P. umsongensis GO16 ttdR KO ALE_Butyrate Whole-Genome Sequencing raw data

Version 1

Name,Minimum,Maximum,Length,# Intervals,Amino Acid Change,Change,CDS Position,CDS,gene,Codon Change,Coverage,Polymorphism Type,Protein Effect,protein_id,Variant Frequency,Variant P-Value (approximate)
C,5279225,5279226,2,1,M -> R,AT -> C,1,DUF6543 domain-containing protein CDS,,ATG -> CGC,118,Deletion,Start Codon Loss,WP_151143255.1,99.2%,0.0
GGTCCAT,4097504,4097510,6,2,SAQ -> WSM,CTGCGCA -> GGTCCAT,2,inositol monophosphatase family protein CDS,,"TCT,GCG,CAG -> TGG,TCC,ATG",223 -> 237,Substitution,Substitution,,98.7%,0.0
CA,170263,170264,2,1,G -> H,GG -> CA,4,LysR family transcriptional regulator CDS,,GGT -> CAT,344 -> 350,Substitution,Substitution,WP_057005185.1,100.0%,0.0
AGCCAT,5279228,5279233,6,1,LA -> SH,CTTGCC -> AGCCAT,4,DUF6543 domain-containing protein CDS,,"CTT,GCC -> AGC,CAT",126 -> 132,Substitution,Substitution,WP_151143255.1,96.9% -> 98.4%,0.0
A,1460845,1460845,1,1,S -> N,G -> A,5,AMP-binding protein CDS,,AGC -> AAC,446,SNP (transition),Substitution,WP_225441887.1,96.2%,0.0
G,1185526,1185526,1,1,Y -> D,T -> G,7,ltrA CDS,ltrA,TAT -> GAT,355,SNP (transversion),Substitution,WP_020800950.1,37.7%,5.9E-104
CCCC,170267,170270,4,1,RY -> PP,GTTA -> CCCC,8,LysR family transcriptional regulator CDS,,"CGT,TAT -> CCC,CCT",312 -> 330,Substitution,Substitution,WP_057005185.1,99.4%,0.0
T,1473340,1473340,1,1,,A -> T,9,AraC family transcriptional regulator CDS,,ATA -> ATT,568,SNP (transversion),None,WP_083348600.1,29.2%,2.0E-219
C,5705008,5705008,1,1,,A -> C,9,efflux RND transporter permease subunit CDS,,GCT -> GCG,509,SNP (transversion),None,WP_151143411.1,99.6%,0.0
CC,4097512,4097513,2,1,W -> P,TG -> CC,10,inositol monophosphatase family protein CDS,,TGG -> CCG,214 -> 217,Substitution,Substitution,,99.5%,0.0
T,5279235,5279235,1,1,N -> I,A -> T,11,DUF6543 domain-containing protein CDS,,AAC -> ATC,141,SNP (transversion),Substitution,WP_151143255.1,99.3%,0.0
TTAAAATATGATTCGGGGTTGTTT,170272,170295,20,5,VELHSFIQ -> LKYDSGLF,GTCGAGCTACACAGTTTTATTCAG -> TTAAAATATGATTCGGGGTTGTTT,13,LysR family transcriptional regulator CDS,,"GTC,GAG,CTA,CAC,AGT,TTT,ATT,CAG -> TTA,AAA,TAT,GAT,TCG,GGG,TTG,TTT",189 -> 294,Substitution,Substitution,WP_057005185.1,94.7% -> 98.6%,0.0
GTCGAAGCTT,4097516,4097525,10,1,DTAA -> GRSL,ACACGGCGGC -> GTCGAAGCTT,14,inositol monophosphatase family protein CDS,,"GAC,ACG,GCG,GCG -> GGT,CGA,AGC,TTG",180 -> 207,Substitution,Substitution,,97.5% -> 98.0%,0.0
AGTGGACTT,5278804,5278811,5,3,,TAAGCCTG -> AGTGGACTT,17,alpha/beta hydrolase CDS,,,127 -> 149,Insertion,Frame Shift,,99.2% -> 99.3%,0.0
TG,4097527,4097528,2,1,A -> W,GC -> TG,25,inositol monophosphatase family protein CDS,,GCG -> TGG,174 -> 177,Substitution,Substitution,,99.4%,0.0
CGCT,5278814,5278817,4,1,AY -> AA,GTAC -> CGCT,27,alpha/beta hydrolase CDS,,"GCG,TAC -> GCC,GCT",108 -> 117,Substitution,Substitution,,99.1%,0.0
GAGATT,4097530,4097535,5,2,QG -> EI,CAAGGC -> GAGATT,28,inositol monophosphatase family protein CDS,,"CAA,GGC -> GAG,ATT",151 -> 171,Substitution,Substitution,,98.0% -> 98.7%,0.0
G,1960218,1960218,1,1,K -> R,A -> G,32,AraC family transcriptional regulator CDS,,AAG -> AGG,746,SNP (transition),Substitution,WP_083348735.1,37.9%,0.0
CCCGT,5278819,5278823,4,2,QS -> PR,AGAGC -> CCCGT,32,alpha/beta hydrolase CDS,,"CAG,AGC -> CCC,CGT",95 -> 106,Substitution,Substitution,,98.9% -> 99.1%,0.0
A,1460873,1460872,0,1,,(A)2 -> (A)3,33,AMP-binding protein CDS,,,439,Insertion (tandem repeat),Frame Shift,WP_225441887.1,99.3%,0.0
TTTCTG,4097538,4097543,5,2,,GCTGGA -> TTTCTG,36,inositol monophosphatase family protein CDS,,,124 -> 142,Substitution,Truncation,,96.8% -> 97.2%,0.0
GGAA,170297,170300,4,1,VA -> GN,TCGC -> GGAA,38,LysR family transcriptional regulator CDS,,"GTC,GCC -> GGG,AAC",169 -> 183,Substitution,Substitution,WP_057005185.1,98.2% -> 98.4%,0.0
GAAGA,5278825,5278829,4,2,IG -> RR,TCGGT -> GAAGA,38,alpha/beta hydrolase CDS,,"ATC,GGT -> AGA,AGA",79 -> 91,Substitution,Substitution,,94.9% -> 95.6%,7.6E-266
A,1460880,1460880,1,1,P -> T,C -> A,40,AMP-binding protein CDS,,CCT -> ACT,442,SNP (transversion),Substitution,WP_225441887.1,95.7%,0.0
T,170302,170302,1,1,H -> Y,C -> T,43,LysR family transcriptional regulator CDS,,CAT -> TAT,159,SNP (transition),Substitution,WP_057005185.1,100.0%,0.0
GCC,5278830,5278831,1,2,,CG -> GCC,43,alpha/beta hydrolase CDS,,,72 -> 77,Insertion,Frame Shift,,31.2% -> 33.3%,2.2E-67
GC,5278830,5278831,2,1,R -> A,CG -> GC,43,alpha/beta hydrolase CDS,,CGC -> GCC,72 -> 77,Substitution,Substitution,,62.5% -> 64.9%,4.3E-155
TA,4097546,4097547,2,1,G -> V,GG -> TA,44,inositol monophosphatase family protein CDS,,GGG -> GTA,121 -> 122,Substitution,Substitution,,91.7% -> 95.1%,0.0
CGATAT,170305,170310,6,1,KG -> RY,AAGGGC -> CGATAT,46,LysR family transcriptional regulator CDS,,"AAG,GGC -> CGA,TAT",136 -> 148,Substitution,Substitution,WP_057005185.1,98.6% -> 99.3%,0.0
CA,4097548,4097550,2,2,,GCG -> CA,46,inositol monophosphatase family protein CDS,,,106 -> 114,Deletion,Frame Shift,,47.4% -> 50.9%,1.9E-113
CAT,4097548,4097550,3,1,A -> H,GCG -> CAT,46,inositol monophosphatase family protein CDS,,GCG -> CAT,106 -> 114,Substitution,Substitution,,37.7% -> 40.2%,7.2E-120
T,5278833,5278833,1,1,A -> S,G -> T,46,alpha/beta hydrolase CDS,,GCC -> TCC,68,SNP (transversion),Substitution,,35.3%,5.9E-69
CT,5278833,5278834,2,1,A -> L,GC -> CT,46,alpha/beta hydrolase CDS,,GCC -> CTC,65 -> 68,Substitution,Substitution,,58.5% -> 60.3%,2.3E-119
TA,4097551,4097552,2,1,G -> Y,GG -> TA,49,inositol monophosphatase family protein CDS,,GGT -> TAT,98 -> 101,Substitution,Substitution,,53.5% -> 55.1%,1.5E-161
ATC,4097551,4097553,3,1,G -> I,GGT -> ATC,49,inositol monophosphatase family protein CDS,,GGT -> ATC,95 -> 101,Substitution,Substitution,,31.6% -> 35.6%,4.6E-78
ACC,5278836,5278838,2,2,S -> T,TCG -> ACC,49,alpha/beta hydrolase CDS,,TCG -> ACC,63 -> 64,Substitution,Substitution,,37.5% -> 38.1%,1.6E-62
CAC,5278836,5278838,3,1,S -> H,TCG -> CAC,49,alpha/beta hydrolase CDS,,TCG -> CAC,63 -> 64,Substitution,Substitution,,57.1% -> 57.8%,1.2E-112
A,1461274,1461274,1,1,,G -> A,51,hypothetical protein CDS,,GAG -> GAA,488,SNP (transition),None,WP_225441888.1,97.3%,0.0
CGT,4097554,4097556,2,2,G -> R,GGC -> CGT,52,inositol monophosphatase family protein CDS,,GGC -> CGT,87 -> 93,Substitution,Substitution,,25.3% -> 30.1%,2.7E-58
CCG,4097554,4097556,3,1,G -> P,GGC -> CCG,52,inositol monophosphatase family protein CDS,,GGC -> CCG,87 -> 93,Substitution,Substitution,,58.1% -> 62.1%,6.5E-155
CAT,5278839,5278841,2,2,D -> H,GAC -> CAT,52,alpha/beta hydrolase CDS,,GAC -> CAT,55 -> 61,Substitution,Substitution,,50.9% -> 55.7%,3.8E-83
ATG,5278839,5278841,3,1,D -> M,GAC -> ATG,52,alpha/beta hydrolase CDS,,GAC -> ATG,55 -> 61,Substitution,Substitution,,39.3% -> 43.6%,7.4E-69
CTCTGTAAAA,170312,170321,9,2,,GCTTTGCCGC -> CTCTGTAAAA,53,LysR family transcriptional regulator CDS,,,79 -> 129,Substitution,Truncation,WP_057005185.1,100.0%,4.0E-206
GAC,1473386,1473388,2,2,N -> D,AAT -> GAC,55,AraC family transcriptional regulator CDS,,AAT -> GAC,624 -> 628,Substitution,Substitution,WP_083348600.1,33.3% -> 33.4%,6.2E-268
GAC,1960241,1960243,2,2,N -> D,AAT -> GAC,55,AraC family transcriptional regulator CDS,,AAT -> GAC,708 -> 711,Substitution,Substitution,WP_083348735.1,33.9% -> 34.3%,2.3E-316
TT,4097557,4097558,2,1,E -> L,GA -> TT,55,inositol monophosphatase family protein CDS,,GAG -> TTG,77 -> 81,Substitution,Substitution,,66.7% -> 70.1%,2.4E-170
ACC,5278842,5278844,2,2,P -> T,CCG -> ACC,55,alpha/beta hydrolase CDS,,CCG -> ACC,47 -> 51,Substitution,Substitution,,47.1% -> 51.1%,3.6E-75
GAC,5278842,5278844,3,1,P -> D,CCG -> GAC,55,alpha/beta hydrolase CDS,,CCG -> GAC,47 -> 51,Substitution,Substitution,,42.6% -> 47.1%,2.1E-67
C,5779951,5779951,1,1,,T -> C,57,aldehyde dehydrogenase family protein CDS,,TAT -> TAC,476,SNP (transition),None,WP_083349792.1,25.8%,0.0
C,4097560,4097560,1,1,V -> L,G -> C,58,inositol monophosphatase family protein CDS,,GTG -> CTG,72,SNP (transversion),Substitution,,75.0%,4.1E-173
CGAA,5278845,5278848,4,1,AL -> RM,GCGT -> CGAA,58,alpha/beta hydrolase CDS,,"GCG,TTG -> CGA,ATG",41 -> 47,Substitution,Substitution,,29.3% -> 42.6%,1.4E-39
AAAGA,5278846,5278850,5,1,AL -> ER,CGTTG -> AAAGA,59,alpha/beta hydrolase CDS,,"GCG,TTG -> GAA,AGA",36 -> 45,Substitution,Substitution,,53.3% -> 66.7%,5.9E-65
C,5779954,5779954,1,1,,A -> C,60,aldehyde dehydrogenase family protein CDS,,GGA -> GGC,485,SNP (transversion),None,WP_083349792.1,26.8%,0.0
G,1958876,1958876,1,1,G -> A,C -> G,62,alpha/beta hydrolase CDS,,GGG -> GCG,492,SNP (transversion),Substitution,WP_151141768.1,60.2%,7.2E-20
G,4097564,4097564,1,1,L -> R,T -> G,62,inositol monophosphatase family protein CDS,,CTG -> CGG,63,SNP (transversion),Substitution,,84.1%,4.0E-175
G,1456357,1456356,0,1,,(G)2 -> (G)3,64,molybdopterin cofactor-binding domain-containingprotein CDS,,,501,Insertion (tandem repeat),Frame Shift,,99.8%,0.0
TAA,4097566,4097568,2,2,,GAT -> TAA,64,inositol monophosphatase family protein CDS,,,56 -> 60,Substitution,Truncation,,80.4% -> 81.7%,4.7E-147
G,1473396,1473396,1,1,H -> R,A -> G,65,AraC family transcriptional regulator CDS,,CAT -> CGT,610,SNP (transition),Substitution,WP_083348600.1,33.9%,5.5E-289
GCG,170325,170327,3,1,AA -> AR,TGC -> GCG,66,LysR family transcriptional regulator CDS,,"GCT,GCA -> GCG,CGA",54 -> 59,Substitution,Substitution,WP_057005185.1,100.0%,1.0E-135
G,1461854,1461854,1,1,,C -> G,66,hypothetical protein CDS,,CCC -> CCG,496,SNP (transversion),None,WP_318646624.1,100.0%,4.0E-199
G,4097570,4097570,1,1,L -> R,T -> G,68,inositol monophosphatase family protein CDS,,CTC -> CGC,51,SNP (transversion),Substitution,,80.4%,5.1E-130
CCGA,5278856,5278859,4,1,LV -> LR,GGTG -> CCGA,69,alpha/beta hydrolase CDS,,"CTG,GTG -> CTC,CGA",26 -> 30,Substitution,Substitution,,61.5% -> 66.7%,1.3E-51
ATTTT,170329,170333,4,2,LN -> IF,CTGAA -> ATTTT,70,LysR family transcriptional regulator CDS,,"CTG,AAT -> ATT,TTT",21 -> 42,Substitution,Substitution,WP_057005185.1,100.0%,1.6E-38
G,1460910,1460910,1,1,R -> G,C -> G,70,AMP-binding protein CDS,,CGT -> GGT,463,SNP (transversion),Substitution,WP_225441887.1,99.1%,0.0
CCACTTATGGTT,4097572,4097583,12,1,NGAP -> PLMV,AATGGCGCACCG -> CCACTTATGGTT,70,inositol monophosphatase family protein CDS,,"AAT,GGC,GCA,CCG -> CCA,CTT,ATG,GTT",17 -> 47,Substitution,Substitution,,29.4% -> 78.7%,2.0E-15
C,1958866,1958866,1,1,,T -> C,72,alpha/beta hydrolase CDS,,CCA -> CCG,480,SNP (transition),None,WP_151141768.1,58.3%,2.1E-16
G,1460913,1460913,1,1,S -> G,A -> G,73,AMP-binding protein CDS,,AGC -> GGC,477,SNP (transition),Substitution,WP_225441887.1,98.5%,0.0
C,5278861,5278861,1,1,M -> T,T -> C,74,alpha/beta hydrolase CDS,,ATG -> ACG,18,SNP (transition),Substitution,,55.6%,4.4E-33
T,1473406,1473406,1,1,,C -> T,75,AraC family transcriptional regulator CDS,,GTC -> GTT,620,SNP (transition),None,WP_083348600.1,32.4%,4.2E-256
T,1960261,1960261,1,1,,C -> T,75,AraC family transcriptional regulator CDS,,GTC -> GTT,742,SNP (transition),None,WP_083348735.1,35.6%,0.0
AG,170335,170336,2,1,E -> R,GA -> AG,76,LysR family transcriptional regulator CDS,,GAG -> AGG,7 -> 16,Substitution,Substitution,WP_057005185.1,100.0%,5.0E-7
CTG,5278863,5278865,3,1,G -> L,GGC -> CTG,76,alpha/beta hydrolase CDS,,GGC -> CTG,13 -> 14,Substitution,Substitution,,38.5% -> 42.9%,4.1E-16
T,1460919,1460919,1,1,,C -> T,79,AMP-binding protein CDS,,CTG -> TTG,486,SNP (transition),None,WP_225441887.1,99.0%,0.0
C,1473412,1473412,1,1,,T -> C,81,AraC family transcriptional regulator CDS,,CAT -> CAC,611,SNP (transition),None,WP_083348600.1,32.9%,2.0E-277
T,1958854,1958854,1,1,,C -> T,84,alpha/beta hydrolase CDS,,ACG -> ACA,471,SNP (transition),None,WP_151141768.1,59.0%,3.3E-17
C,1460925,1460925,1,1,C -> R,T -> C,85,AMP-binding protein CDS,,TGC -> CGC,489,SNP (transition),Substitution,WP_225441887.1,99.8%,0.0
T,3370291,3370291,1,1,,G -> T,87,hypothetical protein CDS,,GCG -> GCT,422,SNP (transversion),None,WP_151142467.1,27.0%,8.1E-283
A,5779981,5779981,1,1,,G -> A,87,aldehyde dehydrogenase family protein CDS,,GCG -> GCA,536,SNP (transition),None,WP_083349792.1,35.1%,0.0
C,1960276,1960276,1,1,,T -> C,90,AraC family transcriptional regulator CDS,,TCT -> TCC,760,SNP (transition),None,WP_083348735.1,35.9%,0.0
G,5779984,5779984,1,1,,T -> G,90,aldehyde dehydrogenase family protein CDS,,CCT -> CCG,535,SNP (transversion),None,WP_083349792.1,36.3%,0.0
C,3370297,3370297,1,1,,T -> C,93,hypothetical protein CDS,,GGT -> GGC,432,SNP (transition),None,WP_151142467.1,26.4%,1.8E-281
CA,1460934,1460935,2,1,R -> Q,AG -> CA,94,AMP-binding protein CDS,,AGG -> CAG,484 -> 485,Substitution,Substitution,WP_225441887.1,98.6%,0.0
A,1461479,1461479,1,1,F -> Y,T -> A,95,AMP-binding protein CDS,,TTC -> TAC,465,SNP (transversion),Substitution,,100.0%,1.0E-279
T,3370300,3370300,1,1,,C -> T,96,hypothetical protein CDS,,GGC -> GGT,440,SNP (transition),None,WP_151142467.1,28.4%,0.0
G,5779990,5779990,1,1,,A -> G,96,aldehyde dehydrogenase family protein CDS,,AAA -> AAG,564,SNP (transition),None,WP_083349792.1,37.8%,0.0
A,7169619,7169619,1,1,,T -> A,99,DUF6396 domain-containing protein CDS,,CTT -> CTA,717,SNP (transversion),None,WP_151143968.1,36.7%,3.9E-103
G,5779994,5779994,1,1,Q -> E,C -> G,100,aldehyde dehydrogenase family protein CDS,,CAG -> GAG,580,SNP (transversion),Substitution,WP_083349792.1,40.0%,0.0
C,3370309,3370309,1,1,,T -> C,105,hypothetical protein CDS,,CGT -> CGC,463,SNP (transition),None,WP_151142467.1,33.3%,0.0
G,1958830,1958830,1,1,,C -> G,108,alpha/beta hydrolase CDS,,CTG -> CTC,481,SNP (transversion),None,WP_151141768.1,61.1%,3.6E-21
A,7169631,7169631,1,1,,G -> A,111,DUF6396 domain-containing protein CDS,,AAG -> AAA,741,SNP (transition),None,WP_151143968.1,38.9%,2.2E-198
GCG,1460953,1460955,3,1,PR -> RG,CGC -> GCG,113,AMP-binding protein CDS,,"CCG,CGG -> CGC,GGG",489 -> 494,Substitution,Substitution,WP_225441887.1,97.2% -> 97.5%,0.0
CG,5780007,5780008,2,1,N -> T,AT -> CG,113,aldehyde dehydrogenase family protein CDS,,AAT -> ACG,607 -> 612,Substitution,Substitution,WP_083349792.1,42.5% -> 42.6%,0.0
C,1473448,1473448,1,1,,T -> C,117,AraC family transcriptional regulator CDS,,TCT -> TCC,622,SNP (transition),None,WP_083348600.1,34.4%,2.1E-321
ACTC,1460958,1460960,2,2,,TCG -> ACTC,118,AMP-binding protein CDS,,,489 -> 494,Insertion,Frame Shift,WP_225441887.1,94.7% -> 95.5%,0.0
TC,1958819,1958820,2,1,S -> D,CT -> TC,118,alpha/beta hydrolase CDS,,AGC -> GAC,483 -> 489,Substitution,Substitution,WP_151141768.1,61.9% -> 62.4%,1.7E-42
T,1456412,1456411,0,1,,+T,119,molybdopterin cofactor-binding domain-containingprotein CDS,,,506,Insertion,Frame Shift,,99.0%,0.0
G,1460700,1460699,0,1,,+G,123,hypothetical protein CDS,,,569,Insertion,Frame Shift,WP_225441886.1,98.2%,0.0
G,1960309,1960309,1,1,,A -> G,123,AraC family transcriptional regulator CDS,,GAA -> GAG,818,SNP (transition),None,WP_083348735.1,34.0%,0.0
C,5780017,5780017,1,1,,A -> C,123,aldehyde dehydrogenase family protein CDS,,CCA -> CCC,647,SNP (transversion),None,WP_083349792.1,43.0%,0.0
G,1456419,1456418,0,1,,(G)2 -> (G)3,126,molybdopterin cofactor-binding domain-containingprotein CDS,,,503,Insertion (tandem repeat),Frame Shift,,100.0%,0.0
C,7169648,7169648,1,1,S -> T,G -> C,128,DUF6396 domain-containing protein CDS,,AGC -> ACC,767,SNP (transversion),Substitution,WP_151143968.1,39.6%,4.5E-270
T,1460706,1460706,1,1,,C -> T,129,hypothetical protein CDS,,GCC -> GCT,567,SNP (transition),None,WP_225441886.1,98.8%,0.0
T,1473463,1473463,1,1,,C -> T,132,AraC family transcriptional regulator CDS,,TAC -> TAT,612,SNP (transition),None,WP_083348600.1,35.8%,0.0
G,1958806,1958806,1,1,,A -> G,132,alpha/beta hydrolase CDS,,GAT -> GAC,474,SNP (transition),None,WP_151141768.1,63.3%,2.1E-45
T,1960318,1960318,1,1,,C -> T,132,AraC family transcriptional regulator CDS,,TAC -> TAT,811,SNP (transition),None,WP_083348735.1,33.3%,0.0
A,1460973,1460973,1,1,S -> T,T -> A,133,AMP-binding protein CDS,,TCC -> ACC,481,SNP (transversion),Substitution,WP_225441887.1,90.4%,0.0
C,1461357,1461356,0,1,,(C)2 -> (C)3,134,hypothetical protein CDS,,,558,Insertion (tandem repeat),Frame Shift,WP_225441888.1,99.6%,0.0
G,1958803,1958803,1,1,,A -> G,135,alpha/beta hydrolase CDS,,TTT -> TTC,477,SNP (transition),None,WP_151141768.1,62.9%,1.3E-44
C,1462373,1462372,0,1,,+C,139,enoyl-CoA hydratase/isomerase family protein CDS,,,448,Insertion,Frame Shift,WP_151141312.1,100.0%,0.0
C,1460717,1460717,1,1,W -> S,G -> C,140,hypothetical protein CDS,,TGG -> TCG,568,SNP (transversion),Substitution,WP_225441886.1,97.5%,0.0
C,1473472,1473472,1,1,,T -> C,141,AraC family transcriptional regulator CDS,,GTT -> GTC,644,SNP (transition),None,WP_083348600.1,37.9%,0.0
A,1460720,1460720,1,1,G -> D,G -> A,143,hypothetical protein CDS,,GGC -> GAC,569,SNP (transition),Substitution,WP_225441886.1,97.9%,0.0
C,1459410,1459409,0,1,,(C)2 -> (C)3,144,FAD binding domain-containing protein CDS,,,534,Insertion (tandem repeat),Frame Shift,,53.0%,3.7E-111
A,1953090,1953090,1,1,,C -> A,144,FAD binding domain-containing protein CDS,,CCC -> CCA,543,SNP (transversion),None,WP_151141760.1,61.3%,3.8E-98
TGG,2017823,2017822,0,1,G -> GG,(GGT)9 -> (GGT)10,144,hypothetical protein CDS,,"GGC -> GGT,GGC",338 -> 407,Insertion (tandem repeat),Insertion,WP_191994391.1,95.9% -> 96.8%,0.0
T,7169667,7169667,1,1,,C -> T,147,DUF6396 domain-containing protein CDS,,TTC -> TTT,767,SNP (transition),None,WP_151143968.1,41.7%,7.0E-293
TTACC,4097653,4097657,5,1,RE -> LP,CGGGA -> TTACC,151,inositol monophosphatase family protein CDS,,"CGG,GAG -> TTA,CCG",25 -> 41,Substitution,Substitution,,32.0% -> 58.5%,1.1E-22
T,7169671,7169671,1,1,T -> S,A -> T,151,DUF6396 domain-containing protein CDS,,ACG -> TCG,769,SNP (transversion),Substitution,WP_151143968.1,41.1%,3.0E-317
T,1460732,1460732,1,1,A -> V,C -> T,155,hypothetical protein CDS,,GCG -> GTG,546,SNP (transition),Substitution,WP_225441886.1,97.4%,0.0
G,1473487,1473487,1,1,,T -> G,156,AraC family transcriptional regulator CDS,,GTT -> GTG,695,SNP (transversion),None,WP_083348600.1,42.6%,0.0
G,1958782,1958782,1,1,,C -> G,156,alpha/beta hydrolase CDS,,GCG -> GCC,483,SNP (transversion),None,WP_151141768.1,63.4%,2.1E-46
G,1960342,1960342,1,1,,T -> G,156,AraC family transcriptional regulator CDS,,GTT -> GTG,740,SNP (transversion),None,WP_083348735.1,29.2%,1.5E-263
G,7169676,7169676,1,1,,C -> G,156,DUF6396 domain-containing protein CDS,,CCC -> CCG,782,SNP (transversion),None,WP_151143968.1,40.2%,2.3E-311
C,1456450,1456449,0,1,,(C)3 -> (C)4,157,molybdopterin cofactor-binding domain-containingprotein CDS,,,487,Insertion (tandem repeat),Frame Shift,,99.8%,0.0
CAG,4097659,4097661,2,2,K -> Q,AAA -> CAG,157,inositol monophosphatase family protein CDS,,AAA -> CAG,44 -> 46,Substitution,Substitution,,54.3% -> 56.8%,2.2E-75
AA,7169679,7169680,2,1,SA -> ST,CG -> AA,159,DUF6396 domain-containing protein CDS,,"TCC,GCC -> TCA,ACC",776,Substitution,Substitution,WP_151143968.1,40.5% -> 40.6%,1.2E-312
GAA,4097662,4097664,3,1,L -> E,CTG -> GAA,160,inositol monophosphatase family protein CDS,,CTG -> GAA,51 -> 56,Substitution,Substitution,,37.5% -> 41.2%,1.2E-61
GGA,4097662,4097664,3,1,L -> G,CTG -> GGA,160,inositol monophosphatase family protein CDS,,CTG -> GGA,51 -> 56,Substitution,Substitution,,25.5% -> 28.3%,2.4E-41
G,1958776,1958776,1,1,,A -> G,162,alpha/beta hydrolase CDS,,GGT -> GGC,479,SNP (transition),None,WP_151141768.1,63.5%,6.9E-70
A,4097665,4097665,1,1,L -> M,T -> A,163,inositol monophosphatase family protein CDS,,TTG -> ATG,61,SNP (transversion),Substitution,,36.1%,2.2E-61
,4097666,4097666,1,1,,-T,164,inositol monophosphatase family protein CDS,,,61,Deletion,Frame Shift,,34.4%,3.4E-37
G,1958773,1958773,1,1,,A -> G,165,alpha/beta hydrolase CDS,,TGT -> TGC,481,SNP (transition),None,WP_151141768.1,63.0%,1.5E-68
T,1960351,1960351,1,1,,C -> T,165,AraC family transcriptional regulator CDS,,AGC -> AGT,739,SNP (transition),None,WP_083348735.1,27.2%,1.0E-218
G,7169686,7169686,1,1,S -> A,T -> G,166,DUF6396 domain-containing protein CDS,,TCC -> GCC,753,SNP (transversion),Substitution,WP_151143968.1,40.1%,2.3E-299
ATA,4097669,4097671,3,1,AL -> DM,CGC -> ATA,167,inositol monophosphatase family protein CDS,,"GCG,CTG -> GAT,ATG",65 -> 71,Substitution,Substitution,,72.1% -> 73.2%,2.9E-158
G,1456463,1456462,0,1,,+G,170,molybdopterin cofactor-binding domain-containingprotein CDS,,,476,Insertion,Frame Shift,,99.8%,0.0
C,7169691,7169691,1,1,,T -> C,171,DUF6396 domain-containing protein CDS,,GAT -> GAC,769,SNP (transition),None,WP_151143968.1,39.1%,1.7E-294
TACGC,4097674,4097678,5,1,AR -> YA,GCTCG -> TACGC,172,inositol monophosphatase family protein CDS,,"GCT,CGA -> TAC,GCA",84 -> 86,Substitution,Substitution,,65.1% -> 66.7%,1.3E-173
,4097678,4097678,1,1,,-G,176,inositol monophosphatase family protein CDS,,,86,Deletion,Frame Shift,,25.6%,2.5E-44
T,5780071,5780071,1,1,,C -> T,177,aldehyde dehydrogenase family protein CDS,,GAC -> GAT,763,SNP (transition),None,WP_083349792.1,43.9%,0.0
TC,4097681,4097682,2,1,D -> V,AT -> TC,179,inositol monophosphatase family protein CDS,,GAT -> GTC,102 -> 105,Substitution,Substitution,,76.2% -> 78.4%,9.7E-265
AAC,4097683,4097685,2,2,,TAA -> AAC,181,inositol monophosphatase family protein CDS,,,109 -> 119,Substitution,Extension,,73.1% -> 79.8%,6.3E-285
C,1953937,1953937,1,1,,A -> C,183,(2Fe-2S)-binding protein CDS,,GGA -> GGC,553,SNP (transversion),None,WP_008060977.1,96.4%,0.0
C,1461024,1461024,1,1,,T -> C,184,AMP-binding protein CDS,,TTG -> CTG,493,SNP (transition),None,WP_225441887.1,35.1%,2.7E-160
,1462422,1462422,1,1,,-G,188,enoyl-CoA hydratase/isomerase family protein CDS,,,430,Deletion,Frame Shift,WP_151141312.1,99.8%,6.5E-170
T,1394154,1394154,1,1,,C -> T,189,phospholipase D-like domain-containing protein CDS,,GAC -> GAT,350,SNP (transition),None,WP_151141266.1,67.7%,5.2E-26
C,1473523,1473523,1,1,,A -> C,192,AraC family transcriptional regulator CDS,,GCA -> GCC,797,SNP (transversion),None,WP_083348600.1,48.6%,0.0
G,1953138,1953138,1,1,,A -> G,192,FAD binding domain-containing protein CDS,,GAA -> GAG,566,SNP (transition),None,WP_151141760.1,67.0%,3.2E-198
T,7169712,7169712,1,1,,C -> T,192,DUF6396 domain-containing protein CDS,,CGC -> CGT,749,SNP (transition),None,WP_151143968.1,39.5%,1.4E-262
G,1461033,1461033,1,1,N -> D,A -> G,193,AMP-binding protein CDS,,AAC -> GAC,492,SNP (transition),Substitution,WP_225441887.1,61.6%,0.0
C,3370399,3370399,1,1,,T -> C,195,hypothetical protein CDS,,AAT -> AAC,504,SNP (transition),None,WP_151142467.1,25.0%,9.3E-270
A,1461989,1461988,0,1,,(A)2 -> (A)3,201,hypothetical protein CDS,,,433,Insertion (tandem repeat),Frame Shift,WP_318646624.1,99.5%,0.0
C,1953147,1953147,1,1,K -> N,G -> C,201,FAD binding domain-containing protein CDS,,AAG -> AAC,561,SNP (transversion),Substitution,WP_151141760.1,67.2%,2.6E-269
T,1461044,1461044,1,1,,C -> T,204,AMP-binding protein CDS,,GAC -> GAT,497,SNP (transition),None,WP_225441887.1,55.1%,0.0
C,1473541,1473541,1,1,,T -> C,210,AraC family transcriptional regulator CDS,,TAT -> TAC,807,SNP (transition),None,WP_083348600.1,50.6%,0.0
T,1953159,1953159,1,1,,G -> T,213,FAD binding domain-containing protein CDS,,GCG -> GCT,551,SNP (transversion),None,WP_151141760.1,70.1%,0.0
GT,1958724,1958725,2,1,VT -> VP,TC -> GT,213,alpha/beta hydrolase CDS,,"GTG,ACC -> GTA,CCC",459 -> 463,Substitution,Substitution,WP_151141768.1,64.5% -> 64.6%,3.3E-96
T,3969599,3969599,1,1,,C -> T,213,hypothetical protein CDS,,GGC -> GGT,360,SNP (transition),None,,40.3%,1.7E-259
AAG,5780114,5780116,3,1,A -> K,GCC -> AAG,220,aldehyde dehydrogenase family protein CDS,,GCC -> AAG,701 -> 705,Substitution,Substitution,WP_083349792.1,43.1% -> 43.4%,0.0
