/entI family | 50 | 62.5 | ||||||
CA_P0006 | GntR family HTH transcriptional regulator | 326.5 | 314 | ||||||
CA_P0007 | hypothetical protein | 523.5 | 311 | ||||||
CA_P0009 | Response regulator (CheY + HTH domains) | 197 | 376 | ||||||
CA_P0010 | bgla Beta_glucosidase | 181 | 522.5 | ||||||
CA_P0012 | pedb Pediocin immunity protein, PedB | 1352.5 | 1527.5 | ||||||
CA_P0013 | FAD dependent dehydrogenase | 232.5 | 107.5 | ||||||
CA_P0014 | Protein tyrosine phosphatase II superfamily protein | 534 | 238.5 | ||||||
CA_P0015 | GLPQ related phosphodiesterase | 725.5 | 1011.5 | ||||||
CA_P0018 | hypothetical protein | 9 | 7 | ||||||
CA_P0019 | grkc Spore germination protein, GRKC | 22.5 | 27.5 | ||||||
CA_P0020 | grka Spore germination protein, GRKA | 52 | 85.5 | ||||||
CA_P0025 | pdc Pyruvate decarboxylase | 1341 | 601.5 | ||||||
CA_P0026 | hypothetical protein | 1107 | 650 | ||||||
CA_P0027 | Predicted amino acid permeases | 20.5 | 54 | ||||||
CA_P0028 | HTH transcriptional regulator TetR family | 130 | 41 | ||||||
CA_P0031 | hlyU Transcriptional activator HLYU, HTH of ArsR family | 107 | 77.5 | ||||||
CA_P0032 | Rhodanese-like domain | 42.5 | 10.5 | ||||||
CA_P0033 | hypothetical protein | 105 | 71 | ||||||
CA_P0034 | Rhodanese-like domain | 519 | 591 | ||||||
CA_P0035 | adhe Aldehyde-alcohol dehydrogenase, ADHE1 | 324 | 81 | ||||||
CA_P0036 | Uncharacterized, ortholog of YgaT gene of B.subtillis | 36982.5 | 101.5 | ||||||
CA_P0037 | Uncharacterized, ortholog of YgaS gene of B.subtillis | 27184.5 | 32 | ||||||
CA_P0038 | Uncharacterized conserved protein, YCII family | 153.5 | 22 | ||||||
CA_P0044 | hypothetical protein | 76.5 | 268.5 | ||||||
CA_P0045 | Glycosyl transferase | 84 | 377 | ||||||
CA_P0046 | TetR family HTH transcriptional regulator | 10 | 25 | ||||||
CA_P0047 | Sulphohydrolase/Glycosulfatase, Zn-dependent hydrolase | 31 | 19 | ||||||
CA_P0048 | Related to methyl-accepting chemotaxis protein | 248 | 125.5 | ||||||
CA_P0049 | Permease, MDR related | 33.5 | 69.5 | ||||||
CA_P0050 | pnba Para-nitrobenzyl esterase, a/b hydrolase | 471 | 327.5 | ||||||
CA_P0051 | Oxidoreductase | 37 | 32.5 | ||||||
CA_P0052 | MarR family HTH transcriptional regulator | 28 | 42 | ||||||
CA_P0053 | xynb Xylanase, glycosyl hydrolase family 10 | 102.5 | 2182 | ||||||
CA_P0054 | Xylanase/chitin deacetylase family enzyme | 150 | 2618.5 | ||||||
CA_P0055 | hypothetical protein | 102 | 218.5 | ||||||
CA_P0056 | pell Pectate lyase, secreted, polysaccharide lyase family | 140 | 904 | ||||||
CA_P0057 | Putative glycoportein or S-layer protein | 554.5 | 373.5 | ||||||
CA_P0058 | Rare lipoprotein A RLPA releated protein | 2633.5 | 1793.5 | ||||||
CA_P0059 | Alcohol dehydrogenase | 181.5 | 176 | ||||||
CA_P0061 | hypothetical protein | 18 | 11 | ||||||
CA_P0062 | Hypothetical protein, CF-18 family | 42 | 7.5 | ||||||
CA_P0065 | Predicted secreted metalloprotease | 112.5 | 1834.5 | ||||||
