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WffBiochemdataexcel
The data sources for the standa
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| &S2. The data sources for the standard chemical potentials and enthalpies of the Thermotable | |||||||||
| Source reference | Source code | reference # | |||||||
| Alberty, R. A. 2006. Biochemical Thermodynamics: Applications of Mathematica (Wiley: Hoboken, NJ). | A | ||||||||
| Burton, K. and H.A. Krebs 1953. 'The free-energy changes associated with the individual steps of the tricarboxylic acid cycle, glycolysis and alcoholic fermentation and with the hydrolysis of the pyrophosphate groups of adenosinetriphosphate.', Biochem. J. 54, 94 -107. | Bc | ||||||||
| Cox, J. D., D. D. Wagman, and M. V. Medvedev. 1989. CODATA Key Values for Thermodynamics (HemispherePublishing Corp.: New York). | C | ||||||||
| eQuilibrator: The Biochemical Thermodynamics Calculator; Beber, M. E., M. G. Gollub, D. Mozaffari, K. M. Shebek, A. I. Flamholz, R. Milo, and E. Noor. 2022. 'eQuilibrator 3.0: a database solution for thermodynamic constant estimation', Nucleic Acids Res, 50: D603-d09. | E | ||||||||
| Ferguson, J.F. and Gavis, J. (1972) A Review of the Arsenic Cycle in Nature Waters. Water Research, 6, 1259-1274. page 1262. https://doi.org/10.1016/0043-1354(72)90052-8 | F | ||||||||
| Boerio-Goates, J., M. R. Francis, R. N. Goldberg, M.A.V. Ribeiro da Silva, M.D.M.C. Ribeiro da Silva, Y.B. Tewari. 2001. 'Thermochemistry of adenosine', The Journal of Chemical Thermodynamics 33, 929-947. https://doi.org/10.1006/jcht.2001.0820. Goldberg R. and Y. Tewari. 1989. 'Thermodynamic and Transport Properties of Carbohydrates and their Monophosphates: The Pentoses and Hexoses', Journal of Physical and Chemical Reference Data 18, 809-880. DOI: 10.1063/1.555831, pp. 872-874. Goldberg, R. N. 2009. 'Thermodynamics network calculations applied to biochemical substances and reactions.' in M.G. Hicks, Kettner, C. (ed.), PROCEEDINGS OF THE 4TH BEILSTEIN ESCEC SYMPOSIUM EXPERIMENTAL STANDARD CONDITIONS OF ENZYME CHARACTERIZATION (Beilstein-Institut). | G | ||||||||
| Stull, D. and Prophet, H. (1971), JANAF thermochemical tables, second edition: National Institute of Standards and Technology, Gaithersburg, MD, [online], https://doi.org/10.6028/NBS.NSRDS.37 (Accessed July 24, 2025) | J | ||||||||
| Miller, S.L., and D. Smith-Magowan. 1990. 'The Thermodynamics of the Krebs Cycle and Related Compounds', J. Phys. Chem. Ref. Data, 19: 1049-73. | M | ||||||||
| Ould-Moulaye, C.B., C.G. Dussap, J.B. Gros. 2001. ‘A consistent set of formation properties of nucleic acid compounds.’ Thermochimica Acta, 375. 93-107. doi:10.1016/s0040-6031(01)00522-6 and Ould-Moulaye, C.B., C.G Dussap, J.B Gros. 2002. 'A consistent set of formation properties of nucleic acid compounds: Nucleosides, nucleotides and nucleotide-phosphates in aqueous solution', Thermochimica Acta 387, 1-15. https://doi.org/10.1016/S0040-6031(01)00814-0 | O | ||||||||
| Cox, J.D. and G. Pilcher. 1970. 'Thermochemistry of Organic and Organometallic Compounds'. Academic Press, London and New York 1970. | Pc | ||||||||
| Pourbaix, M. 1974. Atlas of electrochemical equilibria in aqueous solutions. Atlas d'équilibres électrochemiques. 2nd English ed. Imprint Houston, Tex.: National Association of Corrosion Engineers, 1974. sections 12.1 and 18.3. | Pou | ||||||||
| Pitzer, K.S. 1995. Thermodynamics (McGraw-Hill: New York). | Q | ||||||||
| Thauer, R. K., K. Jungermann, and K. Decker. 1977. 'Energy conservation in chemotrophic anaerobic bacteria', Bacteriol Rev, 41: 100-80. | T | ||||||||
| Robie, R.A., B.S. Hemingway, and J.R. Fisher. 1978. ' Thermodynamic properties of minerals and related substances at 298.15 K and 1 bar (105 pascals) pressure and at higher temperatures' Bulletin 1452, https://doi.org/10.3133/b1452 | U | ||||||||
| Wilhoit, R.C. 1969. 'Thermodynamic Properties of Biochemical Substances.' in H.D. Brown (ed.), Biochemical Microcalorimetry (Academic Press: New York). | Wc | ||||||||
| Wagman, D. D., W. H. Evans, V. B. Parker, R. H. Schumm, I. Halow, S. M. Bailey, K. L. Churney, and R. L. Nutall. 1982. 'The NBS Tables of Chemical Thermodynamic Properties', J. Phys. Chem. Ref. Data, 11. | Z | ||||||||
