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| UID | Name | Parent | Mutation | Species | CellLine | Protocol | Source | Type | GrowthConditions | Media | Passages | Scientist | RepositoryLink | BioSampleAccession | EthicsApproval | AssayType | StorageType | Catalog# | Link_Catalog# |
| CEL-250605SHO-1 | MCRIi019-A-WT | WildType | Homo Sapiens | MCRIi019-A | https://fairdomhub.org/sops/832 | ATCC Fibroblast line 1502 | Induced Pluripotent Stem Cells (iPSC) | Feeder-free on Matrigel-coated 6-well plates | Essential 8 (E8) medium | 1:6 every 3–4 days using 0.5 mM EDTA in PBS | Kathryn Yammine | https://hpscreg.eu/cell-line/MCRIi019-A | https://www.ebi.ac.uk/biosamples/samples/SAMEA117742037 | HREC #33118, Royal Children’s Hospital, Victoria, Australia | Frozen | CRL-1502 | https://www.atcc.org/products/crl-1502 | ||
| CEL-250605SHO-2 | MCRIi019-A-6 | CEL-250605SHO-1 | CRISPR/Cas9 editing to introduce COL2A1 c.2155C>T (p.Arg719Cys) | MCRIi019-A | https://fairdomhub.org/sops/832 | Induced Pluripotent Stem Cells (iPSC) | Feeder-free on Matrigel-coated 6-well plates | Essential 8 (E8) medium | 1:6 every 3–4 days using 0.5 mM EDTA in PBS | Kathryn Yammine | https://hpscreg.eu/cell-line/MCRIi019-A | https://www.ebi.ac.uk/biosamples/samples/SAMEA117742037 | HREC #33118, Royal Children’s Hospital, Victoria, Australia | Frozen | CRL-1502 | https://www.atcc.org/products/crl-1502 | |||
| CEL-250605SHO-3 | 403_10-Chondronoid-Arg719Cys | CEL-250605SHO-2 | https://fairdomhub.org/sops/832 | iPSC-derived chondronoid | 3D pellet culture; orbital shaking; non-adherent plates (60 rpm, 24 days) | APEL2 + 5% PFHM II + 200 µM sodium ascorbate + Pen/Strep (no FGF2 after day 20) | Kathryn Yammine | IHC | |||||||||||
| CEL-250605SHO-4 | 403_11-Chondronoid-Arg719Cys | CEL-250605SHO-2 | https://fairdomhub.org/sops/832 | iPSC-derived chondronoid | 3D pellet culture; orbital shaking; non-adherent plates (60 rpm, 24 days) | APEL2 + 5% PFHM II + 200 µM sodium ascorbate + Pen/Strep (no FGF2 after day 20) | Kathryn Yammine | IHC | |||||||||||
| CEL-250605SHO-5 | 403_12-Chondronoid-Arg719Cys | CEL-250605SHO-2 | https://fairdomhub.org/sops/832 | iPSC-derived chondronoid | 3D pellet culture; orbital shaking; non-adherent plates (60 rpm, 24 days) | APEL2 + 5% PFHM II + 200 µM sodium ascorbate + Pen/Strep (no FGF2 after day 20) | Kathryn Yammine | IHC | |||||||||||
| CEL-250605SHO-6 | 403_13-Chondronoid-Arg719Cys | CEL-250605SHO-2 | https://fairdomhub.org/sops/832 | iPSC-derived chondronoid | 3D pellet culture; orbital shaking; non-adherent plates (60 rpm, 24 days) | APEL2 + 5% PFHM II + 200 µM sodium ascorbate + Pen/Strep (no FGF2 after day 20) | Kathryn Yammine | IHC | |||||||||||
| CEL-250605SHO-7 | 403_14-Chondronoid-Arg719Cys | CEL-250605SHO-2 | https://fairdomhub.org/sops/832 | iPSC-derived chondronoid | 3D pellet culture; orbital shaking; non-adherent plates (60 rpm, 24 days) | APEL2 + 5% PFHM II + 200 µM sodium ascorbate + Pen/Strep (no FGF2 after day 20) | Kathryn Yammine | IHC | |||||||||||
| CEL-250605SHO-8 | 403_1-Chondronoid-Arg719Cys | CEL-250605SHO-2 | https://fairdomhub.org/sops/832 | iPSC-derived chondronoid | 3D pellet culture; orbital shaking; non-adherent plates (60 rpm, 24 days) | APEL2 + 5% PFHM II + 200 µM sodium ascorbate + Pen/Strep (no FGF2 after day 20) | Kathryn Yammine | IHC | |||||||||||
| CEL-250605SHO-9 | 403_2-Chondronoid-Arg719Cys | CEL-250605SHO-2 | https://fairdomhub.org/sops/832 | iPSC-derived chondronoid | 3D pellet culture; orbital shaking; non-adherent plates (60 rpm, 24 days) | APEL2 + 5% PFHM II + 200 µM sodium ascorbate + Pen/Strep (no FGF2 after day 20) | Kathryn Yammine | IHC | |||||||||||
| CEL-250605SHO-10 | 403_3-Chondronoid-Arg719Cys | CEL-250605SHO-2 | https://fairdomhub.org/sops/832 | iPSC-derived chondronoid | 3D pellet culture; orbital shaking; non-adherent plates (60 rpm, 24 days) | APEL2 + 5% PFHM II + 200 µM sodium ascorbate + Pen/Strep (no FGF2 after day 20) | Kathryn Yammine | IHC | |||||||||||
| CEL-250605SHO-11 | 403_4-Chondronoid-Arg719Cys | CEL-250605SHO-2 | https://fairdomhub.org/sops/832 | iPSC-derived chondronoid | 3D pellet culture; orbital shaking; non-adherent plates (60 rpm, 24 days) | APEL2 + 5% PFHM II + 200 µM sodium ascorbate + Pen/Strep (no FGF2 after day 20) | Kathryn Yammine | IHC | |||||||||||
| CEL-250605SHO-12 | 403_5-Chondronoid-Arg719Cys | CEL-250605SHO-2 | https://fairdomhub.org/sops/832 | iPSC-derived chondronoid | 3D pellet culture; orbital shaking; non-adherent plates (60 rpm, 24 days) | APEL2 + 5% PFHM II + 200 µM sodium ascorbate + Pen/Strep (no FGF2 after day 20) | Kathryn Yammine | IHC | |||||||||||
| CEL-250605SHO-13 | 403_6-Chondronoid-Arg719Cys | CEL-250605SHO-2 | https://fairdomhub.org/sops/832 | iPSC-derived chondronoid | 3D pellet culture; orbital shaking; non-adherent plates (60 rpm, 24 days) | APEL2 + 5% PFHM II + 200 µM sodium ascorbate + Pen/Strep (no FGF2 after day 20) | Kathryn Yammine | IHC | |||||||||||
| CEL-250605SHO-14 | 403_7-Chondronoid-Arg719Cys | CEL-250605SHO-2 | https://fairdomhub.org/sops/832 | iPSC-derived chondronoid | 3D pellet culture; orbital shaking; non-adherent plates (60 rpm, 24 days) | APEL2 + 5% PFHM II + 200 µM sodium ascorbate + Pen/Strep (no FGF2 after day 20) | Kathryn Yammine | IHC | |||||||||||
| CEL-250605SHO-15 | 403_8-Chondronoid-Arg719Cys | CEL-250605SHO-2 | https://fairdomhub.org/sops/832 | iPSC-derived chondronoid | 3D pellet culture; orbital shaking; non-adherent plates (60 rpm, 24 days) | APEL2 + 5% PFHM II + 200 µM sodium ascorbate + Pen/Strep (no FGF2 after day 20) | Kathryn Yammine | IHC | |||||||||||
| CEL-250605SHO-16 | 403_9-Chondronoid-Arg719Cys | CEL-250605SHO-2 | https://fairdomhub.org/sops/832 | iPSC-derived chondronoid | 3D pellet culture; orbital shaking; non-adherent plates (60 rpm, 24 days) | APEL2 + 5% PFHM II + 200 µM sodium ascorbate + Pen/Strep (no FGF2 after day 20) | Kathryn Yammine | IHC | |||||||||||
| CEL-250605SHO-17 | 403_15-Chondronoid-Arg719Cys | CEL-250605SHO-2 | https://fairdomhub.org/sops/832 | iPSC-derived chondronoid | 3D pellet culture; orbital shaking; non-adherent plates (60 rpm, 24 days) | APEL2 + 5% PFHM II + 200 µM sodium ascorbate + Pen/Strep (no FGF2 after day 20) | Kathryn Yammine | IHC | |||||||||||
| CEL-250605SHO-18 | 403_16-Chondronoid-Arg719Cys | CEL-250605SHO-2 | https://fairdomhub.org/sops/832 | iPSC-derived chondronoid | 3D pellet culture; orbital shaking; non-adherent plates (60 rpm, 24 days) | APEL2 + 5% PFHM II + 200 µM sodium ascorbate + Pen/Strep (no FGF2 after day 20) | Kathryn Yammine | IHC | |||||||||||
| CEL-250605SHO-19 | 403_17-Chondronoid-Arg719Cys | CEL-250605SHO-2 | https://fairdomhub.org/sops/832 | iPSC-derived chondronoid | 3D pellet culture; orbital shaking; non-adherent plates (60 rpm, 24 days) | APEL2 + 5% PFHM II + 200 µM sodium ascorbate + Pen/Strep (no FGF2 after day 20) | Kathryn Yammine | IHC | |||||||||||
| CEL-250605SHO-20 | 403_18-Chondronoid-Arg719Cys | CEL-250605SHO-2 | https://fairdomhub.org/sops/832 | iPSC-derived chondronoid | 3D pellet culture; orbital shaking; non-adherent plates (60 rpm, 24 days) | APEL2 + 5% PFHM II + 200 µM sodium ascorbate + Pen/Strep (no FGF2 after day 20) | Kathryn Yammine | IHC | |||||||||||
| CEL-250605SHO-21 | 171_1-Chondronoid-WT | CEL-250605SHO-1 | https://fairdomhub.org/sops/832 | iPSC-derived chondronoid | 3D pellet culture; orbital shaking; non-adherent plates (60 rpm, 24 days) | APEL2 + 5% PFHM II + 200 µM sodium ascorbate + Pen/Strep (no FGF2 after day 20) | Kathryn Yammine | IHC | |||||||||||
| CEL-250605SHO-22 | 171_2-Chondronoid-WT | CEL-250605SHO-1 | https://fairdomhub.org/sops/832 | iPSC-derived chondronoid | 3D pellet culture; orbital shaking; non-adherent plates (60 rpm, 24 days) | APEL2 + 5% PFHM II + 200 µM sodium ascorbate + Pen/Strep (no FGF2 after day 20) | Kathryn Yammine | IHC | |||||||||||
| CEL-250605SHO-23 | 171_3-Chondronoid-WT | CEL-250605SHO-1 | https://fairdomhub.org/sops/832 | iPSC-derived chondronoid | 3D pellet culture; orbital shaking; non-adherent plates (60 rpm, 24 days) | APEL2 + 5% PFHM II + 200 µM sodium ascorbate + Pen/Strep (no FGF2 after day 20) | Kathryn Yammine | IHC | |||||||||||
| CEL-250605SHO-24 | 171_4-Chondronoid-WT | CEL-250605SHO-1 | https://fairdomhub.org/sops/832 | iPSC-derived chondronoid | 3D pellet culture; orbital shaking; non-adherent plates (60 rpm, 24 days) | APEL2 + 5% PFHM II + 200 µM sodium ascorbate + Pen/Strep (no FGF2 after day 20) | Kathryn Yammine | IHC | |||||||||||
| CEL-250605SHO-25 | 171_5-Chondronoid-WT | CEL-250605SHO-1 | https://fairdomhub.org/sops/832 | iPSC-derived chondronoid | 3D pellet culture; orbital shaking; non-adherent plates (60 rpm, 24 days) | APEL2 + 5% PFHM II + 200 µM sodium ascorbate + Pen/Strep (no FGF2 after day 20) | Kathryn Yammine | IHC | |||||||||||
| CEL-250605SHO-26 | 171_6-Chondronoid-WT | CEL-250605SHO-1 | https://fairdomhub.org/sops/832 | iPSC-derived chondronoid | 3D pellet culture; orbital shaking; non-adherent plates (60 rpm, 24 days) | APEL2 + 5% PFHM II + 200 µM sodium ascorbate + Pen/Strep (no FGF2 after day 20) | Kathryn Yammine | IHC | |||||||||||
| CEL-250605SHO-27 | 171_7-Chondronoid-WT | CEL-250605SHO-1 | https://fairdomhub.org/sops/832 | iPSC-derived chondronoid | 3D pellet culture; orbital shaking; non-adherent plates (60 rpm, 24 days) | APEL2 + 5% PFHM II + 200 µM sodium ascorbate + Pen/Strep (no FGF2 after day 20) | Kathryn Yammine | IHC | |||||||||||
| CEL-250605SHO-28 | 171_8-Chondronoid-WT | CEL-250605SHO-1 | https://fairdomhub.org/sops/832 | iPSC-derived chondronoid | 3D pellet culture; orbital shaking; non-adherent plates (60 rpm, 24 days) | APEL2 + 5% PFHM II + 200 µM sodium ascorbate + Pen/Strep (no FGF2 after day 20) | Kathryn Yammine | IHC | |||||||||||
| CEL-250605SHO-29 | 171_9-Chondronoid-WT | CEL-250605SHO-1 | https://fairdomhub.org/sops/832 | iPSC-derived chondronoid | 3D pellet culture; orbital shaking; non-adherent plates (60 rpm, 24 days) | APEL2 + 5% PFHM II + 200 µM sodium ascorbate + Pen/Strep (no FGF2 after day 20) | Kathryn Yammine | IHC | |||||||||||