G,1460294,1460293,0,1,,(G)3 -> (G)4,222,(2Fe-2S)-binding protein CDS,,,448,Insertion (tandem repeat),Frame Shift,,98.4%,0.0
T,3397790,3397790,1,1,A -> V,C -> T,227,hypothetical protein CDS,,GCG -> GTG,458,SNP (transition),Substitution,WP_318646620.1,88.4%,0.0
G,1953174,1953174,1,1,,A -> G,228,FAD binding domain-containing protein CDS,,GTA -> GTG,562,SNP (transition),None,WP_151141760.1,74.2%,0.0
G,4012329,4012329,1,1,,A -> G,228,gcvP CDS,gcvP,CAA -> CAG,391,SNP (transition),None,WP_151142738.1,65.7%,1.5E-108
G,5780122,5780122,1,1,,T -> G,228,aldehyde dehydrogenase family protein CDS,,TCT -> TCG,721,SNP (transversion),None,WP_083349792.1,43.3%,0.0
TG,5780124,5780125,2,1,A -> V,CC -> TG,230,aldehyde dehydrogenase family protein CDS,,GCC -> GTG,726 -> 727,Substitution,Substitution,WP_083349792.1,43.4% -> 43.5%,0.0
A,3397796,3397796,1,1,R -> Q,G -> A,233,hypothetical protein CDS,,CGG -> CAG,459,SNP (transition),Substitution,WP_318646620.1,88.2%,0.0
C,1473565,1473565,1,1,,T -> C,234,AraC family transcriptional regulator CDS,,GCT -> GCC,851,SNP (transition),None,WP_083348600.1,53.2%,0.0
A,1958704,1958704,1,1,,G -> A,234,alpha/beta hydrolase CDS,,GAC -> GAT,449,SNP (transition),None,WP_151141768.1,62.4%,1.3E-109
AC,5780130,5780131,2,1,A -> D,CG -> AC,236,aldehyde dehydrogenase family protein CDS,,GCG -> GAC,708 -> 713,Substitution,Substitution,WP_083349792.1,43.5%,0.0
T,1473568,1473568,1,1,,C -> T,237,AraC family transcriptional regulator CDS,,ACC -> ACT,855,SNP (transition),None,WP_083348600.1,52.4%,0.0
T,1396032,1396032,1,1,V -> L,G -> T,238,DUF6396 domain-containing protein CDS,,GTG -> TTG,655,SNP (transversion),Substitution,WP_151141269.1,26.0%,1.3E-116
T,7169758,7169758,1,1,V -> L,G -> T,238,DUF6396 domain-containing protein CDS,,GTG -> TTG,681,SNP (transversion),Substitution,WP_151143968.1,27.9%,1.7E-136
C,5780134,5780134,1,1,,T -> C,240,aldehyde dehydrogenase family protein CDS,,CGT -> CGC,713,SNP (transition),None,WP_083349792.1,43.2%,0.0
G,1396037,1396037,1,1,,A -> G,243,DUF6396 domain-containing protein CDS,,GAA -> GAG,665,SNP (transition),None,WP_151141269.1,27.5%,2.3E-130
C,1462477,1462477,1,1,,T -> C,243,enoyl-CoA hydratase/isomerase family protein CDS,,GGT -> GGC,480,SNP (transition),None,WP_151141312.1,40.2%,3.0E-13
T,1956061,1956061,1,1,,C -> T,243,enoyl-CoA hydratase/isomerase family protein CDS,,GGC -> GGT,443,SNP (transition),None,WP_151141764.1,80.1%,0.0
G,3686984,3686984,1,1,,A -> G,243,glutamine synthetase family protein CDS,,GGT -> GGC,497,SNP (transition),None,WP_151142592.1,99.0%,0.0
C,3969629,3969629,1,1,,T -> C,243,hypothetical protein CDS,,GCT -> GCC,344,SNP (transition),None,,30.5%,1.8E-131
TTTA,5780137,5780140,3,2,,GCTG -> TTTA,243,aldehyde dehydrogenase family protein CDS,,"TCG,CTG -> TCT,TTA",696 -> 708,Substitution,None,WP_083349792.1,42.9% -> 43.0%,0.0
T,1956064,1956064,1,1,,C -> T,246,enoyl-CoA hydratase/isomerase family protein CDS,,TTC -> TTT,450,SNP (transition),None,WP_151141764.1,78.7%,0.0
GGAG,3686978,3686981,3,2,DA -> DS,AGCA -> GGAG,246,glutamine synthetase family protein CDS,,"GAT,GCT -> GAC,TCC",494 -> 505,Substitution,Substitution,WP_151142592.1,98.2%,0.0
C,5780142,5780142,1,1,V -> A,T -> C,248,aldehyde dehydrogenase family protein CDS,,GTG -> GCG,694,SNP (transition),Substitution,WP_083349792.1,43.4%,0.0
T,1956067,1956067,1,1,,C -> T,249,enoyl-CoA hydratase/isomerase family protein CDS,,CTC -> CTT,445,SNP (transition),None,WP_151141764.1,78.2%,0.0
GGCA,3397812,3397815,3,2,EP -> EA,ACCG -> GGCA,249,hypothetical protein CDS,,"GAA,CCG -> GAG,GCA",447 -> 449,Substitution,Substitution,WP_318646620.1,82.6% -> 83.4%,0.0
G,1378665,1378665,1,1,,A -> G,252,hypothetical protein CDS,,GGT -> GGC,844,SNP (transition),None,WP_151141247.1,84.0%,0.0
G,3370459,3370459,1,1,,T -> G,255,hypothetical protein CDS,,TCT -> TCG,469,SNP (transversion),None,WP_151142467.1,51.2%,0.0
C,3686972,3686972,1,1,,T -> C,255,glutamine synthetase family protein CDS,,CGA -> CGG,497,SNP (transition),None,WP_151142592.1,99.0%,0.0
,1462491,1462491,1,1,,-G,257,enoyl-CoA hydratase/isomerase family protein CDS,,,457,Deletion,Frame Shift,WP_151141312.1,100.0%,7.9E-138
G,1953203,1953203,1,1,T -> S,C -> G,257,FAD binding domain-containing protein CDS,,ACC -> AGC,535,SNP (transversion),Substitution,WP_151141760.1,79.8%,0.0
C,3397820,3397820,1,1,I -> T,T -> C,257,hypothetical protein CDS,,ATA -> ACA,449,SNP (transition),Substitution,WP_318646620.1,81.7%,0.0
T,3370462,3370462,1,1,,C -> T,258,hypothetical protein CDS,,GAC -> GAT,464,SNP (transition),None,WP_151142467.1,49.1%,0.0
A,1956079,1956079,1,1,,G -> A,261,enoyl-CoA hydratase/isomerase family protein CDS,,CCG -> CCA,439,SNP (transition),None,WP_151141764.1,72.4%,0.0
G,1950217,1950217,1,1,,T -> G,264,molybdopterin cofactor-binding domain-containingprotein CDS,,CCT -> CCG,601,SNP (transversion),None,WP_151141759.1,99.3%,0.0
A,3397830,3397830,1,1,,G -> A,267,hypothetical protein CDS,,GAG -> GAA,439,SNP (transition),None,WP_318646620.1,80.0%,0.0
C,3686960,3686960,1,1,,T -> C,267,glutamine synthetase family protein CDS,,CCA -> CCG,500,SNP (transition),None,WP_151142592.1,99.4%,0.0
A,5934211,5934211,1,1,L -> F,C -> A,267,folK CDS,folK,TTG -> TTT,358,SNP (transversion),Substitution,WP_033043884.1,100.0%,0.0
C,1462502,1462501,0,1,,+C,268,enoyl-CoA hydratase/isomerase family protein CDS,,,470,Insertion,Frame Shift,WP_151141312.1,98.7%,6.1E-313
A,1953216,1953216,1,1,,G -> A,270,FAD binding domain-containing protein CDS,,GAG -> GAA,515,SNP (transition),None,WP_151141760.1,82.3%,0.0
G,1950226,1950226,1,1,,A -> G,273,molybdopterin cofactor-binding domain-containingprotein CDS,,GTA -> GTG,624,SNP (transition),None,WP_151141759.1,99.0%,0.0
C,1956091,1956091,1,1,,G -> C,273,enoyl-CoA hydratase/isomerase family protein CDS,,TCG -> TCC,435,SNP (transversion),None,WP_151141764.1,68.0%,0.0
C,3397836,3397836,1,1,,G -> C,273,hypothetical protein CDS,,CTG -> CTC,451,SNP (transversion),None,WP_318646620.1,77.2%,0.0
A,3686954,3686954,1,1,,G -> A,273,glutamine synthetase family protein CDS,,CCC -> CCT,500,SNP (transition),None,WP_151142592.1,98.6%,0.0
GC,3686951,3686952,2,1,D -> G,AT -> GC,275,glutamine synthetase family protein CDS,,GAT -> GGC,490 -> 491,Substitution,Substitution,WP_151142592.1,98.4% -> 98.6%,0.0
C,1466404,1466404,1,1,,A -> C,276,MFS transporter CDS,,GCA -> GCC,464,SNP (transversion),None,WP_151141315.1,88.4%,0.0
G,1950232,1950232,1,1,,A -> G,279,molybdopterin cofactor-binding domain-containingprotein CDS,,GTA -> GTG,633,SNP (transition),None,WP_151141759.1,99.4%,0.0
C,504683,504683,1,1,K -> N,A -> C,282,hypothetical protein CDS,,AAA -> AAC,493,SNP (transversion),Substitution,WP_151140605.1,100.0%,0.0
G,1378635,1378635,1,1,,A -> G,282,hypothetical protein CDS,,GCT -> GCC,854,SNP (transition),None,WP_151141247.1,77.0%,0.0
G,1466410,1466410,1,1,,A -> G,282,MFS transporter CDS,,AAA -> AAG,467,SNP (transition),None,WP_151141315.1,87.4%,0.0
C,3370486,3370486,1,1,,T -> C,282,hypothetical protein CDS,,GCT -> GCC,457,SNP (transition),None,WP_151142467.1,32.4%,5.2E-277
GA,3397845,3397846,2,1,GA -> GT,AG -> GA,282,hypothetical protein CDS,,"GGA,GCG -> GGG,ACG",460 -> 462,Substitution,Substitution,WP_318646620.1,74.8% -> 74.9%,0.0
G,1953231,1953231,1,1,,A -> G,285,FAD binding domain-containing protein CDS,,GCA -> GCG,502,SNP (transition),None,WP_151141760.1,86.1%,0.0
CG,3397850,3397851,2,1,N -> T,AT -> CG,287,hypothetical protein CDS,,AAT -> ACG,441 -> 446,Substitution,Substitution,WP_318646620.1,74.1% -> 74.4%,0.0
C,1959314,1959314,1,1,,G -> C,288,XdhC family protein CDS,,GGG -> GGC,432,SNP (transversion),None,WP_151141331.1,58.6%,3.0E-15
T,1461131,1461131,1,1,,G -> T,291,AMP-binding protein CDS,,GTG -> GTT,527,SNP (transversion),None,WP_225441887.1,87.7%,0.0
G,1953237,1953237,1,1,,A -> G,291,FAD binding domain-containing protein CDS,,GCA -> GCG,504,SNP (transition),None,WP_151141760.1,86.7%,0.0
C,1959317,1959317,1,1,,T -> C,291,XdhC family protein CDS,,GGT -> GGC,431,SNP (transition),None,WP_151141331.1,58.2%,9.4E-15
T,3397855,3397855,1,1,,C -> T,292,hypothetical protein CDS,,CTG -> TTG,440,SNP (transition),None,WP_318646620.1,73.4%,0.0
C,5780186,5780186,1,1,,T -> C,292,aldehyde dehydrogenase family protein CDS,,TTG -> CTG,698,SNP (transition),None,WP_083349792.1,49.1%,0.0
C,1396088,1396088,1,1,,T -> C,294,DUF6396 domain-containing protein CDS,,AAT -> AAC,783,SNP (transition),None,WP_151141269.1,65.3%,0.0
C,1461134,1461134,1,1,,T -> C,294,AMP-binding protein CDS,,GCT -> GCC,524,SNP (transition),None,WP_225441887.1,88.0%,0.0
G,1471787,1471787,1,1,Q -> P,T -> G,296,alpha/beta hydrolase CDS,,CAA -> CCA,422,SNP (transversion),Substitution,WP_151141328.1,63.0%,1.7E-154
T,1396091,1396091,1,1,,C -> T,297,DUF6396 domain-containing protein CDS,,ATC -> ATT,784,SNP (transition),None,WP_151141269.1,64.9%,0.0
A,1466425,1466425,1,1,,T -> A,297,MFS transporter CDS,,CGT -> CGA,476,SNP (transversion),None,WP_151141315.1,85.3%,0.0
CG,5780191,5780192,2,1,AI -> AV,AA -> CG,297,aldehyde dehydrogenase family protein CDS,,"GCA,ATC -> GCC,GTC",694 -> 698,Substitution,Substitution,WP_083349792.1,49.0%,0.0
G,1461683,1461682,0,1,,+G,299,AMP-binding protein CDS,,,586,Insertion,Frame Shift,,100.0%,4.0E-235
C,1473631,1473631,1,1,,G -> C,300,AraC family transcriptional regulator CDS,,CTG -> CTC,763,SNP (transversion),None,WP_083348600.1,49.0%,0.0
TTA,1959327,1959329,2,2,V -> L,GTG -> TTA,301,XdhC family protein CDS,,GTG -> TTA,433 -> 437,Substitution,Substitution,WP_151141331.1,58.0% -> 58.4%,9.4E-15
C,1462537,1462537,1,1,,T -> C,303,enoyl-CoA hydratase/isomerase family protein CDS,,TAT -> TAC,465,SNP (transition),None,WP_151141312.1,46.9%,2.2E-55
G,3397869,3397869,1,1,,C -> G,306,hypothetical protein CDS,,GCC -> GCG,423,SNP (transversion),None,WP_318646620.1,69.3%,0.0
A,5780201,5780201,1,1,S -> T,T -> A,307,aldehyde dehydrogenase family protein CDS,,TCC -> ACC,706,SNP (transversion),Substitution,WP_083349792.1,47.9%,0.0
,1460380,1460380,1,1,,-T,308,(2Fe-2S)-binding protein CDS,,,463,Deletion,Frame Shift,,100.0%,1.6E-278
A,1378596,1378596,1,1,,G -> A,321,hypothetical protein CDS,,GCC -> GCT,719,SNP (transition),None,WP_151141247.1,28.1%,9.3E-243
A,1471759,1471759,1,1,,G -> A,324,alpha/beta hydrolase CDS,,GGC -> GGT,452,SNP (transition),None,WP_151141328.1,71.5%,1.7E-307
C,1950277,1950277,1,1,,T -> C,324,molybdopterin cofactor-binding domain-containingprotein CDS,,CGT -> CGC,620,SNP (transition),None,WP_151141759.1,98.7%,0.0
A,5780218,5780218,1,1,,G -> A,324,aldehyde dehydrogenase family protein CDS,,AAG -> AAA,703,SNP (transition),None,WP_083349792.1,51.4%,0.0
T,1471756,1471756,1,1,,C -> T,327,alpha/beta hydrolase CDS,,GCG -> GCA,460,SNP (transition),None,WP_151141328.1,72.2%,0.0
C,1950280,1950280,1,1,,T -> C,327,molybdopterin cofactor-binding domain-containingprotein CDS,,TAT -> TAC,620,SNP (transition),None,WP_151141759.1,99.2%,0.0
G,1956145,1956145,1,1,,T -> G,327,enoyl-CoA hydratase/isomerase family protein CDS,,GTT -> GTG,459,SNP (transversion),None,WP_151141764.1,51.6%,9.6E-155
TCA,1473659,1473661,2,2,P -> S,CCG -> TCA,328,AraC family transcriptional regulator CDS,,CCG -> TCA,684 -> 695,Substitution,Substitution,WP_083348600.1,44.3%,0.0
T,1950283,1950283,1,1,,C -> T,330,molybdopterin cofactor-binding domain-containingprotein CDS,,GTC -> GTT,606,SNP (transition),None,WP_151141759.1,99.0%,0.0
A,1471750,1471750,1,1,,G -> A,333,alpha/beta hydrolase CDS,,ATC -> ATT,455,SNP (transition),None,WP_151141328.1,73.0%,0.0
C,5129438,5129438,1,1,,G -> C,333,gcvP CDS,gcvP,CCG -> CCC,381,SNP (transversion),None,WP_151143190.1,44.1%,2.3E-7
G,1299880,1299880,1,1,E -> G,A -> G,335,IS4 family transposase CDS,,GAA -> GGA,391,SNP (transition),Substitution,WP_151141195.1,75.2%,4.6E-122
G,3873702,3873702,1,1,E -> G,A -> G,335,IS4 family transposase CDS,,GAA -> GGA,390,SNP (transition),Substitution,WP_033042572.1,72.1%,1.2E-134
A,1461179,1461179,1,1,,T -> A,339,AMP-binding protein CDS,,GGT -> GGA,513,SNP (transversion),None,WP_225441887.1,95.5%,0.0
G,1471744,1471744,1,1,,A -> G,339,alpha/beta hydrolase CDS,,CTT -> CTC,477,SNP (transition),None,WP_151141328.1,74.4%,0.0
T,1956157,1956157,1,1,,C -> T,339,enoyl-CoA hydratase/isomerase family protein CDS,,GGC -> GGT,456,SNP (transition),None,WP_151141764.1,50.4%,5.6E-126
C,1466468,1466468,1,1,,T -> C,340,MFS transporter CDS,,TTG -> CTG,457,SNP (transition),None,WP_151141315.1,77.2%,0.0
C,1396136,1396136,1,1,,G -> C,342,DUF6396 domain-containing protein CDS,,GGG -> GGC,795,SNP (transversion),None,WP_151141269.1,46.8%,0.0
G,5129447,5129447,1,1,,A -> G,342,gcvP CDS,gcvP,CCA -> CCG,386,SNP (transition),None,WP_151143190.1,45.3%,1.2E-8
C,7169862,7169862,1,1,,G -> C,342,DUF6396 domain-containing protein CDS,,GGG -> GGC,621,SNP (transversion),None,WP_151143968.1,81.8%,0.0
C,1960534,1960534,1,1,,T -> C,348,AraC family transcriptional regulator CDS,,AGT -> AGC,724,SNP (transition),None,WP_083348735.1,31.8%,2.2E-290
G,3397911,3397911,1,1,,T -> G,348,hypothetical protein CDS,,TCT -> TCG,391,SNP (transversion),None,WP_318646620.1,63.2%,3.2E-167
C,1466478,1466478,1,1,V -> A,T -> C,350,MFS transporter CDS,,GTG -> GCG,454,SNP (transition),Substitution,WP_151141315.1,74.4%,0.0
C,1956169,1956169,1,1,,T -> C,351,enoyl-CoA hydratase/isomerase family protein CDS,,GGT -> GGC,459,SNP (transition),None,WP_151141764.1,49.2%,6.1E-121
C,1466480,1466480,1,1,,T -> C,352,MFS transporter CDS,,TTG -> CTG,460,SNP (transition),None,WP_151141315.1,73.9%,0.0
T,1461194,1461194,1,1,,C -> T,354,AMP-binding protein CDS,,TAC -> TAT,486,SNP (transition),None,WP_225441887.1,97.3%,0.0
T,1473692,1473692,1,1,,C -> T,361,AraC family transcriptional regulator CDS,,CTG -> TTG,638,SNP (transition),None,WP_083348600.1,40.0%,0.0
T,1461202,1461201,0,1,,+T,362,AMP-binding protein CDS,,,482,Insertion,Frame Shift,WP_225441887.1,99.2%,0.0
C,1396157,1396157,1,1,,T -> C,363,DUF6396 domain-containing protein CDS,,AGT -> AGC,767,SNP (transition),None,WP_151141269.1,47.8%,2.3E-223
C,1471720,1471720,1,1,,T -> C,363,alpha/beta hydrolase CDS,,CCA -> CCG,488,SNP (transition),None,WP_151141328.1,81.6%,0.0
C,7169883,7169883,1,1,,T -> C,363,DUF6396 domain-containing protein CDS,,AGT -> AGC,626,SNP (transition),None,WP_151143968.1,76.7%,0.0
TG,5780259,5780260,2,1,A -> V,CC -> TG,365,aldehyde dehydrogenase family protein CDS,,GCC -> GTG,676 -> 677,Substitution,Substitution,WP_083349792.1,51.3% -> 51.4%,0.0
A,1396160,1396160,1,1,,G -> A,366,DUF6396 domain-containing protein CDS,,GAG -> GAA,770,SNP (transition),None,WP_151141269.1,47.5%,5.8E-188
T,1466494,1466494,1,1,,C -> T,366,MFS transporter CDS,,CAC -> CAT,445,SNP (transition),None,WP_151141315.1,70.3%,0.0
C,1960552,1960552,1,1,,T -> C,366,AraC family transcriptional regulator CDS,,GCT -> GCC,760,SNP (transition),None,WP_083348735.1,35.1%,0.0
A,7169886,7169886,1,1,,G -> A,366,DUF6396 domain-containing protein CDS,,GAG -> GAA,623,SNP (transition),None,WP_151143968.1,75.8%,0.0
T,1396164,1396164,1,1,,C -> T,370,DUF6396 domain-containing protein CDS,,CTG -> TTG,760,SNP (transition),None,WP_151141269.1,48.3%,1.8E-191
T,7169890,7169890,1,1,,C -> T,370,DUF6396 domain-containing protein CDS,,CTG -> TTG,624,SNP (transition),None,WP_151143968.1,76.0%,0.0
C,1466499,1466499,1,1,V -> A,T -> C,371,MFS transporter CDS,,GTC -> GCC,443,SNP (transition),Substitution,WP_151141315.1,68.6%,0.0
C,5780266,5780266,1,1,,T -> C,372,aldehyde dehydrogenase family protein CDS,,CAT -> CAC,662,SNP (transition),None,WP_083349792.1,50.9%,0.0
CATA,1466503,1466506,3,2,GV -> GI,GGTG -> CATA,375,MFS transporter CDS,,"GGG,GTG -> GGC,ATA",440 -> 448,Substitution,Substitution,WP_151141315.1,65.8% -> 68.6%,6.2E-279
A,1396175,1396175,1,1,,G -> A,381,DUF6396 domain-containing protein CDS,,GAG -> GAA,742,SNP (transition),None,WP_151141269.1,49.3%,4.5E-162
G,1471702,1471702,1,1,,A -> G,381,alpha/beta hydrolase CDS,,ATT -> ATC,493,SNP (transition),None,WP_151141328.1,85.6%,0.0
A,7169901,7169901,1,1,,G -> A,381,DUF6396 domain-containing protein CDS,,GAG -> GAA,618,SNP (transition),None,WP_151143968.1,72.0%,0.0
A,5780277,5780277,1,1,F -> Y,T -> A,383,aldehyde dehydrogenase family protein CDS,,TTC -> TAC,632,SNP (transversion),Substitution,WP_083349792.1,50.2%,0.0
A,1396178,1396178,1,1,,C -> A,384,DUF6396 domain-containing protein CDS,,GGC -> GGA,712,SNP (transversion),None,WP_151141269.1,50.6%,5.4E-164
G,3397947,3397947,1,1,,A -> G,384,hypothetical protein CDS,,CTA -> CTG,382,SNP (transition),None,WP_318646620.1,58.1%,3.1E-139
A,7169904,7169904,1,1,,C -> A,384,DUF6396 domain-containing protein CDS,,GGC -> GGA,619,SNP (transversion),None,WP_151143968.1,71.6%,0.0
G,1396181,1396181,1,1,,A -> G,387,DUF6396 domain-containing protein CDS,,GTA -> GTG,698,SNP (transition),None,WP_151141269.1,49.6%,3.4E-154
G,7169907,7169907,1,1,,A -> G,387,DUF6396 domain-containing protein CDS,,GTA -> GTG,619,SNP (transition),None,WP_151143968.1,69.8%,0.0
T,1396184,1396184,1,1,,C -> T,390,DUF6396 domain-containing protein CDS,,GCC -> GCT,693,SNP (transition),None,WP_151141269.1,49.5%,9.9E-123
T,7169910,7169910,1,1,,C -> T,390,DUF6396 domain-containing protein CDS,,GCC -> GCT,609,SNP (transition),None,WP_151143968.1,68.8%,0.0
,1462627,1462627,1,1,,-A,393,enoyl-CoA hydratase/isomerase family protein CDS,,,421,Deletion,Frame Shift,WP_151141312.1,100.0%,4.0E-169
C,1473724,1473724,1,1,,T -> C,393,AraC family transcriptional regulator CDS,,GGT -> GGC,633,SNP (transition),None,WP_083348600.1,33.2%,1.9E-311
C,1472565,1472565,1,1,Y -> H,T -> C,394,XdhC family protein CDS,,TAC -> CAC,466,SNP (transition),Substitution,WP_151141331.1,51.7%,2.1E-19
G,3472607,3472607,1,1,K -> Q,T -> G,394,vgrG CDS,vgrG,AAG -> CAG,305,SNP (transversion),Substitution,WP_151142511.1,79.3%,0.0
T,1396190,1396190,1,1,,C -> T,396,DUF6396 domain-containing protein CDS,,GGC -> GGT,664,SNP (transition),None,WP_151141269.1,48.2%,3.2E-84
T,7169916,7169916,1,1,,C -> T,396,DUF6396 domain-containing protein CDS,,GGC -> GGT,583,SNP (transition),None,WP_151143968.1,67.4%,0.0
C,1466525,1466525,1,1,,T -> C,397,MFS transporter CDS,,TTG -> CTG,440,SNP (transition),None,WP_151141315.1,68.4%,5.3E-219
G,1472568,1472568,1,1,I -> V,A -> G,397,XdhC family protein CDS,,ATC -> GTC,466,SNP (transition),Substitution,WP_151141331.1,51.9%,9.0E-20
C,3472602,3472602,1,1,,T -> C,399,vgrG CDS,vgrG,TCA -> TCG,297,SNP (transition),None,WP_151142511.1,76.4%,0.0
CTA,1466528,1466530,2,2,V -> L,GTC -> CTA,400,MFS transporter CDS,,GTC -> CTA,444 -> 449,Substitution,Substitution,WP_151141315.1,67.3%,2.1E-214
A,1960586,1960586,1,1,L -> I,C -> A,400,AraC family transcriptional regulator CDS,,CTC -> ATC,829,SNP (transversion),Substitution,WP_083348735.1,39.8%,0.0
C,3472599,3472599,1,1,,T -> C,402,vgrG CDS,vgrG,GTA -> GTG,295,SNP (transition),None,WP_151142511.1,75.6%,0.0
T,1472574,1472574,1,1,,C -> T,403,XdhC family protein CDS,,CTG -> TTG,469,SNP (transition),None,WP_151141331.1,53.3%,2.4E-9
GCGC,1471671,1471674,3,2,TE -> AQ,CGGT -> GCGC,409,alpha/beta hydrolase CDS,,"ACC,GAG -> GCG,CAG",516 -> 521,Substitution,Substitution,WP_151141328.1,91.4% -> 93.0%,0.0
A,2456795,2456795,1,1,E -> K,G -> A,409,PQQ-dependent sugar dehydrogenase CDS,,GAA -> AAA,455,SNP (transition),Substitution,WP_151141996.1,100.0%,0.0
G,1466539,1466539,1,1,,C -> G,411,MFS transporter CDS,,GTC -> GTG,463,SNP (transversion),None,WP_151141315.1,64.6%,6.5E-178
T,1472582,1472582,1,1,,C -> T,411,XdhC family protein CDS,,AGC -> AGT,464,SNP (transition),None,WP_151141331.1,54.5%,2.0E-24
A,1518896,1518896,1,1,,G -> A,411,phnX CDS,phnX,GAG -> GAA,369,SNP (transition),None,WP_151141362.1,98.9%,0.0
C,1956229,1956229,1,1,,T -> C,411,enoyl-CoA hydratase/isomerase family protein CDS,,TAT -> TAC,445,SNP (transition),None,WP_151141764.1,50.1%,2.7E-101
,1462647,1462647,1,1,,(A)4 -> (A)3,413,enoyl-CoA hydratase/isomerase family protein CDS,,,427,Deletion (tandem repeat),Frame Shift,WP_151141312.1,100.0%,1.6E-171
C,1396208,1396208,1,1,,T -> C,414,DUF6396 domain-containing protein CDS,,ATT -> ATC,602,SNP (transition),None,WP_151141269.1,48.0%,9.9E-34
G,1460486,1460485,0,1,,(G)3 -> (G)4,414,(2Fe-2S)-binding protein CDS,,,464,Insertion (tandem repeat),Frame Shift,,99.8%,0.0
A,1518899,1518899,1,1,,G -> A,414,phnX CDS,phnX,AAG -> AAA,376,SNP (transition),None,WP_151141362.1,99.7%,0.0
C,7169934,7169934,1,1,,T -> C,414,DUF6396 domain-containing protein CDS,,ATT -> ATC,556,SNP (transition),None,WP_151143968.1,63.5%,5.8E-206
TCG,5780309,5780311,2,2,A -> S,GCT -> TCG,415,aldehyde dehydrogenase family protein CDS,,GCT -> TCG,609 -> 616,Substitution,Substitution,WP_083349792.1,48.5% -> 48.9%,0.0
CC,1396211,1396212,2,1,,TT -> CC,417,DUF6396 domain-containing protein CDS,,"TTT,TTG -> TTC,CTG",586 -> 594,Substitution,None,WP_151141269.1,46.2% -> 46.8%,1.1E-13
CC,7169937,7169938,2,1,,TT -> CC,417,DUF6396 domain-containing protein CDS,,"TTT,TTG -> TTC,CTG",549 -> 554,Substitution,None,WP_151143968.1,63.0% -> 63.2%,1.5E-201
A,1473749,1473749,1,1,L -> M,T -> A,418,AraC family transcriptional regulator CDS,,TTG -> ATG,604,SNP (transversion),Substitution,WP_083348600.1,30.6%,5.6E-267
G,3472581,3472581,1,1,,A -> G,420,vgrG CDS,vgrG,AGT -> AGC,274,SNP (transition),None,WP_151142511.1,67.9%,0.0
C,7165397,7165397,1,1,,T -> C,420,vgrG CDS,vgrG,AGT -> AGC,254,SNP (transition),None,WP_151143964.1,57.1%,9.1E-203
A,1473754,1473754,1,1,,G -> A,423,AraC family transcriptional regulator CDS,,GAG -> GAA,600,SNP (transition),None,WP_083348600.1,29.8%,2.6E-238
G,1518908,1518908,1,1,,A -> G,423,phnX CDS,phnX,GAA -> GAG,375,SNP (transition),None,WP_151141362.1,99.7%,0.0
G,1704483,1704483,1,1,,T -> G,423,gudD CDS,gudD,CTA -> CTC,444,SNP (transversion),None,WP_151141484.1,99.1%,0.0
G,1462658,1462657,0,1,,(G)2 -> (G)3,424,enoyl-CoA hydratase/isomerase family protein CDS,,,420,Insertion (tandem repeat),Frame Shift,WP_151141312.1,100.0%,0.0
A,1396220,1396220,1,1,,G -> A,426,DUF6396 domain-containing protein CDS,,CAG -> CAA,569,SNP (transition),None,WP_151141269.1,45.5%,3.1E-12
AA,5780320,5780321,2,1,ID -> IN,CG -> AA,426,aldehyde dehydrogenase family protein CDS,,"ATC,GAC -> ATA,AAC",626,Substitution,Substitution,WP_083349792.1,44.6% -> 44.9%,0.0
A,7169946,7169946,1,1,,G -> A,426,DUF6396 domain-containing protein CDS,,CAG -> CAA,545,SNP (transition),None,WP_151143968.1,59.6%,7.4E-148
,4073206,4073208,3,1,FW -> W,(TTC)4 -> (TTC)3,428,nuoM CDS,nuoM,"TTC,TGG -> TGG",328,Deletion (tandem repeat),Deletion,WP_020799548.1,100.0%,0.0
C,1518914,1518914,1,1,,G -> C,429,phnX CDS,phnX,GCG -> GCC,385,SNP (transversion),None,WP_151141362.1,100.0%,0.0
AACAT,5780325,5780329,4,2,GN -> EH,GCAAC -> AACAT,431,aldehyde dehydrogenase family protein CDS,,"GGC,AAC -> GAA,CAT",638 -> 645,Substitution,Substitution,WP_083349792.1,41.5% -> 42.1%,0.0
C,1518918,1518918,1,1,K -> Q,A -> C,433,phnX CDS,phnX,AAG -> CAG,388,SNP (transversion),Substitution,WP_151141362.1,99.7%,0.0
C,1466563,1466563,1,1,,T -> C,435,MFS transporter CDS,,GGT -> GGC,475,SNP (transition),None,WP_151141315.1,64.0%,2.6E-123
G,1471648,1471648,1,1,,A -> G,435,alpha/beta hydrolase CDS,,CAT -> CAC,502,SNP (transition),None,WP_151141328.1,99.0%,0.0
C,1960621,1960621,1,1,,T -> C,435,AraC family transcriptional regulator CDS,,TTT -> TTC,849,SNP (transition),None,WP_083348735.1,42.8%,0.0
G,3472566,3472566,1,1,,A -> G,435,vgrG CDS,vgrG,CGT -> CGC,276,SNP (transition),None,WP_151142511.1,59.8%,9.6E-252
C,7165412,7165412,1,1,,T -> C,435,vgrG CDS,vgrG,CGT -> CGC,275,SNP (transition),None,WP_151143964.1,64.7%,2.3E-316
C,1960624,1960624,1,1,,T -> C,438,AraC family transcriptional regulator CDS,,GAT -> GAC,843,SNP (transition),None,WP_083348735.1,42.7%,0.0
C,5780334,5780334,1,1,V -> A,T -> C,440,aldehyde dehydrogenase family protein CDS,,GTG -> GCG,655,SNP (transition),Substitution,WP_083349792.1,43.5%,0.0