CA_P0066 | ptna Mannose-specific phosphotransferase system component IIAB | 46 | 6 | ||||||
CA_P0067 | manY/levF Mannose/fructose-specific phosphotransferase system component IIC | 40.5 | 7 | ||||||
CA_P0070 | HAD phosphatase superfamily protein | 5 | 16 | ||||||
CA_P0072 | hypothetical protein | 2495 | 384.5 | ||||||
CA_P0073 | ABC ATPase containing transporter | 1289.5 | 145 | ||||||
CA_P0074 | hypothetical protein | 1090.5 | 105.5 | ||||||
CA_P0076 | penicillin binding protein 1A | 320 | 106 | ||||||
CA_P0077 | Uncharacterized Fe-S protein | 4 | 2 | ||||||
CA_P0078 | thil Acetyl coenzyme A acetyltransferase (thiolase) | 66.5 | 29.5 | ||||||
CA_P0079 | thlr ThlR, HTH transcriptional regulator TetR/AcrR family | 267 | 76.5 | ||||||
CA_P0080 | Site-Specific Recombinase, Xerd | 67 | 52.5 | ||||||
CA_P0082 | crp CRP (cyclic AMP receptor protein) regulatory protein | 122.5 | 188 | ||||||
CA_P0083 | SAM-dependent methyltransferase | 365 | 90.5 | ||||||
CA_P0084 | hypothetical protein | 260 | 168.5 | ||||||
CA_P0085 | Hypothetical secreted protein (fragment) | 138.5 | 105 | ||||||
CA_P0086 | Permease, MDR related, probably tetracycline resistance protein | 296.5 | 203.5 | ||||||
CA_P0087 | HTH transcriptional regulator TetR/AcrR family | 853.5 | 930 | ||||||
CA_P0088 | abf 3-oxoacyl-acyl-carrier protein synthase | 941.5 | 1379.5 | ||||||
CA_P0089 | Predicted membrane protein | 36.5 | 80.5 | ||||||
CA_P0090 | ABC-type transporter, ATPase component | 66 | 128.5 | ||||||
CA_P0091 | Predicted regulator of stationary/sporulation gene expression | 257.5 | 291.5 | ||||||
CA_P0093 | tnpa TnpA, transposase (3' segment) | 98.5 | 66.5 | ||||||
CA_P0094 | TnpA, transposase (5' segment) | 104.5 | 29 | ||||||
CA_P0096 | ipyr Inorganic pyrophosphatase | 204 | 129 | ||||||
CA_P0097 | lipg Carboxyl esterase, a/b hydrolase | 671.5 | 391 | ||||||
CA_P0098 | amyA alpha-amylase | 81 | 36.5 | ||||||
CA_P0099 | muts DNA mismatch repair protein, MUTS fragment | 11 | 11 | ||||||
CA_P0100 | HTH transcriptional regulator TetR/AcrR family | 85 | 189.5 | ||||||
CA_P0101 | hypothetical protein | 58.5 | 158.5 | ||||||
CA_P0102 | Membrane protein | 197.5 | 1702 | ||||||
CA_P0103 | arsr Transcriptional regulator HTH-type, ArsR family | 68.5 | 77.5 | ||||||
CA_P0104 | arsb Heavy metal resistance membrane protein | 72.5 | 117.5 | ||||||
CA_P0105 | arsc Arsenate reductase, arsC, protein-tyrosine-phosphatase family enzyme | 81 | 195 | ||||||
CA_P0106 | dxs 1-deoxyxylulose-5-phosphate synthase, dehydrogenase | 27 | 15 | ||||||
CA_P0107 | HTH transcriptional regulator MerR family | 50 | 36.5 | ||||||
CA_P0108 | Predicted HTH containing transcriptional regulator | 111 | 105.5 | ||||||
CA_P0110 | NH2-acetyltransferase | 52.5 | 66.5 | ||||||
CA_P0111 | NH2-acetyltransferase | 15 | 23.5 | ||||||
CA_P0112 | hypothetical protein | 838.5 | 4584.5 | ||||||
CA_P0113 | Solo B3/4 domain (OB-fold DNA/RNA-binding) of Phe-aaRS-beta | 990.5 | 461.5 | ||||||