| CEL-250605SHO-30 | 755_1-Chondronoid-WT | CEL-250605SHO-1 | https://fairdomhub.org/sops/832 | iPSC-derived chondronoid | 3D pellet culture; orbital shaking; non-adherent plates (60 rpm, 24 days) | APEL2 + 5% PFHM II + 200 µM sodium ascorbate + Pen/Strep (no FGF2 after day 20) | Kathryn Yammine | IHC | |||||||||||
| CEL-250605SHO-31 | 755_2-Chondronoid-WT | CEL-250605SHO-1 | https://fairdomhub.org/sops/832 | iPSC-derived chondronoid | 3D pellet culture; orbital shaking; non-adherent plates (60 rpm, 24 days) | APEL2 + 5% PFHM II + 200 µM sodium ascorbate + Pen/Strep (no FGF2 after day 20) | Kathryn Yammine | IHC | |||||||||||
| CEL-250605SHO-32 | 755_3-Chondronoid-WT | CEL-250605SHO-1 | https://fairdomhub.org/sops/832 | iPSC-derived chondronoid | 3D pellet culture; orbital shaking; non-adherent plates (60 rpm, 24 days) | APEL2 + 5% PFHM II + 200 µM sodium ascorbate + Pen/Strep (no FGF2 after day 20) | Kathryn Yammine | IHC | |||||||||||
| CEL-250605SHO-33 | R-1-Chondronoid-Arg719Cys | CEL-250605SHO-2 | https://fairdomhub.org/sops/832 | iPSC-derived chondronoid | 3D pellet culture; orbital shaking; non-adherent plates (60 rpm, 24 days) | APEL2 + 5% PFHM II + 200 µM sodium ascorbate + Pen/Strep (no FGF2 after day 20) | Kathryn Yammine | TEM | |||||||||||
| CEL-250605SHO-34 | R-3-Chondronoid-Arg719Cys | CEL-250605SHO-2 | https://fairdomhub.org/sops/832 | iPSC-derived chondronoid | 3D pellet culture; orbital shaking; non-adherent plates (60 rpm, 24 days) | APEL2 + 5% PFHM II + 200 µM sodium ascorbate + Pen/Strep (no FGF2 after day 20) | Kathryn Yammine | TEM | |||||||||||
| CEL-250605SHO-35 | R1-Chondronoid-Arg719Cys | CEL-250605SHO-2 | https://fairdomhub.org/sops/832 | iPSC-derived chondronoid | 3D pellet culture; orbital shaking; non-adherent plates (60 rpm, 24 days) | APEL2 + 5% PFHM II + 200 µM sodium ascorbate + Pen/Strep (no FGF2 after day 20) | Kathryn Yammine | TEM | |||||||||||
| CEL-250605SHO-36 | R2-Chondronoid-Arg719Cys | CEL-250605SHO-2 | https://fairdomhub.org/sops/832 | iPSC-derived chondronoid | 3D pellet culture; orbital shaking; non-adherent plates (60 rpm, 24 days) | APEL2 + 5% PFHM II + 200 µM sodium ascorbate + Pen/Strep (no FGF2 after day 20) | Kathryn Yammine | TEM | |||||||||||
| CEL-250605SHO-37 | WT-1-Chondronoid-Arg719Cys | CEL-250605SHO-2 | https://fairdomhub.org/sops/832 | iPSC-derived chondronoid | 3D pellet culture; orbital shaking; non-adherent plates (60 rpm, 24 days) | APEL2 + 5% PFHM II + 200 µM sodium ascorbate + Pen/Strep (no FGF2 after day 20) | Kathryn Yammine | TEM | |||||||||||
| CEL-250605SHO-38 | R(080302021)-Chondronoid-Arg719Cys | CEL-250605SHO-2 | https://fairdomhub.org/sops/832 | iPSC-derived chondronoid | 3D pellet culture; orbital shaking; non-adherent plates (60 rpm, 24 days) | APEL2 + 5% PFHM II + 200 µM sodium ascorbate + Pen/Strep (no FGF2 after day 20) | Kathryn Yammine | TEM | |||||||||||
| CEL-250605SHO-39 | WT-1-Chondronoid-WT | CEL-250605SHO-1 | https://fairdomhub.org/sops/832 | iPSC-derived chondronoid | 3D pellet culture; orbital shaking; non-adherent plates (60 rpm, 24 days) | APEL2 + 5% PFHM II + 200 µM sodium ascorbate + Pen/Strep (no FGF2 after day 20) | Kathryn Yammine | TEM | |||||||||||
| CEL-250605SHO-40 | WT-2-Chondronoid-WT | CEL-250605SHO-1 | https://fairdomhub.org/sops/832 | iPSC-derived chondronoid | 3D pellet culture; orbital shaking; non-adherent plates (60 rpm, 24 days) | APEL2 + 5% PFHM II + 200 µM sodium ascorbate + Pen/Strep (no FGF2 after day 20) | Kathryn Yammine | TEM | |||||||||||
| CEL-250605SHO-41 | WT-3-Chondronoid-WT | CEL-250605SHO-1 | https://fairdomhub.org/sops/832 | iPSC-derived chondronoid | 3D pellet culture; orbital shaking; non-adherent plates (60 rpm, 24 days) | APEL2 + 5% PFHM II + 200 µM sodium ascorbate + Pen/Strep (no FGF2 after day 20) | Kathryn Yammine | TEM | |||||||||||
| CEL-250605SHO-42 | WT(08302021)-Chondronoid-WT | CEL-250605SHO-1 | https://fairdomhub.org/sops/832 | iPSC-derived chondronoid | 3D pellet culture; orbital shaking; non-adherent plates (60 rpm, 24 days) | APEL2 + 5% PFHM II + 200 µM sodium ascorbate + Pen/Strep (no FGF2 after day 20) | Kathryn Yammine | TEM | |||||||||||
| CEL-250605SHO-43 | R719C_1-1_e | CEL-250605SHO-2 | https://fairdomhub.org/sops/833 | iPSC-derived chondronoid | 3D pellet culture; orbital shaking; non-adherent plates (60 rpm, 24 days) | APEL2 + 5% PFHM II + 200 µM sodium ascorbate + Pen/Strep (no FGF2 after day 20) | Early (34 Days) | Kathryn Yammine | RNAseq | ||||||||||
| CEL-250605SHO-44 | R719C_1-2_e | CEL-250605SHO-2 | https://fairdomhub.org/sops/833 | iPSC-derived chondronoid | 3D pellet culture; orbital shaking; non-adherent plates (60 rpm, 24 days) | APEL2 + 5% PFHM II + 200 µM sodium ascorbate + Pen/Strep (no FGF2 after day 20) | Early (34 Days) | Kathryn Yammine | RNAseq | ||||||||||
| CEL-250605SHO-45 | R719C_2-1_e | CEL-250605SHO-2 | https://fairdomhub.org/sops/833 | iPSC-derived chondronoid | 3D pellet culture; orbital shaking; non-adherent plates (60 rpm, 24 days) | APEL2 + 5% PFHM II + 200 µM sodium ascorbate + Pen/Strep (no FGF2 after day 20) | Early (34 Days) | Kathryn Yammine | RNAseq | ||||||||||
| CEL-250605SHO-46 | R719C_2-2_e | CEL-250605SHO-2 | https://fairdomhub.org/sops/833 | iPSC-derived chondronoid | 3D pellet culture; orbital shaking; non-adherent plates (60 rpm, 24 days) | APEL2 + 5% PFHM II + 200 µM sodium ascorbate + Pen/Strep (no FGF2 after day 20) | Early (34 Days) | Kathryn Yammine | RNAseq | ||||||||||
| CEL-250605SHO-47 | R719C_3-1_e | CEL-250605SHO-2 | https://fairdomhub.org/sops/833 | iPSC-derived chondronoid | 3D pellet culture; orbital shaking; non-adherent plates (60 rpm, 24 days) | APEL2 + 5% PFHM II + 200 µM sodium ascorbate + Pen/Strep (no FGF2 after day 20) | Early (34 Days) | Kathryn Yammine | RNAseq | ||||||||||
| CEL-250605SHO-48 | R719C_3-2_e | CEL-250605SHO-2 | https://fairdomhub.org/sops/833 | iPSC-derived chondronoid | 3D pellet culture; orbital shaking; non-adherent plates (60 rpm, 24 days) | APEL2 + 5% PFHM II + 200 µM sodium ascorbate + Pen/Strep (no FGF2 after day 20) | Early (34 Days) | Kathryn Yammine | RNAseq | ||||||||||
| CEL-250605SHO-49 | R719C_1-1_l | CEL-250605SHO-2 | https://fairdomhub.org/sops/833 | iPSC-derived chondronoid | 3D pellet culture; orbital shaking; non-adherent plates (60 rpm, 24 days) | APEL2 + 5% PFHM II + 200 µM sodium ascorbate + Pen/Strep (no FGF2 after day 20) | Late (44 Days) | Kathryn Yammine | RNAseq | ||||||||||
| CEL-250605SHO-50 | R719C_1-2_l | CEL-250605SHO-2 | https://fairdomhub.org/sops/833 | iPSC-derived chondronoid | 3D pellet culture; orbital shaking; non-adherent plates (60 rpm, 24 days) | APEL2 + 5% PFHM II + 200 µM sodium ascorbate + Pen/Strep (no FGF2 after day 20) | Late (44 Days) | Kathryn Yammine | RNAseq | ||||||||||
| CEL-250605SHO-51 | R719C_1-3_l | CEL-250605SHO-2 | https://fairdomhub.org/sops/833 | iPSC-derived chondronoid | 3D pellet culture; orbital shaking; non-adherent plates (60 rpm, 24 days) | APEL2 + 5% PFHM II + 200 µM sodium ascorbate + Pen/Strep (no FGF2 after day 20) | Late (44 Days) | Kathryn Yammine | RNAseq | ||||||||||
| CEL-250605SHO-52 | R719C_1-4_l | CEL-250605SHO-2 | https://fairdomhub.org/sops/833 | iPSC-derived chondronoid | 3D pellet culture; orbital shaking; non-adherent plates (60 rpm, 24 days) | APEL2 + 5% PFHM II + 200 µM sodium ascorbate + Pen/Strep (no FGF2 after day 20) | Late (44 Days) | Kathryn Yammine | RNAseq | ||||||||||
| CEL-250605SHO-53 | R719C_2-1_l | CEL-250605SHO-2 | https://fairdomhub.org/sops/833 | iPSC-derived chondronoid | 3D pellet culture; orbital shaking; non-adherent plates (60 rpm, 24 days) | APEL2 + 5% PFHM II + 200 µM sodium ascorbate + Pen/Strep (no FGF2 after day 20) | Late (44 Days) | Kathryn Yammine | RNAseq | ||||||||||
| CEL-250605SHO-54 | R719C_2-2_l | CEL-250605SHO-2 | https://fairdomhub.org/sops/833 | iPSC-derived chondronoid | 3D pellet culture; orbital shaking; non-adherent plates (60 rpm, 24 days) | APEL2 + 5% PFHM II + 200 µM sodium ascorbate + Pen/Strep (no FGF2 after day 20) | Late (44 Days) | Kathryn Yammine | RNAseq | ||||||||||
| CEL-250605SHO-55 | R719C_2-3_l | CEL-250605SHO-2 | https://fairdomhub.org/sops/833 | iPSC-derived chondronoid | 3D pellet culture; orbital shaking; non-adherent plates (60 rpm, 24 days) | APEL2 + 5% PFHM II + 200 µM sodium ascorbate + Pen/Strep (no FGF2 after day 20) | Late (44 Days) | Kathryn Yammine | RNAseq | ||||||||||
| CEL-250605SHO-56 | R719C_2-4_l | CEL-250605SHO-2 | https://fairdomhub.org/sops/833 | iPSC-derived chondronoid | 3D pellet culture; orbital shaking; non-adherent plates (60 rpm, 24 days) | APEL2 + 5% PFHM II + 200 µM sodium ascorbate + Pen/Strep (no FGF2 after day 20) | Late (44 Days) | Kathryn Yammine | RNAseq | ||||||||||
| CEL-250605SHO-57 | R719C_3-1_l | CEL-250605SHO-2 | https://fairdomhub.org/sops/833 | iPSC-derived chondronoid | 3D pellet culture; orbital shaking; non-adherent plates (60 rpm, 24 days) | APEL2 + 5% PFHM II + 200 µM sodium ascorbate + Pen/Strep (no FGF2 after day 20) | Late (44 Days) | Kathryn Yammine | RNAseq | ||||||||||
| CEL-250605SHO-58 | R719C_3-2_l | CEL-250605SHO-2 | https://fairdomhub.org/sops/833 | iPSC-derived chondronoid | 3D pellet culture; orbital shaking; non-adherent plates (60 rpm, 24 days) | APEL2 + 5% PFHM II + 200 µM sodium ascorbate + Pen/Strep (no FGF2 after day 20) | Late (44 Days) | Kathryn Yammine | RNAseq | ||||||||||
| CEL-250605SHO-59 | R719C_3-3_l | CEL-250605SHO-2 | https://fairdomhub.org/sops/833 | iPSC-derived chondronoid | 3D pellet culture; orbital shaking; non-adherent plates (60 rpm, 24 days) | APEL2 + 5% PFHM II + 200 µM sodium ascorbate + Pen/Strep (no FGF2 after day 20) | Late (44 Days) | Kathryn Yammine | RNAseq | ||||||||||
| CEL-250605SHO-60 | R719C_3-4_l | CEL-250605SHO-2 | https://fairdomhub.org/sops/833 | iPSC-derived chondronoid | 3D pellet culture; orbital shaking; non-adherent plates (60 rpm, 24 days) | APEL2 + 5% PFHM II + 200 µM sodium ascorbate + Pen/Strep (no FGF2 after day 20) | Late (44 Days) | Kathryn Yammine | RNAseq | ||||||||||