G,1466569,1466569,1,1,,T -> G,441,MFS transporter CDS,,GTT -> GTG,490,SNP (transversion),None,WP_151141315.1,62.4%,7.5E-120
A,1471642,1471642,1,1,,G -> A,441,alpha/beta hydrolase CDS,,ACC -> ACT,518,SNP (transition),None,WP_151141328.1,99.2%,0.0
T,3398004,3398004,1,1,,G -> T,441,hypothetical protein CDS,,GCG -> GCT,389,SNP (transversion),None,WP_318646620.1,57.1%,2.6E-116
A,3472559,3472559,1,1,L -> F,G -> A,442,vgrG CDS,vgrG,CTC -> TTC,274,SNP (transition),Substitution,WP_151142511.1,55.8%,1.3E-196
T,7165419,7165419,1,1,L -> F,C -> T,442,vgrG CDS,vgrG,CTC -> TTC,289,SNP (transition),Substitution,WP_151143964.1,68.9%,0.0
G,1462678,1462677,0,1,,(G)3 -> (G)4,444,enoyl-CoA hydratase/isomerase family protein CDS,,,440,Insertion (tandem repeat),Frame Shift,WP_151141312.1,100.0%,0.0
C,1472615,1472615,1,1,,T -> C,444,XdhC family protein CDS,,CAT -> CAC,461,SNP (transition),None,WP_151141331.1,54.4%,3.9E-24
G,5780338,5780338,1,1,,C -> G,444,aldehyde dehydrogenase family protein CDS,,GCC -> GCG,665,SNP (transversion),None,WP_083349792.1,42.6%,0.0
G,1471636,1471636,1,1,,C -> G,447,alpha/beta hydrolase CDS,,GTG -> GTC,508,SNP (transversion),None,WP_151141328.1,98.8%,0.0
A,3472554,3472554,1,1,,T -> A,447,vgrG CDS,vgrG,CGA -> CGT,272,SNP (transversion),None,WP_151142511.1,54.8%,4.5E-175
T,7165424,7165424,1,1,,A -> T,447,vgrG CDS,vgrG,CGA -> CGT,291,SNP (transversion),None,WP_151143964.1,70.1%,0.0
A,1960636,1960636,1,1,,G -> A,450,AraC family transcriptional regulator CDS,,GAG -> GAA,886,SNP (transition),None,WP_083348735.1,44.0%,0.0
G,3398013,3398013,1,1,,A -> G,450,hypothetical protein CDS,,CCA -> CCG,397,SNP (transition),None,WP_318646620.1,57.2%,3.9E-119
TC,7169970,7169971,2,1,DS -> DP,CT -> TC,450,DUF6396 domain-containing protein CDS,,"GAC,TCG -> GAT,CCG",453 -> 458,Substitution,Substitution,WP_151143968.1,51.2% -> 52.2%,1.7E-87
T,1954711,1954711,1,1,,C -> T,451,AMP-binding protein CDS,,CTG -> TTG,463,SNP (transition),None,WP_151141762.1,38.4%,1.5E-190
T,5780345,5780345,1,1,I -> F,A -> T,451,aldehyde dehydrogenase family protein CDS,,ATC -> TTC,663,SNP (transversion),Substitution,WP_083349792.1,43.1%,0.0
A,1472624,1472624,1,1,,G -> A,453,XdhC family protein CDS,,GAG -> GAA,461,SNP (transition),None,WP_151141331.1,51.2%,2.5E-18
C,1704453,1704453,1,1,,T -> C,453,gudD CDS,gudD,AAA -> AAG,437,SNP (transition),None,WP_151141484.1,93.4%,0.0
A,1472630,1472630,1,1,,G -> A,459,XdhC family protein CDS,,GTG -> GTA,454,SNP (transition),None,WP_151141331.1,52.9%,6.6E-21
A,1704447,1704447,1,1,,G -> A,459,gudD CDS,gudD,CTC -> CTT,438,SNP (transition),None,WP_151141484.1,92.0%,0.0
A,1300013,1300013,1,1,,G -> A,468,IS4 family transposase CDS,,GCG -> GCA,323,SNP (transition),None,WP_151141195.1,58.2%,2.0E-11
C,1462702,1462702,1,1,,T -> C,468,enoyl-CoA hydratase/isomerase family protein CDS,,GAT -> GAC,445,SNP (transition),None,WP_151141312.1,80.2%,0.0
A,3873835,3873835,1,1,,G -> A,468,IS4 family transposase CDS,,GCG -> GCA,304,SNP (transition),None,WP_033042572.1,56.3%,9.2E-31
C,1462704,1462704,1,1,S -> T,G -> C,470,enoyl-CoA hydratase/isomerase family protein CDS,,AGC -> ACC,447,SNP (transversion),Substitution,WP_151141312.1,80.3%,0.0
T,6137582,6137582,1,1,,C -> T,471,ftsY CDS,ftsY,GCG -> GCA,387,SNP (transition),None,WP_151143678.1,25.1%,5.8E-247
C,7169991,7169991,1,1,,T -> C,471,DUF6396 domain-containing protein CDS,,TAT -> TAC,393,SNP (transition),None,WP_151143968.1,43.0%,2.4E-37
AC,7169993,7169994,2,1,F -> Y,TT -> AC,473,DUF6396 domain-containing protein CDS,,TTT -> TAC,385 -> 388,Substitution,Substitution,WP_151143968.1,41.0% -> 41.8%,3.4E-35
G,2585476,2585476,1,1,,T -> G,474,DUF2955 domain-containing protein CDS,,CCA -> CCC,429,SNP (transversion),None,WP_033042776.1,99.1%,0.0
C,3398037,3398037,1,1,,T -> C,474,hypothetical protein CDS,,GAT -> GAC,409,SNP (transition),None,WP_318646620.1,58.7%,2.2E-129
A,6137579,6137579,1,1,,T -> A,474,ftsY CDS,ftsY,CCA -> CCT,398,SNP (transversion),None,WP_151143678.1,27.6%,3.1E-274
A,3398039,3398039,1,1,T -> N,C -> A,476,hypothetical protein CDS,,ACC -> AAC,407,SNP (transversion),Substitution,WP_318646620.1,58.2%,3.4E-105
TG,6137576,6137577,2,1,E -> A,CT -> TG,476,ftsY CDS,ftsY,GAG -> GCA,405 -> 406,Substitution,Substitution,WP_151143678.1,28.4% -> 28.6%,1.2E-302
T,7169997,7169997,1,1,,C -> T,477,DUF6396 domain-containing protein CDS,,CGC -> CGT,363,SNP (transition),None,WP_151143968.1,38.6%,1.6E-25
C,7165457,7165457,1,1,E -> D,A -> C,480,vgrG CDS,vgrG,GAA -> GAC,321,SNP (transversion),Substitution,WP_151143964.1,81.0%,0.0
T,1472654,1472654,1,1,,C -> T,483,XdhC family protein CDS,,CGC -> CGT,448,SNP (transition),None,WP_151141331.1,58.9%,8.4E-52
T,7170003,7170003,1,1,,C -> T,483,DUF6396 domain-containing protein CDS,,GCC -> GCT,348,SNP (transition),None,WP_151143968.1,33.6%,2.8E-16
G,1960672,1960672,1,1,,A -> G,486,AraC family transcriptional regulator CDS,,TCA -> TCG,1014,SNP (transition),None,WP_083348735.1,46.2%,0.0
G,1704419,1704419,1,1,N -> H,T -> G,487,gudD CDS,gudD,AAT -> CAT,441,SNP (transversion),Substitution,WP_151141484.1,82.1%,0.0
G,3398050,3398050,1,1,Q -> E,C -> G,487,hypothetical protein CDS,,CAG -> GAG,414,SNP (transversion),Substitution,WP_318646620.1,60.1%,9.7E-138
T,2316236,2316236,1,1,C -> F,G -> T,488,uvrY CDS,uvrY,TGC -> TTC,314,SNP (transversion),Substitution,WP_008015884.1,37.9%,2.6E-304
C,1960675,1960675,1,1,,A -> C,489,AraC family transcriptional regulator CDS,,CTA -> CTC,1025,SNP (transversion),None,WP_083348735.1,47.1%,0.0
CAC,7170010,7170012,2,2,N -> H,AAT -> CAC,490,DUF6396 domain-containing protein CDS,,AAT -> CAC,324 -> 332,Substitution,Substitution,WP_151143968.1,28.1% -> 28.6%,1.8E-8
G,3398054,3398054,1,1,N -> S,A -> G,491,hypothetical protein CDS,,AAC -> AGC,424,SNP (transition),Substitution,WP_318646620.1,60.8%,1.3E-168
C,1466621,1466621,1,1,,T -> C,493,MFS transporter CDS,,TTG -> CTG,527,SNP (transition),None,WP_151141315.1,57.3%,2.5E-55
G,1418931,1418931,1,1,,A -> G,495,hutU CDS,hutU,GAT -> GAC,438,SNP (transition),None,WP_151141280.1,62.6%,0.0
CT,1462729,1462730,2,1,,GC -> CT,495,enoyl-CoA hydratase/isomerase family protein CDS,,"GCG,CTG -> GCC,TTG",435 -> 438,Substitution,None,WP_151141312.1,83.3% -> 83.9%,0.0
A,1472666,1472666,1,1,,C -> A,495,XdhC family protein CDS,,GGC -> GGA,435,SNP (transversion),None,WP_151141331.1,58.9%,3.9E-50
G,3398058,3398058,1,1,,A -> G,495,hypothetical protein CDS,,CAA -> CAG,422,SNP (transition),None,WP_318646620.1,60.2%,2.4E-164
C,3472506,3472506,1,1,,T -> C,495,vgrG CDS,vgrG,GAA -> GAG,235,SNP (transition),None,WP_151142511.1,34.9%,1.1E-76
G,7165472,7165472,1,1,,A -> G,495,vgrG CDS,vgrG,GAA -> GAG,333,SNP (transition),None,WP_151143964.1,85.3%,0.0
C,7170015,7170015,1,1,,G -> C,495,DUF6396 domain-containing protein CDS,,GGG -> GGC,319,SNP (transversion),None,WP_151143968.1,27.0%,3.1E-7
G,1704408,1704408,1,1,,A -> G,498,gudD CDS,gudD,GAT -> GAC,446,SNP (transition),None,WP_151141484.1,80.7%,0.0
G,480678,480678,1,1,,A -> G,501,gamma-aminobutyraldehyde dehydrogenase CDS,,AAT -> AAC,455,SNP (transition),None,WP_151140588.1,56.3%,4.5E-65
C,1472672,1472672,1,1,,G -> C,501,XdhC family protein CDS,,GCG -> GCC,431,SNP (transversion),None,WP_151141331.1,59.4%,3.5E-51
G,3472500,3472500,1,1,,C -> G,501,vgrG CDS,vgrG,GTG -> GTC,234,SNP (transversion),None,WP_151142511.1,32.1%,2.5E-74
C,7165478,7165478,1,1,,G -> C,501,vgrG CDS,vgrG,GTG -> GTC,332,SNP (transversion),None,WP_151143964.1,86.7%,0.0
A,1418922,1418922,1,1,,G -> A,504,hutU CDS,hutU,GGC -> GGT,423,SNP (transition),None,WP_151141280.1,62.9%,3.9E-282
A,1704402,1704402,1,1,,G -> A,504,gudD CDS,gudD,GCC -> GCT,435,SNP (transition),None,WP_151141484.1,80.0%,0.0
T,3398069,3398069,1,1,A -> V,C -> T,506,hypothetical protein CDS,,GCC -> GTC,435,SNP (transition),Substitution,WP_318646620.1,60.0%,2.6E-168
G,1462741,1462741,1,1,,A -> G,507,enoyl-CoA hydratase/isomerase family protein CDS,,GAA -> GAG,420,SNP (transition),None,WP_151141312.1,87.6%,0.0
A,1472678,1472678,1,1,,C -> A,507,XdhC family protein CDS,,CGC -> CGA,439,SNP (transversion),None,WP_151141331.1,60.4%,7.3E-55
C,1518993,1518993,1,1,,T -> C,508,phnX CDS,phnX,TTG -> CTG,460,SNP (transition),None,WP_151141362.1,98.0%,0.0
A,1704396,1704396,1,1,,G -> A,510,gudD CDS,gudD,CGC -> CGT,438,SNP (transition),None,WP_151141484.1,78.3%,0.0
T,1462747,1462747,1,1,,G -> T,513,enoyl-CoA hydratase/isomerase family protein CDS,,CGG -> CGT,420,SNP (transversion),None,WP_151141312.1,89.0%,0.0
G,3398076,3398076,1,1,,C -> G,513,hypothetical protein CDS,,CGC -> CGG,441,SNP (transversion),None,WP_318646620.1,61.5%,1.2E-178
T,7165490,7165490,1,1,,C -> T,513,vgrG CDS,vgrG,GGC -> GGT,340,SNP (transition),None,WP_151143964.1,88.2%,0.0
T,1466644,1466644,1,1,,C -> T,516,MFS transporter CDS,,GGC -> GGT,561,SNP (transition),None,WP_151141315.1,56.0%,2.3E-54
C,1704389,1704389,1,1,S -> A,A -> C,517,gudD CDS,gudD,TCC -> GCC,445,SNP (transversion),Substitution,WP_151141484.1,76.2%,0.0
GGTG,6137532,6137535,4,1,VI -> AP,ATAA -> GGTG,518,ftsY CDS,ftsY,"GTT,ATT -> GCA,CCT",413 -> 417,Substitution,Substitution,WP_151143678.1,30.0% -> 31.5%,7.7E-316
G,1418907,1418907,1,1,,A -> G,519,hutU CDS,hutU,ACT -> ACC,410,SNP (transition),None,WP_151141280.1,58.8%,1.6E-198
G,1418904,1418904,1,1,,T -> G,522,hutU CDS,hutU,GCA -> GCC,406,SNP (transversion),None,WP_151141280.1,57.1%,3.5E-187
G,859000,859000,1,1,,T -> G,525,vgrG CDS,vgrG,CTT -> CTG,441,SNP (transversion),None,WP_151140887.1,98.4%,0.0
G,1418901,1418901,1,1,,A -> G,525,hutU CDS,hutU,GGT -> GGC,411,SNP (transition),None,WP_151141280.1,55.2%,1.4E-178
T,6137528,6137528,1,1,,A -> T,525,ftsY CDS,ftsY,GCT -> GCA,424,SNP (transversion),None,WP_151143678.1,27.4%,6.7E-277
G,1418898,1418898,1,1,,C -> G,528,hutU CDS,hutU,CTG -> CTC,408,SNP (transversion),None,WP_151141280.1,55.1%,1.8E-198
G,1472699,1472699,1,1,,T -> G,528,XdhC family protein CDS,,TCT -> TCG,452,SNP (transversion),None,WP_151141331.1,63.9%,1.4E-67
T,1519013,1519013,1,1,,G -> T,528,phnX CDS,phnX,CTG -> CTT,458,SNP (transversion),None,WP_151141362.1,99.3%,0.0
TGTGCCTGTGCC,5997806,5997805,0,1, -> GTGT,(CCTGTG)5 -> (CCTGTG)7,532,DUF2780 domain-containing protein CDS,," -> GGC,ACA,GGC,ACA",470 -> 479,Insertion (tandem repeat),Insertion,WP_151143597.1,97.5% -> 97.9%,0.0
G,1472708,1472708,1,1,,T -> G,537,XdhC family protein CDS,,GCT -> GCG,426,SNP (transversion),None,WP_151141331.1,68.1%,2.5E-102
,1462773,1462773,1,1,,-A,539,enoyl-CoA hydratase/isomerase family protein CDS,,,399,Deletion,Frame Shift,WP_151141312.1,100.0%,0.0
G,3398102,3398102,1,1,H -> R,A -> G,539,hypothetical protein CDS,,CAC -> CGC,440,SNP (transition),Substitution,WP_318646620.1,57.5%,7.7E-157
G,1704366,1704366,1,1,L -> F,C -> G,540,gudD CDS,gudD,TTG -> TTC,419,SNP (transversion),Substitution,WP_151141484.1,70.6%,1.3E-250
G,7165517,7165517,1,1,,C -> G,540,vgrG CDS,vgrG,CGC -> CGG,372,SNP (transversion),None,WP_151143964.1,95.7%,0.0
A,1462778,1462778,1,1,E -> K,G -> A,544,enoyl-CoA hydratase/isomerase family protein CDS,,GAA -> AAA,389,SNP (transition),Substitution,WP_151141312.1,98.5%,0.0
AAT,1704360,1704362,2,2,V -> I,TAC -> AAT,544,gudD CDS,gudD,GTA -> ATT,416 -> 417,Substitution,Substitution,WP_151141484.1,70.0% -> 70.2%,3.5E-217
T,3398108,3398108,1,1,P -> L,C -> T,545,hypothetical protein CDS,,CCC -> CTC,429,SNP (transition),Substitution,WP_318646620.1,57.3%,3.7E-152
C,1418877,1418877,1,1,,T -> C,549,hutU CDS,hutU,CAA -> CAG,402,SNP (transition),None,WP_151141280.1,52.7%,4.0E-141
C,1519034,1519034,1,1,,T -> C,549,phnX CDS,phnX,GCT -> GCC,462,SNP (transition),None,WP_151141362.1,99.4%,0.0
A,1704357,1704357,1,1,,G -> A,549,gudD CDS,gudD,CGC -> CGT,417,SNP (transition),None,WP_151141484.1,69.5%,2.5E-214
AGC,1957358,1957360,3,1,SF -> SA,GTT -> AGC,552,MFS transporter CDS,,"TCG,TTC -> TCA,GCC",519 -> 523,Substitution,Substitution,WP_151141766.1,55.8% -> 56.3%,3.5E-51
T,1704348,1704348,1,1,,C -> T,558,gudD CDS,gudD,AAG -> AAA,417,SNP (transition),None,WP_151141484.1,69.1%,1.7E-211
G,1418865,1418865,1,1,,T -> G,561,hutU CDS,hutU,GCA -> GCC,387,SNP (transversion),None,WP_151141280.1,49.6%,1.6E-121
T,1957367,1957367,1,1,,C -> T,561,MFS transporter CDS,,TAC -> TAT,515,SNP (transition),None,WP_151141766.1,56.1%,1.7E-50
G,1957369,1957369,1,1,L -> R,T -> G,563,MFS transporter CDS,,CTG -> CGG,509,SNP (transversion),Substitution,WP_151141766.1,56.4%,1.0E-50
C,1519049,1519049,1,1,,T -> C,564,phnX CDS,phnX,GAT -> GAC,451,SNP (transition),None,WP_151141362.1,100.0%,0.0
G,1418856,1418856,1,1,,A -> G,570,hutU CDS,hutU,GCT -> GCC,371,SNP (transition),None,WP_151141280.1,49.9%,1.2E-117
A,480606,480606,1,1,,G -> A,573,gamma-aminobutyraldehyde dehydrogenase CDS,,ATC -> ATT,442,SNP (transition),None,WP_151140588.1,55.7%,1.8E-25
CAG,1957380,1957382,2,2,E -> Q,GAA -> CAG,574,MFS transporter CDS,,GAA -> CAG,501 -> 503,Substitution,Substitution,WP_151141766.1,57.7%,5.9E-54
A,3398137,3398137,1,1,A -> T,G -> A,574,hypothetical protein CDS,,GCT -> ACT,435,SNP (transition),Substitution,WP_318646620.1,62.3%,6.6E-233
G,1704330,1704330,1,1,,T -> G,576,gudD CDS,gudD,GCA -> GCC,411,SNP (transversion),None,WP_151141484.1,66.9%,5.4E-170
G,1704327,1704327,1,1,,T -> G,579,gudD CDS,gudD,GTA -> GTC,406,SNP (transversion),None,WP_151141484.1,66.7%,4.0E-167
C,1957385,1957385,1,1,,T -> C,579,MFS transporter CDS,,ATT -> ATC,500,SNP (transition),None,WP_151141766.1,58.0%,1.0E-54
T,6789682,6789682,1,1,,A -> T,579,hutU CDS,hutU,GCA -> GCT,596,SNP (transversion),None,WP_083350018.1,25.8%,9.1E-286
A,3398143,3398143,1,1,L -> M,C -> A,580,hypothetical protein CDS,,CTG -> ATG,434,SNP (transversion),Substitution,WP_318646620.1,61.3%,7.2E-226
T,1957388,1957388,1,1,,C -> T,582,MFS transporter CDS,,TTC -> TTT,495,SNP (transition),None,WP_151141766.1,58.0%,4.1E-54
T,1462817,1462817,1,1,R -> C,C -> T,583,enoyl-CoA hydratase/isomerase family protein CDS,,CGT -> TGT,382,SNP (transition),Substitution,WP_151141312.1,97.9%,0.0
T,1519076,1519076,1,1,,C -> T,591,phnX CDS,phnX,GGC -> GGT,447,SNP (transition),None,WP_151141362.1,99.3%,0.0
T,1704315,1704315,1,1,,A -> T,591,gudD CDS,gudD,GCT -> GCA,423,SNP (transversion),None,WP_151141484.1,66.9%,7.3E-175
C,1519079,1519079,1,1,,A -> C,594,phnX CDS,phnX,CGA -> CGC,447,SNP (transversion),None,WP_151141362.1,99.8%,0.0
G,1960780,1960780,1,1,,A -> G,594,AraC family transcriptional regulator CDS,,GCA -> GCG,1009,SNP (transition),None,WP_083348735.1,46.9%,0.0
T,1704309,1704309,1,1,,G -> T,597,gudD CDS,gudD,GCC -> GCA,422,SNP (transversion),None,WP_151141484.1,66.4%,1.6E-171
G,3398162,3398162,1,1,Q -> R,A -> G,599,hypothetical protein CDS,,CAG -> CGG,461,SNP (transition),Substitution,WP_318646620.1,64.0%,3.2E-287
G,480579,480579,1,1,,C -> G,600,gamma-aminobutyraldehyde dehydrogenase CDS,,GTG -> GTC,447,SNP (transversion),None,WP_151140588.1,55.3%,5.6E-25
C,1418826,1418826,1,1,,T -> C,600,hutU CDS,hutU,CAA -> CAG,296,SNP (transition),None,WP_151141280.1,38.9%,4.1E-49
C,1704306,1704306,1,1,,T -> C,600,gudD CDS,gudD,GCA -> GCG,421,SNP (transition),None,WP_151141484.1,66.0%,1.8E-143
T,1960786,1960786,1,1,,G -> T,600,AraC family transcriptional regulator CDS,,GCG -> GCT,992,SNP (transversion),None,WP_083348735.1,47.0%,0.0
GC,1704303,1704304,2,1,K -> S,CT -> GC,602,gudD CDS,gudD,AAG -> AGC,424,Substitution,Substitution,WP_151141484.1,65.1%,5.1E-140
ACGGCTT,1418817,1418823,6,2,QVS -> QSR,GCTCACC -> ACGGCTT,603,hutU CDS,hutU,"CAG,GTG,AGC -> CAA,AGC,CGT",284 -> 297,Substitution,Substitution,WP_151141280.1,33.1% -> 34.8%,2.6E-26
A,1519088,1519088,1,1,,C -> A,603,phnX CDS,phnX,GGC -> GGA,442,SNP (transversion),None,WP_151141362.1,98.9%,0.0
T,1704300,1704300,1,1,,G -> T,606,gudD CDS,gudD,GCC -> GCA,422,SNP (transversion),None,WP_151141484.1,65.2%,1.1E-139
AAG,6789709,6789711,3,1,QV -> QS,GGT -> AAG,606,hutU CDS,hutU,"CAG,GTC -> CAA,AGC",681 -> 688,Substitution,Substitution,WP_083350018.1,34.5% -> 35.9%,0.0
C,5780501,5780501,1,1,,T -> C,607,aldehyde dehydrogenase family protein CDS,,TTG -> CTG,671,SNP (transition),None,WP_083349792.1,44.6%,0.0
C,3472392,3472392,1,1,,T -> C,609,vgrG CDS,vgrG,GAA -> GAG,184,SNP (transition),None,WP_151142511.1,74.5%,0.0
CGT,6789713,6789715,2,2,S -> R,AGC -> CGT,610,hutU CDS,hutU,AGC -> CGT,688 -> 695,Substitution,Substitution,WP_083350018.1,36.0% -> 36.5%,0.0
A,1704294,1704294,1,1,,G -> A,612,gudD CDS,gudD,TAC -> TAT,428,SNP (transition),None,WP_151141484.1,65.2%,2.6E-116
G,1960798,1960798,1,1,,C -> G,612,AraC family transcriptional regulator CDS,,TCC -> TCG,970,SNP (transversion),None,WP_083348735.1,48.4%,0.0
G,1418811,1418811,1,1,,A -> G,615,hutU CDS,hutU,GAT -> GAC,280,SNP (transition),None,WP_151141280.1,30.0%,1.4E-20
G,1957423,1957423,1,1,F -> C,T -> G,617,MFS transporter CDS,,TTC -> TGC,485,SNP (transversion),Substitution,WP_151141766.1,56.9%,6.6E-50
G,3472383,3472383,1,1,,A -> G,618,vgrG CDS,vgrG,GAT -> GAC,173,SNP (transition),None,WP_151142511.1,71.1%,0.0
C,6789721,6789721,1,1,,T -> C,618,hutU CDS,hutU,GAT -> GAC,722,SNP (transition),None,WP_083350018.1,39.1%,0.0
G,480558,480558,1,1,,A -> G,621,gamma-aminobutyraldehyde dehydrogenase CDS,,GTT -> GTC,461,SNP (transition),None,WP_151140588.1,56.4%,5.1E-28
C,3472380,3472380,1,1,,A -> C,621,vgrG CDS,vgrG,GGT -> GGG,173,SNP (transversion),None,WP_151142511.1,68.8%,2.7E-312
C,6789724,6789724,1,1,,T -> C,621,hutU CDS,hutU,TTT -> TTC,728,SNP (transition),None,WP_083350018.1,40.2%,0.0
A,1704282,1704282,1,1,,G -> A,624,gudD CDS,gudD,GAC -> GAT,421,SNP (transition),None,WP_151141484.1,67.2%,3.5E-149
T,4814636,4814636,1,1,M -> I,G -> T,624,caspase family protein CDS,,ATG -> ATT,1061,SNP (transversion),Substitution,WP_151143071.1,100.0%,0.0
T,6789727,6789727,1,1,,C -> T,624,hutU CDS,hutU,CGC -> CGT,737,SNP (transition),None,WP_083350018.1,39.6%,0.0
GG,1418799,1418800,2,1,K -> T,TT -> GG,626,hutU CDS,hutU,AAA -> ACC,268,Substitution,Substitution,WP_151141280.1,25.0%,4.3E-9
G,5780521,5780521,1,1,,A -> G,627,aldehyde dehydrogenase family protein CDS,,CCA -> CCG,683,SNP (transition),None,WP_083349792.1,45.7%,0.0
CC,6789732,6789733,2,1,K -> T,AA -> CC,629,hutU CDS,hutU,AAA -> ACC,752 -> 757,Substitution,Substitution,WP_083350018.1,39.8% -> 40.0%,0.0
C,1957439,1957439,1,1,,G -> C,633,MFS transporter CDS,,GGG -> GGC,468,SNP (transversion),None,WP_151141766.1,56.8%,5.0E-48
T,5780527,5780527,1,1,,C -> T,633,aldehyde dehydrogenase family protein CDS,,GGC -> GGT,679,SNP (transition),None,WP_083349792.1,45.2%,0.0
C,1459901,1459900,0,1,,+C,635,FAD binding domain-containing protein CDS,,,489,Insertion,Frame Shift,,98.4%,0.0
T,3398199,3398199,1,1,,C -> T,636,hypothetical protein CDS,,GCC -> GCT,477,SNP (transition),None,WP_318646620.1,70.4%,0.0
G,1960824,1960824,1,1,K -> R,A -> G,638,AraC family transcriptional regulator CDS,,AAG -> AGG,954,SNP (transition),Substitution,WP_083348735.1,48.0%,0.0
C,1950592,1950592,1,1,,T -> C,639,molybdopterin cofactor-binding domain-containingprotein CDS,,ACT -> ACC,557,SNP (transition),None,WP_151141759.1,79.2%,0.0
T,6789742,6789742,1,1,,C -> T,639,hutU CDS,hutU,TAC -> TAT,781,SNP (transition),None,WP_083350018.1,43.8%,0.0
A,1704264,1704264,1,1,,G -> A,642,gudD CDS,gudD,GGC -> GGT,421,SNP (transition),None,WP_151141484.1,68.2%,7.9E-154
T,1950598,1950598,1,1,,C -> T,645,molybdopterin cofactor-binding domain-containingprotein CDS,,ATC -> ATT,555,SNP (transition),None,WP_151141759.1,76.0%,0.0
A,1704260,1704260,1,1,,G -> A,646,gudD CDS,gudD,CTG -> TTG,432,SNP (transition),None,WP_151141484.1,69.2%,4.0E-163
T,3472353,3472353,1,1,,C -> T,648,vgrG CDS,vgrG,GAG -> GAA,162,SNP (transition),None,WP_151142511.1,59.3%,1.9E-194
T,1704257,1704257,1,1,R -> S,G -> T,649,gudD CDS,gudD,CGC -> AGC,434,SNP (transversion),Substitution,WP_151141484.1,69.4%,1.1E-136
T,1957460,1957460,1,1,,G -> T,654,MFS transporter CDS,,GGG -> GGT,450,SNP (transversion),None,WP_151141766.1,54.7%,5.2E-24
CG,3472345,3472346,2,1,Y -> R,TA -> CG,655,vgrG CDS,vgrG,TAC -> CGC,167 -> 169,Substitution,Substitution,WP_151142511.1,53.8% -> 54.5%,1.9E-181
G,6213216,6213216,1,1,,C -> G,657,glutamine synthetase family protein CDS,,GTC -> GTG,538,SNP (transversion),None,WP_151143704.1,98.0%,0.0
A,3472342,3472342,1,1,Y -> F,T -> A,659,vgrG CDS,vgrG,TAC -> TTC,169,SNP (transversion),Substitution,WP_151142511.1,56.2%,2.7E-170
GAA,3398224,3398226,2,2,K -> E,AAG -> GAA,661,hypothetical protein CDS,,AAG -> GAA,454 -> 456,Substitution,Substitution,WP_318646620.1,70.4% -> 70.7%,0.0
G,3472340,3472340,1,1,S -> P,A -> G,661,vgrG CDS,vgrG,TCG -> CCG,171,SNP (transition),Substitution,WP_151142511.1,55.0%,6.2E-186
AG,3398231,3398232,2,1,T -> K,CC -> AG,668,hypothetical protein CDS,,ACC -> AAG,451,Substitution,Substitution,WP_318646620.1,75.6% -> 76.1%,0.0
T,1957475,1957475,1,1,,C -> T,669,MFS transporter CDS,,CGC -> CGT,444,SNP (transition),None,WP_151141766.1,52.5%,7.9E-20
C,1959695,1959695,1,1,,G -> C,669,XdhC family protein CDS,,GCG -> GCC,543,SNP (transversion),None,WP_151141331.1,99.3%,0.0
G,3472332,3472332,1,1,,C -> G,669,vgrG CDS,vgrG,GCG -> GCC,185,SNP (transversion),None,WP_151142511.1,51.9%,9.1E-158
C,1704234,1704234,1,1,,T -> C,672,gudD CDS,gudD,GCA -> GCG,456,SNP (transition),None,WP_151141484.1,66.4%,1.3E-129
A,1950625,1950625,1,1,,C -> A,672,molybdopterin cofactor-binding domain-containingprotein CDS,,GGC -> GGA,533,SNP (transversion),None,WP_151141759.1,71.1%,0.0
C,1957478,1957478,1,1,,T -> C,672,MFS transporter CDS,,TAT -> TAC,442,SNP (transition),None,WP_151141766.1,51.4%,3.3E-32
A,3398235,3398235,1,1,,C -> A,672,hypothetical protein CDS,,GCC -> GCA,451,SNP (transversion),None,WP_318646620.1,77.6%,0.0
A,3662335,3662335,1,1,,G -> A,672,vgrG CDS,vgrG,GGC -> GGT,304,SNP (transition),None,WP_151142574.1,93.4%,7.5E-283
,3472324,3472326,3,1,LS -> L,(GCT)3 -> (GCT)2,675,vgrG CDS,vgrG,"CTC,AGC -> CTC",184 -> 188,Deletion (tandem repeat),Deletion,WP_151142511.1,42.0% -> 42.9%,2.5E-30
G,1704228,1704228,1,1,,T -> G,678,gudD CDS,gudD,ACA -> ACC,465,SNP (transversion),None,WP_151141484.1,67.5%,2.7E-137
C,5780572,5780572,1,1,,G -> C,678,aldehyde dehydrogenase family protein CDS,,GCG -> GCC,704,SNP (transversion),None,WP_083349792.1,46.0%,0.0
C,6213237,6213237,1,1,,T -> C,678,glutamine synthetase family protein CDS,,GAT -> GAC,569,SNP (transition),None,WP_151143704.1,98.9%,0.0
G,6213240,6213240,1,1,,T -> G,681,glutamine synthetase family protein CDS,,CCT -> CCG,572,SNP (transversion),None,WP_151143704.1,99.0%,0.0
C,6213243,6213243,1,1,,A -> C,684,glutamine synthetase family protein CDS,,ATA -> ATC,574,SNP (transversion),None,WP_151143704.1,99.5%,0.0
A,1704219,1704219,1,1,,G -> A,687,gudD CDS,gudD,GCC -> GCT,463,SNP (transition),None,WP_151141484.1,67.0%,5.7E-134
C,6213249,6213249,1,1,,T -> C,690,glutamine synthetase family protein CDS,,GCT -> GCC,578,SNP (transition),None,WP_151143704.1,99.3%,0.0
G,1456985,1456984,0,1,,+G,692,molybdopterin cofactor-binding domain-containingprotein CDS,,,553,Insertion,Frame Shift,,99.8%,0.0
T,3398257,3398257,1,1,L -> F,C -> T,694,hypothetical protein CDS,,CTT -> TTT,444,SNP (transition),Substitution,WP_318646620.1,85.1%,0.0
G,3472307,3472307,1,1,G -> R,C -> G,694,vgrG CDS,vgrG,GGC -> CGC,217,SNP (transversion),Substitution,WP_151142511.1,50.7%,1.3E-124
C,6213255,6213255,1,1,,T -> C,696,glutamine synthetase family protein CDS,,GAT -> GAC,599,SNP (transition),None,WP_151143704.1,99.2%,0.0
G,1704204,1704204,1,1,E -> D,T -> G,702,gudD CDS,gudD,GAA -> GAC,461,SNP (transversion),Substitution,WP_151141484.1,67.0%,9.5E-134
A,6213261,6213261,1,1,,G -> A,702,glutamine synthetase family protein CDS,,GCG -> GCA,637,SNP (transition),None,WP_151143704.1,96.1%,0.0
T,3472297,3472297,1,1,G -> D,C -> T,704,vgrG CDS,vgrG,GGC -> GAC,220,SNP (transition),Substitution,WP_151142511.1,51.4%,7.8E-129