CA_P0114 | Possible beta-xylosidase, family 43 of glycosyl hydrolases | 36 | 37.5 | ||||||
CA_P0116 | Xylanase, glycosyl hydrolase family 10 | 59 | 217 | ||||||
CA_P0117 | Possible beta-xylosidase diverged, family 5/39 of glycosyl hydrolases and alpha-amylase C (Greek key) C-terminal domain | 55 | 251.5 | ||||||
CA_P0118 | Possible xylan degradation enzyme (glycosyl hydrolase family 30-like domain and Ricin B-like domain) | 38 | 244 | ||||||
CA_P0119 | Possible xylan degradation enzyme (glycosyl hydrolase family 30-like domain and Ricin B-like domain) | 24.5 | 189.5 | ||||||
CA_P0120 | Possible xylan degradation enzyme (glycosyl hydrolase family 43-like domain, cellulose-binding domain and Ricin B-like domain) | 28 | 211.5 | ||||||
CA_P0121 | Leu-rich protein family protein, YaeG (E.coli) homolog | 1 | 7 | ||||||
CA_P0123 | hypothetical protein | 127.5 | 96 | ||||||
CA_P0124 | Permease, MDR related, probably tetracycline resistance protein | 507 | 909.5 | ||||||
CA_P0125 | hypothetical protein | 223 | 119 | ||||||
CA_P0126 | Uncharacterized protein (NN.term domain homologous to B.subtilis (gi|833839) | 271 | 159 | ||||||
CA_P0127 | HTH transcriptional regulator TetR family | 62 | 29 |
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4. array (low scan) | pH 4.5 / Cy5 | ||||||||
ORF | Name | (F 635 median - B635) - B635 SD | (F 532 median - B532) - B532 SD | pH 5.7 / Cy3 | |||||
CA_P0002 | Transglutaminase-like predicted protease domain fused ChW-repeats and cell-adhesion domain | 16.5 | 45 | ||||||
CA_P0003 | Transglutaminase-like predicted protease domain fused to ChW-repeats and cell-adhesion domain | 8.5 | 28.5 | ||||||
CA_P0004 | Cysteine protease | 3907 | 131.5 | ||||||
CA_P0005 | Uncharacterized protein similar to Bacteriocin immunity protein of mesC/lccI/entI family | 102 | 33 | ||||||
CA_P0006 | GntR family HTH transcriptional regulator | 269.5 | 312 | ||||||
CA_P0007 | hypothetical protein | 159.5 | 180 | ||||||
CA_P0009 | Response regulator (CheY + HTH domains) | 596 | 133.5 | ||||||
CA_P0010 | bgla Beta_glucosidase | 508.5 | 160 | ||||||
CA_P0012 | pedb Pediocin immunity protein, PedB | 2200 | 842 | ||||||
CA_P0013 | FAD dependent dehydrogenase | 190.5 | 138 | ||||||
CA_P0014 | Protein tyrosine phosphatase II superfamily protein | 389.5 | 371.5 | ||||||
CA_P0015 | GLPQ related phosphodiesterase | 1249.5 | 475.5 | ||||||
CA_P0017 | grkb1 Spore germination protein, GRKB | 10 | 3 | ||||||
CA_P0019 | grkc Spore germination protein, GRKC | 43.5 | 12 | ||||||
CA_P0020 | grka Spore germination protein, GRKA | 88 | 31.5 | ||||||
CA_P0021 | hypothetical protein | 13 | 7 | ||||||
CA_P0023 | hypothetical protein | 3 | 12 | ||||||
CA_P0025 | pdc Pyruvate decarboxylase | 788.5 | 1078.5 | ||||||
CA_P0026 | hypothetical protein | 602 | 485 | ||||||
CA_P0027 | Predicted amino acid permeases | 61 | 28.5 | ||||||
CA_P0028 | HTH transcriptional regulator TetR family | 83 | 92 | ||||||
CA_P0031 | hlyU Transcriptional activator HLYU, HTH of ArsR family | 80.5 | 69 | ||||||