| CEL-250606SHO-1 | HT-1080 | Homo Sapiens | https://fairdomhub.org/sops/835 | ATCC | Human Fibrosarcoma Cell line | Kathryn Yammine | Proteomics | Vapor phase of liquid nitrogen | ccl-121 | https://www.atcc.org/products/ccl-121 | |||||||||
| CEL-250606SHO-2 | HT-1080 transfected with WT | CEL-250606SHO-1; CEL-250605SHO-1 | https://fairdomhub.org/sops/835 | Transfected Cell Line | Kathryn Yammine | Proteomics | |||||||||||||
| CEL-250606SHO-3 | HT-1080 transfected with Arg719Cys | CEL-250606SHO-1; CEL-250605SHO-2 | https://fairdomhub.org/sops/835 | Transfected Cell Line | Kathryn Yammine | Proteomics | |||||||||||||
| CEL-250606SHO-4 | Collagen extracted from chondronoids of both WT and Arg719Cys | CEL-250605SHO-1; CEL-250605SHO-2 | https://fairdomhub.org/sops/834 | Collagen | Kathryn Yammine | SDS-Page | |||||||||||||
| CEL-250606SHO-5 | 405A | CEL-250605SHO-2 | https://fairdomhub.org/sops/834 | iPSC-derived chondronoid | 3D pellet culture; orbital shaking; non-adherent plates (60 rpm, 24 days) | APEL2 + 5% PFHM II + 200 µM sodium ascorbate + Pen/Strep (no FGF2 after day 20) | Late (44 Days) | Kathryn Yammine | TUNEL | ||||||||||
| CEL-250606SHO-6 | 405B | CEL-250605SHO-2 | https://fairdomhub.org/sops/834 | iPSC-derived chondronoid | 3D pellet culture; orbital shaking; non-adherent plates (60 rpm, 24 days) | APEL2 + 5% PFHM II + 200 µM sodium ascorbate + Pen/Strep (no FGF2 after day 20) | Late (44 Days) | Kathryn Yammine | TUNEL | ||||||||||
| CEL-250606SHO-7 | 405C | CEL-250605SHO-2 | https://fairdomhub.org/sops/834 | iPSC-derived chondronoid | 3D pellet culture; orbital shaking; non-adherent plates (60 rpm, 24 days) | APEL2 + 5% PFHM II + 200 µM sodium ascorbate + Pen/Strep (no FGF2 after day 20) | Late (44 Days) | Kathryn Yammine | TUNEL | ||||||||||
| CEL-250606SHO-8 | 452A | CEL-250605SHO-1 | https://fairdomhub.org/sops/834 | iPSC-derived chondronoid | 3D pellet culture; orbital shaking; non-adherent plates (60 rpm, 24 days) | APEL2 + 5% PFHM II + 200 µM sodium ascorbate + Pen/Strep (no FGF2 after day 20) | Late (44 Days) | Kathryn Yammine | TUNEL | ||||||||||
| CEL-250606SHO-9 | 452B | CEL-250605SHO-1 | https://fairdomhub.org/sops/834 | iPSC-derived chondronoid | 3D pellet culture; orbital shaking; non-adherent plates (60 rpm, 24 days) | APEL2 + 5% PFHM II + 200 µM sodium ascorbate + Pen/Strep (no FGF2 after day 20) | Late (44 Days) | Kathryn Yammine | TUNEL | ||||||||||
| CEL-250606SHO-10 | 452C | CEL-250605SHO-1 | https://fairdomhub.org/sops/834 | iPSC-derived chondronoid | 3D pellet culture; orbital shaking; non-adherent plates (60 rpm, 24 days) | APEL2 + 5% PFHM II + 200 µM sodium ascorbate + Pen/Strep (no FGF2 after day 20) | Late (44 Days) | Kathryn Yammine | TUNEL | ||||||||||
| CEL-250606SHO-11 | 688A | CEL-250605SHO-2 | https://fairdomhub.org/sops/834 | iPSC-derived chondronoid | 3D pellet culture; orbital shaking; non-adherent plates (60 rpm, 24 days) | APEL2 + 5% PFHM II + 200 µM sodium ascorbate + Pen/Strep (no FGF2 after day 20) | Late (44 Days) | Kathryn Yammine | TUNEL | ||||||||||
| CEL-250606SHO-12 | 688B | CEL-250605SHO-2 | https://fairdomhub.org/sops/834 | iPSC-derived chondronoid | 3D pellet culture; orbital shaking; non-adherent plates (60 rpm, 24 days) | APEL2 + 5% PFHM II + 200 µM sodium ascorbate + Pen/Strep (no FGF2 after day 20) | Late (44 Days) | Kathryn Yammine | TUNEL | ||||||||||
| CEL-250606SHO-13 | 688C | CEL-250605SHO-2 | https://fairdomhub.org/sops/834 | iPSC-derived chondronoid | 3D pellet culture; orbital shaking; non-adherent plates (60 rpm, 24 days) | APEL2 + 5% PFHM II + 200 µM sodium ascorbate + Pen/Strep (no FGF2 after day 20) | Late (44 Days) | Kathryn Yammine | TUNEL | ||||||||||
| CEL-250606SHO-14 | 751A | CEL-250605SHO-1 | https://fairdomhub.org/sops/834 | iPSC-derived chondronoid | 3D pellet culture; orbital shaking; non-adherent plates (60 rpm, 24 days) | APEL2 + 5% PFHM II + 200 µM sodium ascorbate + Pen/Strep (no FGF2 after day 20) | Late (44 Days) | Kathryn Yammine | TUNEL | ||||||||||
| CEL-250606SHO-15 | 751B | CEL-250605SHO-1 | https://fairdomhub.org/sops/834 | iPSC-derived chondronoid | 3D pellet culture; orbital shaking; non-adherent plates (60 rpm, 24 days) | APEL2 + 5% PFHM II + 200 µM sodium ascorbate + Pen/Strep (no FGF2 after day 20) | Late (44 Days) | Kathryn Yammine | TUNEL | ||||||||||
| CEL-250606SHO-16 | 751C | CEL-250605SHO-1 | https://fairdomhub.org/sops/834 | iPSC-derived chondronoid | 3D pellet culture; orbital shaking; non-adherent plates (60 rpm, 24 days) | APEL2 + 5% PFHM II + 200 µM sodium ascorbate + Pen/Strep (no FGF2 after day 20) | Late (44 Days) | Kathryn Yammine | TUNEL | ||||||||||
| CEL-250606SHO-17 | 985A | CEL-250605SHO-2 | https://fairdomhub.org/sops/834 | iPSC-derived chondronoid | 3D pellet culture; orbital shaking; non-adherent plates (60 rpm, 24 days) | APEL2 + 5% PFHM II + 200 µM sodium ascorbate + Pen/Strep (no FGF2 after day 20) | Late (44 Days) | Kathryn Yammine | TUNEL | ||||||||||
| CEL-250606SHO-18 | 985B | CEL-250605SHO-2 | https://fairdomhub.org/sops/834 | iPSC-derived chondronoid | 3D pellet culture; orbital shaking; non-adherent plates (60 rpm, 24 days) | APEL2 + 5% PFHM II + 200 µM sodium ascorbate + Pen/Strep (no FGF2 after day 20) | Late (44 Days) | Kathryn Yammine | TUNEL | ||||||||||
| CEL-250606SHO-19 | 985C | CEL-250605SHO-2 | https://fairdomhub.org/sops/834 | iPSC-derived chondronoid | 3D pellet culture; orbital shaking; non-adherent plates (60 rpm, 24 days) | APEL2 + 5% PFHM II + 200 µM sodium ascorbate + Pen/Strep (no FGF2 after day 20) | Late (44 Days) | Kathryn Yammine | TUNEL |
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| D.IMG-250606SHO-32 | 452A_0002_fitc.jpg | 44166a7a352f2c0e5c838da749b533a0 | https://omero.mit.edu/webclient/img_detail/25757/?dataset=1954 | CEL-250606SHO-8 | Kathryn Yammine | FITC | TUNEL | https://fairdomhub.org/sops/834 | ECHO Revolve 4 fluorescence microscope | ECHO Pro App | |||
| D.IMG-250606SHO-33 | 452A_0002_fitc.tiff | acb8a9abac067577f8d769c86fb2e17b | https://omero.mit.edu/webclient/img_detail/25755/?dataset=1954 | CEL-250606SHO-8 | Kathryn Yammine | FITC | TUNEL | https://fairdomhub.org/sops/834 | ECHO Revolve 4 fluorescence microscope | ECHO Pro App | |||
| D.IMG-250606SHO-34 | 452B bf_0001.jpg | 4fe7c2f431e72da5c92eaf9cb36d4121 | https://omero.mit.edu/webclient/img_detail/25686/?dataset=1954 | CEL-250606SHO-9 | Kathryn Yammine | TUNEL | https://fairdomhub.org/sops/834 | ECHO Revolve 4 fluorescence microscope | ECHO Pro App | ||||
| D.IMG-250606SHO-35 | 452B_0001 2.jpg | 283639333e1d7b3804aa9f151714f436 | https://omero.mit.edu/webclient/img_detail/25720/?dataset=1954 | CEL-250606SHO-9 | Kathryn Yammine | TUNEL | https://fairdomhub.org/sops/834 | ECHO Revolve 4 fluorescence microscope | ECHO Pro App | ||||
| D.IMG-250606SHO-36 | 452B_0001_fitc.jpg | 678c3991dfbbe44884196d9661d2dba1 | https://omero.mit.edu/webclient/img_detail/25651/?dataset=1954 | CEL-250606SHO-9 | Kathryn Yammine | FITC | TUNEL | https://fairdomhub.org/sops/834 | ECHO Revolve 4 fluorescence microscope | ECHO Pro App | |||
| D.IMG-250606SHO-37 | 452B_0001_fitc.tiff | 9adceab7db46c5237087fb8ecb9b0f79 | https://omero.mit.edu/webclient/img_detail/25638/?dataset=1954 | CEL-250606SHO-9 | Kathryn Yammine | FITC | TUNEL | https://fairdomhub.org/sops/834 | ECHO Revolve 4 fluorescence microscope | ECHO Pro App | |||
| D.IMG-250606SHO-38 | 452B_0002 2.jpg | 6b30a0d4cad5afac42a4824c5cbb2b47 | https://omero.mit.edu/webclient/img_detail/25735/?dataset=1954 | CEL-250606SHO-9 | Kathryn Yammine | TUNEL | https://fairdomhub.org/sops/834 | ECHO Revolve 4 fluorescence microscope | ECHO Pro App | ||||
| D.IMG-250606SHO-39 | 452B_0002 bf.jpg | dfd4de1f79586ec8b2caf670b46fc473 | https://omero.mit.edu/webclient/img_detail/25695/?dataset=1954 | CEL-250606SHO-9 | Kathryn Yammine | TUNEL | https://fairdomhub.org/sops/834 | ECHO Revolve 4 fluorescence microscope | ECHO Pro App | ||||
| D.IMG-250606SHO-40 | 452B_0002_fitc.jpg | 969aad47e5a5c7633047139c5281be5d | https://omero.mit.edu/webclient/img_detail/25744/?dataset=1954 | CEL-250606SHO-9 | Kathryn Yammine | FITC | TUNEL | https://fairdomhub.org/sops/834 | ECHO Revolve 4 fluorescence microscope | ECHO Pro App | |||
| D.IMG-250606SHO-41 | 452B_0002_fitc.tiff | 2441b06817811c7ea044a1d69df712fd | https://omero.mit.edu/webclient/img_detail/25687/?dataset=1954 | CEL-250606SHO-9 | Kathryn Yammine | FITC | TUNEL | https://fairdomhub.org/sops/834 | ECHO Revolve 4 fluorescence microscope | ECHO Pro App | |||
| D.IMG-250606SHO-42 | 452C bf_0001.jpg | c0ebac38d4ddd0b690c1d5970dcef3d3 | https://omero.mit.edu/webclient/img_detail/25689/?dataset=1954 | CEL-250606SHO-10 | Kathryn Yammine | TUNEL | https://fairdomhub.org/sops/834 | ECHO Revolve 4 fluorescence microscope | ECHO Pro App | ||||
| D.IMG-250606SHO-43 | 452C bf_0002.jpg | b8a3f887aa3d056f7206ce9b44bfe0d0 | https://omero.mit.edu/webclient/img_detail/25715/?dataset=1954 | CEL-250606SHO-10 | Kathryn Yammine | TUNEL | https://fairdomhub.org/sops/834 | ECHO Revolve 4 fluorescence microscope | ECHO Pro App | ||||
| D.IMG-250606SHO-44 | 452C_0001 2.jpg | 97cef43890fb11b905d48c5b3c843da7 | https://omero.mit.edu/webclient/img_detail/25655/?dataset=1954 | CEL-250606SHO-10 | Kathryn Yammine | TUNEL | https://fairdomhub.org/sops/834 | ECHO Revolve 4 fluorescence microscope | ECHO Pro App | ||||
| D.IMG-250606SHO-45 | 452C_0001_fitc.jpg | 6300db01400227ac0d8c346428796d61 | https://omero.mit.edu/webclient/img_detail/25732/?dataset=1954 | CEL-250606SHO-10 | Kathryn Yammine | FITC | TUNEL | https://fairdomhub.org/sops/834 | ECHO Revolve 4 fluorescence microscope | ECHO Pro App | |||
| D.IMG-250606SHO-46 | 452C_0001_fitc.tiff | 7813ca9ea05bcca522123732fa8466d4 | https://omero.mit.edu/webclient/img_detail/25727/?dataset=1954 | CEL-250606SHO-10 | Kathryn Yammine | FITC | TUNEL | https://fairdomhub.org/sops/834 | ECHO Revolve 4 fluorescence microscope | ECHO Pro App | |||