C,1704198,1704198,1,1,,T -> C,708,gudD CDS,gudD,CGA -> CGG,466,SNP (transition),None,WP_151141484.1,65.7%,1.1E-128
T,1959734,1959734,1,1,,C -> T,708,XdhC family protein CDS,,ACC -> ACT,543,SNP (transition),None,WP_151141331.1,99.1%,0.0
C,1457003,1457002,0,1,,+C,710,molybdopterin cofactor-binding domain-containingprotein CDS,,,569,Insertion,Frame Shift,,99.8%,0.0
C,1474045,1474045,1,1,,T -> C,714,AraC family transcriptional regulator CDS,,CGT -> CGC,510,SNP (transition),None,WP_083348600.1,25.7%,5.0E-256
C,1960900,1960900,1,1,,T -> C,714,AraC family transcriptional regulator CDS,,CGT -> CGC,942,SNP (transition),None,WP_083348735.1,44.4%,0.0
C,1950670,1950670,1,1,,T -> C,717,molybdopterin cofactor-binding domain-containingprotein CDS,,CCT -> CCC,535,SNP (transition),None,WP_151141759.1,68.8%,1.1E-268
A,1957523,1957523,1,1,,G -> A,717,MFS transporter CDS,,AAG -> AAA,465,SNP (transition),None,WP_151141766.1,55.7%,1.2E-44
A,3472284,3472284,1,1,,G -> A,717,vgrG CDS,vgrG,CAC -> CAT,221,SNP (transition),None,WP_151142511.1,55.7%,3.7E-158
C,6213276,6213276,1,1,,T -> C,717,glutamine synthetase family protein CDS,,CGT -> CGC,650,SNP (transition),None,WP_151143704.1,99.2%,0.0
ATC,6213280,6213282,2,2,V -> I,GTG -> ATC,721,glutamine synthetase family protein CDS,,GTG -> ATC,651 -> 658,Substitution,Substitution,WP_151143704.1,97.1% -> 97.6%,0.0
G,1474057,1474057,1,1,,A -> G,726,AraC family transcriptional regulator CDS,,GGA -> GGG,531,SNP (transition),None,WP_083348600.1,32.0%,0.0
T,1957532,1957532,1,1,,G -> T,726,MFS transporter CDS,,GGG -> GGT,481,SNP (transversion),None,WP_151141766.1,55.7%,3.7E-46
G,1960912,1960912,1,1,,A -> G,726,AraC family transcriptional regulator CDS,,GGA -> GGG,911,SNP (transition),None,WP_083348735.1,42.0%,0.0
C,3472275,3472275,1,1,,T -> C,726,vgrG CDS,vgrG,GTA -> GTG,215,SNP (transition),None,WP_151142511.1,57.7%,1.8E-174
G,6213285,6213285,1,1,,A -> G,726,glutamine synthetase family protein CDS,,AAA -> AAG,635,SNP (transition),None,WP_151143704.1,97.5%,0.0
G,1474060,1474060,1,1,,A -> G,729,AraC family transcriptional regulator CDS,,ACA -> ACG,536,SNP (transition),None,WP_083348600.1,33.6%,0.0
A,1704177,1704177,1,1,,G -> A,729,gudD CDS,gudD,GGC -> GGT,485,SNP (transition),None,WP_151141484.1,64.3%,1.9E-127
C,1957537,1957537,1,1,E -> A,A -> C,731,MFS transporter CDS,,GAG -> GCG,482,SNP (transversion),Substitution,WP_151141766.1,56.2%,1.1E-47
T,1704174,1704174,1,1,,G -> T,732,gudD CDS,gudD,GCC -> GCA,482,SNP (transversion),None,WP_151141484.1,63.7%,1.1E-123
G,3472265,3472265,1,1,N -> H,T -> G,736,vgrG CDS,vgrG,AAC -> CAC,222,SNP (transversion),Substitution,WP_151142511.1,59.0%,3.8E-212
G,1948328,1948328,1,1,,A -> G,738,site-specific integrase CDS,,ACT -> ACC,630,SNP (transition),None,WP_151141757.1,99.5%,0.0
A,1704165,1704165,1,1,,G -> A,741,gudD CDS,gudD,CTC -> CTT,464,SNP (transition),None,WP_151141484.1,63.4%,1.2E-117
T,1704162,1704162,1,1,,C -> T,744,gudD CDS,gudD,AAG -> AAA,468,SNP (transition),None,WP_151141484.1,63.5%,4.4E-119
T,6213303,6213303,1,1,,C -> T,744,glutamine synthetase family protein CDS,,CAC -> CAT,634,SNP (transition),None,WP_151143704.1,95.0%,0.0
GT,1094621,1094622,2,1,H -> V,CA -> GT,745,DUF808 domain-containing protein CDS,,CAC -> GTC,240 -> 244,Substitution,Substitution,WP_151141000.1,25.4% -> 25.8%,2.0E-159
C,3472256,3472256,1,1,I -> V,T -> C,745,vgrG CDS,vgrG,ATC -> GTC,223,SNP (transition),Substitution,WP_151142511.1,61.0%,1.2E-236
A,6213306,6213306,1,1,,G -> A,747,glutamine synthetase family protein CDS,,GAG -> GAA,626,SNP (transition),None,WP_151143704.1,94.9%,0.0
CG,1094625,1094626,2,1,G -> A,GT -> CG,749,DUF808 domain-containing protein CDS,,GGT -> GCG,247 -> 268,Substitution,Substitution,WP_151141000.1,30.8% -> 36.9%,1.3E-186
A,1957556,1957556,1,1,,G -> A,750,MFS transporter CDS,,CCG -> CCA,467,SNP (transition),None,WP_151141766.1,56.3%,1.7E-46
G,1457044,1457043,0,1,,+G,751,molybdopterin cofactor-binding domain-containingprotein CDS,,,564,Insertion,Frame Shift,,100.0%,0.0
C,3472250,3472250,1,1,T -> A,T -> C,751,vgrG CDS,vgrG,ACC -> GCC,222,SNP (transition),Substitution,WP_151142511.1,62.2%,1.3E-255
GGG,1094628,1094630,3,1,VP -> GA,TTC -> GGG,752,DUF808 domain-containing protein CDS,,"GTT,CCG -> GGG,GCG",265 -> 267,Substitution,Substitution,WP_151141000.1,39.3% -> 40.0%,1.4E-295
C,6789856,6789856,1,1,,G -> C,753,hutU CDS,hutU,CCG -> CCC,921,SNP (transversion),None,WP_083350018.1,48.9%,0.0
G,2441719,2441719,1,1,K -> N,T -> G,756,heme utilization protein CDS,,AAA -> AAC,497,SNP (transversion),Substitution,WP_151141988.1,26.6%,0.0
A,3472245,3472245,1,1,,G -> A,756,vgrG CDS,vgrG,TAC -> TAT,228,SNP (transition),None,WP_151142511.1,64.9%,2.2E-278
C,2441717,2441717,1,1,N -> S,T -> C,758,heme utilization protein CDS,,AAC -> AGC,494,SNP (transition),Substitution,WP_151141988.1,27.9%,0.0
C,6213318,6213318,1,1,,G -> C,759,glutamine synthetase family protein CDS,,ACG -> ACC,609,SNP (transversion),None,WP_151143704.1,94.6%,0.0
GCT,2441713,2441715,3,1,,AGA -> GCT,760,heme utilization protein CDS,,TCT -> AGC,500 -> 503,Substitution,None,WP_151141988.1,29.0% -> 29.3%,0.0
CATCACT,1094639,1094645,7,1,LVG -> HHW,TTGGTGG -> CATCACT,763,DUF808 domain-containing protein CDS,,"TTG,GTG,GGG -> CAT,CAC,TGG",307 -> 347,Substitution,Substitution,WP_151141000.1,34.6% -> 44.3%,4.6E-316
CGT,6789866,6789868,3,1,K -> R,AAG -> CGT,763,hutU CDS,hutU,AAG -> CGT,914 -> 916,Substitution,Substitution,WP_083350018.1,47.6% -> 47.8%,0.0
G,1704141,1704141,1,1,,C -> G,765,gudD CDS,gudD,CGG -> CGC,465,SNP (transversion),None,WP_151141484.1,63.7%,5.0E-146
C,1957571,1957571,1,1,,T -> C,765,MFS transporter CDS,,TTT -> TTC,465,SNP (transition),None,WP_151141766.1,57.6%,5.8E-50
C,3472236,3472236,1,1,,A -> C,765,vgrG CDS,vgrG,CTT -> CTG,224,SNP (transversion),None,WP_151142511.1,68.3%,2.9E-293
TGC,2441707,2441709,2,2,S -> A,GGA -> TGC,766,heme utilization protein CDS,,TCC -> GCA,498 -> 504,Substitution,Substitution,WP_151141988.1,31.5% -> 33.5%,0.0
C,1474102,1474102,1,1,,T -> C,771,AraC family transcriptional regulator CDS,,GGT -> GGC,535,SNP (transition),None,WP_083348600.1,35.7%,0.0
C,1704135,1704135,1,1,,T -> C,771,gudD CDS,gudD,CAA -> CAG,462,SNP (transition),None,WP_151141484.1,63.4%,6.4E-144
C,1960957,1960957,1,1,,T -> C,771,AraC family transcriptional regulator CDS,,GGT -> GGC,670,SNP (transition),None,WP_083348735.1,30.7%,0.0
ATCGA,1094648,1094652,4,2,VL -> IE,GTTCT -> ATCGA,772,DUF808 domain-containing protein CDS,,"GTT,CTG -> ATC,GAG",352 -> 369,Substitution,Substitution,WP_151141000.1,26.3% -> 32.7%,1.4E-239
CC,3472227,3472228,2,1,N -> R,AT -> CC,773,vgrG CDS,vgrG,AAT -> AGG,233 -> 235,Substitution,Substitution,WP_151142511.1,69.5% -> 70.2%,0.0
A,1704132,1704132,1,1,,G -> A,774,gudD CDS,gudD,CAC -> CAT,456,SNP (transition),None,WP_151141484.1,62.7%,4.3E-165
T,6213333,6213333,1,1,,G -> T,774,glutamine synthetase family protein CDS,,CCG -> CCT,585,SNP (transversion),None,WP_151143704.1,91.3%,0.0
G,1704129,1704129,1,1,,A -> G,777,gudD CDS,gudD,CAT -> CAC,446,SNP (transition),None,WP_151141484.1,64.6%,1.3E-144
C,6213336,6213336,1,1,,T -> C,777,glutamine synthetase family protein CDS,,TAT -> TAC,593,SNP (transition),None,WP_151143704.1,90.7%,0.0
G,1950733,1950733,1,1,,C -> G,780,molybdopterin cofactor-binding domain-containingprotein CDS,,GGC -> GGG,520,SNP (transversion),None,WP_151141759.1,65.8%,3.6E-207
A,1960966,1960966,1,1,,G -> A,780,AraC family transcriptional regulator CDS,,ACG -> ACA,640,SNP (transition),None,WP_083348735.1,28.1%,1.5E-305
G,6213339,6213339,1,1,,A -> G,780,glutamine synthetase family protein CDS,,CCA -> CCG,586,SNP (transition),None,WP_151143704.1,91.3%,0.0
G,1957587,1957587,1,1,S -> G,A -> G,781,MFS transporter CDS,,AGC -> GGC,457,SNP (transition),Substitution,WP_151141766.1,58.6%,2.4E-73
T,1950736,1950736,1,1,,G -> T,783,molybdopterin cofactor-binding domain-containingprotein CDS,,GTG -> GTT,514,SNP (transversion),None,WP_151141759.1,65.2%,8.4E-170
C,7238262,7238262,1,1,,G -> C,783,gabD CDS,gabD,CCG -> CCC,450,SNP (transversion),None,WP_151143983.1,100.0%,0.0
T,7238268,7238268,1,1,,C -> T,789,gabD CDS,gabD,ATC -> ATT,454,SNP (transition),None,WP_151143983.1,99.8%,0.0
C,6213351,6213351,1,1,,T -> C,792,glutamine synthetase family protein CDS,,GGT -> GGC,576,SNP (transition),None,WP_151143704.1,90.3%,0.0
A,1474126,1474126,1,1,,G -> A,795,AraC family transcriptional regulator CDS,,CAG -> CAA,492,SNP (transition),None,WP_083348600.1,34.8%,0.0
G,1950748,1950748,1,1,,C -> G,795,molybdopterin cofactor-binding domain-containingprotein CDS,,GTC -> GTG,474,SNP (transversion),None,WP_151141759.1,65.8%,3.6E-160
G,1457091,1457090,0,1,,(G)2 -> (G)3,798,molybdopterin cofactor-binding domain-containingprotein CDS,,,491,Insertion (tandem repeat),Frame Shift,,100.0%,3.2E-246
C,1474129,1474129,1,1,,T -> C,798,AraC family transcriptional regulator CDS,,CAT -> CAC,489,SNP (transition),None,WP_083348600.1,35.0%,0.0
T,7238277,7238277,1,1,,C -> T,798,gabD CDS,gabD,GAC -> GAT,447,SNP (transition),None,WP_151143983.1,99.6%,0.0
G,1396593,1396593,1,1,K -> E,A -> G,799,DUF6396 domain-containing protein CDS,,AAA -> GAA,357,SNP (transition),Substitution,WP_151141269.1,31.9%,6.3E-8
C,1474132,1474132,1,1,,T -> C,801,AraC family transcriptional regulator CDS,,ATT -> ATC,483,SNP (transition),None,WP_083348600.1,34.4%,0.0
A,1474135,1474135,1,1,,T -> A,804,AraC family transcriptional regulator CDS,,GGT -> GGA,481,SNP (transversion),None,WP_083348600.1,33.7%,0.0
T,2441671,2441671,1,1,N -> K,G -> T,804,heme utilization protein CDS,,AAC -> AAA,492,SNP (transversion),Substitution,WP_151141988.1,43.1%,0.0
T,7238283,7238283,1,1,,G -> T,804,gabD CDS,gabD,GCG -> GCT,447,SNP (transversion),None,WP_151143983.1,99.6%,0.0
G,6213366,6213366,1,1,,A -> G,807,glutamine synthetase family protein CDS,,GTA -> GTG,558,SNP (transition),None,WP_151143704.1,86.0%,0.0
TT,7238286,7238287,2,1,,CC -> TT,807,gabD CDS,gabD,"GAC,CTG -> GAT,TTG",449,Substitution,None,WP_151143983.1,98.9%,0.0
AGCAA,1396602,1396606,4,2,WR -> SK,TGGCG -> AGCAA,808,DUF6396 domain-containing protein CDS,,"TGG,CGA -> AGC,AAA",394 -> 410,Substitution,Substitution,WP_151141269.1,35.5% -> 36.6%,4.7E-13
AGCAA,7170328,7170332,4,2,WR -> SK,TGGCG -> AGCAA,808,DUF6396 domain-containing protein CDS,,"TGG,CGA -> AGC,AAA",397 -> 412,Substitution,Substitution,WP_151143968.1,37.0% -> 40.0%,1.0E-7
C,1957616,1957616,1,1,,A -> C,810,MFS transporter CDS,,ACA -> ACC,430,SNP (transversion),None,WP_151141766.1,63.5%,1.1E-109
C,3472191,3472191,1,1,,A -> C,810,vgrG CDS,vgrG,GGT -> GGG,230,SNP (transversion),None,WP_151142511.1,78.7%,0.0
TT,2441663,2441664,2,1,A -> N,GC -> TT,811,heme utilization protein CDS,,GCT -> AAT,481 -> 485,Substitution,Substitution,WP_151141988.1,37.8% -> 38.8%,0.0
GTG,1396608,1396610,2,2,I -> V,ATA -> GTG,814,DUF6396 domain-containing protein CDS,,ATA -> GTG,429 -> 439,Substitution,Substitution,WP_151141269.1,37.1% -> 38.0%,5.4E-18
GTG,7170334,7170336,2,2,I -> V,ATA -> GTG,814,DUF6396 domain-containing protein CDS,,ATA -> GTG,426 -> 431,Substitution,Substitution,WP_151143968.1,41.3% -> 42.0%,2.0E-13
G,1396613,1396613,1,1,,C -> G,819,DUF6396 domain-containing protein CDS,,CTC -> CTG,450,SNP (transversion),None,WP_151141269.1,39.6%,1.2E-21
A,1474150,1474150,1,1,,G -> A,819,AraC family transcriptional regulator CDS,,CAG -> CAA,465,SNP (transition),None,WP_083348600.1,32.5%,6.8E-313
G,2441656,2441656,1,1,,A -> G,819,heme utilization protein CDS,,AGT -> AGC,478,SNP (transition),None,WP_151141988.1,34.1%,0.0
G,7170339,7170339,1,1,,C -> G,819,DUF6396 domain-containing protein CDS,,CTC -> CTG,440,SNP (transversion),None,WP_151143968.1,43.2%,1.2E-16
T,7238298,7238298,1,1,,C -> T,819,gabD CDS,gabD,GCC -> GCT,459,SNP (transition),None,WP_151143983.1,99.8%,0.0
G,1396615,1396615,1,1,A -> G,C -> G,821,DUF6396 domain-containing protein CDS,,GCC -> GGC,464,SNP (transversion),Substitution,WP_151141269.1,39.4%,4.7E-22
G,7170341,7170341,1,1,A -> G,C -> G,821,DUF6396 domain-containing protein CDS,,GCC -> GGC,443,SNP (transversion),Substitution,WP_151143968.1,43.6%,2.4E-17
A,1900153,1900153,1,1,,G -> A,822,hutU CDS,hutU,TAC -> TAT,344,SNP (transition),None,WP_151141703.1,67.4%,4.0E-25
G,1950775,1950775,1,1,,A -> G,822,molybdopterin cofactor-binding domain-containingprotein CDS,,AAA -> AAG,458,SNP (transition),None,WP_151141759.1,64.8%,7.7E-150
T,1957628,1957628,1,1,,A -> T,822,MFS transporter CDS,,GGA -> GGT,420,SNP (transversion),None,WP_151141766.1,64.5%,2.1E-111
T,2441653,2441653,1,1,,A -> T,822,heme utilization protein CDS,,GGT -> GGA,484,SNP (transversion),None,WP_151141988.1,33.3%,0.0
A,1418601,1418601,1,1,,G -> A,825,hutU CDS,hutU,TAC -> TAT,349,SNP (transition),None,WP_151141280.1,68.5%,2.9E-12
C,1957631,1957631,1,1,,A -> C,825,MFS transporter CDS,,GCA -> GCC,434,SNP (transversion),None,WP_151141766.1,65.7%,5.2E-120
C,1396622,1396622,1,1,,T -> C,828,DUF6396 domain-containing protein CDS,,TAT -> TAC,499,SNP (transition),None,WP_151141269.1,42.9%,2.5E-31
G,1704078,1704078,1,1,,T -> G,828,gudD CDS,gudD,GGA -> GGC,473,SNP (transversion),None,WP_151141484.1,75.1%,4.4E-247
T,1950781,1950781,1,1,,C -> T,828,molybdopterin cofactor-binding domain-containingprotein CDS,,GGC -> GGT,466,SNP (transition),None,WP_151141759.1,63.5%,1.2E-145
G,2441647,2441647,1,1,,A -> G,828,heme utilization protein CDS,,AAT -> AAC,481,SNP (transition),None,WP_151141988.1,28.9%,0.0
A,6213387,6213387,1,1,,G -> A,828,glutamine synthetase family protein CDS,,AAG -> AAA,543,SNP (transition),None,WP_151143704.1,75.1%,6.1E-245
C,7170348,7170348,1,1,,T -> C,828,DUF6396 domain-containing protein CDS,,TAT -> TAC,469,SNP (transition),None,WP_151143968.1,46.3%,3.4E-23
A,171090,171090,1,1,,T -> A,831,LysR family transcriptional regulator CDS,,,8,SNP (transversion),Truncation,WP_057005185.1,100.0%,1.0E-8
G,1900144,1900144,1,1,,A -> G,831,hutU CDS,hutU,GCT -> GCC,337,SNP (transition),None,WP_151141703.1,65.6%,1.2E-21
C,6213390,6213390,1,1,E -> D,A -> C,831,glutamine synthetase family protein CDS,,GAA -> GAC,525,SNP (transversion),Substitution,WP_151143704.1,75.6%,2.6E-278
T,7170351,7170351,1,1,,C -> T,831,DUF6396 domain-containing protein CDS,,TCC -> TCT,477,SNP (transition),None,WP_151143968.1,26.2%,8.5E-16
CT,171092,171093,2,1,L -> S,TA -> CT,833,LysR family transcriptional regulator CDS,,TTA -> TCT,14 -> 19,Substitution,Substitution,WP_057005185.1,100.0%,1.6E-17
G,1418592,1418592,1,1,,A -> G,834,hutU CDS,hutU,GCT -> GCC,357,SNP (transition),None,WP_151141280.1,64.7%,1.9E-8
C,1704072,1704072,1,1,,T -> C,834,gudD CDS,gudD,GAA -> GAG,486,SNP (transition),None,WP_151141484.1,75.9%,6.1E-260
AGCATGG,171095,171101,7,1,PAK -> QHG,CAGCCAA -> AGCATGG,836,LysR family transcriptional regulator CDS,,"CCA,GCC,AAA -> CAG,CAT,GGA",22 -> 53,Substitution,Substitution,WP_057005185.1,100.0%,6.3E-36
C,1396631,1396631,1,1,,T -> C,837,DUF6396 domain-containing protein CDS,,GCT -> GCC,544,SNP (transition),None,WP_151141269.1,44.7%,8.3E-39
G,6213396,6213396,1,1,N -> K,C -> G,837,glutamine synthetase family protein CDS,,AAC -> AAG,507,SNP (transversion),Substitution,WP_151143704.1,76.7%,5.1E-277
C,7170357,7170357,1,1,,T -> C,837,DUF6396 domain-containing protein CDS,,GCT -> GCC,498,SNP (transition),None,WP_151143968.1,49.8%,2.7E-32
A,1396634,1396634,1,1,,G -> A,840,DUF6396 domain-containing protein CDS,,AAG -> AAA,559,SNP (transition),None,WP_151141269.1,45.3%,1.6E-41
T,6213399,6213399,1,1,,C -> T,840,glutamine synthetase family protein CDS,,AAC -> AAT,491,SNP (transition),None,WP_151143704.1,74.3%,2.0E-251
A,7170360,7170360,1,1,,G -> A,840,DUF6396 domain-containing protein CDS,,AAG -> AAA,503,SNP (transition),None,WP_151143968.1,50.1%,2.6E-33
A,1396637,1396637,1,1,,C -> A,843,DUF6396 domain-containing protein CDS,,CCC -> CCA,570,SNP (transversion),None,WP_151141269.1,44.2%,3.0E-39
T,1474174,1474174,1,1,,C -> T,843,AraC family transcriptional regulator CDS,,TAC -> TAT,422,SNP (transition),None,WP_083348600.1,26.1%,5.7E-282
T,6213402,6213402,1,1,,C -> T,843,glutamine synthetase family protein CDS,,ATC -> ATT,479,SNP (transition),None,WP_151143704.1,75.4%,2.4E-252
A,7170363,7170363,1,1,,C -> A,843,DUF6396 domain-containing protein CDS,,CCC -> CCA,509,SNP (transversion),None,WP_151143968.1,49.9%,3.3E-33
C,171104,171104,1,1,V -> A,T -> C,845,LysR family transcriptional regulator CDS,,GTA -> GCA,72,SNP (transition),Substitution,WP_057005185.1,100.0%,4.0E-195
C,1396640,1396640,1,1,K -> N,A -> C,846,DUF6396 domain-containing protein CDS,,AAA -> AAC,595,SNP (transversion),Substitution,WP_151141269.1,46.2%,4.1E-47
C,7170366,7170366,1,1,K -> N,A -> C,846,DUF6396 domain-containing protein CDS,,AAA -> AAC,527,SNP (transversion),Substitution,WP_151143968.1,51.8%,3.2E-59
T,7238325,7238325,1,1,,C -> T,846,gabD CDS,gabD,TAC -> TAT,411,SNP (transition),None,WP_151143983.1,99.8%,0.0
G,171106,171106,1,1,R -> G,C -> G,847,LysR family transcriptional regulator CDS,,CGT -> GGT,82,SNP (transversion),Substitution,WP_057005185.1,100.0%,2.5E-230
TA,171109,171110,2,1,L -> Y,CT -> TA,850,LysR family transcriptional regulator CDS,,CTT -> TAT,101 -> 104,Substitution,Substitution,WP_057005185.1,100.0%,1.6E-283
T,6213411,6213411,1,1,,C -> T,852,glutamine synthetase family protein CDS,,AGC -> AGT,440,SNP (transition),None,WP_151143704.1,72.5%,3.2E-214
A,171113,171112,0,1,,+A,854,LysR family transcriptional regulator CDS,,,121,Insertion,Frame Shift,WP_057005185.1,100.0%,0.0
T,7238334,7238334,1,1,,C -> T,855,gabD CDS,gabD,AAC -> AAT,383,SNP (transition),None,WP_151143983.1,96.6%,0.0
G,171116,171116,1,1,V -> G,T -> G,857,LysR family transcriptional regulator CDS,,GTC -> GGC,133,SNP (transversion),Substitution,WP_057005185.1,100.0%,0.0
A,1900117,1900117,1,1,,G -> A,858,hutU CDS,hutU,GCC -> GCT,350,SNP (transition),None,WP_151141703.1,58.9%,5.2E-13
T,7238337,7238337,1,1,,C -> T,858,gabD CDS,gabD,GGC -> GGT,380,SNP (transition),None,WP_151143983.1,94.7%,0.0
T,171119,171119,1,1,E -> V,A -> T,860,LysR family transcriptional regulator CDS,,GAG -> GTG,145,SNP (transversion),Substitution,WP_057005185.1,100.0%,0.0
G,1704045,1704045,1,1,,C -> G,861,gudD CDS,gudD,ACG -> ACC,481,SNP (transversion),None,WP_151141484.1,83.4%,0.0
A,7238340,7238340,1,1,,G -> A,861,gabD CDS,gabD,CAG -> CAA,379,SNP (transition),None,WP_151143983.1,92.9%,0.0
A,171121,171121,1,1,Y -> N,T -> A,862,LysR family transcriptional regulator CDS,,TAT -> AAT,157,SNP (transversion),Substitution,WP_057005185.1,100.0%,0.0
AGCC,171124,171127,4,1,LK -> SQ,CTTA -> AGCC,865,LysR family transcriptional regulator CDS,,"CTT,AAA -> AGC,CAA",175 -> 194,Substitution,Substitution,WP_057005185.1,99.4% -> 99.5%,0.0
C,1704036,1704036,1,1,,T -> C,870,gudD CDS,gudD,AAA -> AAG,483,SNP (transition),None,WP_151141484.1,85.7%,0.0
G,1950823,1950823,1,1,,A -> G,870,molybdopterin cofactor-binding domain-containingprotein CDS,,CAA -> CAG,430,SNP (transition),None,WP_151141759.1,64.4%,9.2E-139
AA,171131,171132,2,1,T -> K,CT -> AA,872,LysR family transcriptional regulator CDS,,ACT -> AAA,205 -> 210,Substitution,Substitution,WP_057005185.1,99.5%,0.0
C,7238352,7238352,1,1,,T -> C,873,gabD CDS,gabD,TGT -> TGC,363,SNP (transition),None,WP_151143983.1,91.2%,0.0
T,1396668,1396668,1,1,,C -> T,874,DUF6396 domain-containing protein CDS,,CTG -> TTG,738,SNP (transition),None,WP_151141269.1,51.9%,1.3E-82
T,7170394,7170394,1,1,,C -> T,874,DUF6396 domain-containing protein CDS,,CTG -> TTG,595,SNP (transition),None,WP_151143968.1,60.5%,1.8E-103
CGGT,171134,171137,4,1,LY -> SV,TATA -> CGGT,875,LysR family transcriptional regulator CDS,,"TTA,TAT -> TCG,GTT",217 -> 236,Substitution,Substitution,WP_057005185.1,99.6% -> 100.0%,0.0
G,1704030,1704030,1,1,,T -> G,876,gudD CDS,gudD,GCA -> GCC,470,SNP (transversion),None,WP_151141484.1,87.9%,0.0
A,1900099,1900099,1,1,,C -> A,876,hutU CDS,hutU,CCG -> CCT,382,SNP (transversion),None,WP_151141703.1,56.3%,6.0E-11
G,1900096,1900096,1,1,,T -> G,879,hutU CDS,hutU,GCA -> GCC,375,SNP (transversion),None,WP_151141703.1,54.9%,2.4E-9
T,7238358,7238358,1,1,,C -> T,879,gabD CDS,gabD,AAC -> AAT,366,SNP (transition),None,WP_151143983.1,88.8%,0.0
T,171139,171140,2,1,,AA -> T,880,LysR family transcriptional regulator CDS,,,247,Deletion,Frame Shift,WP_057005185.1,100.0%,0.0
C,1396676,1396676,1,1,,G -> C,882,DUF6396 domain-containing protein CDS,,CCG -> CCC,774,SNP (transversion),None,WP_151141269.1,54.4%,9.5E-134
A,1900093,1900093,1,1,,C -> A,882,hutU CDS,hutU,GCG -> GCT,382,SNP (transversion),None,WP_151141703.1,55.0%,1.6E-9
G,1950835,1950835,1,1,,T -> G,882,molybdopterin cofactor-binding domain-containingprotein CDS,,TCT -> TCG,442,SNP (transversion),None,WP_151141759.1,64.7%,5.6E-144
C,7170402,7170402,1,1,,G -> C,882,DUF6396 domain-containing protein CDS,,CCG -> CCC,620,SNP (transversion),None,WP_151143968.1,63.1%,1.2E-120
T,7238361,7238361,1,1,,C -> T,882,gabD CDS,gabD,CGC -> CGT,365,SNP (transition),None,WP_151143983.1,87.4%,0.0
GC,171143,171144,2,1,S -> C,CT -> GC,884,LysR family transcriptional regulator CDS,,TCT -> TGC,263 -> 266,Substitution,Substitution,WP_057005185.1,100.0%,0.0
C,1396679,1396679,1,1,,G -> C,885,DUF6396 domain-containing protein CDS,,GCG -> GCC,796,SNP (transversion),None,WP_151141269.1,55.4%,5.2E-144
C,7170405,7170405,1,1,,G -> C,885,DUF6396 domain-containing protein CDS,,GCG -> GCC,631,SNP (transversion),None,WP_151143968.1,63.1%,8.6E-123
GATACATGA,171146,171154,8,2,PDYW -> RYMR,CGGATTACT -> GATACATGA,887,LysR family transcriptional regulator CDS,,"CCG,GAT,TAC,TGG -> CGA,TAC,ATG,AGG",274 -> 304,Substitution,Substitution,WP_057005185.1,99.6% -> 99.7%,0.0
G,1704018,1704018,1,1,,A -> G,888,gudD CDS,gudD,ATT -> ATC,482,SNP (transition),None,WP_151141484.1,89.8%,0.0
AC,7170408,7170409,2,1,,GT -> AC,888,DUF6396 domain-containing protein CDS,,"AAG,TTG -> AAA,CTG",643 -> 644,Substitution,None,WP_151143968.1,37.0% -> 37.4%,1.3E-74
G,1957700,1957700,1,1,,A -> G,894,MFS transporter CDS,,CAA -> CAG,412,SNP (transition),None,WP_151141766.1,77.2%,3.9E-259
G,7238373,7238373,1,1,,A -> G,894,gabD CDS,gabD,CAA -> CAG,364,SNP (transition),None,WP_151143983.1,84.9%,0.0
C,1950850,1950850,1,1,,G -> C,897,molybdopterin cofactor-binding domain-containingprotein CDS,,GTG -> GTC,479,SNP (transversion),None,WP_151141759.1,63.7%,1.8E-150
T,7238376,7238376,1,1,,C -> T,897,gabD CDS,gabD,GAC -> GAT,369,SNP (transition),None,WP_151143983.1,84.0%,0.0
TATCGATG,171157,171164,6,3,ERP -> YRC,GAGAGGCC -> TATCGATG,898,LysR family transcriptional regulator CDS,,"GAG,AGG,CCC -> TAT,CGA,TGC",318 -> 342,Substitution,Substitution,WP_057005185.1,100.0%,0.0
A,1950856,1950856,1,1,,G -> A,903,molybdopterin cofactor-binding domain-containingprotein CDS,,GAG -> GAA,487,SNP (transition),None,WP_151141759.1,63.7%,7.6E-153
T,7238382,7238382,1,1,,C -> T,903,gabD CDS,gabD,GTC -> GTT,370,SNP (transition),None,WP_151143983.1,82.4%,0.0
C,1957710,1957710,1,1,M -> L,A -> C,904,MFS transporter CDS,,ATG -> CTG,419,SNP (transversion),Substitution,WP_151141766.1,78.8%,1.9E-306
T,1704000,1704000,1,1,,C -> T,906,gudD CDS,gudD,GAG -> GAA,488,SNP (transition),None,WP_151141484.1,92.0%,0.0
ATC,171166,171168,3,1,H -> I,CAT -> ATC,907,LysR family transcriptional regulator CDS,,CAT -> ATC,355 -> 369,Substitution,Substitution,WP_057005185.1,99.7%,0.0
ACA,7238389,7238391,2,2,A -> T,GCC -> ACA,910,gabD CDS,gabD,GCC -> ACA,376 -> 378,Substitution,Substitution,WP_151143983.1,77.5% -> 78.2%,0.0
C,1900063,1900063,1,1,,G -> C,912,hutU CDS,hutU,GCC -> GCG,392,SNP (transversion),None,WP_151141703.1,52.3%,2.0E-17
C,3686315,3686315,1,1,,T -> C,912,glutamine synthetase family protein CDS,,CTA -> CTG,435,SNP (transition),None,WP_151142592.1,67.8%,4.8E-270
A,7238400,7238400,1,1,,G -> A,921,gabD CDS,gabD,GAG -> GAA,376,SNP (transition),None,WP_151143983.1,76.3%,0.0