CA_P0032 | Rhodanese-like domain | 21 | 17 | ||||||
CA_P0033 | hypothetical protein | 87.5 | 59 | ||||||
CA_P0034 | Rhodanese-like domain | 636 | 396.5 | ||||||
CA_P0035 | adhe Aldehyde-alcohol dehydrogenase, ADHE1 | 87 | 243 | ||||||
CA_P0036 | Uncharacterized, ortholog of YgaT gene of B.subtillis | 258 | 54827.5 | ||||||
CA_P0037 | Uncharacterized, ortholog of YgaS gene of B.subtillis | 76 | 28223 | ||||||
CA_P0038 | Uncharacterized conserved protein, YCII family | 30.5 | 108.5 | ||||||
CA_P0040 | Xre family DNA-binding domain and TPR repeats containing protein | 233 | 48 | ||||||
CA_P0044 | hypothetical protein | 290 | 37.5 | ||||||
CA_P0045 | Glycosyl transferase | 329 | 25 | ||||||
CA_P0046 | TetR family HTH transcriptional regulator | 12 | 7 | ||||||
CA_P0047 | Sulphohydrolase/Glycosulfatase, Zn-dependent hydrolase | 29 | 18 | ||||||
CA_P0048 | Related to methyl-accepting chemotaxis protein | 124.5 | 173.5 | ||||||
CA_P0049 | Permease, MDR related | 120.5 | 25.5 | ||||||
CA_P0050 | pnba Para-nitrobenzyl esterase, a/b hydrolase | 338 | 427.5 | ||||||
CA_P0051 | Oxidoreductase | 38.5 | 21.5 | ||||||
CA_P0052 | MarR family HTH transcriptional regulator | 58 | 24 | ||||||
CA_P0053 | xynb Xylanase, glycosyl hydrolase family 10 | 1977.5 | 82.5 | ||||||
CA_P0054 | Xylanase/chitin deacetylase family enzyme | 3082.5 | 98 | ||||||
CA_P0055 | hypothetical protein | 221.5 | 75.5 | ||||||
CA_P0056 | pell Pectate lyase, secreted, polysaccharide lyase family | 1006 | 88.5 | ||||||
CA_P0057 | Putative glycoportein or S-layer protein | 455 | 399.5 | ||||||
CA_P0058 | Rare lipoprotein A RLPA releated protein | 1842 | 2759.5 | ||||||
CA_P0059 | Alcohol dehydrogenase | 146 | 155.5 | ||||||
CA_P0061 | hypothetical protein | 1 | 10 | ||||||
CA_P0062 | Hypothetical protein, CF-18 family | 12.5 | 22 | ||||||
CA_P0064 | alf Fructose-bisphosphate aldolase class I | 6.5 | 7 | ||||||
CA_P0065 | Predicted secreted metalloprotease | 1836 | 93 | ||||||
CA_P0066 | ptna Mannose-specific phosphotransferase system component IIAB | 2 | 21 | ||||||
CA_P0067 | manY/levF Mannose/fructose-specific phosphotransferase system component IIC | 3 | 30 | ||||||
CA_P0072 | hypothetical protein | 584 | 1204 | ||||||
CA_P0073 | ABC ATPase containing transporter | 153.5 | 339.5 | ||||||
CA_P0074 | hypothetical protein | 154.5 | 348.5 | ||||||
CA_P0076 | penicillin binding protein 1A | 119.5 | 179.5 | ||||||
CA_P0077 | Uncharacterized Fe-S protein | 3.5 | 8.5 | ||||||
CA_P0078 | thil Acetyl coenzyme A acetyltransferase (thiolase) | 31 | 76.5 | ||||||
CA_P0079 | thlr ThlR, HTH transcriptional regulator TetR/AcrR family | 122.5 | 172.5 | ||||||
CA_P0080 | Site-Specific Recombinase, Xerd | 51 | 42 | ||||||
CA_P0081 | TnpR resolvase C-terminal fragment | 22 | 24 | ||||||
CA_P0082 | crp CRP (cyclic AMP receptor protein) regulatory protein | 249 | 92 | ||||||
CA_P0083 | SAM-dependent methyltransferase | 117.5 | 286 | ||||||