| D.IMG-250606SHO-47 | 452C_0002 2.jpg | 8797fbfc2d64d391741421eab6226c2c | https://omero.mit.edu/webclient/img_detail/25716/?dataset=1954 | CEL-250606SHO-10 | Kathryn Yammine | TUNEL | https://fairdomhub.org/sops/834 | ECHO Revolve 4 fluorescence microscope | ECHO Pro App | ||||
| D.IMG-250606SHO-48 | 452C_0002_fitc.jpg | 509b9b190799261b557ffb180a6a57ae | https://omero.mit.edu/webclient/img_detail/25662/?dataset=1954 | CEL-250606SHO-10 | Kathryn Yammine | FITC | TUNEL | https://fairdomhub.org/sops/834 | ECHO Revolve 4 fluorescence microscope | ECHO Pro App | |||
| D.IMG-250606SHO-49 | 452C_0002_fitc.tiff | a1799e93f3c6660740446ea75ecfc0ac | https://omero.mit.edu/webclient/img_detail/25742/?dataset=1954 | CEL-250606SHO-10 | Kathryn Yammine | FITC | TUNEL | https://fairdomhub.org/sops/834 | ECHO Revolve 4 fluorescence microscope | ECHO Pro App | |||
| D.IMG-250606SHO-50 | 688A bf_0001.jpg | c69a17f7bd80f64e6ffe54472f708ae4 | https://omero.mit.edu/webclient/img_detail/25717/?dataset=1954 | CEL-250606SHO-11 | Kathryn Yammine | TUNEL | https://fairdomhub.org/sops/834 | ECHO Revolve 4 fluorescence microscope | ECHO Pro App | ||||
| D.IMG-250606SHO-51 | 688A bf_0002.jpg | 841302e67b7cfbc1611f810d8307fb44 | https://omero.mit.edu/webclient/img_detail/25652/?dataset=1954 | CEL-250606SHO-11 | Kathryn Yammine | TUNEL | https://fairdomhub.org/sops/834 | ECHO Revolve 4 fluorescence microscope | ECHO Pro App | ||||
| D.IMG-250606SHO-52 | 688A_0001 2.jpg | 7f01ae0cdbb31cfb23615afe3ea74d84 | https://omero.mit.edu/webclient/img_detail/25673/?dataset=1954 | CEL-250606SHO-11 | Kathryn Yammine | TUNEL | https://fairdomhub.org/sops/834 | ECHO Revolve 4 fluorescence microscope | ECHO Pro App | ||||
| D.IMG-250606SHO-53 | 688A_0001_fitc.jpg | 4ea0098f8814adc1b80a1698a9d3bd89 | https://omero.mit.edu/webclient/img_detail/25719/?dataset=1954 | CEL-250606SHO-11 | Kathryn Yammine | FITC | TUNEL | https://fairdomhub.org/sops/834 | ECHO Revolve 4 fluorescence microscope | ECHO Pro App | |||
| D.IMG-250606SHO-54 | 688A_0001_fitc.tiff | 70fe30687da9b9c56d06fa3c8907ae0c | https://omero.mit.edu/webclient/img_detail/25724/?dataset=1954 | CEL-250606SHO-11 | Kathryn Yammine | FITC | TUNEL | https://fairdomhub.org/sops/834 | ECHO Revolve 4 fluorescence microscope | ECHO Pro App | |||
| D.IMG-250606SHO-55 | 688A_0002 2.jpg | 33bac6d32726cfd7f6a3188e01ab7bd5 | https://omero.mit.edu/webclient/img_detail/25703/?dataset=1954 | CEL-250606SHO-11 | Kathryn Yammine | TUNEL | https://fairdomhub.org/sops/834 | ECHO Revolve 4 fluorescence microscope | ECHO Pro App | ||||
| D.IMG-250606SHO-56 | 688A_0002_fitc.jpg | 9022667e4d2b0168f945e6258ee634f7 | https://omero.mit.edu/webclient/img_detail/25739/?dataset=1954 | CEL-250606SHO-11 | Kathryn Yammine | FITC | TUNEL | https://fairdomhub.org/sops/834 | ECHO Revolve 4 fluorescence microscope | ECHO Pro App | |||
| D.IMG-250606SHO-57 | 688A_0002_fitc.tiff | ec3e70acbb33caa2991de1e0c6dbd53d | https://omero.mit.edu/webclient/img_detail/25756/?dataset=1954 | CEL-250606SHO-11 | Kathryn Yammine | FITC | TUNEL | https://fairdomhub.org/sops/834 | ECHO Revolve 4 fluorescence microscope | ECHO Pro App | |||
| D.IMG-250606SHO-58 | 688B bf_0001.jpg | 88948947aa25709bcc7fa6a9d1a011e9 | https://omero.mit.edu/webclient/img_detail/25711/?dataset=1954 | CEL-250606SHO-12 | Kathryn Yammine | TUNEL | https://fairdomhub.org/sops/834 | ECHO Revolve 4 fluorescence microscope | ECHO Pro App | ||||
| D.IMG-250606SHO-59 | 688B bf_0002.jpg | 08471b6a4973d15928c07c92a5d980e6 | https://omero.mit.edu/webclient/img_detail/25653/?dataset=1954 | CEL-250606SHO-12 | Kathryn Yammine | TUNEL | https://fairdomhub.org/sops/834 | ECHO Revolve 4 fluorescence microscope | ECHO Pro App | ||||
| D.IMG-250606SHO-60 | 688B_0001 2.jpg | 66894deaae1e7751406659f84c7ee634 | https://omero.mit.edu/webclient/img_detail/25718/?dataset=1954 | CEL-250606SHO-12 | Kathryn Yammine | TUNEL | https://fairdomhub.org/sops/834 | ECHO Revolve 4 fluorescence microscope | ECHO Pro App | ||||
| D.IMG-250606SHO-61 | 688B_0001_fitc.jpg | de4bb0561db3d83a69e302e65be03c2d | https://omero.mit.edu/webclient/img_detail/25664/?dataset=1954 | CEL-250606SHO-12 | Kathryn Yammine | FITC | TUNEL | https://fairdomhub.org/sops/834 | ECHO Revolve 4 fluorescence microscope | ECHO Pro App | |||
| D.IMG-250606SHO-62 | 688B_0001_fitc.tiff | 4995d58cc86306425e3cd27d2571b9af | https://omero.mit.edu/webclient/img_detail/25666/?dataset=1954 | CEL-250606SHO-12 | Kathryn Yammine | FITC | TUNEL | https://fairdomhub.org/sops/834 | ECHO Revolve 4 fluorescence microscope | ECHO Pro App | |||
| D.IMG-250606SHO-63 | 688B_0002 2.jpg | fc3c47f699dd9aee84a4d2f62a5da2ef | https://omero.mit.edu/webclient/img_detail/25669/?dataset=1954 | CEL-250606SHO-12 | Kathryn Yammine | TUNEL | https://fairdomhub.org/sops/834 | ECHO Revolve 4 fluorescence microscope | ECHO Pro App | ||||
| D.IMG-250606SHO-64 | 688B_0002_fitc.jpg | f841d913af47c7919ef40d25fae9492d | https://omero.mit.edu/webclient/img_detail/25721/?dataset=1954 | CEL-250606SHO-12 | Kathryn Yammine | FITC | TUNEL | https://fairdomhub.org/sops/834 | ECHO Revolve 4 fluorescence microscope | ECHO Pro App | |||
| D.IMG-250606SHO-65 | 688B_0002_fitc.tiff | 89d1f960810630f6eb2237199c09d66a | https://omero.mit.edu/webclient/img_detail/25670/?dataset=1954 | CEL-250606SHO-12 | Kathryn Yammine | FITC | TUNEL | https://fairdomhub.org/sops/834 | ECHO Revolve 4 fluorescence microscope | ECHO Pro App | |||
| D.IMG-250606SHO-66 | 688C bf_0001.jpg | 9c6fe871f77c481c6783e49c9b6ff20e | https://omero.mit.edu/webclient/img_detail/25709/?dataset=1954 | CEL-250606SHO-13 | Kathryn Yammine | TUNEL | https://fairdomhub.org/sops/834 | ECHO Revolve 4 fluorescence microscope | ECHO Pro App | ||||
| D.IMG-250606SHO-67 | 688C bf_0002.jpg | b934bb23b786838597214fa501f30e21 | https://omero.mit.edu/webclient/img_detail/25663/?dataset=1954 | CEL-250606SHO-13 | Kathryn Yammine | TUNEL | https://fairdomhub.org/sops/834 | ECHO Revolve 4 fluorescence microscope | ECHO Pro App | ||||
| D.IMG-250606SHO-68 | 688C_0001 2.jpg | 8556c6d315abf257ce581ac394ac8c00 | https://omero.mit.edu/webclient/img_detail/25698/?dataset=1954 | CEL-250606SHO-13 | Kathryn Yammine | TUNEL | https://fairdomhub.org/sops/834 | ECHO Revolve 4 fluorescence microscope | ECHO Pro App | ||||
| D.IMG-250606SHO-69 | 688C_0001_fitc.jpg | 8787055d3a8d573e486148fd4fd68b95 | https://omero.mit.edu/webclient/img_detail/25740/?dataset=1954 | CEL-250606SHO-13 | Kathryn Yammine | FITC | TUNEL | https://fairdomhub.org/sops/834 | ECHO Revolve 4 fluorescence microscope | ECHO Pro App | |||
| D.IMG-250606SHO-70 | 688C_0001_fitc.tiff | f0a1defd83f12c869454faa3814c0554 | https://omero.mit.edu/webclient/img_detail/25659/?dataset=1954 | CEL-250606SHO-13 | Kathryn Yammine | FITC | TUNEL | https://fairdomhub.org/sops/834 | ECHO Revolve 4 fluorescence microscope | ECHO Pro App | |||
| D.IMG-250606SHO-71 | 688C_0002 2.jpg | 60b198279bb64e5ee6a8687fbe3c5a4c | https://omero.mit.edu/webclient/img_detail/25710/?dataset=1954 | CEL-250606SHO-13 | Kathryn Yammine | TUNEL | https://fairdomhub.org/sops/834 | ECHO Revolve 4 fluorescence microscope | ECHO Pro App | ||||
| D.IMG-250606SHO-72 | 688C_0002_fitc.jpg | bbea534c1979cc107e283d853fa39d1d | https://omero.mit.edu/webclient/img_detail/25636/?dataset=1954 | CEL-250606SHO-13 | Kathryn Yammine | FITC | TUNEL | https://fairdomhub.org/sops/834 | ECHO Revolve 4 fluorescence microscope | ECHO Pro App | |||
| D.IMG-250606SHO-73 | 688C_0002_fitc.tiff | 5623d955e29596a3710c31e459e65e4a | https://omero.mit.edu/webclient/img_detail/25645/?dataset=1954 | CEL-250606SHO-13 | Kathryn Yammine | FITC | TUNEL | https://fairdomhub.org/sops/834 | ECHO Revolve 4 fluorescence microscope | ECHO Pro App | |||
| D.IMG-250606SHO-74 | 751A bf_0001.jpg | 30bbdba90e7bbcb59ea0b0e42ba0cd0f | https://omero.mit.edu/webclient/img_detail/25677/?dataset=1954 | CEL-250606SHO-14 | Kathryn Yammine | TUNEL | https://fairdomhub.org/sops/834 | ECHO Revolve 4 fluorescence microscope | ECHO Pro App | ||||
| D.IMG-250606SHO-75 | 751A bf_0002.jpg | dd713f2de349252b76235c5ee5cafd1f | https://omero.mit.edu/webclient/img_detail/25734/?dataset=1954 | CEL-250606SHO-14 | Kathryn Yammine | TUNEL | https://fairdomhub.org/sops/834 | ECHO Revolve 4 fluorescence microscope | ECHO Pro App | ||||
| D.IMG-250606SHO-76 | 751A_0001 2.jpg | 2fa506c5d40e01c8ee9f8446cd86851d | https://omero.mit.edu/webclient/img_detail/25648/?dataset=1954 | CEL-250606SHO-14 | Kathryn Yammine | TUNEL | https://fairdomhub.org/sops/834 | ECHO Revolve 4 fluorescence microscope | ECHO Pro App | ||||
| D.IMG-250606SHO-77 | 751A_0001_fitc.jpg | a70800c08885856abd401e22ef75e4fd | https://omero.mit.edu/webclient/img_detail/25656/?dataset=1954 | CEL-250606SHO-14 | Kathryn Yammine | FITC | TUNEL | https://fairdomhub.org/sops/834 | ECHO Revolve 4 fluorescence microscope | ECHO Pro App | |||
| D.IMG-250606SHO-78 | 751A_0001_fitc.tiff | 67f08208c542b30a7ec76e055fae42da | https://omero.mit.edu/webclient/img_detail/25760/?dataset=1954 | CEL-250606SHO-14 | Kathryn Yammine | FITC | TUNEL | https://fairdomhub.org/sops/834 | ECHO Revolve 4 fluorescence microscope | ECHO Pro App | |||
| D.IMG-250606SHO-79 | 751A_0002 2.jpg | a790221bb5ceae28c51aeb537e85b791 | https://omero.mit.edu/webclient/img_detail/25736/?dataset=1954 | CEL-250606SHO-14 | Kathryn Yammine | TUNEL | https://fairdomhub.org/sops/834 | ECHO Revolve 4 fluorescence microscope | ECHO Pro App | ||||
| D.IMG-250606SHO-80 | 751A_0002_fitc.jpg | b4b8174afb00d182af2ed4a178f81ce7 | https://omero.mit.edu/webclient/img_detail/25722/?dataset=1954 | CEL-250606SHO-14 | Kathryn Yammine | FITC | TUNEL | https://fairdomhub.org/sops/834 | ECHO Revolve 4 fluorescence microscope | ECHO Pro App | |||
| D.IMG-250606SHO-81 | 751A_0002_fitc.tiff | c1d704b9cd8db35c852e8e6e794756a9 | https://omero.mit.edu/webclient/img_detail/25704/?dataset=1954 | CEL-250606SHO-14 | Kathryn Yammine | FITC | TUNEL | https://fairdomhub.org/sops/834 | ECHO Revolve 4 fluorescence microscope | ECHO Pro App | |||