C,3686300,3686300,1,1,,A -> C,927,glutamine synthetase family protein CDS,,GCT -> GCG,428,SNP (transversion),None,WP_151142592.1,65.2%,5.4E-221
C,1950886,1950886,1,1,,T -> C,933,molybdopterin cofactor-binding domain-containingprotein CDS,,CGT -> CGC,585,SNP (transition),None,WP_151141759.1,63.2%,1.2E-180
A,3686294,3686294,1,1,,G -> A,933,glutamine synthetase family protein CDS,,CTC -> CTT,436,SNP (transition),None,WP_151142592.1,63.3%,2.3E-213
A,7238412,7238412,1,1,,G -> A,933,gabD CDS,gabD,GTG -> GTA,378,SNP (transition),None,WP_151143983.1,73.5%,0.0
T,1900040,1900040,1,1,A -> D,G -> T,935,hutU CDS,hutU,GCC -> GAC,407,SNP (transversion),Substitution,WP_151141703.1,53.8%,5.4E-35
C,1957745,1957745,1,1,,A -> C,939,MFS transporter CDS,,GGA -> GGC,425,SNP (transversion),None,WP_151141766.1,88.5%,0.0
C,7238418,7238418,1,1,,G -> C,939,gabD CDS,gabD,GTG -> GTC,377,SNP (transversion),None,WP_151143983.1,70.8%,3.0E-305
A,7170460,7170460,1,1,V -> I,G -> A,940,DUF6396 domain-containing protein CDS,,GTC -> ATC,622,SNP (transition),Substitution,WP_151143968.1,46.5%,9.1E-199
C,1900033,1900033,1,1,,T -> C,942,hutU CDS,hutU,CAA -> CAG,402,SNP (transition),None,WP_151141703.1,53.0%,8.2E-33
C,3653578,3653578,1,1,,T -> C,942,ImcF-related family protein CDS,,CCA -> CCG,330,SNP (transition),None,WP_225441837.1,59.1%,1.3E-12
C,1900030,1900030,1,1,,T -> C,945,hutU CDS,hutU,AAA -> AAG,407,SNP (transition),None,WP_151141703.1,52.1%,2.7E-31
C,7238424,7238424,1,1,K -> N,G -> C,945,gabD CDS,gabD,AAG -> AAC,389,SNP (transversion),Substitution,WP_151143983.1,70.4%,4.1E-312
G,1703958,1703958,1,1,,A -> G,948,gudD CDS,gudD,CTT -> CTC,490,SNP (transition),None,WP_151141484.1,99.8%,0.0
A,3686276,3686276,1,1,,G -> A,951,glutamine synthetase family protein CDS,,TCC -> TCT,425,SNP (transition),None,WP_151142592.1,62.4%,6.1E-228
C,7238436,7238436,1,1,,T -> C,957,gabD CDS,gabD,GGT -> GGC,397,SNP (transition),None,WP_151143983.1,67.5%,3.6E-297
T,7238439,7238439,1,1,,C -> T,960,gabD CDS,gabD,AAC -> AAT,394,SNP (transition),None,WP_151143983.1,66.8%,1.3E-289
T,1950919,1950919,1,1,,C -> T,966,molybdopterin cofactor-binding domain-containingprotein CDS,,GAC -> GAT,579,SNP (transition),None,WP_151141759.1,61.8%,4.5E-170
G,7238448,7238448,1,1,,A -> G,969,gabD CDS,gabD,GAA -> GAG,394,SNP (transition),None,WP_151143983.1,66.0%,9.4E-259
A,7238450,7238450,1,1,A -> E,C -> A,971,gabD CDS,gabD,GCA -> GAA,385,SNP (transversion),Substitution,WP_151143983.1,65.2%,8.5E-248
T,1703931,1703931,1,1,,C -> T,975,gudD CDS,gudD,CAG -> CAA,455,SNP (transition),None,WP_151141484.1,99.8%,0.0
G,3686249,3686249,1,1,,A -> G,978,glutamine synthetase family protein CDS,,TAT -> TAC,401,SNP (transition),None,WP_151142592.1,62.1%,1.3E-286
C,1467112,1467112,1,1,,T -> C,984,MFS transporter CDS,,ACT -> ACC,497,SNP (transition),None,WP_151141315.1,99.6%,0.0
A,7238463,7238463,1,1,,T -> A,984,gabD CDS,gabD,ACT -> ACA,407,SNP (transversion),None,WP_151143983.1,64.1%,2.7E-229
A,1467116,1467116,1,1,L -> M,T -> A,988,MFS transporter CDS,,TTG -> ATG,499,SNP (transversion),Substitution,WP_151141315.1,99.6%,0.0
G,1950943,1950943,1,1,,C -> G,990,molybdopterin cofactor-binding domain-containingprotein CDS,,CCC -> CCG,584,SNP (transversion),None,WP_151141759.1,65.1%,2.2E-227
A,1467121,1467121,1,1,,G -> A,993,MFS transporter CDS,,CTG -> CTA,498,SNP (transition),None,WP_151141315.1,98.4%,0.0
T,3686233,3686233,1,1,C -> S,A -> T,994,glutamine synthetase family protein CDS,,TGC -> AGC,412,SNP (transversion),Substitution,WP_151142592.1,64.3%,0.0
T,7238475,7238475,1,1,,C -> T,996,gabD CDS,gabD,ATC -> ATT,441,SNP (transition),None,WP_151143983.1,65.3%,2.1E-228
G,1950952,1950952,1,1,,A -> G,999,molybdopterin cofactor-binding domain-containingprotein CDS,,GCA -> GCG,599,SNP (transition),None,WP_151141759.1,65.6%,3.5E-312
T,1950955,1950955,1,1,,G -> T,1002,molybdopterin cofactor-binding domain-containingprotein CDS,,ACG -> ACT,597,SNP (transversion),None,WP_151141759.1,67.3%,0.0
GAC,3686222,3686224,2,2,L -> V,CAG -> GAC,1003,glutamine synthetase family protein CDS,,CTG -> GTC,410 -> 411,Substitution,Substitution,WP_151142592.1,64.5% -> 65.9%,0.0
T,1467133,1467133,1,1,,C -> T,1005,MFS transporter CDS,,ATC -> ATT,509,SNP (transition),None,WP_151141315.1,99.8%,0.0
A,1899967,1899967,1,1,,C -> A,1008,hutU CDS,hutU,GTG -> GTT,414,SNP (transversion),None,WP_151141703.1,52.4%,5.3E-66
A,3686213,3686213,1,1,,G -> A,1014,glutamine synthetase family protein CDS,,CGC -> CGT,403,SNP (transition),None,WP_151142592.1,67.0%,0.0
A,859493,859493,1,1,G -> S,G -> A,1018,vgrG CDS,vgrG,GGC -> AGC,412,SNP (transition),Substitution,WP_151140887.1,64.1%,1.7E-131
G,1899952,1899952,1,1,,A -> G,1023,hutU CDS,hutU,GAT -> GAC,405,SNP (transition),None,WP_151141703.1,52.8%,3.4E-84
C,3686203,3686203,1,1,I -> V,T -> C,1024,glutamine synthetase family protein CDS,,ATT -> GTT,406,SNP (transition),Substitution,WP_151142592.1,68.2%,0.0
A,7238505,7238505,1,1,,G -> A,1026,gabD CDS,gabD,GAG -> GAA,471,SNP (transition),None,WP_151143983.1,70.7%,2.2E-314
C,1899946,1899946,1,1,,T -> C,1029,hutU CDS,hutU,CCA -> CCG,409,SNP (transition),None,WP_151141703.1,51.8%,2.2E-81
A,1899943,1899943,1,1,,G -> A,1032,hutU CDS,hutU,GGC -> GGT,408,SNP (transition),None,WP_151141703.1,52.0%,1.2E-81
T,1950985,1950985,1,1,,G -> T,1032,molybdopterin cofactor-binding domain-containingprotein CDS,,GGG -> GGT,564,SNP (transversion),None,WP_151141759.1,75.0%,0.0
C,3686195,3686195,1,1,,T -> C,1032,glutamine synthetase family protein CDS,,GTA -> GTG,410,SNP (transition),None,WP_151142592.1,71.5%,0.0
C,1467163,1467163,1,1,,G -> C,1035,MFS transporter CDS,,CTG -> CTC,533,SNP (transversion),None,WP_151141315.1,99.6%,0.0
A,3686186,3686186,1,1,,G -> A,1041,glutamine synthetase family protein CDS,,GGC -> GGT,419,SNP (transition),None,WP_151142592.1,73.7%,0.0
CG,7238520,7238521,2,1,AL -> AV,AC -> CG,1041,gabD CDS,gabD,"GCA,CTG -> GCC,GTG",457 -> 460,Substitution,Substitution,WP_151143983.1,69.6% -> 69.8%,0.0
C,1899931,1899931,1,1,,G -> C,1044,hutU CDS,hutU,GCC -> GCG,432,SNP (transversion),None,WP_151141703.1,52.3%,1.1E-107
CGGT,3686180,3686183,3,2,SA -> SP,GGCG -> CGGT,1044,glutamine synthetase family protein CDS,,"TCC,GCC -> TCA,CCG",422 -> 427,Substitution,Substitution,WP_151142592.1,74.9% -> 75.8%,0.0
G,3686177,3686177,1,1,,A -> G,1050,glutamine synthetase family protein CDS,,GAT -> GAC,427,SNP (transition),None,WP_151142592.1,77.8%,0.0
C,1899919,1899919,1,1,,T -> C,1056,hutU CDS,hutU,CCA -> CCG,426,SNP (transition),None,WP_151141703.1,53.5%,3.1E-132
C,3686171,3686171,1,1,,T -> C,1056,glutamine synthetase family protein CDS,,GTA -> GTG,430,SNP (transition),None,WP_151142592.1,80.2%,0.0
A,859532,859532,1,1,G -> S,G -> A,1057,vgrG CDS,vgrG,GGC -> AGC,379,SNP (transition),Substitution,WP_151140887.1,57.0%,1.7E-56
G,3686168,3686168,1,1,,A -> G,1059,glutamine synthetase family protein CDS,,CGT -> CGC,430,SNP (transition),None,WP_151142592.1,80.9%,0.0
G,7238541,7238541,1,1,,A -> G,1062,gabD CDS,gabD,GTA -> GTG,457,SNP (transition),None,WP_151143983.1,74.6%,0.0
G,1951021,1951021,1,1,,C -> G,1068,molybdopterin cofactor-binding domain-containingprotein CDS,,CGC -> CGG,550,SNP (transversion),None,WP_151141759.1,81.8%,0.0
C,859546,859546,1,1,,T -> C,1071,vgrG CDS,vgrG,CGT -> CGC,366,SNP (transition),None,WP_151140887.1,56.8%,3.4E-54
C,7238550,7238550,1,1,,T -> C,1071,gabD CDS,gabD,GGT -> GGC,460,SNP (transition),None,WP_151143983.1,76.1%,0.0
A,3686147,3686147,1,1,,G -> A,1080,glutamine synthetase family protein CDS,,GGC -> GGT,444,SNP (transition),None,WP_151142592.1,86.3%,0.0
A,7238563,7238563,1,1,E -> K,G -> A,1084,gabD CDS,gabD,GAA -> AAA,472,SNP (transition),Substitution,WP_151143983.1,77.3%,0.0
G,3686141,3686141,1,1,,A -> G,1086,glutamine synthetase family protein CDS,,GAT -> GAC,439,SNP (transition),None,WP_151142592.1,87.7%,0.0
G,3721175,3721175,1,1,,A -> G,1086,gamma-aminobutyraldehyde dehydrogenase CDS,,CCA -> CCG,469,SNP (transition),None,WP_151142602.1,98.9%,0.0
G,1951044,1951044,1,1,P -> R,C -> G,1091,molybdopterin cofactor-binding domain-containingprotein CDS,,CCT -> CGT,566,SNP (transversion),Substitution,WP_151141759.1,81.1%,0.0
C,1899883,1899883,1,1,,A -> C,1092,hutU CDS,hutU,GCT -> GCG,447,SNP (transversion),None,WP_151141703.1,54.4%,1.1E-165
T,1957898,1957898,1,1,,C -> T,1092,MFS transporter CDS,,ATC -> ATT,478,SNP (transition),None,WP_151141766.1,99.8%,0.0
,1951046,1951046,1,1,,-T,1093,molybdopterin cofactor-binding domain-containingprotein CDS,,,564,Deletion,Frame Shift,WP_151141759.1,79.3%,0.0
T,1899880,1899880,1,1,,C -> T,1095,hutU CDS,hutU,GCG -> GCA,442,SNP (transition),None,WP_151141703.1,54.8%,5.4E-166
A,3686125,3686125,1,1,,G -> A,1102,glutamine synthetase family protein CDS,,CTG -> TTG,431,SNP (transition),None,WP_151142592.1,91.9%,0.0
G,7238583,7238583,1,1,,A -> G,1104,gabD CDS,gabD,CCA -> CCG,446,SNP (transition),None,WP_151143983.1,82.5%,0.0
GCGGATC,1899864,1899870,5,3,NAE -> DPQ,CAGCGTT -> GCGGATC,1105,hutU CDS,hutU,"AAC,GCT,GAA -> GAT,CCG,CAA",430 -> 440,Substitution,Substitution,WP_151141703.1,52.9% -> 53.7%,1.3E-173
A,1396903,1396903,1,1,R -> K,G -> A,1109,DUF6396 domain-containing protein CDS,,AGG -> AAG,924,SNP (transition),Substitution,WP_151141269.1,49.0%,0.0
T,1395075,1395075,1,1,,C -> T,1110,phospholipase D-like domain-containing protein CDS,,GCC -> GCT,377,SNP (transition),None,WP_151141266.1,47.5%,2.0E-61
A,1396905,1396905,1,1,V -> I,G -> A,1111,DUF6396 domain-containing protein CDS,,GTT -> ATT,915,SNP (transition),Substitution,WP_151141269.1,49.2%,0.0
C,1396910,1396910,1,1,,T -> C,1116,DUF6396 domain-containing protein CDS,,GGT -> GGC,910,SNP (transition),None,WP_151141269.1,50.3%,0.0
T,1396916,1396916,1,1,,C -> T,1122,DUF6396 domain-containing protein CDS,,CTC -> CTT,917,SNP (transition),None,WP_151141269.1,49.2%,0.0
G,7238601,7238601,1,1,,T -> G,1122,gabD CDS,gabD,GTT -> GTG,446,SNP (transversion),None,WP_151143983.1,85.0%,0.0
T,1957931,1957931,1,1,,C -> T,1125,MFS transporter CDS,,ATC -> ATT,479,SNP (transition),None,WP_151141766.1,99.0%,0.0
A,1395096,1395096,1,1,,G -> A,1131,phospholipase D-like domain-containing protein CDS,,AAG -> AAA,402,SNP (transition),None,WP_151141266.1,50.0%,2.9E-91
C,7238613,7238613,1,1,,T -> C,1134,gabD CDS,gabD,GCT -> GCC,442,SNP (transition),None,WP_151143983.1,88.5%,0.0
C,7238616,7238616,1,1,,A -> C,1137,gabD CDS,gabD,GCA -> GCC,447,SNP (transversion),None,WP_151143983.1,89.0%,0.0
G,1899835,1899835,1,1,,T -> G,1140,hutU CDS,hutU,GTA -> GTC,452,SNP (transversion),None,WP_151141703.1,56.9%,3.8E-256
C,1899832,1899832,1,1,,T -> C,1143,hutU CDS,hutU,AAA -> AAG,461,SNP (transition),None,WP_151141703.1,57.5%,7.5E-266
T,1899829,1899829,1,1,,C -> T,1146,hutU CDS,hutU,GAG -> GAA,460,SNP (transition),None,WP_151141703.1,57.2%,5.1E-212
G,1396941,1396941,1,1,W -> G,T -> G,1147,DUF6396 domain-containing protein CDS,,TGG -> GGG,914,SNP (transversion),Substitution,WP_151141269.1,49.0%,0.0
TGC,1957955,1957957,3,1,FS -> FA,CAG -> TGC,1149,MFS transporter CDS,,"TTC,AGC -> TTT,GCC",474 -> 477,Substitution,Substitution,WP_151141766.1,98.7% -> 98.9%,0.0
G,1899823,1899823,1,1,,A -> G,1152,hutU CDS,hutU,ATT -> ATC,459,SNP (transition),None,WP_151141703.1,58.6%,4.4E-273
A,1957964,1957964,1,1,,G -> A,1158,MFS transporter CDS,,GAG -> GAA,494,SNP (transition),None,WP_151141766.1,99.8%,0.0
G,1546742,1546742,1,1,N -> K,C -> G,1161,multicopper oxidase domain-containing protein CDS,,AAC -> AAG,493,SNP (transversion),Substitution,WP_151141371.1,99.2%,0.0
C,7238640,7238640,1,1,,T -> C,1161,gabD CDS,gabD,GGT -> GGC,436,SNP (transition),None,WP_151143983.1,93.6%,0.0
C,1899811,1899811,1,1,,G -> C,1164,hutU CDS,hutU,GCC -> GCG,450,SNP (transversion),None,WP_151141703.1,62.7%,0.0
A,1957970,1957970,1,1,,C -> A,1164,MFS transporter CDS,,CGC -> CGA,486,SNP (transversion),None,WP_151141766.1,99.6%,0.0
G,1546746,1546746,1,1,Q -> E,C -> G,1165,multicopper oxidase domain-containing protein CDS,,CAG -> GAG,485,SNP (transversion),Substitution,WP_151141371.1,98.8%,0.0
C,7238644,7238644,1,1,,T -> C,1165,gabD CDS,gabD,TTG -> CTG,444,SNP (transition),None,WP_151143983.1,94.6%,0.0
T,1546757,1546757,1,1,,C -> T,1176,multicopper oxidase domain-containing protein CDS,,CGC -> CGT,484,SNP (transition),None,WP_151141371.1,99.0%,0.0
C,1957982,1957982,1,1,,A -> C,1176,MFS transporter CDS,,ACA -> ACC,475,SNP (transversion),None,WP_151141766.1,99.6%,0.0
A,1546760,1546760,1,1,,G -> A,1179,multicopper oxidase domain-containing protein CDS,,GCG -> GCA,481,SNP (transition),None,WP_151141371.1,99.4%,0.0
G,1957985,1957985,1,1,,A -> G,1179,MFS transporter CDS,,GGA -> GGG,469,SNP (transition),None,WP_151141766.1,99.8%,0.0
A,3462131,3462131,1,1,,G -> A,1179,ImcF-related family protein CDS,,GCC -> GCT,430,SNP (transition),None,WP_191994403.1,25.8%,2.2E-162
C,3661825,3661825,1,1,,T -> C,1182,vgrG CDS,vgrG,CCA -> CCG,370,SNP (transition),None,WP_151142574.1,59.2%,1.0E-27
T,1546766,1546766,1,1,,C -> T,1185,multicopper oxidase domain-containing protein CDS,,TTC -> TTT,469,SNP (transition),None,WP_151141371.1,98.9%,0.0
G,3462125,3462125,1,1,,C -> G,1185,ImcF-related family protein CDS,,GTG -> GTC,437,SNP (transversion),None,WP_191994403.1,28.8%,4.8E-191
T,3661822,3661822,1,1,,G -> T,1185,vgrG CDS,vgrG,GCC -> GCA,374,SNP (transversion),None,WP_151142574.1,58.6%,7.9E-27
G,1546769,1546769,1,1,,T -> G,1188,multicopper oxidase domain-containing protein CDS,,CCT -> CCG,479,SNP (transversion),None,WP_151141371.1,99.0%,0.0
CGAC,3462119,3462122,3,2,QT -> QS,GGTT -> CGAC,1188,ImcF-related family protein CDS,,"CAA,ACC -> CAG,TCG",435 -> 437,Substitution,Substitution,WP_191994403.1,29.3% -> 29.9%,3.3E-208
G,1899784,1899784,1,1,,C -> G,1191,hutU CDS,hutU,GCG -> GCC,477,SNP (transversion),None,WP_151141703.1,67.5%,0.0
T,1957997,1957997,1,1,,C -> T,1191,MFS transporter CDS,,AAC -> AAT,466,SNP (transition),None,WP_151141766.1,98.9%,0.0
C,3462116,3462116,1,1,,G -> C,1194,ImcF-related family protein CDS,,TCC -> TCG,441,SNP (transversion),None,WP_191994403.1,31.3%,3.2E-242
T,1546781,1546781,1,1,,C -> T,1200,multicopper oxidase domain-containing protein CDS,,GGC -> GGT,473,SNP (transition),None,WP_151141371.1,99.4%,0.0
AAC,3462107,3462109,3,1,T -> V,GGT -> AAC,1201,ImcF-related family protein CDS,,ACC -> GTT,444 -> 452,Substitution,Substitution,WP_191994403.1,32.2% -> 33.0%,1.0E-244
G,1546784,1546784,1,1,,A -> G,1203,multicopper oxidase domain-containing protein CDS,,GAA -> GAG,470,SNP (transition),None,WP_151141371.1,99.4%,0.0
T,1958009,1958009,1,1,,C -> T,1203,MFS transporter CDS,,GCC -> GCT,497,SNP (transition),None,WP_151141766.1,99.8%,0.0
C,1958015,1958015,1,1,,T -> C,1209,MFS transporter CDS,,GGT -> GGC,498,SNP (transition),None,WP_151141766.1,99.8%,0.0
A,1958018,1958018,1,1,,C -> A,1212,MFS transporter CDS,,GGC -> GGA,500,SNP (transversion),None,WP_151141766.1,99.4%,0.0
C,7166189,7166189,1,1,,T -> C,1212,vgrG CDS,vgrG,CAT -> CAC,370,SNP (transition),None,WP_151143964.1,35.4%,1.7E-39
G,3471786,3471786,1,1,,A -> G,1215,vgrG CDS,vgrG,CAT -> CAC,308,SNP (transition),None,WP_151142511.1,41.2%,1.3E-46
A,3462086,3462086,1,1,,G -> A,1224,ImcF-related family protein CDS,,CGC -> CGT,475,SNP (transition),None,WP_191994403.1,38.1%,0.0
A,7166201,7166201,1,1,,C -> A,1224,vgrG CDS,vgrG,GCC -> GCA,370,SNP (transversion),None,WP_151143964.1,36.5%,2.6E-42
T,3471774,3471774,1,1,,G -> T,1227,vgrG CDS,vgrG,GCC -> GCA,318,SNP (transversion),None,WP_151142511.1,40.3%,1.3E-45
G,1958043,1958043,1,1,F -> V,T -> G,1237,MFS transporter CDS,,TTC -> GTC,505,SNP (transversion),Substitution,WP_151141766.1,99.4%,0.0
G,1899736,1899736,1,1,,A -> G,1239,hutU CDS,hutU,GTT -> GTC,450,SNP (transition),None,WP_151141703.1,80.7%,0.0
T,7166219,7166219,1,1,,C -> T,1242,vgrG CDS,vgrG,GGC -> GGT,368,SNP (transition),None,WP_151143964.1,39.7%,7.9E-51
A,3471756,3471756,1,1,,G -> A,1245,vgrG CDS,vgrG,GGC -> GGT,323,SNP (transition),None,WP_151142511.1,36.2%,1.9E-27
A,1899726,1899726,1,1,,G -> A,1249,hutU CDS,hutU,CTG -> TTG,447,SNP (transition),None,WP_151141703.1,83.4%,0.0
T,1899715,1899715,1,1,,C -> T,1260,hutU CDS,hutU,AAG -> AAA,444,SNP (transition),None,WP_151141703.1,86.9%,0.0
G,1899712,1899712,1,1,,C -> G,1263,hutU CDS,hutU,CTG -> CTC,436,SNP (transversion),None,WP_151141703.1,87.8%,0.0
C,3462047,3462047,1,1,,T -> C,1263,ImcF-related family protein CDS,,GAA -> GAG,507,SNP (transition),None,WP_191994403.1,36.1%,0.0
G,1951246,1951246,1,1,,A -> G,1293,molybdopterin cofactor-binding domain-containingprotein CDS,,GCA -> GCG,544,SNP (transition),None,WP_151141759.1,93.8%,0.0
CG,1951248,1951249,2,1,V -> A,TC -> CG,1295,molybdopterin cofactor-binding domain-containingprotein CDS,,GTC -> GCG,538 -> 541,Substitution,Substitution,WP_151141759.1,93.0% -> 93.3%,0.0
G,859772,859772,1,1,T -> A,A -> G,1297,vgrG CDS,vgrG,ACC -> GCC,346,SNP (transition),Substitution,WP_151140887.1,48.8%,2.4E-60
A,859780,859780,1,1,,G -> A,1305,vgrG CDS,vgrG,CTG -> CTA,341,SNP (transition),None,WP_151140887.1,50.4%,4.7E-64
G,7166285,7166285,1,1,,A -> G,1308,vgrG CDS,vgrG,CTA -> CTG,382,SNP (transition),None,WP_151143964.1,53.7%,1.5E-138
C,3471690,3471690,1,1,,T -> C,1311,vgrG CDS,vgrG,CTA -> CTG,357,SNP (transition),None,WP_151142511.1,32.2%,3.3E-8
C,1926922,1926922,1,1,S -> A,A -> C,1312,copper resistance system multicopper oxidase CDS,,TCG -> GCG,1118,SNP (transversion),Substitution,WP_151141743.1,31.2%,0.0
A,859792,859792,1,1,,G -> A,1317,vgrG CDS,vgrG,CGG -> CGA,335,SNP (transition),None,WP_151140887.1,51.6%,1.1E-81
T,1926917,1926917,1,1,,G -> T,1317,copper resistance system multicopper oxidase CDS,,GGC -> GGA,1128,SNP (transversion),None,WP_151141743.1,34.4%,0.0
A,1926915,1926915,1,1,K -> M,T -> A,1319,copper resistance system multicopper oxidase CDS,,AAG -> ATG,1126,SNP (transversion),Substitution,WP_151141743.1,36.0%,0.0
C,859795,859795,1,1,,T -> C,1320,vgrG CDS,vgrG,CCT -> CCC,333,SNP (transition),None,WP_151140887.1,52.6%,3.2E-84
A,1951279,1951279,1,1,,G -> A,1326,molybdopterin cofactor-binding domain-containingprotein CDS,,AAG -> AAA,537,SNP (transition),None,WP_151141759.1,88.1%,0.0
G,1899640,1899640,1,1,,C -> G,1335,hutU CDS,hutU,CTG -> CTC,383,SNP (transversion),None,WP_151141703.1,99.2%,0.0
G,1899631,1899631,1,1,,A -> G,1344,hutU CDS,hutU,GGT -> GGC,372,SNP (transition),None,WP_151141703.1,99.5%,0.0
C,1899628,1899628,1,1,,A -> C,1347,hutU CDS,hutU,TCT -> TCG,366,SNP (transversion),None,WP_151141703.1,99.5%,0.0
G,1951309,1951309,1,1,,A -> G,1356,molybdopterin cofactor-binding domain-containingprotein CDS,,CGA -> CGG,500,SNP (transition),None,WP_151141759.1,84.0%,0.0
A,1899610,1899610,1,1,,G -> A,1365,hutU CDS,hutU,CGC -> CGT,354,SNP (transition),None,WP_151141703.1,98.6%,0.0
T,1951321,1951321,1,1,,C -> T,1368,molybdopterin cofactor-binding domain-containingprotein CDS,,ATC -> ATT,494,SNP (transition),None,WP_151141759.1,81.0%,0.0
C,7169068,7169068,1,1,,T -> C,1377,phospholipase D-like domain-containing protein CDS,,GCT -> GCC,847,SNP (transition),None,WP_151143966.1,48.3%,0.0
AC,1457673,1457672,0,1,,+AC,1380,molybdopterin cofactor-binding domain-containingprotein CDS,,,441 -> 443,Insertion,Frame Shift,,99.3%,0.0
G,1951333,1951333,1,1,,C -> G,1380,molybdopterin cofactor-binding domain-containingprotein CDS,,GCC -> GCG,488,SNP (transversion),None,WP_151141759.1,79.5%,0.0
A,1899589,1899589,1,1,,G -> A,1386,hutU CDS,hutU,GAC -> GAT,355,SNP (transition),None,WP_151141703.1,99.4%,0.0
A,3461923,3461923,1,1,,G -> A,1387,ImcF-related family protein CDS,,CTG -> TTG,528,SNP (transition),None,WP_191994403.1,28.8%,3.6E-126
G,1951345,1951345,1,1,,C -> G,1392,molybdopterin cofactor-binding domain-containingprotein CDS,,CCC -> CCG,488,SNP (transversion),None,WP_151141759.1,78.9%,0.0
CC,3461908,3461909,2,1,AM -> AV,TG -> CC,1401,ImcF-related family protein CDS,,"GCC,ATG -> GCG,GTG",492 -> 495,Substitution,Substitution,WP_191994403.1,29.3% -> 29.5%,1.0E-124
C,1951363,1951363,1,1,,T -> C,1410,molybdopterin cofactor-binding domain-containingprotein CDS,,GGT -> GGC,489,SNP (transition),None,WP_151141759.1,78.3%,0.0
G,3461872,3461872,1,1,K -> Q,T -> G,1438,ImcF-related family protein CDS,,AAG -> CAG,462,SNP (transversion),Substitution,WP_191994403.1,27.1%,2.0E-136
C,2094681,2094681,1,1,,T -> C,1455,multicopper oxidase domain-containing protein CDS,,GGT -> GGC,519,SNP (transition),None,WP_083348799.1,99.2%,0.0
T,1395423,1395423,1,1,,C -> T,1458,phospholipase D-like domain-containing protein CDS,,TGC -> TGT,458,SNP (transition),None,WP_151141266.1,60.7%,0.0
A,5705039,5705039,1,1,,G -> A,1459,efflux RND transporter periplasmic adaptor subunit CDS,,CTG -> TTG,488,SNP (transition),None,WP_151143414.1,98.6%,0.0
G,1496275,1496275,1,1,,A -> G,1461,acs CDS,acs,ACT -> ACC,315,SNP (transition),None,WP_083350135.1,69.8%,2.3E-101
T,2094687,2094687,1,1,,C -> T,1461,multicopper oxidase domain-containing protein CDS,,CGC -> CGT,511,SNP (transition),None,WP_083348799.1,100.0%,0.0
C,1951420,1951420,1,1,,T -> C,1467,molybdopterin cofactor-binding domain-containingprotein CDS,,GGT -> GGC,546,SNP (transition),None,WP_151141759.1,84.2%,0.0
T,2094693,2094693,1,1,,C -> T,1467,multicopper oxidase domain-containing protein CDS,,TAC -> TAT,515,SNP (transition),None,WP_083348799.1,99.6%,0.0
T,5705030,5705030,1,1,S -> T,A -> T,1468,efflux RND transporter periplasmic adaptor subunit CDS,,TCG -> ACG,478,SNP (transversion),Substitution,WP_151143414.1,98.3%,0.0
CC,5705024,5705025,2,1,GR -> GG,TT -> CC,1473,efflux RND transporter periplasmic adaptor subunit CDS,,"GGA,AGG -> GGG,GGG",481 -> 487,Substitution,Substitution,WP_151143414.1,97.5% -> 97.7%,0.0
G,7169182,7169182,1,1,,A -> G,1491,phospholipase D-like domain-containing protein CDS,,CAA -> CAG,704,SNP (transition),None,WP_151143966.1,43.2%,0.0
A,1951450,1951450,1,1,,C -> A,1497,molybdopterin cofactor-binding domain-containingprotein CDS,,GGC -> GGA,599,SNP (transversion),None,WP_151141759.1,88.5%,0.0
A,1496194,1496194,1,1,,G -> A,1542,acs CDS,acs,GGC -> GGT,359,SNP (transition),None,WP_083350135.1,82.7%,4.6E-230
G,1496170,1496170,1,1,,C -> G,1566,acs CDS,acs,GTG -> GTC,377,SNP (transversion),None,WP_083350135.1,87.0%,0.0
G,1457873,1457872,0,1,,(G)4 -> (G)5,1580,molybdopterin cofactor-binding domain-containingprotein CDS,,,479,Insertion (tandem repeat),Frame Shift,,99.6%,0.0
GC,1457877,1457876,0,1,,+GC,1584,molybdopterin cofactor-binding domain-containingprotein CDS,,,473 -> 475,Insertion,Frame Shift,,99.6%,0.0
C,1496092,1496092,1,1,,G -> C,1644,acs CDS,acs,GTC -> GTG,355,SNP (transversion),None,WP_083350135.1,100.0%,0.0
A,3461662,3461662,1,1,,G -> A,1648,ImcF-related family protein CDS,,CTG -> TTG,438,SNP (transition),None,WP_191994403.1,34.2%,0.0
CGGC,3461633,3461636,3,2,IA -> MP,TGCG -> CGGC,1674,ImcF-related family protein CDS,,"ATC,GCA -> ATG,CCG",488 -> 491,Substitution,Substitution,WP_191994403.1,37.3% -> 38.0%,0.0
A,3461627,3461627,1,1,,G -> A,1683,ImcF-related family protein CDS,,GAC -> GAT,482,SNP (transition),None,WP_191994403.1,37.1%,0.0
C,3461624,3461624,1,1,,A -> C,1686,ImcF-related family protein CDS,,CCT -> CCG,471,SNP (transversion),None,WP_191994403.1,37.2%,0.0
GCG,1395664,1395666,3,1,L -> A,TTA -> GCG,1699,phospholipase D-like domain-containing protein CDS,,TTA -> GCG,437 -> 448,Substitution,Substitution,WP_151141266.1,58.6% -> 59.6%,2.5E-33
GCG,7169390,7169392,3,1,L -> A,TTA -> GCG,1699,phospholipase D-like domain-containing protein CDS,,TTA -> GCG,463 -> 475,Substitution,Substitution,WP_151143966.1,54.0% -> 55.0%,4.9E-40
G,3652816,3652816,1,1,,A -> G,1704,ImcF-related family protein CDS,,GGT -> GGC,218,SNP (transition),None,WP_225441837.1,66.5%,7.3E-7
,1457999,1457999,1,1,,-T,1706,molybdopterin cofactor-binding domain-containingprotein CDS,,,464,Deletion,Frame Shift,,100.0%,0.0
C,867857,867857,1,1,,T -> C,1707,ImcF-related family protein CDS,,GGT -> GGC,225,SNP (transition),None,WP_151140895.1,69.8%,1.7E-9