CA_P0084 | hypothetical protein | 210 | 219.5 | ||||||
CA_P0085 | Hypothetical secreted protein (fragment) | 120.5 | 101.5 | ||||||
CA_P0086 | Permease, MDR related, probably tetracycline resistance protein | 223 | 257 | ||||||
CA_P0087 | HTH transcriptional regulator TetR/AcrR family | 1078.5 | 746.5 | ||||||
CA_P0088 | abf 3-oxoacyl-acyl-carrier protein synthase | 1604 | 935.5 | ||||||
CA_P0089 | Predicted membrane protein | 110 | 40 | ||||||
CA_P0090 | ABC-type transporter, ATPase component | 133 | 72 | ||||||
CA_P0091 | Predicted regulator of stationary/sporulation gene expression | 554 | 199 | ||||||
CA_P0093 | tnpa TnpA, transposase (3' segment) | 54 | 75 | ||||||
CA_P0094 | TnpA, transposase (5' segment) | 27 | 56 | ||||||
CA_P0096 | ipyr Inorganic pyrophosphatase | 155 | 138.5 | ||||||
CA_P0097 | lipg Carboxyl esterase, a/b hydrolase | 462.5 | 400 | ||||||
CA_P0098 | amyA alpha-amylase | 47 | 48.5 | ||||||
CA_P0099 | muts DNA mismatch repair protein, MUTS fragment | 24.5 | 4 | ||||||
CA_P0100 | HTH transcriptional regulator TetR/AcrR family | 163.5 | 75 | ||||||
CA_P0101 | hypothetical protein | 205 | 73.5 | ||||||
CA_P0102 | Membrane protein | 1998 | 154 | ||||||
CA_P0103 | arsr Transcriptional regulator HTH-type, ArsR family | 141 | 36 | ||||||
CA_P0104 | arsb Heavy metal resistance membrane protein | 141 | 44 | ||||||
CA_P0105 | arsc Arsenate reductase, arsC, protein-tyrosine-phosphatase family enzyme | 141 | 54 | ||||||
CA_P0106 | dxs 1-deoxyxylulose-5-phosphate synthase, dehydrogenase | 18.5 | 28 | ||||||
CA_P0107 | HTH transcriptional regulator MerR family | 51.5 | 38 | ||||||
CA_P0108 | Predicted HTH containing transcriptional regulator | 114.5 | 76 | ||||||
CA_P0110 | NH2-acetyltransferase | 56 | 42 | ||||||
CA_P0112 | hypothetical protein | 4686.5 | 784.5 | ||||||
CA_P0113 | Solo B3/4 domain (OB-fold DNA/RNA-binding) of Phe-aaRS-beta | 658 | 591.5 | ||||||
CA_P0114 | Possible beta-xylosidase, family 43 of glycosyl hydrolases | 19 | 16 | ||||||
CA_P0115 | xynD Endo-1,4-beta-xylanase XynD B.subtilis ortholog (family 43 glycosyl hydrolase and cellulose-binding domain) | 9 | 4 | ||||||
CA_P0116 | Xylanase, glycosyl hydrolase family 10 | 224.5 | 53 | ||||||
CA_P0117 | Possible beta-xylosidase diverged, family 5/39 of glycosyl hydrolases and alpha-amylase C (Greek key) C-terminal domain | 339.5 | 45 | ||||||
CA_P0118 | Possible xylan degradation enzyme (glycosyl hydrolase family 30-like domain and Ricin B-like domain) | 262.5 | 27.5 | ||||||
CA_P0119 | Possible xylan degradation enzyme (glycosyl hydrolase family 30-like domain and Ricin B-like domain) | 224 | 17 | ||||||
CA_P0120 | Possible xylan degradation enzyme (glycosyl hydrolase family 43-like domain, cellulose-binding domain and Ricin B-like domain) | 199.5 | 15 | ||||||
CA_P0123 | hypothetical protein | 102 | 79.5 | ||||||
CA_P0124 | Permease, MDR related, probably tetracycline resistance protein | 1062.5 | 421 |