| D.IMG-250606SHO-82 | 751B bf_0001.jpg | 16e98346d8709372f54333810fbd9348 | https://omero.mit.edu/webclient/img_detail/25680/?dataset=1954 | CEL-250606SHO-15 | Kathryn Yammine | TUNEL | https://fairdomhub.org/sops/834 | ECHO Revolve 4 fluorescence microscope | ECHO Pro App | ||||
| D.IMG-250606SHO-83 | 751B bf_0002.jpg | 26e5f806c310bf4b800226414a3a62ce | https://omero.mit.edu/webclient/img_detail/25737/?dataset=1954 | CEL-250606SHO-15 | Kathryn Yammine | TUNEL | https://fairdomhub.org/sops/834 | ECHO Revolve 4 fluorescence microscope | ECHO Pro App | ||||
| D.IMG-250606SHO-84 | 751B_0001 2.jpg | c20ba6f3babf57f4ab74882849309872 | https://omero.mit.edu/webclient/img_detail/25754/?dataset=1954 | CEL-250606SHO-15 | Kathryn Yammine | TUNEL | https://fairdomhub.org/sops/834 | ECHO Revolve 4 fluorescence microscope | ECHO Pro App | ||||
| D.IMG-250606SHO-85 | 751B_0001_fitc.jpg | aecd24b1508da485faac192b8c1169f6 | https://omero.mit.edu/webclient/img_detail/25678/?dataset=1954 | CEL-250606SHO-15 | Kathryn Yammine | FITC | TUNEL | https://fairdomhub.org/sops/834 | ECHO Revolve 4 fluorescence microscope | ECHO Pro App | |||
| D.IMG-250606SHO-86 | 751B_0001_fitc.tiff | f068c6222e5a76a32cc180d50f903f7b | https://omero.mit.edu/webclient/img_detail/25641/?dataset=1954 | CEL-250606SHO-15 | Kathryn Yammine | FITC | TUNEL | https://fairdomhub.org/sops/834 | ECHO Revolve 4 fluorescence microscope | ECHO Pro App | |||
| D.IMG-250606SHO-87 | 751B_0002 2.jpg | 2b795248b263e3d257ff29ffba4d8049 | https://omero.mit.edu/webclient/img_detail/25646/?dataset=1954 | CEL-250606SHO-15 | Kathryn Yammine | TUNEL | https://fairdomhub.org/sops/834 | ECHO Revolve 4 fluorescence microscope | ECHO Pro App | ||||
| D.IMG-250606SHO-88 | 751B_0002_fitc.jpg | dd129da8f3bb456399dfe039ac54c0eb | https://omero.mit.edu/webclient/img_detail/25665/?dataset=1954 | CEL-250606SHO-15 | Kathryn Yammine | FITC | TUNEL | https://fairdomhub.org/sops/834 | ECHO Revolve 4 fluorescence microscope | ECHO Pro App | |||
| D.IMG-250606SHO-89 | 751B_0002_fitc.tiff | 674da270221c4aa1257c956bb7d1659e | https://omero.mit.edu/webclient/img_detail/25741/?dataset=1954 | CEL-250606SHO-15 | Kathryn Yammine | FITC | TUNEL | https://fairdomhub.org/sops/834 | ECHO Revolve 4 fluorescence microscope | ECHO Pro App | |||
| D.IMG-250606SHO-90 | 751C bf_0001.jpg | 607dd07f72c0fa458e0dac8e8b7d51fa | https://omero.mit.edu/webclient/img_detail/25681/?dataset=1954 | CEL-250606SHO-16 | Kathryn Yammine | TUNEL | https://fairdomhub.org/sops/834 | ECHO Revolve 4 fluorescence microscope | ECHO Pro App | ||||
| D.IMG-250606SHO-91 | 751C bf_0002.jpg | d807e43dfd6698d7b3dd10811c85aa51 | https://omero.mit.edu/webclient/img_detail/25738/?dataset=1954 | CEL-250606SHO-16 | Kathryn Yammine | TUNEL | https://fairdomhub.org/sops/834 | ECHO Revolve 4 fluorescence microscope | ECHO Pro App | ||||
| D.IMG-250606SHO-92 | 751C_0001 (neg control) 2.jpg | c2c32ae326d037544d95e67d99dedc14 | https://omero.mit.edu/webclient/img_detail/25676/?dataset=1954 | CEL-250606SHO-16 | Kathryn Yammine | TUNEL | https://fairdomhub.org/sops/834 | ECHO Revolve 4 fluorescence microscope | ECHO Pro App | ||||
| D.IMG-250606SHO-93 | 751C_0001 (neg control)_fitc.jpg | 0b0f001dca9f7fad6ebf5baf3a7e5cbb | https://omero.mit.edu/webclient/img_detail/25684/?dataset=1954 | CEL-250606SHO-16 | Kathryn Yammine | FITC | TUNEL | https://fairdomhub.org/sops/834 | ECHO Revolve 4 fluorescence microscope | ECHO Pro App | |||
| D.IMG-250606SHO-94 | 751C_0001 (neg control)_fitc.tiff | 4e213554293e77ff5dc870dbe2eaa0d1 | https://omero.mit.edu/webclient/img_detail/25671/?dataset=1954 | CEL-250606SHO-16 | Kathryn Yammine | FITC | TUNEL | https://fairdomhub.org/sops/834 | ECHO Revolve 4 fluorescence microscope | ECHO Pro App | |||
| D.IMG-250606SHO-95 | 751C_0002 (neg control) 2.jpg | 18b6b7b685d9f87e3aceff204dd01050 | https://omero.mit.edu/webclient/img_detail/25654/?dataset=1954 | CEL-250606SHO-16 | Kathryn Yammine | TUNEL | https://fairdomhub.org/sops/834 | ECHO Revolve 4 fluorescence microscope | ECHO Pro App | ||||
| D.IMG-250606SHO-96 | 751C_0002 (neg control)_fitc.jpg | 7b8afca9388806b0ef11e525a7900125 | https://omero.mit.edu/webclient/img_detail/25667/?dataset=1954 | CEL-250606SHO-16 | Kathryn Yammine | FITC | TUNEL | https://fairdomhub.org/sops/834 | ECHO Revolve 4 fluorescence microscope | ECHO Pro App | |||
| D.IMG-250606SHO-97 | 751C_0002 (neg control)_fitc.tiff | 3124c0bd9a8631f622f13e102c675543 | https://omero.mit.edu/webclient/img_detail/25650/?dataset=1954 | CEL-250606SHO-16 | Kathryn Yammine | FITC | TUNEL | https://fairdomhub.org/sops/834 | ECHO Revolve 4 fluorescence microscope | ECHO Pro App | |||
| D.IMG-250606SHO-98 | 985A bf_0001.jpg | dc3168d9327760d46b86744541995622 | https://omero.mit.edu/webclient/img_detail/25702/?dataset=1954 | CEL-250606SHO-17 | Kathryn Yammine | TUNEL | https://fairdomhub.org/sops/834 | ECHO Revolve 4 fluorescence microscope | ECHO Pro App | ||||
| D.IMG-250606SHO-99 | 985A bf_0002.jpg | bf78f679444f89f9d6eb8c6d5c266443 | https://omero.mit.edu/webclient/img_detail/25707/?dataset=1954 | CEL-250606SHO-17 | Kathryn Yammine | TUNEL | https://fairdomhub.org/sops/834 | ECHO Revolve 4 fluorescence microscope | ECHO Pro App | ||||
| D.IMG-250606SHO-100 | 985A_0001 2.jpg | d9c3605e163580649d6fd8c0c66bb9b8 | https://omero.mit.edu/webclient/img_detail/25644/?dataset=1954 | CEL-250606SHO-17 | Kathryn Yammine | TUNEL | https://fairdomhub.org/sops/834 | ECHO Revolve 4 fluorescence microscope | ECHO Pro App | ||||
| D.IMG-250606SHO-101 | 985A_0001_fitc.jpg | 5582f524cc44c91ed287a491e83f6326 | https://omero.mit.edu/webclient/img_detail/25685/?dataset=1954 | CEL-250606SHO-17 | Kathryn Yammine | FITC | TUNEL | https://fairdomhub.org/sops/834 | ECHO Revolve 4 fluorescence microscope | ECHO Pro App | |||
| D.IMG-250606SHO-102 | 985A_0001_fitc.tiff | ff00bbb89156440e9097d694e18d29be | https://omero.mit.edu/webclient/img_detail/25691/?dataset=1954 | CEL-250606SHO-17 | Kathryn Yammine | FITC | TUNEL | https://fairdomhub.org/sops/834 | ECHO Revolve 4 fluorescence microscope | ECHO Pro App | |||
| D.IMG-250606SHO-103 | 985A_0002 2.jpg | fc5abfaea98c37f8635d2bc8cb69ea51 | https://omero.mit.edu/webclient/img_detail/25729/?dataset=1954 | CEL-250606SHO-17 | Kathryn Yammine | TUNEL | https://fairdomhub.org/sops/834 | ECHO Revolve 4 fluorescence microscope | ECHO Pro App | ||||
| D.IMG-250606SHO-104 | 985A_0002_fitc.jpg | 3de7aed84f07177fd2d6798e0d8d8bfb | https://omero.mit.edu/webclient/img_detail/25640/?dataset=1954 | CEL-250606SHO-17 | Kathryn Yammine | FITC | TUNEL | https://fairdomhub.org/sops/834 | ECHO Revolve 4 fluorescence microscope | ECHO Pro App | |||
| D.IMG-250606SHO-105 | 985A_0002_fitc.tiff | 67ab748bf42b6b9b5b5d9409f5c27bb6 | https://omero.mit.edu/webclient/img_detail/25728/?dataset=1954 | CEL-250606SHO-17 | Kathryn Yammine | FITC | TUNEL | https://fairdomhub.org/sops/834 | ECHO Revolve 4 fluorescence microscope | ECHO Pro App | |||
| D.IMG-250606SHO-106 | 985B bf_0001.jpg | 2037f9c7b5f5695679d03dd21e8d405c | https://omero.mit.edu/webclient/img_detail/25699/?dataset=1954 | CEL-250606SHO-18 | Kathryn Yammine | TUNEL | https://fairdomhub.org/sops/834 | ECHO Revolve 4 fluorescence microscope | ECHO Pro App | ||||
| D.IMG-250606SHO-107 | 985B bf_0002.jpg | ce839cfeabe70ee6b0aead3b4b97748e | https://omero.mit.edu/webclient/img_detail/25708/?dataset=1954 | CEL-250606SHO-18 | Kathryn Yammine | TUNEL | https://fairdomhub.org/sops/834 | ECHO Revolve 4 fluorescence microscope | ECHO Pro App | ||||
| D.IMG-250606SHO-108 | 985B_0001 2.jpg | cfb4ea0830a3868206a5b707a6fd4ab4 | https://omero.mit.edu/webclient/img_detail/25725/?dataset=1954 | CEL-250606SHO-18 | Kathryn Yammine | TUNEL | https://fairdomhub.org/sops/834 | ECHO Revolve 4 fluorescence microscope | ECHO Pro App | ||||
| D.IMG-250606SHO-109 | 985B_0001_fitc.jpg | 69da32ea088612e5553bf28dd50b42c2 | https://omero.mit.edu/webclient/img_detail/25700/?dataset=1954 | CEL-250606SHO-18 | Kathryn Yammine | FITC | TUNEL | https://fairdomhub.org/sops/834 | ECHO Revolve 4 fluorescence microscope | ECHO Pro App | |||
| D.IMG-250606SHO-110 | 985B_0001_fitc.tiff | f2a54a88f5e3e3648c7b840670dbe9b2 | https://omero.mit.edu/webclient/img_detail/25748/?dataset=1954 | CEL-250606SHO-18 | Kathryn Yammine | FITC | TUNEL | https://fairdomhub.org/sops/834 | ECHO Revolve 4 fluorescence microscope | ECHO Pro App | |||
| D.IMG-250606SHO-111 | 985B_0002 2.jpg | fb6db83a03bc0b4cccb2f7b9a8eecd12 | https://omero.mit.edu/webclient/img_detail/25639/?dataset=1954 | CEL-250606SHO-18 | Kathryn Yammine | TUNEL | https://fairdomhub.org/sops/834 | ECHO Revolve 4 fluorescence microscope | ECHO Pro App | ||||
| D.IMG-250606SHO-112 | 985B_0002_fitc.jpg | 5c74d2d40be440b3fcfaa7100384e7a6 | https://omero.mit.edu/webclient/img_detail/25750/?dataset=1954 | CEL-250606SHO-18 | Kathryn Yammine | FITC | TUNEL | https://fairdomhub.org/sops/834 | ECHO Revolve 4 fluorescence microscope | ECHO Pro App | |||
| D.IMG-250606SHO-113 | 985B_0002_fitc.tiff | 66267eb588fd3a0e940936fc31b9e886 | https://omero.mit.edu/webclient/img_detail/25637/?dataset=1954 | CEL-250606SHO-18 | Kathryn Yammine | FITC | TUNEL | https://fairdomhub.org/sops/834 | ECHO Revolve 4 fluorescence microscope | ECHO Pro App | |||
| D.IMG-250606SHO-114 | 985C bf_0001.jpg | 5a45f83580616849f805c09ce1389025 | https://omero.mit.edu/webclient/img_detail/25697/?dataset=1954 | CEL-250606SHO-19 | Kathryn Yammine | TUNEL | https://fairdomhub.org/sops/834 | ECHO Revolve 4 fluorescence microscope | ECHO Pro App | ||||
| D.IMG-250606SHO-115 | 985C bf_0002.jpg | a1258eaf0167d8fbf7c6ac523b589073 | https://omero.mit.edu/webclient/img_detail/25712/?dataset=1954 | CEL-250606SHO-19 | Kathryn Yammine | TUNEL | https://fairdomhub.org/sops/834 | ECHO Revolve 4 fluorescence microscope | ECHO Pro App | ||||