T,1395693,1395693,1,1,M -> I,G -> T,1728,phospholipase D-like domain-containing protein CDS,,ATG -> ATT,494,SNP (transversion),Substitution,WP_151141266.1,38.3%,8.3E-11
CA,1395696,1395697,2,1,KE -> NK,AG -> CA,1731,phospholipase D-like domain-containing protein CDS,,"AAA,GAA -> AAC,AAA",487,Substitution,Substitution,WP_151141266.1,38.6% -> 39.0%,3.9E-11
T,1395702,1395702,1,1,,C -> T,1737,phospholipase D-like domain-containing protein CDS,,AAC -> AAT,488,SNP (transition),None,WP_151141266.1,39.1%,6.8E-12
G,1395704,1395704,1,1,K -> R,A -> G,1739,phospholipase D-like domain-containing protein CDS,,AAA -> AGA,488,SNP (transition),Substitution,WP_151141266.1,38.9%,4.4E-22
GAT,1395715,1395717,2,2,K -> D,AAG -> GAT,1750,phospholipase D-like domain-containing protein CDS,,AAG -> GAT,525 -> 534,Substitution,Substitution,WP_151141266.1,39.0% -> 39.6%,5.4E-25
T,1395725,1395725,1,1,G -> V,G -> T,1760,phospholipase D-like domain-containing protein CDS,,GGT -> GTT,544,SNP (transversion),Substitution,WP_151141266.1,62.1%,7.0E-102
T,7169451,7169451,1,1,G -> V,G -> T,1760,phospholipase D-like domain-containing protein CDS,,GGT -> GTT,557,SNP (transversion),Substitution,WP_151143966.1,53.5%,4.7E-11
G,1395727,1395727,1,1,M -> V,A -> G,1762,phospholipase D-like domain-containing protein CDS,,ATG -> GTG,547,SNP (transition),Substitution,WP_151141266.1,40.6%,2.2E-28
AGCG,1395732,1395735,3,2,GT -> GA,TACA -> AGCG,1767,phospholipase D-like domain-containing protein CDS,,"GGT,ACA -> GGA,GCG",555 -> 559,Substitution,Substitution,WP_151141266.1,39.5% -> 40.3%,8.7E-28
C,1395745,1395745,1,1,S -> P,T -> C,1780,phospholipase D-like domain-containing protein CDS,,TCC -> CCC,586,SNP (transition),Substitution,WP_151141266.1,42.8%,2.5E-36
T,1395750,1395750,1,1,,C -> T,1785,phospholipase D-like domain-containing protein CDS,,CTC -> CTT,595,SNP (transition),None,WP_151141266.1,42.2%,4.9E-35
A,1395756,1395756,1,1,,G -> A,1791,phospholipase D-like domain-containing protein CDS,,GAG -> GAA,608,SNP (transition),None,WP_151141266.1,67.1%,8.3E-140
A,7169482,7169482,1,1,,G -> A,1791,phospholipase D-like domain-containing protein CDS,,GAG -> GAA,654,SNP (transition),None,WP_151143966.1,55.7%,2.1E-16
T,1458086,1458085,0,1,,(T)4 -> (T)5,1793,molybdopterin cofactor-binding domain-containingprotein CDS,,,444,Insertion (tandem repeat),Frame Shift,,98.9%,0.0
C,1395762,1395762,1,1,,T -> C,1797,phospholipase D-like domain-containing protein CDS,,TAT -> TAC,622,SNP (transition),None,WP_151141266.1,44.2%,1.1E-62
G,1395771,1395771,1,1,,A -> G,1806,phospholipase D-like domain-containing protein CDS,,AAA -> AAG,644,SNP (transition),None,WP_151141266.1,45.5%,2.3E-48
G,1458101,1458100,0,1,,(G)3 -> (G)4,1808,molybdopterin cofactor-binding domain-containingprotein CDS,,,451,Insertion (tandem repeat),Frame Shift,,100.0%,0.0
G,1458103,1458102,0,1,,+G,1810,molybdopterin cofactor-binding domain-containingprotein CDS,,,453,Insertion,Frame Shift,,99.8%,0.0
T,3461467,3461467,1,1,F -> I,A -> T,1843,ImcF-related family protein CDS,,TTC -> ATC,319,SNP (transversion),Substitution,WP_191994403.1,38.6%,8.5E-63
A,3461390,3461390,1,1,,G -> A,1920,ImcF-related family protein CDS,,GCC -> GCT,266,SNP (transition),None,WP_191994403.1,38.7%,7.1E-7
A,982564,982564,1,1,,C -> A,1995,retention module-containing protein CDS,,GGC -> GGA,853,SNP (transversion),None,WP_151140951.1,30.5%,0.0
T,1951957,1951957,1,1,,C -> T,2004,molybdopterin cofactor-binding domain-containingprotein CDS,,GGC -> GGT,592,SNP (transition),None,WP_151141759.1,65.0%,1.3E-303
G,982606,982606,1,1,,C -> G,2037,retention module-containing protein CDS,,ACC -> ACG,875,SNP (transversion),None,WP_151140951.1,52.0%,0.0
A,982618,982618,1,1,,G -> A,2049,retention module-containing protein CDS,,GCG -> GCA,891,SNP (transition),None,WP_151140951.1,43.2%,0.0
C,982627,982627,1,1,,G -> C,2058,retention module-containing protein CDS,,GCG -> GCC,917,SNP (transversion),None,WP_151140951.1,41.9%,0.0
G,982628,982628,1,1,L -> V,C -> G,2059,retention module-containing protein CDS,,CTG -> GTG,917,SNP (transversion),Substitution,WP_151140951.1,46.8%,0.0
G,982651,982651,1,1,,A -> G,2082,retention module-containing protein CDS,,TCA -> TCG,953,SNP (transition),None,WP_151140951.1,41.4%,0.0
C,982666,982666,1,1,,T -> C,2097,retention module-containing protein CDS,,GGT -> GGC,971,SNP (transition),None,WP_151140951.1,41.9%,0.0
T,982675,982675,1,1,,C -> T,2106,retention module-containing protein CDS,,GAC -> GAT,972,SNP (transition),None,WP_151140951.1,38.0%,0.0
G,3464933,3464933,1,1,V -> A,A -> G,2120,DUF2235 domain-containing protein CDS,,GTG -> GCG,344,SNP (transition),Substitution,WP_151142501.1,99.1%,0.0
C,982691,982691,1,1,,T -> C,2122,retention module-containing protein CDS,,TTG -> CTG,923,SNP (transition),None,WP_151140951.1,40.5%,0.0
C,982696,982696,1,1,,T -> C,2127,retention module-containing protein CDS,,CGT -> CGC,926,SNP (transition),None,WP_151140951.1,40.8%,0.0
CC,982701,982702,2,1,G -> A,GT -> CC,2132,retention module-containing protein CDS,,GGT -> GCC,931 -> 937,Substitution,Substitution,WP_151140951.1,40.4% -> 40.8%,0.0
T,4014240,4014240,1,1,,C -> T,2139,gcvP CDS,gcvP,GGC -> GGT,348,SNP (transition),None,WP_151142738.1,46.8%,2.3E-9
T,982711,982711,1,1,,C -> T,2142,retention module-containing protein CDS,,GAC -> GAT,919,SNP (transition),None,WP_151140951.1,34.9%,0.0
GTG,982727,982729,2,2,I -> V,ATC -> GTG,2158,retention module-containing protein CDS,,ATC -> GTG,903 -> 913,Substitution,Substitution,WP_151140951.1,35.0% -> 35.2%,0.0
C,982731,982731,1,1,I -> T,T -> C,2162,retention module-containing protein CDS,,ATC -> ACC,900,SNP (transition),Substitution,WP_151140951.1,40.7%,0.0
G,982762,982762,1,1,,A -> G,2193,retention module-containing protein CDS,,GCA -> GCG,906,SNP (transition),None,WP_151140951.1,38.7%,0.0
T,1952155,1952155,1,1,,C -> T,2202,molybdopterin cofactor-binding domain-containingprotein CDS,,TAC -> TAT,721,SNP (transition),None,WP_151141759.1,52.7%,0.0
T,982774,982774,1,1,Q -> H,G -> T,2205,retention module-containing protein CDS,,CAG -> CAT,839,SNP (transversion),Substitution,WP_151140951.1,30.6%,0.0
T,982780,982780,1,1,,C -> T,2211,retention module-containing protein CDS,,GTC -> GTT,822,SNP (transition),None,WP_151140951.1,28.1%,0.0
C,982786,982786,1,1,,G -> C,2217,retention module-containing protein CDS,,GTG -> GTC,806,SNP (transversion),None,WP_151140951.1,32.6%,0.0
A,982811,982811,1,1,C -> S,T -> A,2242,retention module-containing protein CDS,,TGC -> AGC,955,SNP (transversion),Substitution,WP_151140951.1,31.4%,0.0
G,982815,982815,1,1,N -> S,A -> G,2246,retention module-containing protein CDS,,AAC -> AGC,960,SNP (transition),Substitution,WP_151140951.1,33.6%,0.0
G,982817,982817,1,1,T -> A,A -> G,2248,retention module-containing protein CDS,,ACC -> GCC,970,SNP (transition),Substitution,WP_151140951.1,26.9%,0.0
C,982827,982827,1,1,I -> T,T -> C,2258,retention module-containing protein CDS,,ATC -> ACC,998,SNP (transition),Substitution,WP_151140951.1,41.7%,0.0
C,982834,982834,1,1,,T -> C,2265,retention module-containing protein CDS,,AGT -> AGC,1018,SNP (transition),None,WP_151140951.1,45.3%,0.0
C,1458560,1458559,0,1,,+C,2267,molybdopterin cofactor-binding domain-containingprotein CDS,,,9,Insertion,Frame Shift,,100.0%,1.6E-11
G,1458562,1458561,0,1,,(G)4 -> (G)5,2269,molybdopterin cofactor-binding domain-containingprotein CDS,,,17,Insertion (tandem repeat),Frame Shift,,100.0%,1.3E-12
C,982849,982849,1,1,,T -> C,2280,retention module-containing protein CDS,,GGT -> GGC,1128,SNP (transition),None,WP_151140951.1,50.3%,0.0
T,982850,982850,1,1,A -> S,G -> T,2281,retention module-containing protein CDS,,GCG -> TCG,1125,SNP (transversion),Substitution,WP_151140951.1,26.0%,0.0
T,982855,982855,1,1,,C -> T,2286,retention module-containing protein CDS,,GTC -> GTT,1181,SNP (transition),None,WP_151140951.1,25.1%,0.0
C,982858,982858,1,1,,T -> C,2289,retention module-containing protein CDS,,CAT -> CAC,1213,SNP (transition),None,WP_151140951.1,26.0%,0.0
T,982861,982861,1,1,,C -> T,2292,retention module-containing protein CDS,,GGC -> GGT,1243,SNP (transition),None,WP_151140951.1,27.6%,0.0
C,982863,982863,1,1,G -> A,G -> C,2294,retention module-containing protein CDS,,GGC -> GCC,1255,SNP (transversion),Substitution,WP_151140951.1,28.0%,0.0
T,982867,982867,1,1,,C -> T,2298,retention module-containing protein CDS,,AGC -> AGT,1286,SNP (transition),None,WP_151140951.1,28.5%,0.0
T,982870,982870,1,1,,C -> T,2301,retention module-containing protein CDS,,GGC -> GGT,1300,SNP (transition),None,WP_151140951.1,27.4%,0.0
C,982889,982889,1,1,V -> L,G -> C,2320,retention module-containing protein CDS,,GTC -> CTC,1455,SNP (transversion),Substitution,WP_151140951.1,61.1%,0.0
G,3652200,3652200,1,1,T -> P,T -> G,2320,ImcF-related family protein CDS,,ACC -> CCC,358,SNP (transversion),Substitution,WP_225441837.1,68.2%,3.7E-12
C,868473,868473,1,1,T -> P,A -> C,2323,ImcF-related family protein CDS,,ACC -> CCC,348,SNP (transversion),Substitution,WP_151140895.1,67.2%,7.8E-11
T,982897,982897,1,1,,C -> T,2328,retention module-containing protein CDS,,AAC -> AAT,1509,SNP (transition),None,WP_151140951.1,31.0%,0.0
T,982906,982906,1,1,,C -> T,2337,retention module-containing protein CDS,,GGC -> GGT,1542,SNP (transition),None,WP_151140951.1,31.7%,0.0
G,3460963,3460963,1,1,T -> P,T -> G,2347,ImcF-related family protein CDS,,ACC -> CCC,361,SNP (transversion),Substitution,WP_191994403.1,65.7%,1.8E-9
G,982918,982918,1,1,,A -> G,2349,retention module-containing protein CDS,,CAA -> CAG,1618,SNP (transition),None,WP_151140951.1,33.2%,0.0
T,982922,982922,1,1,,C -> T,2353,retention module-containing protein CDS,,CTG -> TTG,1630,SNP (transition),None,WP_151140951.1,33.9%,0.0
A,982927,982927,1,1,,G -> A,2358,retention module-containing protein CDS,,CTG -> CTA,1665,SNP (transition),None,WP_151140951.1,34.5%,0.0
C,982928,982928,1,1,N -> H,A -> C,2359,retention module-containing protein CDS,,AAC -> CAC,1674,SNP (transversion),Substitution,WP_151140951.1,66.4%,0.0
C,982931,982931,1,1,S -> P,T -> C,2362,retention module-containing protein CDS,,TCC -> CCC,1690,SNP (transition),Substitution,WP_151140951.1,66.2%,0.0
CGCTGGC,982957,982963,6,2,LTS -> LAG,GACCTCA -> CGCTGGC,2388,retention module-containing protein CDS,,"CTG,ACC,TCA -> CTC,GCT,GGC",1594 -> 1611,Substitution,Substitution,WP_151140951.1,28.9% -> 29.8%,0.0
T,2324065,2324065,1,1,L -> M,G -> T,2389,CheR family methyltransferase CDS,,CTG -> ATG,493,SNP (transversion),Substitution,WP_151141940.1,99.6%,0.0
C,982977,982977,1,1,M -> T,T -> C,2408,retention module-containing protein CDS,,ATG -> ACG,1614,SNP (transition),Substitution,WP_151140951.1,29.3%,0.0
GC,982982,982983,2,1,Q -> A,CA -> GC,2413,retention module-containing protein CDS,,CAG -> GCG,1612 -> 1614,Substitution,Substitution,WP_151140951.1,28.9% -> 29.0%,0.0
T,982986,982986,1,1,A -> V,C -> T,2417,retention module-containing protein CDS,,GCC -> GTC,1632,SNP (transition),Substitution,WP_151140951.1,35.3%,0.0
G,2324035,2324035,1,1,E -> Q,C -> G,2419,CheR family methyltransferase CDS,,GAG -> CAG,517,SNP (transversion),Substitution,WP_151141940.1,91.5%,0.0
T,982993,982993,1,1,,C -> T,2424,retention module-containing protein CDS,,GAC -> GAT,1637,SNP (transition),None,WP_151140951.1,35.2%,0.0
G,2324028,2324028,1,1,V -> A,A -> G,2426,CheR family methyltransferase CDS,,GTC -> GCC,522,SNP (transition),Substitution,WP_151141940.1,88.9%,0.0
T,982996,982996,1,1,,C -> T,2427,retention module-containing protein CDS,,GGC -> GGT,1631,SNP (transition),None,WP_151140951.1,35.4%,0.0
C,982998,982998,1,1,G -> A,G -> C,2429,retention module-containing protein CDS,,GGC -> GCC,1629,SNP (transversion),Substitution,WP_151140951.1,63.4%,0.0
T,1952386,1952386,1,1,,C -> T,2433,molybdopterin cofactor-binding domain-containingprotein CDS,,GCC -> GCT,389,SNP (transition),None,WP_151141759.1,46.5%,4.4E-32
G,2324021,2324021,1,1,,A -> G,2433,CheR family methyltransferase CDS,,GAT -> GAC,527,SNP (transition),None,WP_151141940.1,88.4%,0.0
G,2324016,2324016,1,1,E -> A,T -> G,2438,CheR family methyltransferase CDS,,GAG -> GCG,531,SNP (transversion),Substitution,WP_151141940.1,87.0%,0.0
G,983011,983011,1,1,H -> Q,C -> G,2442,retention module-containing protein CDS,,CAC -> CAG,1594,SNP (transversion),Substitution,WP_151140951.1,28.2%,0.0
G,2324012,2324012,1,1,,C -> G,2442,CheR family methyltransferase CDS,,ACG -> ACC,524,SNP (transversion),None,WP_151141940.1,86.1%,0.0
G,2324009,2324009,1,1,,A -> G,2445,CheR family methyltransferase CDS,,GTT -> GTC,525,SNP (transition),None,WP_151141940.1,85.3%,0.0
T,983017,983017,1,1,,C -> T,2448,retention module-containing protein CDS,,AGC -> AGT,1591,SNP (transition),None,WP_151140951.1,27.3%,0.0
G,2324006,2324006,1,1,,A -> G,2448,CheR family methyltransferase CDS,,TTT -> TTC,515,SNP (transition),None,WP_151141940.1,84.7%,0.0
TT,2324003,2324004,2,1,G -> E,GC -> TT,2450,CheR family methyltransferase CDS,,GGC -> GAA,518 -> 522,Substitution,Substitution,WP_151141940.1,81.9% -> 82.4%,0.0
T,983020,983020,1,1,,C -> T,2451,retention module-containing protein CDS,,TTC -> TTT,1598,SNP (transition),None,WP_151140951.1,27.2%,0.0
G,983023,983023,1,1,,C -> G,2454,retention module-containing protein CDS,,ACC -> ACG,1603,SNP (transversion),None,WP_151140951.1,35.4%,0.0
T,983031,983031,1,1,A -> V,C -> T,2462,retention module-containing protein CDS,,GCC -> GTC,1621,SNP (transition),Substitution,WP_151140951.1,35.1%,0.0
CC,983034,983035,2,1,K -> T,AA -> CC,2465,retention module-containing protein CDS,,AAA -> ACC,1633 -> 1637,Substitution,Substitution,WP_151140951.1,63.9% -> 64.1%,0.0
C,983038,983038,1,1,,T -> C,2469,retention module-containing protein CDS,,GAT -> GAC,1654,SNP (transition),None,WP_151140951.1,64.3%,0.0
AG,983039,983040,2,1,A -> S,GC -> AG,2470,retention module-containing protein CDS,,GCC -> AGC,1664 -> 1670,Substitution,Substitution,WP_151140951.1,34.9%,0.0
T,983043,983043,1,1,Q -> L,A -> T,2474,retention module-containing protein CDS,,CAG -> CTG,1663,SNP (transversion),Substitution,WP_151140951.1,29.0%,0.0
CA,983050,983051,2,1,NV -> NI,TG -> CA,2481,retention module-containing protein CDS,,"AAT,GTC -> AAC,ATC",1640 -> 1642,Substitution,Substitution,WP_151140951.1,29.0% -> 29.1%,0.0
T,983053,983053,1,1,,C -> T,2484,retention module-containing protein CDS,,GTC -> GTT,1643,SNP (transition),None,WP_151140951.1,35.1%,0.0
G,983056,983056,1,1,,C -> G,2487,retention module-containing protein CDS,,GCC -> GCG,1646,SNP (transversion),None,WP_151140951.1,35.1%,0.0
G,983072,983072,1,1,I -> V,A -> G,2503,retention module-containing protein CDS,,ATC -> GTC,1683,SNP (transition),Substitution,WP_151140951.1,29.5%,0.0
T,983077,983077,1,1,,C -> T,2508,retention module-containing protein CDS,,AAC -> AAT,1664,SNP (transition),None,WP_151140951.1,34.1%,0.0
G,983090,983090,1,1,M -> V,A -> G,2521,retention module-containing protein CDS,,ATG -> GTG,1646,SNP (transition),Substitution,WP_151140951.1,34.6%,0.0
GTA,983090,983092,2,2,M -> V,ATG -> GTA,2521,retention module-containing protein CDS,,ATG -> GTA,1635 -> 1646,Substitution,Substitution,WP_151140951.1,28.9% -> 29.1%,0.0
G,983095,983095,1,1,,C -> G,2526,retention module-containing protein CDS,,CCC -> CCG,1647,SNP (transversion),None,WP_151140951.1,63.8%,0.0
T,983097,983097,1,1,T -> I,C -> T,2528,retention module-containing protein CDS,,ACC -> ATC,1652,SNP (transition),Substitution,WP_151140951.1,33.5%,0.0
T,983103,983103,1,1,N -> I,A -> T,2534,retention module-containing protein CDS,,AAC -> ATC,1636,SNP (transversion),Substitution,WP_151140951.1,30.0%,0.0
CT,983103,983104,2,1,N -> T,AC -> CT,2534,retention module-containing protein CDS,,AAC -> ACT,1634 -> 1636,Substitution,Substitution,WP_151140951.1,32.9% -> 33.0%,0.0
CC,983105,983106,2,1,I -> P,AT -> CC,2536,retention module-containing protein CDS,,ATC -> CCC,1614 -> 1620,Substitution,Substitution,WP_151140951.1,33.5% -> 33.6%,0.0
GC,983105,983106,2,1,I -> A,AT -> GC,2536,retention module-containing protein CDS,,ATC -> GCC,1614 -> 1620,Substitution,Substitution,WP_151140951.1,29.6% -> 29.8%,0.0
T,983110,983110,1,1,,C -> T,2541,retention module-containing protein CDS,,GAC -> GAT,1639,SNP (transition),None,WP_151140951.1,63.7%,0.0
GC,983111,983112,2,1,H -> A,CA -> GC,2542,retention module-containing protein CDS,,CAC -> GCC,1628 -> 1630,Substitution,Substitution,WP_151140951.1,31.2% -> 31.4%,0.0
ATAG,983111,983114,4,1,HT -> IA,CACA -> ATAG,2542,retention module-containing protein CDS,,"CAC,ACC -> ATA,GCC",1628 -> 1648,Substitution,Substitution,WP_151140951.1,31.1% -> 31.8%,0.0
A,983136,983136,1,1,S -> Y,C -> A,2567,retention module-containing protein CDS,,TCC -> TAC,1692,SNP (transversion),Substitution,WP_151140951.1,64.4%,0.0
A,2343766,2343766,1,1,,G -> A,2571,CheR family methyltransferase CDS,,TTC -> TTT,398,SNP (transition),None,WP_151141950.1,63.3%,3.7E-147
T,983153,983153,1,1,,C -> T,2584,retention module-containing protein CDS,,CTG -> TTG,1700,SNP (transition),None,WP_151140951.1,29.8%,0.0
A,2343748,2343748,1,1,,C -> A,2589,CheR family methyltransferase CDS,,CGG -> CGT,405,SNP (transversion),None,WP_151141950.1,57.8%,3.9E-124
C,983165,983165,1,1,N -> H,A -> C,2596,retention module-containing protein CDS,,AAC -> CAC,1679,SNP (transversion),Substitution,WP_151140951.1,64.0%,0.0
TA,983169,983170,2,1,A -> V,CG -> TA,2600,retention module-containing protein CDS,,GCG -> GTA,1674 -> 1678,Substitution,Substitution,WP_151140951.1,63.5% -> 63.7%,0.0
A,983173,983173,1,1,,G -> A,2604,retention module-containing protein CDS,,GGG -> GGA,1673,SNP (transition),None,WP_151140951.1,63.1%,0.0
A,2343733,2343733,1,1,,G -> A,2604,CheR family methyltransferase CDS,,GAC -> GAT,415,SNP (transition),None,WP_151141950.1,55.9%,6.6E-98
A,2343729,2343729,1,1,,G -> A,2608,CheR family methyltransferase CDS,,CTG -> TTG,408,SNP (transition),None,WP_151141950.1,56.6%,4.7E-99
T,983179,983179,1,1,,C -> T,2610,retention module-containing protein CDS,,GAC -> GAT,1667,SNP (transition),None,WP_151140951.1,63.2%,0.0
T,983182,983182,1,1,,C -> T,2613,retention module-containing protein CDS,,GGC -> GGT,1647,SNP (transition),None,WP_151140951.1,62.8%,0.0
A,2343723,2343723,1,1,,G -> A,2614,CheR family methyltransferase CDS,,CTG -> TTG,400,SNP (transition),None,WP_151141950.1,56.5%,5.9E-77
TT,2343719,2343720,2,1,G -> N,CC -> TT,2617,CheR family methyltransferase CDS,,GGT -> AAT,400,Substitution,Substitution,WP_151141950.1,56.3%,4.1E-76
GTT,2343715,2343717,2,2,E -> N,CTC -> GTT,2620,CheR family methyltransferase CDS,,GAG -> AAC,407 -> 409,Substitution,Substitution,WP_151141950.1,55.0% -> 55.7%,2.4E-73
C,2343712,2343712,1,1,,T -> C,2625,CheR family methyltransferase CDS,,GAA -> GAG,402,SNP (transition),None,WP_151141950.1,55.7%,1.0E-74
T,983197,983197,1,1,,C -> T,2628,retention module-containing protein CDS,,GGC -> GGT,1657,SNP (transition),None,WP_151140951.1,33.4%,0.0
G,2343703,2343703,1,1,,A -> G,2634,CheR family methyltransferase CDS,,CGT -> CGC,403,SNP (transition),None,WP_151141950.1,55.6%,1.9E-74
A,2343697,2343697,1,1,,C -> A,2640,CheR family methyltransferase CDS,,GTG -> GTT,408,SNP (transversion),None,WP_151141950.1,52.2%,2.1E-64
CG,2343693,2343694,2,1,AQ -> AE,GC -> CG,2643,CheR family methyltransferase CDS,,"GCG,CAA -> GCC,GAA",399 -> 405,Substitution,Substitution,WP_151141950.1,51.4% -> 52.4%,8.4E-45
A,983218,983218,1,1,,C -> A,2649,retention module-containing protein CDS,,GCC -> GCA,1563,SNP (transversion),None,WP_151140951.1,31.2%,0.0
GG,983223,983224,2,1,D -> G,AC -> GG,2654,retention module-containing protein CDS,,GAC -> GGG,1537 -> 1545,Substitution,Substitution,WP_151140951.1,29.2% -> 29.4%,0.0
T,983224,983224,1,1,,C -> T,2655,retention module-containing protein CDS,,GAC -> GAT,1537,SNP (transition),None,WP_151140951.1,37.2%,0.0
A,2343679,2343679,1,1,,G -> A,2658,CheR family methyltransferase CDS,,GAC -> GAT,406,SNP (transition),None,WP_151141950.1,51.7%,1.8E-30
C,983230,983230,1,1,,T -> C,2661,retention module-containing protein CDS,,ACT -> ACC,1517,SNP (transition),None,WP_151140951.1,28.4%,0.0
A,2343676,2343676,1,1,,G -> A,2661,CheR family methyltransferase CDS,,TTC -> TTT,406,SNP (transition),None,WP_151141950.1,51.7%,1.8E-30
G,983242,983242,1,1,,A -> G,2673,retention module-containing protein CDS,,GTA -> GTG,1454,SNP (transition),None,WP_151140951.1,26.8%,0.0
G,2343649,2343649,1,1,,A -> G,2688,CheR family methyltransferase CDS,,GGT -> GGC,421,SNP (transition),None,WP_151141950.1,49.2%,2.5E-26
T,983268,983268,1,1,N -> I,A -> T,2699,retention module-containing protein CDS,,AAC -> ATC,1367,SNP (transversion),Substitution,WP_151140951.1,42.6%,0.0
A,983273,983273,1,1,A -> T,G -> A,2704,retention module-containing protein CDS,,GCC -> ACC,1357,SNP (transition),Substitution,WP_151140951.1,67.9%,0.0
G,983299,983299,1,1,,C -> G,2730,retention module-containing protein CDS,,GCC -> GCG,1338,SNP (transversion),None,WP_151140951.1,41.5%,0.0
C,983308,983308,1,1,,T -> C,2739,retention module-containing protein CDS,,AAT -> AAC,1319,SNP (transition),None,WP_151140951.1,64.1%,0.0
G,983312,983312,1,1,L -> V,C -> G,2743,retention module-containing protein CDS,,CTG -> GTG,1324,SNP (transversion),Substitution,WP_151140951.1,58.0%,0.0
C,868901,868901,1,1,,G -> C,2751,ImcF-related family protein CDS,,GGG -> GGC,408,SNP (transversion),None,WP_151140895.1,42.9%,4.0E-52
T,868907,868907,1,1,,C -> T,2757,ImcF-related family protein CDS,,CTC -> CTT,407,SNP (transition),None,WP_151140895.1,66.1%,1.7E-90
AT,2343577,2343578,2,1,C -> Y,GC -> AT,2759,CheR family methyltransferase CDS,,TGC -> TAT,449 -> 452,Substitution,Substitution,WP_151141950.1,50.0% -> 50.1%,1.8E-16
G,2343574,2343574,1,1,,A -> G,2763,CheR family methyltransferase CDS,,TAT -> TAC,454,SNP (transition),None,WP_151141950.1,49.8%,7.4E-16
G,983338,983338,1,1,,C -> G,2769,retention module-containing protein CDS,,GTC -> GTG,1303,SNP (transversion),None,WP_151140951.1,62.0%,0.0
A,3460529,3460529,1,1,,G -> A,2781,ImcF-related family protein CDS,,CTC -> CTT,390,SNP (transition),None,WP_191994403.1,66.7%,8.9E-27
T,983371,983371,1,1,,C -> T,2802,retention module-containing protein CDS,,TAC -> TAT,1290,SNP (transition),None,WP_151140951.1,41.9%,0.0
CC,983385,983386,2,1,G -> A,GT -> CC,2816,retention module-containing protein CDS,,GGT -> GCC,1309,Substitution,Substitution,WP_151140951.1,61.0%,0.0
G,868967,868967,1,1,,A -> G,2817,ImcF-related family protein CDS,,GTA -> GTG,334,SNP (transition),None,WP_151140895.1,50.0%,3.3E-91
ATC,983411,983413,2,2,V -> I,GTG -> ATC,2842,retention module-containing protein CDS,,GTG -> ATC,1115 -> 1121,Substitution,Substitution,WP_151140951.1,38.3% -> 38.7%,0.0
G,1459138,1459137,0,1,,(G)3 -> (G)4,2845,molybdopterin cofactor-binding domain-containingprotein CDS,,,537,Insertion (tandem repeat),Frame Shift,,100.0%,7.9E-162
G,983416,983416,1,1,,C -> G,2847,retention module-containing protein CDS,,ACC -> ACG,1092,SNP (transversion),None,WP_151140951.1,38.5%,0.0
T,983434,983434,1,1,,C -> T,2865,retention module-containing protein CDS,,AGC -> AGT,956,SNP (transition),None,WP_151140951.1,37.0%,0.0
T,983435,983435,1,1,S -> C,A -> T,2866,retention module-containing protein CDS,,AGC -> TGC,953,SNP (transversion),Substitution,WP_151140951.1,46.3%,0.0
TTT,983438,983440,2,2,L -> F,CTC -> TTT,2869,retention module-containing protein CDS,,CTC -> TTT,906 -> 923,Substitution,Substitution,WP_151140951.1,36.0% -> 36.6%,0.0
G,983444,983444,1,1,P -> A,C -> G,2875,retention module-containing protein CDS,,CCG -> GCG,876,SNP (transversion),Substitution,WP_151140951.1,42.5%,0.0
A,983447,983447,1,1,S -> T,T -> A,2878,retention module-containing protein CDS,,TCC -> ACC,854,SNP (transversion),Substitution,WP_151140951.1,35.2%,0.0
A,983450,983450,1,1,C -> S,T -> A,2881,retention module-containing protein CDS,,TGC -> AGC,836,SNP (transversion),Substitution,WP_151140951.1,40.4%,0.0
CA,983456,983457,2,1,S -> H,AG -> CA,2887,retention module-containing protein CDS,,AGC -> CAC,815 -> 821,Substitution,Substitution,WP_151140951.1,38.7% -> 39.0%,0.0
AA,983475,983476,2,1,A -> E,CC -> AA,2906,retention module-containing protein CDS,,GCC -> GAA,714 -> 717,Substitution,Substitution,WP_151140951.1,31.5% -> 31.7%,0.0
G,983480,983480,1,1,T -> A,A -> G,2911,retention module-containing protein CDS,,ACC -> GCC,703,SNP (transition),Substitution,WP_151140951.1,30.7%,0.0
C,869066,869066,1,1,,A -> C,2916,ImcF-related family protein CDS,,GGA -> GGC,344,SNP (transversion),None,WP_151140895.1,75.6%,0.0
T,1459250,1459249,0,1,,(T)2 -> (T)3,2957,molybdopterin cofactor-binding domain-containingprotein CDS,,,450,Insertion (tandem repeat),Frame Shift,,99.8%,6.8E-178
G,2343235,2343235,1,1,,C -> G,3102,CheR family methyltransferase CDS,,CTG -> CTC,470,SNP (transversion),None,WP_151141950.1,54.9%,2.9E-11
A,2343127,2343127,1,1,,G -> A,3210,CheR family methyltransferase CDS,,GAC -> GAT,536,SNP (transition),None,WP_151141950.1,55.6%,2.2E-30
C,2343115,2343115,1,1,,T -> C,3222,CheR family methyltransferase CDS,,GTA -> GTG,520,SNP (transition),None,WP_151141950.1,55.6%,2.4E-49
C,2343088,2343088,1,1,,T -> C,3249,CheR family methyltransferase CDS,,AAA -> AAG,500,SNP (transition),None,WP_151141950.1,60.2%,1.1E-61
C,2343082,2343082,1,1,,T -> C,3255,CheR family methyltransferase CDS,,GCA -> GCG,498,SNP (transition),None,WP_151141950.1,61.8%,6.0E-67
G,2343067,2343067,1,1,,T -> G,3270,CheR family methyltransferase CDS,,CGA -> CGC,487,SNP (transversion),None,WP_151141950.1,65.5%,2.3E-105
T,2343043,2343043,1,1,,C -> T,3294,CheR family methyltransferase CDS,,GTG -> GTA,488,SNP (transition),None,WP_151141950.1,67.6%,1.7E-144
C,256875,256875,1,1,,T -> C,,,,,112,SNP (transition),,,97.3%,0.0
G,605362,605362,1,1,,T -> G,,,,,405,SNP (transversion),,,36.5%,0.0
CG,605364,605363,0,1,,+CG,,,,,396,Insertion,,,32.1%,0.0
,605367,605367,1,1,,-A,,,,,395,Deletion,,,30.9%,1.5E-213
G,605377,605377,1,1,,A -> G,,,,,376,SNP (transition),,,28.5%,4.4E-279
AT,605379,605380,2,1,,TA -> AT,,,,,368 -> 373,Substitution,,,26.8% -> 26.9%,1.0E-230
T,605384,605384,1,1,,G -> T,,,,,372,SNP (transversion),,,26.1%,1.4E-258
C,951692,951692,1,1,,A -> C,,,,,314,SNP (transversion),,,39.2%,1.8E-133
T,951724,951724,1,1,,G -> T,,,,,377,SNP (transversion),,,32.9%,2.8E-54
G,951735,951735,1,1,,A -> G,,,,,384,SNP (transition),,,33.6%,1.1E-80
C,951736,951736,1,1,,T -> C,,,,,385,SNP (transition),,,94.0%,0.0
A,951743,951743,1,1,,G -> A,,,,,384,SNP (transition),,,84.9%,0.0
,951920,951920,1,1,,-T,,,,,231,Deletion,,,33.3%,7.8E-131
A,952114,952114,1,1,,G -> A,,,,,36,SNP (transition),,,27.8%,2.1E-13
C,952175,952175,1,1,,A -> C,,,,,306,SNP (transversion),,,25.8%,2.5E-155
G,952194,952194,1,1,,T -> G,,,,,325,SNP (transversion),,,59.7%,1.8E-295
A,952204,952204,1,1,,G -> A,,,,,333,SNP (transition),,,52.9%,3.2E-272
C,952222,952222,1,1,,A -> C,,,,,371,SNP (transversion),,,36.9%,1.4E-211
G,952251,952251,1,1,,T -> G,,,,,402,SNP (transversion),,,35.6%,5.3E-55
G,952288,952288,1,1,,A -> G,,,,,196,SNP (transition),,,37.2%,5.4E-78
C,952292,952292,1,1,,T -> C,,,,,175,SNP (transition),,,28.6%,5.7E-57
C,952385,952385,1,1,,A -> C,,,,,233,SNP (transversion),,,36.5%,2.3E-49
T,952450,952450,1,1,,C -> T,,,,,498,SNP (transition),,,53.6%,0.0
G,952451,952451,1,1,,C -> G,,,,,498,SNP (transversion),,,45.0%,0.0
G,952514,952514,1,1,,A -> G,,,,,1059,SNP (transition),,,63.4%,0.0
C,952547,952547,1,1,,T -> C,,,,,1185,SNP (transition),,,31.6%,0.0
C,952558,952558,1,1,,T -> C,,,,,1170,SNP (transition),,,45.7%,0.0
A,952566,952566,1,1,,G -> A,,,,,1141,SNP (transition),,,35.6%,0.0
C,952656,952656,1,1,,T -> C,,,,,484,SNP (transition),,,99.8%,0.0
T,952663,952663,1,1,,G -> T,,,,,421,SNP (transversion),,,45.6%,0.0
G,952672,952672,1,1,,A -> G,,,,,341,SNP (transition),,,88.6%,0.0
A,952673,952673,1,1,,G -> A,,,,,336,SNP (transition),,,54.5%,5.9E-214
C,952691,952691,1,1,,A -> C,,,,,229,SNP (transversion),,,41.0%,8.6E-105
A,952707,952707,1,1,,C -> A,,,,,137,SNP (transversion),,,84.7%,4.3E-162
C,952719,952719,1,1,,G -> C,,,,,92,SNP (transversion),,,31.5%,2.6E-32
T,952720,952720,1,1,,G -> T,,,,,85,SNP (transversion),,,48.2%,2.7E-46
A,952729,952729,1,1,,G -> A,,,,,47,SNP (transition),,,27.7%,2.5E-8
TC,952730,952731,2,1,,GA -> TC,,,,,41 -> 43,Substitution,,,88.4% -> 90.2%,2.0E-73
G,952755,952755,1,1,,T -> G,,,,,59,SNP (transversion),,,93.2%,1.4E-132
A,952800,952800,1,1,,C -> A,,,,,102,SNP (transversion),,,100.0%,6.3E-317
A,952802,952802,1,1,,G -> A,,,,,102,SNP (transition),,,98.0%,5.1E-287
C,1135446,1135446,1,1,,T -> C,,,,,356,SNP (transition),,,31.5%,7.5E-153
T,1137808,1137808,1,1,,C -> T,,,,,311,SNP (transition),,,31.2%,5.8E-190
T,1137809,1137809,1,1,,G -> T,,,,,321,SNP (transversion),,,25.5%,6.7E-169
TTCC,1137816,1137819,4,1,,GAAA -> TTCC,,,,,360 -> 374,Substitution,,,25.0% -> 25.7%,9.1E-187
G,1137823,1137823,1,1,,T -> G,,,,,410,SNP (transversion),,,26.8%,1.1E-217
C,1137826,1137826,1,1,,G -> C,,,,,418,SNP (transversion),,,27.3%,3.2E-249
T,1137831,1137831,1,1,,C -> T,,,,,427,SNP (transition),,,52.0%,0.0
A,1137837,1137837,1,1,,G -> A,,,,,421,SNP (transition),,,54.6%,0.0
G,1137852,1137852,1,1,,A -> G,,,,,425,SNP (transition),,,57.2%,0.0
G,1137854,1137854,1,1,,C -> G,,,,,430,SNP (transversion),,,51.6%,0.0
,1137901,1137903,3,1,,-CAA,,,,,403 -> 404,Deletion,,,56.2% -> 56.3%,5.0E-292
CC,1137911,1137912,2,1,,TG -> CC,,,,,395 -> 396,Substitution,,,57.6% -> 57.7%,0.0
C,1137922,1137922,1,1,,T -> C,,,,,369,SNP (transition),,,54.7%,0.0
A,1137926,1137926,1,1,,C -> A,,,,,354,SNP (transversion),,,54.0%,0.0
T,1137939,1137939,1,1,,C -> T,,,,,326,SNP (transition),,,52.5%,0.0
GG,1137947,1137948,2,1,,AC -> GG,,,,,283 -> 286,Substitution,,,45.1% -> 45.2%,0.0
G,1137950,1137950,1,1,,T -> G,,,,,275,SNP (transversion),,,42.9%,0.0
AAG,1137952,1137954,3,1,,GTC -> AAG,,,,,239 -> 252,Substitution,,,37.7% -> 39.7%,1.4E-247
A,1137956,1137956,1,1,,C -> A,,,,,222,SNP (transversion),,,35.1%,1.7E-212
A,1137958,1137958,1,1,,G -> A,,,,,212,SNP (transition),,,33.5%,8.9E-192
A,1137962,1137962,1,1,,G -> A,,,,,189,SNP (transition),,,27.0%,1.4E-132
G,1167285,1167285,1,1,,T -> G,,,,,374,SNP (transversion),,,28.3%,6.3E-234
C,1167288,1167288,1,1,,G -> C,,,,,365,SNP (transversion),,,30.1%,3.9E-246
TTCC,1167294,1167297,4,1,,GAAA -> TTCC,,,,,358 -> 366,Substitution,,,25.7% -> 26.1%,4.4E-234
CT,1185455,1185456,2,1,,GC -> CT,,,,,306 -> 311,Substitution,,,62.1%,1.7E-275
CACC,1294882,1294885,4,1,,GCAT -> CACC,,,,,90 -> 93,Substitution,,,25.6% -> 30.0%,4.9E-60
GG,1295018,1295019,2,1,,AA -> GG,,,,,335 -> 342,Substitution,,,25.1% -> 26.0%,9.8E-206
A,1295021,1295021,1,1,,C -> A,,,,,368,SNP (transversion),,,43.5%,0.0
G,1295022,1295022,1,1,,C -> G,,,,,382,SNP (transversion),,,34.8%,0.0
TG,1295024,1295025,2,1,,CA -> TG,,,,,401 -> 411,Substitution,,,34.7% -> 36.0%,0.0
G,1295055,1295055,1,1,,A -> G,,,,,589,SNP (transition),,,30.1%,0.0
T,1295058,1295058,1,1,,C -> T,,,,,604,SNP (transition),,,31.0%,0.0
T,1295081,1295081,1,1,,G -> T,,,,,707,SNP (transversion),,,36.4%,0.0
A,1295125,1295125,1,1,,G -> A,,,,,617,SNP (transition),,,27.6%,0.0
C,1295128,1295128,1,1,,T -> C,,,,,602,SNP (transition),,,26.2%,0.0
A,1295143,1295143,1,1,,T -> A,,,,,474,SNP (transversion),,,63.3%,0.0
T,1295151,1295151,1,1,,G -> T,,,,,397,SNP (transversion),,,26.7%,1.8E-262
C,1295157,1295157,1,1,,G -> C,,,,,375,SNP (transversion),,,48.8%,0.0
G,1295159,1295159,1,1,,A -> G,,,,,365,SNP (transition),,,46.6%,0.0
G,1295165,1295165,1,1,,T -> G,,,,,337,SNP (transversion),,,41.5%,0.0
C,1295176,1295176,1,1,,G -> C,,,,,287,SNP (transversion),,,31.4%,1.5E-221
G,1295178,1295178,1,1,,T -> G,,,,,273,SNP (transversion),,,28.9%,2.6E-199
AA,1321019,1321020,2,1,,GC -> AA,,,,,742 -> 744,Substitution,,,26.5% -> 26.6%,0.0
C,1352983,1352983,1,1,,G -> C,,,,,81,SNP (transversion),,,33.3%,1.1E-57
C,1375281,1375281,1,1,,T -> C,,,,,190,SNP (transition),,,26.3%,1.4E-74
G,1375291,1375291,1,1,,C -> G,,,,,193,SNP (transversion),,,28.5%,4.5E-84
C,1375299,1375299,1,1,,A -> C,,,,,187,SNP (transversion),,,36.9%,2.8E-114
C,1375300,1375300,1,1,,T -> C,,,,,186,SNP (transition),,,30.6%,8.1E-95
T,1375301,1375301,1,1,,G -> T,,,,,184,SNP (transversion),,,36.4%,3.0E-97
A,1375305,1375305,1,1,,G -> A,,,,,184,SNP (transition),,,30.4%,2.0E-87
CC,1375307,1375308,2,1,,AG -> CC,,,,,180 -> 181,Substitution,,,30.9% -> 31.1%,5.7E-100
A,1375327,1375327,1,1,,T -> A,,,,,197,SNP (transversion),,,30.5%,1.0E-81
C,1375331,1375331,1,1,,T -> C,,,,,202,SNP (transition),,,34.2%,1.3E-104
G,1375366,1375366,1,1,,A -> G,,,,,222,SNP (transition),,,27.0%,5.8E-90
A,1375371,1375371,1,1,,G -> A,,,,,231,SNP (transition),,,25.1%,3.5E-79
G,1375391,1375391,1,1,,C -> G,,,,,258,SNP (transversion),,,26.0%,6.3E-99
C,1456214,1456213,0,1,,(C)3 -> (C)4,,,,,491,Insertion (tandem repeat),,,99.4%,0.0
G,1460768,1460767,0,1,,+G,,,,,525,Insertion,,,98.3%,0.0
C,1462221,1462220,0,1,,+C,,,,,496,Insertion,,,99.8%,0.0
T,1473325,1473325,1,1,,G -> T,,,,,554,SNP (transversion),,,29.1%,2.7E-228
C,1478016,1478016,1,1,,T -> C,,,,,131,SNP (transition),,,41.2%,2.2E-45
G,1478024,1478024,1,1,,A -> G,,,,,159,SNP (transition),,,28.9%,1.1E-18
G,1478030,1478030,1,1,,A -> G,,,,,159,SNP (transition),,,84.3%,1.7E-226
A,1478035,1478035,1,1,,G -> A,,,,,162,SNP (transition),,,27.8%,1.5E-17
C,1478045,1478045,1,1,,T -> C,,,,,183,SNP (transition),,,84.2%,8.5E-214
GG,1478065,1478066,2,1,,AA -> GG,,,,,202 -> 205,Substitution,,,47.0% -> 47.3%,2.1E-105
C,1478096,1478096,1,1,,T -> C,,,,,237,SNP (transition),,,29.5%,8.4E-47
A,1478106,1478106,1,1,,G -> A,,,,,251,SNP (transition),,,29.1%,3.5E-12
A,1478132,1478132,1,1,,G -> A,,,,,255,SNP (transition),,,27.5%,4.8E-26
T,1478132,1478132,1,1,,G -> T,,,,,255,SNP (transversion),,,45.9%,4.8E-103
T,1478134,1478134,1,1,,C -> T,,,,,253,SNP (transition),,,26.5%,2.1E-9
G,1478172,1478172,1,1,,A -> G,,,,,194,SNP (transition),,,52.6%,6.0E-98
T,1478237,1478237,1,1,,A -> T,,,,,127,SNP (transversion),,,33.1%,5.3E-31
T,1478254,1478254,1,1,,G -> T,,,,,105,SNP (transversion),,,58.1%,6.7E-69
T,1478314,1478314,1,1,,C -> T,,,,,197,SNP (transition),,,25.9%,1.2E-75
C,1478397,1478397,1,1,,A -> C,,,,,269,SNP (transversion),,,30.5%,3.0E-176
A,1478480,1478480,1,1,,G -> A,,,,,779,SNP (transition),,,32.7%,0.0
T,1478535,1478535,1,1,,C -> T,,,,,777,SNP (transition),,,34.7%,0.0
A,1478608,1478608,1,1,,G -> A,,,,,414,SNP (transition),,,38.6%,1.3E-110
A,1478655,1478655,1,1,,T -> A,,,,,272,SNP (transversion),,,37.5%,4.9E-51
A,1478673,1478673,1,1,,T -> A,,,,,229,SNP (transversion),,,40.6%,1.0E-58
TTG,1501494,1501496,3,1,,CAC -> TTG,,,,,34 -> 39,Substitution,,,29.4% -> 41.0%,1.3E-29
CGTAA,1501498,1501502,5,1,,GCCCC -> CGTAA,,,,,40 -> 43,Substitution,,,47.5% -> 57.1%,4.1E-56
GGGA,1501504,1501507,4,1,,TCCC -> GGGA,,,,,43 -> 44,Substitution,,,63.6% -> 70.5%,6.6E-90
T,1501509,1501509,1,1,,C -> T,,,,,48,SNP (transition),,,77.1%,8.9E-109
A,1501512,1501512,1,1,,T -> A,,,,,48,SNP (transversion),,,87.5%,1.9E-136
AACGATGGCAC,1501517,1501527,11,1,,GCGAGCATGCT -> AACGATGGCAC,,,,,62 -> 88,Substitution,,,87.1% -> 96.6%,5.5E-188
G,1501530,1501530,1,1,,C -> G,,,,,94,SNP (transversion),,,98.9%,0.0
GGT,1501532,1501534,3,1,,ATG -> GGT,,,,,95 -> 96,Substitution,,,97.9%,0.0
,1516008,1516008,1,1,,(C)10 -> (C)9,,,,,281,Deletion (tandem repeat),,,98.9%,0.0
G,1676172,1676172,1,1,,A -> G,,,,,283,SNP (transition),,,25.8%,4.2E-129
A,1676173,1676173,1,1,,G -> A,,,,,283,SNP (transition),,,36.4%,1.9E-189
A,1676197,1676197,1,1,,G -> A,,,,,273,SNP (transition),,,45.4%,6.4E-243
C,1676229,1676229,1,1,,T -> C,,,,,260,SNP (transition),,,26.9%,2.1E-118
C,1676230,1676230,1,1,,T -> C,,,,,259,SNP (transition),,,48.3%,8.1E-237
G,1676235,1676235,1,1,,A -> G,,,,,256,SNP (transition),,,28.1%,1.7E-130
T,1676249,1676249,1,1,,C -> T,,,,,240,SNP (transition),,,59.6%,7.2E-318
A,1676258,1676258,1,1,,G -> A,,,,,212,SNP (transition),,,57.1%,8.7E-254
T,1676277,1676277,1,1,,G -> T,,,,,145,SNP (transversion),,,57.2%,3.5E-125
A,1676302,1676302,1,1,,T -> A,,,,,116,SNP (transversion),,,54.3%,1.1E-74
T,1676320,1676320,1,1,,A -> T,,,,,115,SNP (transversion),,,47.0%,3.6E-49
A,1676349,1676349,1,1,,C -> A,,,,,159,SNP (transversion),,,95.6%,1.6E-156
A,1676356,1676356,1,1,,G -> A,,,,,179,SNP (transition),,,30.2%,3.0E-27
C,1676397,1676397,1,1,,A -> C,,,,,413,SNP (transversion),,,32.7%,5.8E-160
G,1676426,1676426,1,1,,T -> G,,,,,490,SNP (transversion),,,31.4%,4.0E-255
T,1676436,1676436,1,1,,C -> T,,,,,505,SNP (transition),,,27.7%,3.7E-223
T,1676444,1676444,1,1,,C -> T,,,,,510,SNP (transition),,,39.6%,1.0E-278
T,1676445,1676445,1,1,,C -> T,,,,,511,SNP (transition),,,30.1%,6.0E-191
,1676490,1676490,1,1,,(T)3 -> (T)2,,,,,489,Deletion (tandem repeat),,,28.0%,3.2E-99
,1676495,1676496,2,1,,-GG,,,,,461 -> 468,Deletion,,,25.6% -> 26.0%,8.6E-105
A,1676499,1676499,1,1,,T -> A,,,,,439,SNP (transversion),,,27.8%,7.3E-195
,1676502,1676502,1,1,,-C,,,,,432,Deletion,,,27.8%,2.2E-109
C,1676506,1676506,1,1,,A -> C,,,,,415,SNP (transversion),,,29.6%,1.1E-212
,1676508,1676508,1,1,,-T,,,,,414,Deletion,,,30.0%,1.2E-105
G,1676578,1676578,1,1,,A -> G,,,,,314,SNP (transition),,,63.1%,4.5E-289
G,1676598,1676598,1,1,,A -> G,,,,,294,SNP (transition),,,27.2%,9.8E-73
C,1676655,1676655,1,1,,T -> C,,,,,245,SNP (transition),,,33.5%,1.5E-147
A,1676659,1676659,1,1,,G -> A,,,,,243,SNP (transition),,,29.6%,3.1E-125
G,1676837,1676837,1,1,,A -> G,,,,,188,SNP (transition),,,36.7%,3.1E-107
,1676842,1676842,1,1,,-T,,,,,193,Deletion,,,34.2%,1.0E-42
TCT,1677130,1677132,3,1,,GGG -> TCT,,,,,316 -> 319,Substitution,,,25.0% -> 25.2%,1.5E-39
TG,1677360,1677361,2,1,,CC -> TG,,,,,423 -> 426,Substitution,,,29.3% -> 29.8%,2.3E-220
C,1677430,1677430,1,1,,T -> C,,,,,468,SNP (transition),,,33.1%,2.8E-169
A,1677435,1677435,1,1,,C -> A,,,,,460,SNP (transversion),,,26.1%,8.9E-106
T,1677457,1677457,1,1,,C -> T,,,,,415,SNP (transition),,,34.2%,1.9E-185
A,1677458,1677458,1,1,,G -> A,,,,,413,SNP (transition),,,25.7%,1.4E-123
T,1677462,1677462,1,1,,C -> T,,,,,401,SNP (transition),,,50.9%,0.0
G,1677476,1677476,1,1,,A -> G,,,,,354,SNP (transition),,,38.7%,1.2E-228
A,1677522,1677522,1,1,,T -> A,,,,,257,SNP (transversion),,,25.3%,1.3E-101
C,1677524,1677524,1,1,,G -> C,,,,,238,SNP (transversion),,,25.2%,8.8E-100
A,1744353,1744353,1,1,,G -> A,,,,,329,SNP (transition),,,28.6%,2.8E-189
G,1744424,1744424,1,1,,A -> G,,,,,415,SNP (transition),,,33.3%,1.3E-301
C,1744435,1744435,1,1,,G -> C,,,,,388,SNP (transversion),,,25.5%,3.1E-223
G,1744490,1744490,1,1,,A -> G,,,,,327,SNP (transition),,,39.4%,2.7E-255
T,1744525,1744525,1,1,,C -> T,,,,,341,SNP (transition),,,28.4%,1.1E-108
C,1744632,1744632,1,1,,A -> C,,,,,739,SNP (transversion),,,39.5%,0.0
,1744740,1744740,1,1,,-G,,,,,352,Deletion,,,29.8%,2.5E-161
A,1744750,1744750,1,1,,G -> A,,,,,297,SNP (transition),,,35.0%,3.2E-220
A,1744760,1744760,1,1,,C -> A,,,,,236,SNP (transversion),,,26.3%,7.9E-123
G,1960130,1960130,1,1,,C -> G,,,,,557,SNP (transversion),,,25.3%,2.4E-218
A,1960135,1960135,1,1,,G -> A,,,,,561,SNP (transition),,,25.3%,7.6E-178
CC,1960138,1960138,1,1,,A -> CC,,,,,560 -> 562,Insertion,,,25.1% -> 25.2%,5.7E-218
T,1960140,1960140,1,1,,G -> T,,,,,564,SNP (transversion),,,25.2%,1.9E-191
G,1960144,1960144,1,1,,T -> G,,,,,555,SNP (transversion),,,26.1%,9.3E-227
C,1960149,1960149,1,1,,T -> C,,,,,550,SNP (transition),,,27.3%,9.9E-238
A,1960152,1960152,1,1,,G -> A,,,,,545,SNP (transition),,,27.9%,1.4E-242
CA,1960167,1960168,2,1,,TT -> CA,,,,,577 -> 578,Substitution,,,29.6% -> 30.1%,6.1E-269
T,1960180,1960180,1,1,,G -> T,,,,,639,SNP (transversion),,,31.5%,1.5E-312
A,2084122,2084122,1,1,,C -> A,,,,,630,SNP (transversion),,,30.6%,0.0
C,2084130,2084130,1,1,,T -> C,,,,,669,SNP (transition),,,32.6%,0.0
C,2084145,2084145,1,1,,G -> C,,,,,709,SNP (transversion),,,35.1%,0.0
G,2084188,2084188,1,1,,T -> G,,,,,654,SNP (transversion),,,31.3%,0.0
C,2084199,2084199,1,1,,A -> C,,,,,638,SNP (transversion),,,28.7%,0.0
G,2084201,2084201,1,1,,A -> G,,,,,646,SNP (transition),,,28.0%,0.0
C,2159792,2159792,1,1,,T -> C,,,,,224,SNP (transition),,,25.9%,4.8E-103
TC,2159899,2159900,2,1,,GT -> TC,,,,,280 -> 281,Substitution,,,26.0% -> 26.1%,1.3E-168
T,2160003,2160003,1,1,,G -> T,,,,,261,SNP (transversion),,,42.5%,1.2E-235
A,2160030,2160030,1,1,,C -> A,,,,,269,SNP (transversion),,,34.2%,4.8E-203
A,2160032,2160032,1,1,,C -> A,,,,,271,SNP (transversion),,,29.9%,2.7E-173
T,2161916,2161916,1,1,,C -> T,,,,,275,SNP (transition),,,25.1%,1.1E-148
C,2161931,2161931,1,1,,G -> C,,,,,290,SNP (transversion),,,36.6%,3.4E-269
C,2161934,2161934,1,1,,T -> C,,,,,287,SNP (transition),,,36.9%,8.7E-270
G,2161984,2161984,1,1,,A -> G,,,,,306,SNP (transition),,,29.4%,1.3E-191
A,2161994,2161994,1,1,,G -> A,,,,,301,SNP (transition),,,25.9%,2.6E-161
G,2200874,2200874,1,1,,A -> G,,,,,242,SNP (transition),,,30.6%,6.7E-189
G,2200877,2200877,1,1,,C -> G,,,,,242,SNP (transversion),,,47.9%,1.0E-323
T,2200890,2200890,1,1,,C -> T,,,,,247,SNP (transition),,,30.8%,1.3E-186
CA,2200891,2200892,2,1,,GG -> CA,,,,,248,Substitution,,,51.6% -> 52.0%,0.0
T,2200926,2200926,1,1,,C -> T,,,,,253,SNP (transition),,,27.3%,1.9E-158
A,2200935,2200935,1,1,,G -> A,,,,,221,SNP (transition),,,31.2%,1.9E-149
,2201305,2201305,1,1,,-C,,,,,143,Deletion,,,27.3%,7.5E-71
,2201310,2201310,1,1,,-T,,,,,147,Deletion,,,42.9%,1.8E-78
C,2201388,2201388,1,1,,T -> C,,,,,217,SNP (transition),,,30.0%,5.6E-146
,2201454,2201454,1,1,,-C,,,,,151,Deletion,,,26.5%,7.4E-22
T,2201455,2201455,1,1,,A -> T,,,,,147,SNP (transversion),,,33.3%,2.6E-69
,2201455,2201455,1,1,,-A,,,,,147,Deletion,,,27.2%,2.5E-22
G,2201462,2201462,1,1,,A -> G,,,,,143,SNP (transition),,,38.5%,4.4E-109
C,2201466,2201466,1,1,,T -> C,,,,,130,SNP (transition),,,43.8%,1.9E-111
A,2201573,2201573,1,1,,G -> A,,,,,183,SNP (transition),,,25.7%,5.2E-65
C,2201607,2201607,1,1,,T -> C,,,,,193,SNP (transition),,,32.6%,3.5E-94
C,2201608,2201608,1,1,,G -> C,,,,,190,SNP (transversion),,,26.8%,1.7E-66
G,2201620,2201620,1,1,,A -> G,,,,,220,SNP (transition),,,28.6%,9.3E-84
T,2201633,2201633,1,1,,C -> T,,,,,259,SNP (transition),,,36.3%,1.4E-135
C,2201664,2201664,1,1,,T -> C,,,,,277,SNP (transition),,,32.9%,1.3E-153
G,2201668,2201668,1,1,,T -> G,,,,,281,SNP (transversion),,,74.0%,0.0
,2201676,2201676,1,1,,(C)5 -> (C)4,,,,,280,Deletion (tandem repeat),,,28.2%,3.1E-73
C,2201687,2201687,1,1,,T -> C,,,,,288,SNP (transition),,,26.0%,2.3E-155
T,2201705,2201705,1,1,,C -> T,,,,,275,SNP (transition),,,66.2%,0.0
T,2201710,2201710,1,1,,C -> T,,,,,267,SNP (transition),,,32.6%,2.8E-78
A,2201711,2201711,1,1,,G -> A,,,,,265,SNP (transition),,,27.5%,3.5E-175
C,2201716,2201716,1,1,,T -> C,,,,,266,SNP (transition),,,36.5%,1.1E-236
G,2201724,2201724,1,1,,A -> G,,,,,263,SNP (transition),,,63.5%,0.0
T,2214846,2214846,1,1,,G -> T,,,,,189,SNP (transversion),,,29.1%,6.0E-134
A,2214852,2214852,1,1,,G -> A,,,,,188,SNP (transition),,,61.7%,7.8E-319
A,2214861,2214861,1,1,,T -> A,,,,,181,SNP (transversion),,,31.5%,4.5E-141
A,2214901,2214901,1,1,,G -> A,,,,,211,SNP (transition),,,41.2%,6.9E-175
A,2214996,2214996,1,1,,T -> A,,,,,142,SNP (transversion),,,31.7%,4.9E-20
T,2215039,2215039,1,1,,G -> T,,,,,173,SNP (transversion),,,27.7%,2.3E-106
A,2215043,2215043,1,1,,C -> A,,,,,170,SNP (transversion),,,34.1%,4.6E-43
A,2215233,2215233,1,1,,G -> A,,,,,217,SNP (transition),,,49.8%,3.8E-153
A,2215239,2215239,1,1,,G -> A,,,,,225,SNP (transition),,,36.0%,1.3E-61
G,2215266,2215266,1,1,,T -> G,,,,,238,SNP (transversion),,,53.4%,3.0E-248
,2215277,2215277,1,1,,(G)5 -> (G)4,,,,,235,Deletion (tandem repeat),,,44.7%,2.9E-101
C,2215281,2215281,1,1,,A -> C,,,,,231,SNP (transversion),,,41.1%,7.6E-153
G,2215285,2215285,1,1,,A -> G,,,,,230,SNP (transition),,,26.1%,9.9E-113
C,2215309,2215309,1,1,,T -> C,,,,,204,SNP (transition),,,25.0%,4.1E-40
C,2215367,2215367,1,1,,G -> C,,,,,246,SNP (transversion),,,45.9%,1.6E-233
G,2215394,2215394,1,1,,C -> G,,,,,189,SNP (transversion),,,30.2%,1.1E-88
T,2215429,2215429,1,1,,A -> T,,,,,136,SNP (transversion),,,59.6%,3.1E-116
G,2215495,2215495,1,1,,T -> G,,,,,29,SNP (transversion),,,72.4%,1.5E-21
G,2215520,2215520,1,1,,T -> G,,,,,72,SNP (transversion),,,65.3%,2.2E-94
A,2215524,2215524,1,1,,C -> A,,,,,74,SNP (transversion),,,55.4%,2.6E-86
GG,2215728,2215729,2,1,,AA -> GG,,,,,305 -> 306,Substitution,,,35.4% -> 35.6%,1.1E-80
A,2215754,2215754,1,1,,G -> A,,,,,285,SNP (transition),,,55.4%,9.5E-156
G,2215786,2215786,1,1,,A -> G,,,,,231,SNP (transition),,,39.0%,4.9E-55
C,2217756,2217756,1,1,,T -> C,,,,,133,SNP (transition),,,27.8%,1.7E-24
TG,2223572,2223573,2,1,,AC -> TG,,,,,353 -> 360,Substitution,,,28.9% -> 29.5%,6.6E-216
T,2223590,2223590,1,1,,A -> T,,,,,307,SNP (transversion),,,27.7%,2.0E-195
G,2223591,2223591,1,1,,A -> G,,,,,318,SNP (transition),,,32.4%,9.9E-245
G,2223602,2223602,1,1,,A -> G,,,,,386,SNP (transition),,,25.1%,1.1E-198
C,2223852,2223852,1,1,,T -> C,,,,,167,SNP (transition),,,25.7%,1.1E-59
A,2224065,2224065,1,1,,T -> A,,,,,250,SNP (transversion),,,58.8%,2.2E-150
GG,2224084,2224084,1,1,,A -> GG,,,,,242 -> 247,Insertion,,,90.7% -> 91.7%,0.0
G,2236519,2236519,1,1,,A -> G,,,,,95,SNP (transition),,,27.4%,1.6E-8
A,2236790,2236790,1,1,,C -> A,,,,,26,SNP (transversion),,,42.3%,1.6E-10
A,2236792,2236792,1,1,,G -> A,,,,,26,SNP (transition),,,26.9%,5.9E-7
C,2236818,2236818,1,1,,G -> C,,,,,35,SNP (transversion),,,65.7%,9.9E-20
C,2236820,2236820,1,1,,T -> C,,,,,41,SNP (transition),,,43.9%,2.1E-8
A,2236832,2236832,1,1,,C -> A,,,,,72,SNP (transversion),,,45.8%,6.5E-7
T,2236832,2236832,1,1,,C -> T,,,,,72,SNP (transition),,,34.7%,1.3E-8
TCT,2236834,2236836,3,1,,GGG -> TCT,,,,,72 -> 73,Substitution,,,39.7% -> 40.3%,1.2E-16
A,2237077,2237077,1,1,,G -> A,,,,,292,SNP (transition),,,34.9%,8.1E-267
T,2237170,2237170,1,1,,C -> T,,,,,465,SNP (transition),,,26.2%,1.5E-288
,2237225,2237228,4,1,,-CAAT,,,,,399 -> 401,Deletion,,,34.9% -> 35.1%,3.4E-212
C,2237263,2237263,1,1,,A -> C,,,,,413,SNP (transversion),,,38.0%,0.0
G,2237281,2237281,1,1,,C -> G,,,,,362,SNP (transversion),,,41.4%,0.0
A,2237331,2237331,1,1,,G -> A,,,,,265,SNP (transition),,,40.4%,4.2E-224
T,2237378,2237378,1,1,,G -> T,,,,,138,SNP (transversion),,,41.3%,6.5E-121
G,2237387,2237387,1,1,,A -> G,,,,,121,SNP (transition),,,26.4%,4.1E-61
CCT,2237389,2237391,3,1,,GAC -> CCT,,,,,98 -> 107,Substitution,,,29.9% -> 32.7%,4.7E-64
A,2237400,2237400,1,1,,C -> A,,,,,65,SNP (transversion),,,30.8%,1.4E-20
G,2237401,2237401,1,1,,C -> G,,,,,65,SNP (transversion),,,26.2%,2.3E-16
A,2237463,2237463,1,1,,C -> A,,,,,145,SNP (transversion),,,34.5%,1.0E-61
T,2237476,2237476,1,1,,G -> T,,,,,161,SNP (transversion),,,28.0%,6.0E-51
A,2237478,2237478,1,1,,C -> A,,,,,165,SNP (transversion),,,27.3%,4.8E-46
T,2237492,2237492,1,1,,G -> T,,,,,199,SNP (transversion),,,31.7%,1.4E-74
G,2237494,2237494,1,1,,T -> G,,,,,200,SNP (transversion),,,29.0%,3.1E-66
G,2237508,2237508,1,1,,A -> G,,,,,235,SNP (transition),,,32.8%,1.1E-99
G,2237591,2237591,1,1,,A -> G,,,,,363,SNP (transition),,,44.4%,1.4E-264
A,2237602,2237602,1,1,,C -> A,,,,,394,SNP (transversion),,,50.8%,4.9E-324
A,2237621,2237621,1,1,,G -> A,,,,,421,SNP (transition),,,50.4%,2.6E-300
G,2237632,2237632,1,1,,A -> G,,,,,433,SNP (transition),,,46.0%,7.5E-311
T,2237635,2237635,1,1,,C -> T,,,,,438,SNP (transition),,,25.1%,9.0E-138
C,2237663,2237663,1,1,,T -> C,,,,,438,SNP (transition),,,37.4%,1.1E-221
G,2237739,2237739,1,1,,A -> G,,,,,244,SNP (transition),,,43.0%,3.2E-213
G,2237905,2237905,1,1,,A -> G,,,,,91,SNP (transition),,,27.5%,3.2E-19
G,2312591,2312591,1,1,,C -> G,,,,,339,SNP (transversion),,,32.4%,2.1E-228
T,2312613,2312613,1,1,,G -> T,,,,,397,SNP (transversion),,,46.6%,0.0
G,2312632,2312632,1,1,,A -> G,,,,,413,SNP (transition),,,45.3%,0.0