| D.IMG-250606SHO-116 | 985C_0001 2.jpg | 7f3928e0e08efd56ccf0b24f3c389e3b | https://omero.mit.edu/webclient/img_detail/25731/?dataset=1954 | CEL-250606SHO-19 | Kathryn Yammine | TUNEL | https://fairdomhub.org/sops/834 | ECHO Revolve 4 fluorescence microscope | ECHO Pro App | ||||
| D.IMG-250606SHO-117 | 985C_0001_fitc.jpg | 5b4609df326ab3eeb82f0c48a35c5220 | https://omero.mit.edu/webclient/img_detail/25643/?dataset=1954 | CEL-250606SHO-19 | Kathryn Yammine | FITC | TUNEL | https://fairdomhub.org/sops/834 | ECHO Revolve 4 fluorescence microscope | ECHO Pro App | |||
| D.IMG-250606SHO-118 | 985C_0001_fitc.tiff | adda06ce684e939d0c35ed46d4768297 | https://omero.mit.edu/webclient/img_detail/25696/?dataset=1954 | CEL-250606SHO-19 | Kathryn Yammine | FITC | TUNEL | https://fairdomhub.org/sops/834 | ECHO Revolve 4 fluorescence microscope | ECHO Pro App | |||
| D.IMG-250606SHO-119 | 985C_0002 2.jpg | 8817f1a50b4e61b7831e1c51f07728e1 | https://omero.mit.edu/webclient/img_detail/25751/?dataset=1954 | CEL-250606SHO-19 | Kathryn Yammine | TUNEL | https://fairdomhub.org/sops/834 | ECHO Revolve 4 fluorescence microscope | ECHO Pro App | ||||
| D.IMG-250606SHO-120 | 985C_0002_fitc.jpg | 9be1dfa4a91ca92cb9dd50e0a5fc61bb | https://omero.mit.edu/webclient/img_detail/25733/?dataset=1954 | CEL-250606SHO-19 | Kathryn Yammine | FITC | TUNEL | https://fairdomhub.org/sops/834 | ECHO Revolve 4 fluorescence microscope | ECHO Pro App | |||
| D.IMG-250606SHO-121 | 985C_0002_fitc.tiff | 01a477c85e567ed807c40da661e34ea8 | https://omero.mit.edu/webclient/img_detail/25743/?dataset=1954 | CEL-250606SHO-19 | Kathryn Yammine | FITC | TUNEL | https://fairdomhub.org/sops/834 | ECHO Revolve 4 fluorescence microscope | ECHO Pro App | |||
| D.IMG-250606SHO-122 | 405A_0001_fitc.jpg - brightness adjusted | b3276946663b6f036b392e84c16176c5 | https://omero.mit.edu/webclient/img_detail/25778/?dataset=1955 | CEL-250606SHO-5 | Kathryn Yammine | FITC | TUNEL | https://fairdomhub.org/sops/834 | ECHO Revolve 4 fluorescence microscope | ECHO Pro App | |||
| D.IMG-250606SHO-123 | 405A_0002_fitc.jpg - brightness adjusted | 695a51e516aa20c0370fc0695bddd37e | https://omero.mit.edu/webclient/img_detail/25786/?dataset=1955 | CEL-250606SHO-5 | Kathryn Yammine | FITC | TUNEL | https://fairdomhub.org/sops/834 | ECHO Revolve 4 fluorescence microscope | ECHO Pro App | |||
| D.IMG-250606SHO-124 | 405B_0001_fitc.jpg - brightness adjusted | d3bcf81853684c1d2976fa76c2737193 | https://omero.mit.edu/webclient/img_detail/25785/?dataset=1955 | CEL-250606SHO-6 | Kathryn Yammine | FITC | TUNEL | https://fairdomhub.org/sops/834 | ECHO Revolve 4 fluorescence microscope | ECHO Pro App | |||
| D.IMG-250606SHO-125 | 405B_0002_fitc.jpg - brightness adjusted | cca1e1bb38a991306f51710e155cbea3 | https://omero.mit.edu/webclient/img_detail/25776/?dataset=1955 | CEL-250606SHO-6 | Kathryn Yammine | FITC | TUNEL | https://fairdomhub.org/sops/834 | ECHO Revolve 4 fluorescence microscope | ECHO Pro App | |||
| D.IMG-250606SHO-126 | 405C_0001_fitc.jpg - brightness adjusted | 5dccc97b9f8122945038c69a4e4a22d1 | https://omero.mit.edu/webclient/img_detail/25770/?dataset=1955 | CEL-250606SHO-7 | Kathryn Yammine | FITC | TUNEL | https://fairdomhub.org/sops/834 | ECHO Revolve 4 fluorescence microscope | ECHO Pro App | |||
| D.IMG-250606SHO-127 | 405C_0002_fitc.jpg - brightness adjusted | 82b88c9df1c7e8f10ba13f1902e7876c | https://omero.mit.edu/webclient/img_detail/25790/?dataset=1955 | CEL-250606SHO-7 | Kathryn Yammine | FITC | TUNEL | https://fairdomhub.org/sops/834 | ECHO Revolve 4 fluorescence microscope | ECHO Pro App | |||
| D.IMG-250606SHO-128 | 452A_0001_fitc.jpg - brightness adjusted | 4b15815a1e6eca9b10fbd67412d31486 | https://omero.mit.edu/webclient/img_detail/25773/?dataset=1955 | CEL-250606SHO-8 | Kathryn Yammine | FITC | TUNEL | https://fairdomhub.org/sops/834 | ECHO Revolve 4 fluorescence microscope | ECHO Pro App | |||
| D.IMG-250606SHO-129 | 452A_0002_fitc.jpg - brightness adjusted | 44166a7a352f2c0e5c838da749b533a0 | https://omero.mit.edu/webclient/img_detail/25763/?dataset=1955 | CEL-250606SHO-8 | Kathryn Yammine | FITC | TUNEL | https://fairdomhub.org/sops/834 | ECHO Revolve 4 fluorescence microscope | ECHO Pro App | |||
| D.IMG-250606SHO-130 | 452B_0001_fitc.jpg - brightness adjusted | 678c3991dfbbe44884196d9661d2dba1 | https://omero.mit.edu/webclient/img_detail/25787/?dataset=1955 | CEL-250606SHO-9 | Kathryn Yammine | FITC | TUNEL | https://fairdomhub.org/sops/834 | ECHO Revolve 4 fluorescence microscope | ECHO Pro App | |||
| D.IMG-250606SHO-131 | 452B_0002_fitc.jpg - brightness adjusted | 969aad47e5a5c7633047139c5281be5d | https://omero.mit.edu/webclient/img_detail/25772/?dataset=1955 | CEL-250606SHO-9 | Kathryn Yammine | FITC | TUNEL | https://fairdomhub.org/sops/834 | ECHO Revolve 4 fluorescence microscope | ECHO Pro App |
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| UID | Name | Scientist | Protocol | Notes | Lab | Parent | Type | StorageType | Volume | VolumeUnits | ExtractionMethod | QC_Instrument |
| RNA-250605SHO-1 | D21-157037 390 | Kathryn Yammine | https://fairdomhub.org/sops/833 | R719C_1-1_e | Shoulders Lab | CEL-250605SHO-43 | polyA RNA | Snap-frozen | 10 | ng | TRIzol (Invitrogen) + Direct-zol RNA Microprep kit (Zymo Research) | Fragment Analyzer |
| RNA-250605SHO-2 | D21-157038 391 | Kathryn Yammine | https://fairdomhub.org/sops/833 | R719C_1-2_e | Shoulders Lab | CEL-250605SHO-44 | polyA RNA | Snap-frozen | 10 | ng | TRIzol (Invitrogen) + Direct-zol RNA Microprep kit (Zymo Research) | Fragment Analyzer |
| RNA-250605SHO-3 | D21-157039 675 | Kathryn Yammine | https://fairdomhub.org/sops/833 | R719C_2-1_e | Shoulders Lab | CEL-250605SHO-45 | polyA RNA | Snap-frozen | 10 | ng | TRIzol (Invitrogen) + Direct-zol RNA Microprep kit (Zymo Research) | Fragment Analyzer |
| RNA-250605SHO-4 | D21-157040 676 | Kathryn Yammine | https://fairdomhub.org/sops/833 | R719C_2-2_e | Shoulders Lab | CEL-250605SHO-46 | polyA RNA | Snap-frozen | 10 | ng | TRIzol (Invitrogen) + Direct-zol RNA Microprep kit (Zymo Research) | Fragment Analyzer |
| RNA-250605SHO-5 | D21-157041 972 | Kathryn Yammine | https://fairdomhub.org/sops/833 | R719C_3-1_e | Shoulders Lab | CEL-250605SHO-47 | polyA RNA | Snap-frozen | 10 | ng | TRIzol (Invitrogen) + Direct-zol RNA Microprep kit (Zymo Research) | Fragment Analyzer |
| RNA-250605SHO-6 | D21-157042 973 | Kathryn Yammine | https://fairdomhub.org/sops/833 | R719C_3-2_e | Shoulders Lab | CEL-250605SHO-48 | polyA RNA | Snap-frozen | 10 | ng | TRIzol (Invitrogen) + Direct-zol RNA Microprep kit (Zymo Research) | Fragment Analyzer |
| RNA-250605SHO-7 | D21-157085 406 | Kathryn Yammine | https://fairdomhub.org/sops/833 | R719C_1-1_l | Shoulders Lab | CEL-250605SHO-49 | polyA RNA | Snap-frozen | 10 | ng | TRIzol (Invitrogen) + Direct-zol RNA Microprep kit (Zymo Research) | Fragment Analyzer |
| RNA-250605SHO-8 | D21-157086 407 | Kathryn Yammine | https://fairdomhub.org/sops/833 | R719C_1-2_l | Shoulders Lab | CEL-250605SHO-50 | polyA RNA | Snap-frozen | 10 | ng | TRIzol (Invitrogen) + Direct-zol RNA Microprep kit (Zymo Research) | Fragment Analyzer |
| RNA-250605SHO-9 | D21-157087 408 | Kathryn Yammine | https://fairdomhub.org/sops/833 | R719C_1-3_l | Shoulders Lab | CEL-250605SHO-51 | polyA RNA | Snap-frozen | 10 | ng | TRIzol (Invitrogen) + Direct-zol RNA Microprep kit (Zymo Research) | Fragment Analyzer |
| RNA-250605SHO-10 | D21-157088 409 | Kathryn Yammine | https://fairdomhub.org/sops/833 | R719C_1-4_l | Shoulders Lab | CEL-250605SHO-52 | polyA RNA | Snap-frozen | 10 | ng | TRIzol (Invitrogen) + Direct-zol RNA Microprep kit (Zymo Research) | Fragment Analyzer |
| RNA-250605SHO-11 | D21-157089 691 | Kathryn Yammine | https://fairdomhub.org/sops/833 | R719C_2-1_l | Shoulders Lab | CEL-250605SHO-53 | polyA RNA | Snap-frozen | 10 | ng | TRIzol (Invitrogen) + Direct-zol RNA Microprep kit (Zymo Research) | Fragment Analyzer |
| RNA-250605SHO-12 | D21-157090 692 | Kathryn Yammine | https://fairdomhub.org/sops/833 | R719C_2-2_l | Shoulders Lab | CEL-250605SHO-54 | polyA RNA | Snap-frozen | 10 | ng | TRIzol (Invitrogen) + Direct-zol RNA Microprep kit (Zymo Research) | Fragment Analyzer |
| RNA-250605SHO-13 | D21-157091 693 | Kathryn Yammine | https://fairdomhub.org/sops/833 | R719C_2-3_l | Shoulders Lab | CEL-250605SHO-55 | polyA RNA | Snap-frozen | 10 | ng | TRIzol (Invitrogen) + Direct-zol RNA Microprep kit (Zymo Research) | Fragment Analyzer |
| RNA-250605SHO-14 | D21-157092 694 | Kathryn Yammine | https://fairdomhub.org/sops/833 | R719C_2-4_l | Shoulders Lab | CEL-250605SHO-56 | polyA RNA | Snap-frozen | 10 | ng | TRIzol (Invitrogen) + Direct-zol RNA Microprep kit (Zymo Research) | Fragment Analyzer |
| RNA-250605SHO-15 | D21-157093 988 | Kathryn Yammine | https://fairdomhub.org/sops/833 | R719C_3-1_l | Shoulders Lab | CEL-250605SHO-57 | polyA RNA | Snap-frozen | 10 | ng | TRIzol (Invitrogen) + Direct-zol RNA Microprep kit (Zymo Research) | Fragment Analyzer |
| RNA-250605SHO-16 | D21-157094 989 | Kathryn Yammine | https://fairdomhub.org/sops/833 | R719C_3-2_l | Shoulders Lab | CEL-250605SHO-58 | polyA RNA | Snap-frozen | 10 | ng | TRIzol (Invitrogen) + Direct-zol RNA Microprep kit (Zymo Research) | Fragment Analyzer |
| RNA-250605SHO-17 | D21-157095 990 | Kathryn Yammine | https://fairdomhub.org/sops/833 | R719C_3-3_l | Shoulders Lab | CEL-250605SHO-59 | polyA RNA | Snap-frozen | 10 | ng | TRIzol (Invitrogen) + Direct-zol RNA Microprep kit (Zymo Research) | Fragment Analyzer |
| RNA-250605SHO-18 | D21-157096 991 | Kathryn Yammine | https://fairdomhub.org/sops/833 | R719C_3-4_l | Shoulders Lab | CEL-250605SHO-60 | polyA RNA | Snap-frozen | 10 | ng | TRIzol (Invitrogen) + Direct-zol RNA Microprep kit (Zymo Research) | Fragment Analyzer |
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| UID | Name | Protocol | Scientist | Parent | Type | NumPrepCycles | Barcode | LibraryPrepProtocol | QC_Instrument | VolumeUnits | ExtractionMethod |
| DNA-250605SHO-1 | D21-157037 390 | https://fairdomhub.org/sops/833 | MIT BioMicroCenter | RNA-250605SHO-1 | cDNA | 8 | 6 bp sample barcode + UMI (IDT) | Oligo(dT)-primed, UMI-based 3′ RNA-Seq (3′DGE) library preparation | Fragment Analyzer | ng | TRIzol (Invitrogen) + Direct-zol RNA Microprep kit (Zymo Research) |
| DNA-250605SHO-2 | D21-157038 391 | https://fairdomhub.org/sops/833 | MIT BioMicroCenter | RNA-250605SHO-2 | cDNA | 8 | 6 bp sample barcode + UMI (IDT) | Oligo(dT)-primed, UMI-based 3′ RNA-Seq (3′DGE) library preparation | Fragment Analyzer | ng | TRIzol (Invitrogen) + Direct-zol RNA Microprep kit (Zymo Research) |
| DNA-250605SHO-3 | D21-157039 675 | https://fairdomhub.org/sops/833 | MIT BioMicroCenter | RNA-250605SHO-3 | cDNA | 8 | 6 bp sample barcode + UMI (IDT) | Oligo(dT)-primed, UMI-based 3′ RNA-Seq (3′DGE) library preparation | Fragment Analyzer | ng | TRIzol (Invitrogen) + Direct-zol RNA Microprep kit (Zymo Research) |
| DNA-250605SHO-4 | D21-157040 676 | https://fairdomhub.org/sops/833 | MIT BioMicroCenter | RNA-250605SHO-4 | cDNA | 8 | 6 bp sample barcode + UMI (IDT) | Oligo(dT)-primed, UMI-based 3′ RNA-Seq (3′DGE) library preparation | Fragment Analyzer | ng | TRIzol (Invitrogen) + Direct-zol RNA Microprep kit (Zymo Research) |
| DNA-250605SHO-5 | D21-157041 972 | https://fairdomhub.org/sops/833 | MIT BioMicroCenter | RNA-250605SHO-5 | cDNA | 8 | 6 bp sample barcode + UMI (IDT) | Oligo(dT)-primed, UMI-based 3′ RNA-Seq (3′DGE) library preparation | Fragment Analyzer | ng | TRIzol (Invitrogen) + Direct-zol RNA Microprep kit (Zymo Research) |
| DNA-250605SHO-6 | D21-157042 973 | https://fairdomhub.org/sops/833 | MIT BioMicroCenter | RNA-250605SHO-6 | cDNA | 8 | 6 bp sample barcode + UMI (IDT) | Oligo(dT)-primed, UMI-based 3′ RNA-Seq (3′DGE) library preparation | Fragment Analyzer | ng | TRIzol (Invitrogen) + Direct-zol RNA Microprep kit (Zymo Research) |
| DNA-250605SHO-7 | D21-157085 406 | https://fairdomhub.org/sops/833 | MIT BioMicroCenter | RNA-250605SHO-7 | cDNA | 8 | 6 bp sample barcode + UMI (IDT) | Oligo(dT)-primed, UMI-based 3′ RNA-Seq (3′DGE) library preparation | Fragment Analyzer | ng | TRIzol (Invitrogen) + Direct-zol RNA Microprep kit (Zymo Research) |
| DNA-250605SHO-8 | D21-157086 407 | https://fairdomhub.org/sops/833 | MIT BioMicroCenter | RNA-250605SHO-8 | cDNA | 8 | 6 bp sample barcode + UMI (IDT) | Oligo(dT)-primed, UMI-based 3′ RNA-Seq (3′DGE) library preparation | Fragment Analyzer | ng | TRIzol (Invitrogen) + Direct-zol RNA Microprep kit (Zymo Research) |
| DNA-250605SHO-9 | D21-157087 408 | https://fairdomhub.org/sops/833 | MIT BioMicroCenter | RNA-250605SHO-9 | cDNA | 8 | 6 bp sample barcode + UMI (IDT) | Oligo(dT)-primed, UMI-based 3′ RNA-Seq (3′DGE) library preparation | Fragment Analyzer | ng | TRIzol (Invitrogen) + Direct-zol RNA Microprep kit (Zymo Research) |
| DNA-250605SHO-10 | D21-157088 409 | https://fairdomhub.org/sops/833 | MIT BioMicroCenter | RNA-250605SHO-10 | cDNA | 8 | 6 bp sample barcode + UMI (IDT) | Oligo(dT)-primed, UMI-based 3′ RNA-Seq (3′DGE) library preparation | Fragment Analyzer | ng | TRIzol (Invitrogen) + Direct-zol RNA Microprep kit (Zymo Research) |
| DNA-250605SHO-11 | D21-157089 691 | https://fairdomhub.org/sops/833 | MIT BioMicroCenter | RNA-250605SHO-11 | cDNA | 8 | 6 bp sample barcode + UMI (IDT) | Oligo(dT)-primed, UMI-based 3′ RNA-Seq (3′DGE) library preparation | Fragment Analyzer | ng | TRIzol (Invitrogen) + Direct-zol RNA Microprep kit (Zymo Research) |
| DNA-250605SHO-12 | D21-157090 692 | https://fairdomhub.org/sops/833 | MIT BioMicroCenter | RNA-250605SHO-12 | cDNA | 8 | 6 bp sample barcode + UMI (IDT) | Oligo(dT)-primed, UMI-based 3′ RNA-Seq (3′DGE) library preparation | Fragment Analyzer | ng | TRIzol (Invitrogen) + Direct-zol RNA Microprep kit (Zymo Research) |
| DNA-250605SHO-13 | D21-157091 693 | https://fairdomhub.org/sops/833 | MIT BioMicroCenter | RNA-250605SHO-13 | cDNA | 8 | 6 bp sample barcode + UMI (IDT) | Oligo(dT)-primed, UMI-based 3′ RNA-Seq (3′DGE) library preparation | Fragment Analyzer | ng | TRIzol (Invitrogen) + Direct-zol RNA Microprep kit (Zymo Research) |
| DNA-250605SHO-14 | D21-157092 694 | https://fairdomhub.org/sops/833 | MIT BioMicroCenter | RNA-250605SHO-14 | cDNA | 8 | 6 bp sample barcode + UMI (IDT) | Oligo(dT)-primed, UMI-based 3′ RNA-Seq (3′DGE) library preparation | Fragment Analyzer | ng | TRIzol (Invitrogen) + Direct-zol RNA Microprep kit (Zymo Research) |
| DNA-250605SHO-15 | D21-157093 988 | https://fairdomhub.org/sops/833 | MIT BioMicroCenter | RNA-250605SHO-15 | cDNA | 8 | 6 bp sample barcode + UMI (IDT) | Oligo(dT)-primed, UMI-based 3′ RNA-Seq (3′DGE) library preparation | Fragment Analyzer | ng | TRIzol (Invitrogen) + Direct-zol RNA Microprep kit (Zymo Research) |
| DNA-250605SHO-16 | D21-157094 989 | https://fairdomhub.org/sops/833 | MIT BioMicroCenter | RNA-250605SHO-16 | cDNA | 8 | 6 bp sample barcode + UMI (IDT) | Oligo(dT)-primed, UMI-based 3′ RNA-Seq (3′DGE) library preparation | Fragment Analyzer | ng | TRIzol (Invitrogen) + Direct-zol RNA Microprep kit (Zymo Research) |
| DNA-250605SHO-17 | D21-157095 990 | https://fairdomhub.org/sops/833 | MIT BioMicroCenter | RNA-250605SHO-17 | cDNA | 8 | 6 bp sample barcode + UMI (IDT) | Oligo(dT)-primed, UMI-based 3′ RNA-Seq (3′DGE) library preparation | Fragment Analyzer | ng | TRIzol (Invitrogen) + Direct-zol RNA Microprep kit (Zymo Research) |
| DNA-250605SHO-18 | D21-157096 991 | https://fairdomhub.org/sops/833 | MIT BioMicroCenter | RNA-250605SHO-18 | cDNA | 8 | 6 bp sample barcode + UMI (IDT) | Oligo(dT)-primed, UMI-based 3′ RNA-Seq (3′DGE) library preparation | Fragment Analyzer | ng | TRIzol (Invitrogen) + Direct-zol RNA Microprep kit (Zymo Research) |
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| UID | File_PrimaryData | File_SecondaryData | Protocol | Scientist | Link_PrimaryData | Link_SecondaryData | Checksum_PrimaryData | Checksum_SecondaryData | Parent | DataType | SequencingType | Sequencer | F_bp | R_bp | LibraryStrategy | LibrarySource | LibrarySelection | LibraryDesign | Accession | Repository |
| D.SEQ-250605SHO-1 | 210322Sho_D21-157037_sequence_1.fastq.gz | 210322Sho_D21-157037_sequence_2.fastq.gz | https://fairdomhub.org/sops/833 | MIT BioMicro Center | https://www.ncbi.nlm.nih.gov/projects/gap/cgi-bin/study.cgi?study_id=phs004112.v1.p1 | https://www.ncbi.nlm.nih.gov/projects/gap/cgi-bin/study.cgi?study_id=phs004112.v1.p1 | c0e07491f6e7d6af34f026073eb9a57f | bac4b5daf38ac3d2d038f67e5c223315 | DNA-250605SHO-1 | FASTQ | ShortRead | Illumina NextSeq500 | 20 | 57 | RNA-Seq | TRANSCRIPTOMIC | RT-PCR | paired | phs004112.v1.p1 | dbGaP |
| D.SEQ-250605SHO-2 | 210322Sho_D21-157038_sequence_1.fastq.gz | 210322Sho_D21-157038_sequence_2.fastq.gz | https://fairdomhub.org/sops/833 | MIT BioMicro Center | https://www.ncbi.nlm.nih.gov/projects/gap/cgi-bin/study.cgi?study_id=phs004112.v1.p1 | https://www.ncbi.nlm.nih.gov/projects/gap/cgi-bin/study.cgi?study_id=phs004112.v1.p1 | a4709cbb3e6e102eb053d6f3294165d9 | c5fc1ac05da3a03a987ff3aa2f2e196f | DNA-250605SHO-2 | FASTQ | ShortRead | Illumina NextSeq500 | 20 | 57 | RNA-Seq | TRANSCRIPTOMIC | RT-PCR | paired | phs004112.v1.p1 | dbGaP |
| D.SEQ-250605SHO-3 | 210322Sho_D21-157039_sequence_1.fastq.gz | 210322Sho_D21-157039_sequence_2.fastq.gz | https://fairdomhub.org/sops/833 | MIT BioMicro Center | https://www.ncbi.nlm.nih.gov/projects/gap/cgi-bin/study.cgi?study_id=phs004112.v1.p1 | https://www.ncbi.nlm.nih.gov/projects/gap/cgi-bin/study.cgi?study_id=phs004112.v1.p1 | 4d3b45e9903a9e951e43ef72db67af04 | 0acf0f08fd1fcc6da9104b670e1a7437 | DNA-250605SHO-3 | FASTQ | ShortRead | Illumina NextSeq500 | 20 | 57 | RNA-Seq | TRANSCRIPTOMIC | RT-PCR | paired | phs004112.v1.p1 | dbGaP |
| D.SEQ-250605SHO-4 | 210322Sho_D21-157040_sequence_1.fastq.gz | 210322Sho_D21-157040_sequence_2.fastq.gz | https://fairdomhub.org/sops/833 | MIT BioMicro Center | https://www.ncbi.nlm.nih.gov/projects/gap/cgi-bin/study.cgi?study_id=phs004112.v1.p1 | https://www.ncbi.nlm.nih.gov/projects/gap/cgi-bin/study.cgi?study_id=phs004112.v1.p1 | 6e4fc3cbf4d0b9859308d9163f085d60 | 21c78e73b554f07e84e2878991957571 | DNA-250605SHO-4 | FASTQ | ShortRead | Illumina NextSeq500 | 20 | 57 | RNA-Seq | TRANSCRIPTOMIC | RT-PCR | paired | phs004112.v1.p1 | dbGaP |
| D.SEQ-250605SHO-5 | 210322Sho_D21-157041_sequence_1.fastq.gz | 210322Sho_D21-157041_sequence_2.fastq.gz | https://fairdomhub.org/sops/833 | MIT BioMicro Center | https://www.ncbi.nlm.nih.gov/projects/gap/cgi-bin/study.cgi?study_id=phs004112.v1.p1 | https://www.ncbi.nlm.nih.gov/projects/gap/cgi-bin/study.cgi?study_id=phs004112.v1.p1 | 3c36fbf1c1b95828a01560eac2862891 | 1ef4688cc99c5a3e74cd9d94c20af0cd | DNA-250605SHO-5 | FASTQ | ShortRead | Illumina NextSeq500 | 20 | 57 | RNA-Seq | TRANSCRIPTOMIC | RT-PCR | paired | phs004112.v1.p1 | dbGaP |
| D.SEQ-250605SHO-6 | 210322Sho_D21-157042_sequence_1.fastq.gz | 210322Sho_D21-157042_sequence_2.fastq.gz | https://fairdomhub.org/sops/833 | MIT BioMicro Center | https://www.ncbi.nlm.nih.gov/projects/gap/cgi-bin/study.cgi?study_id=phs004112.v1.p1 | https://www.ncbi.nlm.nih.gov/projects/gap/cgi-bin/study.cgi?study_id=phs004112.v1.p1 | df105ccbc434754e17e91d854807d9ea | dec825788163acd58691b7b0c3fed5af | DNA-250605SHO-6 | FASTQ | ShortRead | Illumina NextSeq500 | 20 | 57 | RNA-Seq | TRANSCRIPTOMIC | RT-PCR | paired | phs004112.v1.p1 | dbGaP |
| D.SEQ-250605SHO-7 | 210322Sho_D21-157085_sequence_1.fastq.gz | 210322Sho_D21-157085_sequence_2.fastq.gz | https://fairdomhub.org/sops/833 | MIT BioMicro Center | https://www.ncbi.nlm.nih.gov/projects/gap/cgi-bin/study.cgi?study_id=phs004112.v1.p1 | https://www.ncbi.nlm.nih.gov/projects/gap/cgi-bin/study.cgi?study_id=phs004112.v1.p1 | 728d6d8b669008fdaf186683cb06440c | d6b2f86a6e90605ec1ba8a94b6401e9c | DNA-250605SHO-7 | FASTQ | ShortRead | Illumina NextSeq500 | 20 | 57 | RNA-Seq | TRANSCRIPTOMIC | RT-PCR | paired | phs004112.v1.p1 | dbGaP |
| D.SEQ-250605SHO-8 | 210322Sho_D21-157086_sequence_1.fastq.gz | 210322Sho_D21-157086_sequence_2.fastq.gz | https://fairdomhub.org/sops/833 | MIT BioMicro Center | https://www.ncbi.nlm.nih.gov/projects/gap/cgi-bin/study.cgi?study_id=phs004112.v1.p1 | https://www.ncbi.nlm.nih.gov/projects/gap/cgi-bin/study.cgi?study_id=phs004112.v1.p1 | 381db7b85fba07441d1ba30a2bd64d73 | 0c2d539c1305602d49d69c48c38dbb88 | DNA-250605SHO-8 | FASTQ | ShortRead | Illumina NextSeq500 | 20 | 57 | RNA-Seq | TRANSCRIPTOMIC | RT-PCR | paired | phs004112.v1.p1 | dbGaP |
| D.SEQ-250605SHO-9 | 210322Sho_D21-157087_sequence_1.fastq.gz | 210322Sho_D21-157087_sequence_2.fastq.gz | https://fairdomhub.org/sops/833 | MIT BioMicro Center | https://www.ncbi.nlm.nih.gov/projects/gap/cgi-bin/study.cgi?study_id=phs004112.v1.p1 | https://www.ncbi.nlm.nih.gov/projects/gap/cgi-bin/study.cgi?study_id=phs004112.v1.p1 | 95484928f4c59ffef15dd7e4d43414cc | ccfb5a71195370e4012565f754ed98d0 | DNA-250605SHO-9 | FASTQ | ShortRead | Illumina NextSeq500 | 20 | 57 | RNA-Seq | TRANSCRIPTOMIC | RT-PCR | paired | phs004112.v1.p1 | dbGaP |
| D.SEQ-250605SHO-10 | 210322Sho_D21-157088_sequence_1.fastq.gz | 210322Sho_D21-157088_sequence_2.fastq.gz | https://fairdomhub.org/sops/833 | MIT BioMicro Center | https://www.ncbi.nlm.nih.gov/projects/gap/cgi-bin/study.cgi?study_id=phs004112.v1.p1 | https://www.ncbi.nlm.nih.gov/projects/gap/cgi-bin/study.cgi?study_id=phs004112.v1.p1 | 176c8b2ab0552abe4f4a9f5ec6e37748 | de8748f85a72bf769dadde86e043cb80 | DNA-250605SHO-10 | FASTQ | ShortRead | Illumina NextSeq500 | 20 | 57 | RNA-Seq | TRANSCRIPTOMIC | RT-PCR | paired | phs004112.v1.p1 | dbGaP |
| D.SEQ-250605SHO-11 | 210322Sho_D21-157089_sequence_1.fastq.gz | 210322Sho_D21-157089_sequence_2.fastq.gz | https://fairdomhub.org/sops/833 | MIT BioMicro Center | https://www.ncbi.nlm.nih.gov/projects/gap/cgi-bin/study.cgi?study_id=phs004112.v1.p1 | https://www.ncbi.nlm.nih.gov/projects/gap/cgi-bin/study.cgi?study_id=phs004112.v1.p1 | 2d7de05b255b6b76968f9a558c02112c | 832d4ff411b436f52a29a6f5634e3762 | DNA-250605SHO-11 | FASTQ | ShortRead | Illumina NextSeq500 | 20 | 57 | RNA-Seq | TRANSCRIPTOMIC | RT-PCR | paired | phs004112.v1.p1 | dbGaP |
| D.SEQ-250605SHO-12 | 210322Sho_D21-157090_sequence_1.fastq.gz | 210322Sho_D21-157090_sequence_2.fastq.gz | https://fairdomhub.org/sops/833 | MIT BioMicro Center | https://www.ncbi.nlm.nih.gov/projects/gap/cgi-bin/study.cgi?study_id=phs004112.v1.p1 | https://www.ncbi.nlm.nih.gov/projects/gap/cgi-bin/study.cgi?study_id=phs004112.v1.p1 | 53724aa13cef013df38d3f01ffe39e74 | 83f0c1c414a80210bec6a3305c606070 | DNA-250605SHO-12 | FASTQ | ShortRead | Illumina NextSeq500 | 20 | 57 | RNA-Seq | TRANSCRIPTOMIC | RT-PCR | paired | phs004112.v1.p1 | dbGaP |
| D.SEQ-250605SHO-13 | 210322Sho_D21-157091_sequence_1.fastq.gz | 210322Sho_D21-157091_sequence_2.fastq.gz | https://fairdomhub.org/sops/833 | MIT BioMicro Center | https://www.ncbi.nlm.nih.gov/projects/gap/cgi-bin/study.cgi?study_id=phs004112.v1.p1 | https://www.ncbi.nlm.nih.gov/projects/gap/cgi-bin/study.cgi?study_id=phs004112.v1.p1 | 9ed163f950d38fc7e40bc79ebacf0e9d | 1d11ed4df566d978918d09100bdcde3b | DNA-250605SHO-13 | FASTQ | ShortRead | Illumina NextSeq500 | 20 | 57 | RNA-Seq | TRANSCRIPTOMIC | RT-PCR | paired | phs004112.v1.p1 | dbGaP |
| D.SEQ-250605SHO-14 | 210322Sho_D21-157092_sequence_1.fastq.gz | 210322Sho_D21-157092_sequence_2.fastq.gz | https://fairdomhub.org/sops/833 | MIT BioMicro Center | https://www.ncbi.nlm.nih.gov/projects/gap/cgi-bin/study.cgi?study_id=phs004112.v1.p1 | https://www.ncbi.nlm.nih.gov/projects/gap/cgi-bin/study.cgi?study_id=phs004112.v1.p1 | f936ab7a7940ffa21a144f8494a2e73f | eb4069b48d1139a73f6a6c218ad0d204 | DNA-250605SHO-14 | FASTQ | ShortRead | Illumina NextSeq500 | 20 | 57 | RNA-Seq | TRANSCRIPTOMIC | RT-PCR | paired | phs004112.v1.p1 | dbGaP |
| D.SEQ-250605SHO-15 | 210322Sho_D21-157093_sequence_1.fastq.gz | 210322Sho_D21-157093_sequence_2.fastq.gz | https://fairdomhub.org/sops/833 | MIT BioMicro Center | https://www.ncbi.nlm.nih.gov/projects/gap/cgi-bin/study.cgi?study_id=phs004112.v1.p1 | https://www.ncbi.nlm.nih.gov/projects/gap/cgi-bin/study.cgi?study_id=phs004112.v1.p1 | 3586b15922543f6f36912e8fa748c5e3 | b3d62d0880f7d8b0bee88c4cd1f57475 | DNA-250605SHO-15 | FASTQ | ShortRead | Illumina NextSeq500 | 20 | 57 | RNA-Seq | TRANSCRIPTOMIC | RT-PCR | paired | phs004112.v1.p1 | dbGaP |
| D.SEQ-250605SHO-16 | 210322Sho_D21-157094_sequence_1.fastq.gz | 210322Sho_D21-157094_sequence_2.fastq.gz | https://fairdomhub.org/sops/833 | MIT BioMicro Center | https://www.ncbi.nlm.nih.gov/projects/gap/cgi-bin/study.cgi?study_id=phs004112.v1.p1 | https://www.ncbi.nlm.nih.gov/projects/gap/cgi-bin/study.cgi?study_id=phs004112.v1.p1 | 4490c084a27f8d30f376f1e1743562bf | ac88d43e1587bda2517e7d9f3b27a4d9 | DNA-250605SHO-16 | FASTQ | ShortRead | Illumina NextSeq500 | 20 | 57 | RNA-Seq | TRANSCRIPTOMIC | RT-PCR | paired | phs004112.v1.p1 | dbGaP |
| D.SEQ-250605SHO-17 | 210322Sho_D21-157095_sequence_1.fastq.gz | 210322Sho_D21-157095_sequence_2.fastq.gz | https://fairdomhub.org/sops/833 | MIT BioMicro Center | https://www.ncbi.nlm.nih.gov/projects/gap/cgi-bin/study.cgi?study_id=phs004112.v1.p1 | https://www.ncbi.nlm.nih.gov/projects/gap/cgi-bin/study.cgi?study_id=phs004112.v1.p1 | b56fae3eccd8c435b6517b5ba047e6f5 | 54b33fac09ac0796e2bca39016bc65ae | DNA-250605SHO-17 | FASTQ | ShortRead | Illumina NextSeq500 | 20 | 57 | RNA-Seq | TRANSCRIPTOMIC | RT-PCR | paired | phs004112.v1.p1 | dbGaP |
| D.SEQ-250605SHO-18 | 210322Sho_D21-157096_sequence_1.fastq.gz | 210322Sho_D21-157096_sequence_2.fastq.gz | https://fairdomhub.org/sops/833 | MIT BioMicro Center | https://www.ncbi.nlm.nih.gov/projects/gap/cgi-bin/study.cgi?study_id=phs004112.v1.p1 | https://www.ncbi.nlm.nih.gov/projects/gap/cgi-bin/study.cgi?study_id=phs004112.v1.p1 | 05d5a4edd8416cc73c85c0bca0387846 | 02414dcf8597c51d78c7123cde20f882 | DNA-250605SHO-18 | FASTQ | ShortRead | Illumina NextSeq500 | 20 | 57 | RNA-Seq | TRANSCRIPTOMIC | RT-PCR | paired | phs004112.v1.p1 | dbGaP |
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| UID | File_PrimaryData | Link_PrimaryData | Scientist | Parent | Protocol | ReferenceGenome | Checksum_PrimaryData | DataType | Notes | Software | Accession |
| A.GEX-250605SHO-1 | GSE271431_Gene_expression_counts_R219C.csv.gz | https://www.ncbi.nlm.nih.gov/geo/download/?acc=GSE271431&format=file&file=GSE271431%5FGene%5Fexpression%5Fcounts%5FR219C%2Ecsv%2Egz | Vincent Butty | D.SEQ-250605SHO-1; D.SEQ-250605SHO-2; D.SEQ-250605SHO-3; D.SEQ-250605SHO-4; D.SEQ-250605SHO-5; D.SEQ-250605SHO-6; D.SEQ-250605SHO-7; D.SEQ-250605SHO-8; D.SEQ-250605SHO-9; D.SEQ-250605SHO-10; D.SEQ-250605SHO-11; D.SEQ-250605SHO-12; D.SEQ-250605SHO-13; D.SEQ-250605SHO-14; D.SEQ-250605SHO-15; D.SEQ-250605SHO-16; D.SEQ-250605SHO-17; D.SEQ-250605SHO-18 | https://fairdomhub.org/sops/833 | GRCh38/ENSEMBL 101 | 7e2c584506756d0344848ba29f45ec60 | CSV | Raw gene level counts | Salmon v1.3, DESeq2, GSEA v4.1, tximport | GSE271431 |
| A.GEX-250605SHO-2 | GSE271431_Gene_expression_log2TPMs_R219C.csv.gz | https://www.ncbi.nlm.nih.gov/geo/download/?acc=GSE271431&format=file&file=GSE271431%5FGene%5Fexpression%5Flog2TPMs%5FR219C%2Ecsv%2Egz | Vincent Butty | D.SEQ-250605SHO-1; D.SEQ-250605SHO-2; D.SEQ-250605SHO-3; D.SEQ-250605SHO-4; D.SEQ-250605SHO-5; D.SEQ-250605SHO-6; D.SEQ-250605SHO-7; D.SEQ-250605SHO-8; D.SEQ-250605SHO-9; D.SEQ-250605SHO-10; D.SEQ-250605SHO-11; D.SEQ-250605SHO-12; D.SEQ-250605SHO-13; D.SEQ-250605SHO-14; D.SEQ-250605SHO-15; D.SEQ-250605SHO-16; D.SEQ-250605SHO-17; D.SEQ-250605SHO-18 | https://fairdomhub.org/sops/833 | GRCh38/ENSEMBL 101 | 83b17aafbe1c1bc1713ef34d8575b6aa | CSV | log2 transformed transcripts per million values | Salmon v1.3, DESeq2, GSEA v4.1, tximport | GSE271431 |
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| UID | File_PrimaryData | Link_PrimaryData | Parent | SampleCreationDate | Protocol | Method | Instrument | Scientist | Repository | RepositoryID | PRIDE_FileType | PRIDE_ExperimentType | PRIDE_Modification | PRIDE_Quantification | MetadataFile | ScanFile | Software | Identification |
| D.MSP-250606SHO-1 | f.MSV000096151/raw/rs240609_1505_KY_10plex_01.raw | ftp://massive-ftp.ucsd.edu/v07/MSV000096151/ | CEL-250606SHO-2; CEL-250606SHO-3 | 2024-06-09T0:0:0+0000 | https://fairdomhub.org/sops/835 | LC-MS/MS | Orbitrap Eclipse Tribrid (Thermo Scientific) | Kathryn Yammine | MassIVE | MSV000096151 | Raw | Shotgun proteomics | Oxidation | TMTpro16plex | f.MSV000096151/ccms_parameters/params.xml | f.MSV000096151/ccms_metadata/ccms_peak/rs240609_1505_KY_10plex_01.mzML.scans | Proteome Discoverer 2.4 | SEQUEST |
| D.MSP-250606SHO-2 | f.MSV000096151/peak/rs240609_1505_KY_10plex_01.mzML | ftp://massive-ftp.ucsd.edu/v07/MSV000096151/ | CEL-250606SHO-2; CEL-250606SHO-3 | 2024-06-09T0:0:0+0000 | https://fairdomhub.org/sops/835 | LC-MS/MS | Orbitrap Eclipse Tribrid (Thermo Scientific) | Kathryn Yammine | MassIVE | MSV000096151 | Peak | Shotgun proteomics | Oxidation | TMTpro16plex | f.MSV000096151/ccms_parameters/params.xml | f.MSV000096151/ccms_metadata/ccms_peak/rs240609_1505_KY_10plex_01.mzML.scans | Proteome Discoverer 2.4 | SEQUEST |
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| UID | File_PrimaryData | Link_PrimaryData | Protocol | Parent | QuantificationMethod | Scientist | PRIDE_FileType | ||
| A.MSP-250606SHO-1 | f.MSV000096151/result/rs240609_1505_KY_10plex_01.mzid | ftp://massive-ftp.ucsd.edu/v07/MSV000096151/ | https://fairdomhub.org/sops/835 | D.MSP-250606SHO-1; D.MSP-250606SHO-2 | TMT 16plex Isobaric Labeling | Kathryn Yammine | RESULT | ||
| A.MSP-250606SHO-2 | f.MSV000096151/ccms_result/rs240609_1505_KY_10plex_01.mzTab | ftp://massive-ftp.ucsd.edu/v07/MSV000096151/ | https://fairdomhub.org/sops/835 | D.MSP-250606SHO-1; D.MSP-250606SHO-2 | TMT 16plex Isobaric Labeling | Kathryn Yammine | RESULT | ||
| A.MSP-250606SHO-3 | f.MSV000096151/ccms_statistics/statistics.tsv | ftp://massive-ftp.ucsd.edu/v07/MSV000096151/ | https://fairdomhub.org/sops/835 | D.MSP-250606SHO-1; D.MSP-250606SHO-2 | TMT 16plex Isobaric Labeling | Kathryn Yammine | STATISTICS | ||