T,2312658,2312658,1,1,,A -> T,,,,,394,SNP (transversion),,,56.9%,0.0
T,2312663,2312663,1,1,,G -> T,,,,,389,SNP (transversion),,,63.0%,0.0
TT,2312672,2312673,2,1,,CC -> TT,,,,,389 -> 390,Substitution,,,36.4% -> 36.5%,5.7E-303
A,2312678,2312678,1,1,,G -> A,,,,,384,SNP (transition),,,35.7%,7.1E-291
T,2312736,2312736,1,1,,G -> T,,,,,352,SNP (transversion),,,51.4%,0.0
G,2312761,2312761,1,1,,T -> G,,,,,218,SNP (transversion),,,47.2%,3.8E-266
G,2312773,2312773,1,1,,A -> G,,,,,206,SNP (transition),,,51.5%,3.1E-279
A,2312779,2312779,1,1,,T -> A,,,,,201,SNP (transversion),,,32.8%,6.3E-158
T,2312782,2312782,1,1,,C -> T,,,,,197,SNP (transition),,,33.0%,2.9E-136
,2312787,2312791,5,1,,-ATGGC,,,,,199 -> 204,Deletion,,,33.3% -> 34.2%,1.7E-122
C,2312804,2312804,1,1,,T -> C,,,,,202,SNP (transition),,,34.2%,3.0E-180
T,2312852,2312852,1,1,,C -> T,,,,,199,SNP (transition),,,29.6%,3.1E-138
T,2312857,2312857,1,1,,G -> T,,,,,197,SNP (transversion),,,28.9%,6.7E-133
G,2313323,2313323,1,1,,T -> G,,,,,249,SNP (transversion),,,25.3%,2.5E-117
C,2496475,2496475,1,1,,T -> C,,,,,233,SNP (transition),,,54.1%,0.0
A,2496483,2496483,1,1,,G -> A,,,,,246,SNP (transition),,,40.2%,1.6E-276
T,2496485,2496485,1,1,,C -> T,,,,,246,SNP (transition),,,58.9%,0.0
A,2496489,2496489,1,1,,G -> A,,,,,259,SNP (transition),,,35.5%,2.8E-223
T,2496504,2496504,1,1,,C -> T,,,,,290,SNP (transition),,,29.0%,1.4E-111
A,2496512,2496512,1,1,,G -> A,,,,,299,SNP (transition),,,38.8%,5.0E-171
T,2496866,2496866,1,1,,C -> T,,,,,164,SNP (transition),,,30.5%,1.7E-63
A,2513077,2513077,1,1,,G -> A,,,,,417,SNP (transition),,,29.0%,6.2E-208
G,2513461,2513461,1,1,,T -> G,,,,,199,SNP (transversion),,,25.6%,2.5E-60
T,2513463,2513463,1,1,,C -> T,,,,,201,SNP (transition),,,25.4%,4.4E-60
GA,2513469,2513470,2,1,,TC -> GA,,,,,204,Substitution,,,26.0% -> 26.5%,1.2E-64
T,2513501,2513501,1,1,,C -> T,,,,,200,SNP (transition),,,33.5%,3.3E-55
G,2513534,2513534,1,1,,T -> G,,,,,210,SNP (transversion),,,32.4%,1.8E-48
C,2513788,2513788,1,1,,G -> C,,,,,227,SNP (transversion),,,33.5%,8.9E-175
G,2513792,2513792,1,1,,A -> G,,,,,230,SNP (transition),,,29.6%,2.2E-145
G,2596983,2596983,1,1,,A -> G,,,,,328,SNP (transition),,,26.5%,4.3E-198
A,2596988,2596988,1,1,,T -> A,,,,,339,SNP (transversion),,,25.7%,5.7E-188
T,2596992,2596992,1,1,,C -> T,,,,,337,SNP (transition),,,26.4%,1.6E-193
C,2596994,2596994,1,1,,T -> C,,,,,338,SNP (transition),,,26.0%,1.6E-199
C,2597009,2597009,1,1,,T -> C,,,,,337,SNP (transition),,,34.4%,2.3E-244
A,2597051,2597051,1,1,,T -> A,,,,,350,SNP (transversion),,,31.1%,3.8E-213
AC,2597056,2597057,2,1,,GT -> AC,,,,,352,Substitution,,,32.7%,1.2E-227
A,2608345,2608345,1,1,,G -> A,,,,,467,SNP (transition),,,25.1%,6.2E-101
T,2608349,2608349,1,1,,G -> T,,,,,470,SNP (transversion),,,27.4%,1.0E-116
C,2608422,2608422,1,1,,T -> C,,,,,432,SNP (transition),,,26.6%,5.8E-136
G,2608431,2608431,1,1,,A -> G,,,,,407,SNP (transition),,,28.5%,4.8E-141
C,2608474,2608474,1,1,,T -> C,,,,,256,SNP (transition),,,39.8%,6.2E-132
T,2608475,2608475,1,1,,A -> T,,,,,254,SNP (transversion),,,77.6%,1.7E-239
A,2608493,2608493,1,1,,T -> A,,,,,210,SNP (transversion),,,45.7%,2.7E-103
G,2608529,2608529,1,1,,T -> G,,,,,157,SNP (transversion),,,30.6%,1.5E-16
C,2635729,2635729,1,1,,A -> C,,,,,201,SNP (transversion),,,33.8%,4.7E-96
T,2635734,2635734,1,1,,C -> T,,,,,200,SNP (transition),,,37.0%,7.3E-108
C,2635794,2635794,1,1,,A -> C,,,,,175,SNP (transversion),,,32.0%,1.1E-29
G,2635822,2635822,1,1,,C -> G,,,,,164,SNP (transversion),,,25.6%,3.0E-22
C,2635965,2635965,1,1,,T -> C,,,,,200,SNP (transition),,,31.0%,1.0E-60
C,2636006,2636006,1,1,,T -> C,,,,,183,SNP (transition),,,28.4%,4.0E-64
T,2636063,2636063,1,1,,A -> T,,,,,168,SNP (transversion),,,26.2%,2.2E-61
C,2636070,2636070,1,1,,G -> C,,,,,172,SNP (transversion),,,26.7%,1.1E-73
C,2636078,2636078,1,1,,T -> C,,,,,171,SNP (transition),,,26.3%,2.7E-67
C,2636086,2636086,1,1,,T -> C,,,,,178,SNP (transition),,,28.7%,3.9E-63
T,2636134,2636134,1,1,,C -> T,,,,,232,SNP (transition),,,27.2%,1.2E-28
TCG,2636166,2636166,1,1,,A -> TCG,,,,,231,Insertion,,,31.2%,7.9E-37
C,2636213,2636213,1,1,,T -> C,,,,,186,SNP (transition),,,39.2%,6.2E-26
A,2636230,2636230,1,1,,G -> A,,,,,191,SNP (transition),,,33.5%,9.5E-19
C,2848166,2848166,1,1,,T -> C,,,,,251,SNP (transition),,,31.5%,1.5E-147
C,2848227,2848227,1,1,,T -> C,,,,,425,SNP (transition),,,40.7%,0.0
C,2848258,2848258,1,1,,A -> C,,,,,452,SNP (transversion),,,54.6%,0.0
G,2848265,2848265,1,1,,A -> G,,,,,453,SNP (transition),,,53.6%,0.0
G,2848357,2848357,1,1,,A -> G,,,,,329,SNP (transition),,,36.8%,2.4E-295
G,2848380,2848380,1,1,,T -> G,,,,,252,SNP (transversion),,,31.0%,6.3E-184
C,2892626,2892626,1,1,,G -> C,,,,,461,SNP (transversion),,,46.4%,0.0
T,2906784,2906784,1,1,,G -> T,,,,,401,SNP (transversion),,,32.7%,5.9E-194
G,2906881,2906881,1,1,,T -> G,,,,,74,SNP (transversion),,,52.7%,5.7E-81
C,2906974,2906974,1,1,,A -> C,,,,,192,SNP (transversion),,,42.2%,5.4E-76
T,2907207,2907207,1,1,,G -> T,,,,,253,SNP (transversion),,,38.3%,1.2E-11
A,2907220,2907220,1,1,,G -> A,,,,,270,SNP (transition),,,29.3%,2.2E-8
T,2907248,2907248,1,1,,C -> T,,,,,249,SNP (transition),,,35.3%,1.1E-8
G,2907286,2907286,1,1,,A -> G,,,,,172,SNP (transition),,,36.0%,3.5E-25
GTA,2907333,2907335,3,1,,TGG -> GTA,,,,,85,Substitution,,,38.8%,3.0E-55
C,2907391,2907391,1,1,,T -> C,,,,,80,SNP (transition),,,33.8%,9.2E-34
TT,2907520,2907519,0,1,,+TT,,,,,176,Insertion,,,25.0%,3.9E-104
,2907527,2907528,2,1,,-CT,,,,,180 -> 184,Deletion,,,25.0% -> 25.6%,7.5E-86
CA,2907531,2907532,2,1,,TC -> CA,,,,,183 -> 185,Substitution,,,25.4% -> 25.7%,3.9E-121
CT,2907534,2907535,2,1,,GC -> CT,,,,,186 -> 188,Substitution,,,25.0% -> 25.3%,2.0E-106
,2907740,2907740,1,1,,(A)3 -> (A)2,,,,,138,Deletion (tandem repeat),,,26.8%,3.6E-14
T,2907775,2907775,1,1,,G -> T,,,,,155,SNP (transversion),,,45.2%,1.2E-144
A,2907852,2907852,1,1,,T -> A,,,,,81,SNP (transversion),,,42.0%,4.6E-23
A,2907956,2907956,1,1,,G -> A,,,,,261,SNP (transition),,,54.8%,2.4E-72
T,2907984,2907984,1,1,,C -> T,,,,,287,SNP (transition),,,31.0%,8.8E-23
A,2907997,2907997,1,1,,C -> A,,,,,280,SNP (transversion),,,46.8%,1.5E-44
T,2908037,2908037,1,1,,C -> T,,,,,292,SNP (transition),,,40.4%,2.2E-42
G,2908173,2908173,1,1,,T -> G,,,,,102,SNP (transversion),,,40.2%,3.5E-46
G,2908230,2908230,1,1,,T -> G,,,,,165,SNP (transversion),,,33.3%,9.7E-51
T,2908307,2908307,1,1,,A -> T,,,,,110,SNP (transversion),,,30.0%,3.5E-42
T,2908324,2908324,1,1,,C -> T,,,,,112,SNP (transition),,,49.1%,2.7E-89
T,2909917,2909917,1,1,,C -> T,,,,,225,SNP (transition),,,36.0%,8.8E-133
A,2910033,2910033,1,1,,G -> A,,,,,180,SNP (transition),,,28.3%,7.5E-63
A,2910073,2910073,1,1,,T -> A,,,,,221,SNP (transversion),,,36.7%,2.4E-62
C,2910091,2910091,1,1,,T -> C,,,,,275,SNP (transition),,,36.4%,6.2E-184
A,2910118,2910117,0,1,,(A)3 -> (A)4,,,,,337,Insertion (tandem repeat),,,26.4%,8.9E-176
G,2910143,2910143,1,1,,C -> G,,,,,321,SNP (transversion),,,38.0%,6.1E-300
T,2929339,2929339,1,1,,C -> T,,,,,371,SNP (transition),,,28.0%,2.4E-239
C,2929387,2929387,1,1,,T -> C,,,,,451,SNP (transition),,,49.7%,0.0
C,2929394,2929394,1,1,,A -> C,,,,,452,SNP (transversion),,,49.6%,0.0
T,2929498,2929498,1,1,,C -> T,,,,,588,SNP (transition),,,58.8%,0.0
T,2929502,2929502,1,1,,C -> T,,,,,582,SNP (transition),,,62.4%,0.0
T,2929507,2929507,1,1,,C -> T,,,,,582,SNP (transition),,,61.3%,0.0
A,2966213,2966213,1,1,,T -> A,,,,,201,SNP (transversion),,,25.4%,1.1E-35
T,2968008,2968008,1,1,,C -> T,,,,,126,SNP (transition),,,96.8%,0.0
G,2968023,2968023,1,1,,A -> G,,,,,106,SNP (transition),,,74.5%,2.9E-244
C,2968027,2968027,1,1,,T -> C,,,,,101,SNP (transition),,,75.2%,1.3E-235
A,2968039,2968039,1,1,,G -> A,,,,,104,SNP (transition),,,58.7%,1.6E-172
G,2968051,2968051,1,1,,A -> G,,,,,102,SNP (transition),,,61.8%,1.2E-167
,2968055,2968055,1,1,,-A,,,,,100,Deletion,,,57.0%,5.1E-109
C,2968065,2968065,1,1,,A -> C,,,,,88,SNP (transversion),,,50.0%,2.5E-107
ATG,2968077,2968079,3,1,,GAA -> ATG,,,,,69,Substitution,,,27.5%,1.0E-35
T,2968086,2968086,1,1,,C -> T,,,,,60,SNP (transition),,,25.0%,1.5E-24
T,2968378,2968378,1,1,,C -> T,,,,,128,SNP (transition),,,52.3%,3.7E-33
T,2968460,2968460,1,1,,C -> T,,,,,113,SNP (transition),,,28.3%,6.6E-37
,2968462,2968462,1,1,,(C)3 -> (C)2,,,,,117,Deletion (tandem repeat),,,27.4%,1.0E-12
G,2968476,2968476,1,1,,A -> G,,,,,118,SNP (transition),,,39.8%,4.8E-99
A,2968492,2968492,1,1,,G -> A,,,,,156,SNP (transition),,,40.4%,1.5E-151
T,2968546,2968546,1,1,,G -> T,,,,,218,SNP (transversion),,,25.7%,1.1E-82
G,2968612,2968612,1,1,,T -> G,,,,,286,SNP (transversion),,,43.4%,6.2E-215
A,2968615,2968615,1,1,,C -> A,,,,,289,SNP (transversion),,,28.0%,2.3E-98
T,2968625,2968625,1,1,,G -> T,,,,,292,SNP (transversion),,,25.3%,2.3E-86
A,2968634,2968648,15,1,,GTGGTAGCGAGCCTG -> A,,,,,288 -> 304,Deletion,,,25.0% -> 26.4%,2.0E-19
A,2968709,2968709,1,1,,G -> A,,,,,291,SNP (transition),,,25.4%,5.3E-101
G,2969383,2969383,1,1,,A -> G,,,,,164,SNP (transition),,,30.5%,3.6E-98
G,2975583,2975583,1,1,,A -> G,,,,,469,SNP (transition),,,28.8%,0.0
C,2975607,2975607,1,1,,A -> C,,,,,478,SNP (transversion),,,44.6%,0.0
A,2975646,2975646,1,1,,G -> A,,,,,453,SNP (transition),,,39.3%,0.0
C,2975656,2975656,1,1,,T -> C,,,,,460,SNP (transition),,,33.5%,0.0
G,2975663,2975663,1,1,,A -> G,,,,,454,SNP (transition),,,28.2%,4.3E-320
C,3007217,3007217,1,1,,T -> C,,,,,101,SNP (transition),,,26.7%,2.4E-57
A,3007218,3007218,1,1,,T -> A,,,,,100,SNP (transversion),,,36.0%,1.9E-81
C,3163642,3163642,1,1,,A -> C,,,,,48,SNP (transversion),,,27.1%,3.7E-27
C,3163643,3163643,1,1,,T -> C,,,,,49,SNP (transition),,,34.7%,1.6E-35
TGGCGG,3163645,3163650,6,1,,GTTGAT -> TGGCGG,,,,,49 -> 52,Substitution,,,34.6% -> 44.9%,1.2E-44
A,3163652,3163652,1,1,,G -> A,,,,,54,SNP (transition),,,64.8%,1.8E-105
GC,3163659,3163660,2,1,,CG -> GC,,,,,67 -> 70,Substitution,,,23.9% -> 31.4%,2.3E-42
T,3163662,3163662,1,1,,A -> T,,,,,70,SNP (transversion),,,38.6%,2.1E-54
A,3163666,3163665,0,1,,+A,,,,,71,Insertion,,,29.6%,6.5E-44
CCC,3163667,3163669,3,1,,GTG -> CCC,,,,,73,Substitution,,,32.9%,6.9E-49
CGG,3163671,3163673,3,1,,GAA -> CGG,,,,,73 -> 74,Substitution,,,31.1% -> 31.5%,1.5E-48
CA,3163676,3163677,2,1,,AT -> CA,,,,,75,Substitution,,,32.0%,1.5E-48
TCA,3163679,3163681,3,1,,AAC -> TCA,,,,,75,Substitution,,,32.0%,2.3E-48
G,3163683,3163683,1,1,,A -> G,,,,,78,SNP (transition),,,33.3%,5.1E-53
TTT,3163685,3163687,3,1,,GAA -> TTT,,,,,78 -> 80,Substitution,,,30.0% -> 30.8%,4.6E-48
T,3163697,3163697,1,1,,G -> T,,,,,86,SNP (transversion),,,36.0%,3.4E-64
,3163718,3163718,1,1,,-G,,,,,94,Deletion,,,27.7%,1.9E-27
T,3163768,3163768,1,1,,G -> T,,,,,105,SNP (transversion),,,34.3%,7.0E-52
G,3163778,3163778,1,1,,A -> G,,,,,94,SNP (transition),,,25.5%,2.8E-36
C,3163796,3163796,1,1,,A -> C,,,,,62,SNP (transversion),,,30.6%,1.2E-32
G,3163802,3163802,1,1,,C -> G,,,,,53,SNP (transversion),,,39.6%,1.7E-32
A,3163804,3163804,1,1,,T -> A,,,,,52,SNP (transversion),,,32.7%,3.4E-23
T,3163833,3163833,1,1,,A -> T,,,,,38,SNP (transversion),,,34.2%,1.0E-28
G,3163834,3163834,1,1,,T -> G,,,,,37,SNP (transversion),,,48.6%,1.7E-44
A,3163851,3163851,1,1,,C -> A,,,,,44,SNP (transversion),,,34.1%,1.5E-16
G,3163863,3163863,1,1,,A -> G,,,,,63,SNP (transition),,,47.6%,8.2E-67
C,3163905,3163905,1,1,,A -> C,,,,,163,SNP (transversion),,,25.2%,6.6E-81
T,3163910,3163910,1,1,,G -> T,,,,,163,SNP (transversion),,,46.0%,1.2E-170
C,3163913,3163913,1,1,,G -> C,,,,,163,SNP (transversion),,,35.0%,3.9E-127
C,3163918,3163918,1,1,,T -> C,,,,,168,SNP (transition),,,30.4%,9.0E-85
G,3163923,3163923,1,1,,A -> G,,,,,166,SNP (transition),,,39.2%,2.2E-103
G,3163924,3163924,1,1,,A -> G,,,,,167,SNP (transition),,,30.5%,6.3E-85
A,3163933,3163933,1,1,,C -> A,,,,,170,SNP (transversion),,,30.0%,2.1E-79
T,3163956,3163956,1,1,,C -> T,,,,,187,SNP (transition),,,38.5%,1.1E-113
G,3224984,3224984,1,1,,T -> G,,,,,102,SNP (transversion),,,26.5%,7.0E-13
C,3303928,3303928,1,1,,G -> C,,,,,56,SNP (transversion),,,32.1%,1.3E-38
C,3303931,3303931,1,1,,G -> C,,,,,68,SNP (transversion),,,38.2%,6.5E-55
T,3311298,3311298,1,1,,G -> T,,,,,202,SNP (transversion),,,46.5%,1.4E-120
A,3311934,3311934,1,1,,C -> A,,,,,387,SNP (transversion),,,34.9%,1.4E-271
A,3311937,3311937,1,1,,G -> A,,,,,388,SNP (transition),,,35.3%,8.5E-263
C,3311954,3311954,1,1,,G -> C,,,,,401,SNP (transversion),,,29.9%,6.5E-268
C,3311970,3311970,1,1,,A -> C,,,,,384,SNP (transversion),,,38.8%,0.0
T,3311987,3311987,1,1,,C -> T,,,,,361,SNP (transition),,,36.8%,0.0
T,3312001,3312001,1,1,,A -> T,,,,,361,SNP (transversion),,,43.5%,0.0
A,3312017,3312017,1,1,,G -> A,,,,,332,SNP (transition),,,27.1%,7.8E-215
,3312027,3312027,1,1,,-G,,,,,302,Deletion,,,33.4%,3.1E-171
A,3312039,3312039,1,1,,C -> A,,,,,273,SNP (transversion),,,27.5%,2.4E-172
A,3312044,3312044,1,1,,G -> A,,,,,256,SNP (transition),,,32.8%,2.5E-175
C,3312049,3312049,1,1,,T -> C,,,,,245,SNP (transition),,,36.3%,4.0E-217
C,3312089,3312089,1,1,,T -> C,,,,,244,SNP (transition),,,30.3%,1.4E-188
C,3312091,3312091,1,1,,T -> C,,,,,246,SNP (transition),,,29.3%,5.0E-175
A,3350700,3350700,1,1,,G -> A,,,,,81,SNP (transition),,,45.7%,9.0E-74
C,3350704,3350704,1,1,,T -> C,,,,,75,SNP (transition),,,38.7%,3.9E-24
A,3350740,3350740,1,1,,T -> A,,,,,61,SNP (transversion),,,44.3%,6.6E-22
G,3350770,3350770,1,1,,A -> G,,,,,118,SNP (transition),,,33.1%,1.2E-47
C,3350783,3350783,1,1,,A -> C,,,,,132,SNP (transversion),,,29.5%,1.2E-41
A,3350874,3350874,1,1,,G -> A,,,,,301,SNP (transition),,,42.9%,4.2E-274
T,3351026,3351026,1,1,,A -> T,,,,,650,SNP (transversion),,,28.2%,1.2E-184
G,3351046,3351046,1,1,,T -> G,,,,,619,SNP (transversion),,,31.0%,7.5E-203
C,3351067,3351067,1,1,,G -> C,,,,,603,SNP (transversion),,,30.3%,1.6E-299
C,3351077,3351077,1,1,,T -> C,,,,,593,SNP (transition),,,34.1%,1.8E-322
A,3351080,3351080,1,1,,C -> A,,,,,601,SNP (transversion),,,40.9%,0.0
G,3351127,3351127,1,1,,A -> G,,,,,590,SNP (transition),,,27.1%,2.3E-143
G,3351211,3351211,1,1,,T -> G,,,,,307,SNP (transversion),,,34.5%,4.6E-98
C,3351215,3351215,1,1,,T -> C,,,,,295,SNP (transition),,,31.5%,5.8E-91
A,3351281,3351281,1,1,,G -> A,,,,,419,SNP (transition),,,26.0%,8.7E-56
T,3351372,3351372,1,1,,C -> T,,,,,204,SNP (transition),,,31.9%,6.5E-46
G,3351373,3351373,1,1,,C -> G,,,,,202,SNP (transversion),,,32.2%,1.6E-58
G,3431479,3431479,1,1,,A -> G,,,,,103,SNP (transition),,,33.0%,2.7E-65
A,3431526,3431526,1,1,,G -> A,,,,,67,SNP (transition),,,29.9%,5.4E-40
C,3431543,3431543,1,1,,A -> C,,,,,60,SNP (transversion),,,30.0%,6.2E-22
T,3431620,3431620,1,1,,A -> T,,,,,183,SNP (transversion),,,46.4%,3.6E-168
A,3431621,3431621,1,1,,C -> A,,,,,185,SNP (transversion),,,31.9%,1.1E-128
T,3431660,3431660,1,1,,C -> T,,,,,284,SNP (transition),,,60.6%,0.0
T,3431667,3431667,1,1,,C -> T,,,,,310,SNP (transition),,,26.5%,6.9E-195
T,3431786,3431786,1,1,,C -> T,,,,,573,SNP (transition),,,43.8%,0.0
A,3431826,3431826,1,1,,G -> A,,,,,616,SNP (transition),,,56.3%,0.0
G,3431832,3431832,1,1,,A -> G,,,,,631,SNP (transition),,,32.6%,0.0
G,3431859,3431859,1,1,,T -> G,,,,,618,SNP (transversion),,,29.1%,5.1E-273
,3431870,3431870,1,1,,(G)5 -> (G)4,,,,,590,Deletion (tandem repeat),,,25.1%,2.9E-113
,3431886,3431886,1,1,,(C)4 -> (C)3,,,,,501,Deletion (tandem repeat),,,39.5%,2.3E-157
T,3431923,3431923,1,1,,C -> T,,,,,380,SNP (transition),,,30.0%,2.6E-119
G,3431976,3431976,1,1,,A -> G,,,,,261,SNP (transition),,,46.7%,9.6E-217
T,3432011,3432011,1,1,,C -> T,,,,,222,SNP (transition),,,36.9%,2.9E-119
T,3432023,3432023,1,1,,G -> T,,,,,178,SNP (transversion),,,56.2%,4.0E-179
A,3432041,3432041,1,1,,T -> A,,,,,177,SNP (transversion),,,72.9%,1.2E-266
A,3435771,3435771,1,1,,G -> A,,,,,201,SNP (transition),,,27.9%,9.2E-113
A,3435774,3435774,1,1,,G -> A,,,,,199,SNP (transition),,,26.6%,1.3E-105
C,3435776,3435776,1,1,,T -> C,,,,,197,SNP (transition),,,25.4%,1.6E-98
A,3435792,3435792,1,1,,T -> A,,,,,201,SNP (transversion),,,26.9%,1.1E-91
G,3435805,3435805,1,1,,T -> G,,,,,195,SNP (transversion),,,25.1%,2.4E-96
A,3435807,3435807,1,1,,C -> A,,,,,194,SNP (transversion),,,26.8%,1.2E-98
T,3435809,3435809,1,1,,A -> T,,,,,193,SNP (transversion),,,26.4%,2.1E-96
AC,3435817,3435818,2,1,,TA -> AC,,,,,193 -> 194,Substitution,,,26.4% -> 26.8%,2.7E-106
,3435829,3435839,11,1,,-TATCAGGCCGC,,,,,188 -> 192,Deletion,,,26.0% -> 26.6%,1.8E-64
T,3435841,3435841,1,1,,A -> T,,,,,187,SNP (transversion),,,27.3%,3.2E-97
T,3435844,3435844,1,1,,G -> T,,,,,187,SNP (transversion),,,26.7%,7.9E-100
T,3435874,3435874,1,1,,A -> T,,,,,172,SNP (transversion),,,28.5%,1.5E-94
T,3435877,3435877,1,1,,C -> T,,,,,171,SNP (transition),,,26.9%,1.6E-87
C,3435884,3435884,1,1,,G -> C,,,,,158,SNP (transversion),,,26.6%,5.3E-84
G,3451491,3451491,1,1,,A -> G,,,,,196,SNP (transition),,,26.0%,1.5E-126
C,3451493,3451493,1,1,,T -> C,,,,,193,SNP (transition),,,27.5%,5.3E-117
G,3451518,3451518,1,1,,C -> G,,,,,203,SNP (transversion),,,44.3%,1.9E-247
T,3452807,3452807,1,1,,A -> T,,,,,251,SNP (transversion),,,26.3%,5.2E-157
A,3452814,3452814,1,1,,G -> A,,,,,247,SNP (transition),,,39.3%,3.6E-192
G,3452816,3452816,1,1,,T -> G,,,,,246,SNP (transversion),,,30.1%,7.0E-181
C,3452818,3452818,1,1,,A -> C,,,,,248,SNP (transversion),,,31.9%,1.9E-187
A,3452830,3452830,1,1,,G -> A,,,,,261,SNP (transition),,,31.8%,9.1E-197
G,3452832,3452832,1,1,,A -> G,,,,,261,SNP (transition),,,33.0%,2.1E-205
G,3452841,3452841,1,1,,A -> G,,,,,257,SNP (transition),,,49.0%,1.4E-277
C,3680832,3680832,1,1,,T -> C,,,,,403,SNP (transition),,,38.2%,9.7E-256
A,3680841,3680841,1,1,,G -> A,,,,,393,SNP (transition),,,41.5%,6.7E-278
A,3680859,3680859,1,1,,G -> A,,,,,255,SNP (transition),,,54.5%,1.6E-259
T,3714877,3714877,1,1,,G -> T,,,,,233,SNP (transversion),,,27.9%,1.6E-85
G,3729214,3729214,1,1,,C -> G,,,,,184,SNP (transversion),,,36.4%,4.7E-184
A,3729217,3729217,1,1,,C -> A,,,,,185,SNP (transversion),,,35.1%,2.3E-177
GGAG,3729221,3729224,4,1,,TTTC -> GGAG,,,,,173 -> 176,Substitution,,,30.5% -> 31.3%,1.1E-149
G,3729227,3729227,1,1,,A -> G,,,,,167,SNP (transition),,,30.5%,8.7E-136
C,3729229,3729229,1,1,,G -> C,,,,,161,SNP (transversion),,,29.2%,7.1E-129
GT,3729231,3729232,2,1,,CA -> GT,,,,,158 -> 159,Substitution,,,27.8% -> 28.3%,2.6E-115
GG,3729234,3729235,2,1,,AA -> GG,,,,,155 -> 158,Substitution,,,27.1% -> 27.8%,1.5E-109
T,3729245,3729245,1,1,,A -> T,,,,,126,SNP (transversion),,,37.3%,1.2E-78
T,3729253,3729252,0,1,,(T)3 -> (T)4,,,,,107,Insertion (tandem repeat),,,42.1%,8.5E-83
T,3729294,3729294,1,1,,A -> T,,,,,74,SNP (transversion),,,28.4%,5.9E-31
A,3729330,3729330,1,1,,G -> A,,,,,72,SNP (transition),,,26.4%,1.3E-14
AC,3729647,3729648,2,1,,TT -> AC,,,,,16 -> 18,Substitution,,,50.0% -> 55.6%,2.8E-10
CAC,3729652,3729654,3,1,,TTT -> CAC,,,,,22 -> 24,Substitution,,,63.6% -> 66.7%,3.0E-23
T,3729656,3729656,1,1,,G -> T,,,,,27,SNP (transversion),,,70.4%,2.1E-32
GGG,3729658,3729660,3,1,,TTT -> GGG,,,,,25 -> 26,Substitution,,,69.2% -> 72.0%,1.2E-34
T,3729662,3729662,1,1,,C -> T,,,,,26,SNP (transition),,,73.1%,7.9E-35
C,3729664,3729664,1,1,,T -> C,,,,,28,SNP (transition),,,71.4%,2.9E-36
,3729669,3729670,2,1,,-CA,,,,,31,Deletion,,,64.5%,2.1E-11
T,3729672,3729672,1,1,,C -> T,,,,,32,SNP (transition),,,90.6%,3.8E-52
A,3729679,3729679,1,1,,G -> A,,,,,37,SNP (transition),,,100.0%,1.6E-89
T,3729681,3729680,0,1,,+T,,,,,38,Insertion,,,97.4%,3.0E-84
A,3730316,3730316,1,1,,G -> A,,,,,372,SNP (transition),,,30.4%,1.3E-65
AGA,3756590,3756592,3,1,,CCC -> AGA,,,,,202 -> 206,Substitution,,,28.4% -> 28.7%,1.3E-71
C,3783803,3783803,1,1,,T -> C,,,,,235,SNP (transition),,,31.1%,5.7E-187
CG,3783815,3783816,2,1,,TA -> CG,,,,,241 -> 244,Substitution,,,35.2% -> 35.7%,4.6E-217
C,3783820,3783819,0,1,,(C)3 -> (C)4,,,,,241,Insertion (tandem repeat),,,34.0%,1.6E-205
A,3783829,3783829,1,1,,G -> A,,,,,241,SNP (transition),,,41.1%,2.0E-208
G,3783847,3783847,1,1,,T -> G,,,,,255,SNP (transversion),,,50.2%,2.5E-309
C,3783849,3783849,1,1,,A -> C,,,,,260,SNP (transversion),,,51.5%,0.0
C,3783862,3783862,1,1,,T -> C,,,,,266,SNP (transition),,,54.1%,0.0
G,3783866,3783866,1,1,,C -> G,,,,,266,SNP (transversion),,,55.3%,0.0
A,3783868,3783868,1,1,,G -> A,,,,,267,SNP (transition),,,55.8%,0.0
A,3783870,3783870,1,1,,T -> A,,,,,268,SNP (transversion),,,55.6%,0.0
T,3783881,3783880,0,1,,+T,,,,,254,Insertion,,,57.9%,3.0E-309
T,3783914,3783914,1,1,,C -> T,,,,,192,SNP (transition),,,53.1%,8.3E-220
CAT,3783932,3783934,3,1,,ATG -> CAT,,,,,170 -> 178,Substitution,,,47.1% -> 47.8%,9.2E-148
T,3783941,3783941,1,1,,G -> T,,,,,157,SNP (transversion),,,40.1%,2.1E-82
G,3783943,3783943,1,1,,A -> G,,,,,157,SNP (transition),,,43.9%,6.6E-121
C,3783948,3783948,1,1,,A -> C,,,,,161,SNP (transversion),,,45.3%,4.1E-129
T,3783950,3783950,1,1,,C -> T,,,,,154,SNP (transition),,,42.9%,3.1E-108
A,3783952,3783952,1,1,,T -> A,,,,,150,SNP (transversion),,,44.0%,1.2E-102
T,3783962,3783962,1,1,,A -> T,,,,,145,SNP (transversion),,,40.7%,2.2E-89
C,3783964,3783964,1,1,,T -> C,,,,,145,SNP (transition),,,40.7%,2.2E-89
C,3783972,3783972,1,1,,G -> C,,,,,141,SNP (transversion),,,35.5%,2.3E-67
G,3784019,3784019,1,1,,T -> G,,,,,136,SNP (transversion),,,30.9%,2.6E-66
A,3784021,3784021,1,1,,G -> A,,,,,133,SNP (transition),,,30.1%,1.2E-66
T,3784025,3784025,1,1,,A -> T,,,,,131,SNP (transversion),,,29.8%,1.1E-68
C,3784034,3784034,1,1,,G -> C,,,,,136,SNP (transversion),,,30.1%,2.9E-64
A,3784041,3784041,1,1,,G -> A,,,,,138,SNP (transition),,,27.5%,1.8E-65
C,3784060,3784060,1,1,,T -> C,,,,,145,SNP (transition),,,28.3%,5.4E-67
GGA,3791992,3791994,3,1,,ATT -> GGA,,,,,370 -> 375,Substitution,,,25.4% -> 26.1%,1.3E-225
T,3791995,3791995,1,1,,G -> T,,,,,380,SNP (transversion),,,34.7%,4.0E-252
T,3792041,3792041,1,1,,G -> T,,,,,420,SNP (transversion),,,33.8%,1.1E-226
A,3792072,3792072,1,1,,G -> A,,,,,418,SNP (transition),,,48.6%,0.0
A,3886809,3886809,1,1,,G -> A,,,,,142,SNP (transition),,,38.7%,2.6E-60
A,3887153,3887153,1,1,,C -> A,,,,,403,SNP (transversion),,,25.6%,2.7E-80
C,3958980,3958980,1,1,,T -> C,,,,,359,SNP (transition),,,28.4%,2.7E-225
AC,3958982,3958983,2,1,,CT -> AC,,,,,380 -> 386,Substitution,,,32.6% -> 33.2%,9.9E-295
A,3958987,3958987,1,1,,G -> A,,,,,425,SNP (transition),,,36.9%,0.0
C,3958993,3958993,1,1,,G -> C,,,,,462,SNP (transversion),,,37.2%,0.0
G,3958996,3958996,1,1,,C -> G,,,,,478,SNP (transversion),,,37.0%,0.0
T,3958999,3958998,0,1,,+T,,,,,498,Insertion,,,35.3%,0.0
CG,3959001,3959002,2,1,,TC -> CG,,,,,519 -> 535,Substitution,,,48.2% -> 49.5%,0.0
G,3959009,3959009,1,1,,A -> G,,,,,595,SNP (transition),,,56.0%,0.0
C,3959016,3959016,1,1,,G -> C,,,,,645,SNP (transversion),,,60.5%,0.0
A,3959023,3959023,1,1,,G -> A,,,,,705,SNP (transition),,,51.5%,0.0
C,3959025,3959025,1,1,,T -> C,,,,,727,SNP (transition),,,67.4%,0.0
A,3959093,3959093,1,1,,G -> A,,,,,631,SNP (transition),,,44.8%,0.0
CCA,3959096,3959098,3,1,,TTT -> CCA,,,,,559 -> 591,Substitution,,,53.8% -> 55.5%,0.0
TCA,3959103,3959105,3,1,,CTT -> TCA,,,,,490 -> 509,Substitution,,,44.9% -> 47.9%,0.0
G,3959107,3959107,1,1,,A -> G,,,,,471,SNP (transition),,,44.2%,0.0
C,3959109,3959109,1,1,,G -> C,,,,,454,SNP (transversion),,,40.3%,0.0
C,3959112,3959112,1,1,,T -> C,,,,,430,SNP (transition),,,37.2%,0.0
CG,3959115,3959116,2,1,,AT -> CG,,,,,402 -> 415,Substitution,,,33.1% -> 34.9%,0.0
C,3959122,3959122,1,1,,T -> C,,,,,362,SNP (transition),,,26.0%,2.9E-222
G,3959124,3959124,1,1,,C -> G,,,,,358,SNP (transversion),,,26.0%,6.1E-220
GGA,3959627,3959629,3,1,,TTC -> GGA,,,,,96 -> 97,Substitution,,,30.9% -> 31.3%,5.6E-51
G,3959632,3959632,1,1,,T -> G,,,,,104,SNP (transversion),,,33.7%,4.9E-64
G,3959634,3959634,1,1,,C -> G,,,,,110,SNP (transversion),,,37.3%,7.1E-73
C,3959648,3959648,1,1,,T -> C,,,,,127,SNP (transition),,,27.6%,1.6E-53
G,3959693,3959693,1,1,,C -> G,,,,,300,SNP (transversion),,,31.3%,6.5E-110
T,3959710,3959710,1,1,,C -> T,,,,,307,SNP (transition),,,28.3%,2.4E-140
G,3959721,3959721,1,1,,T -> G,,,,,302,SNP (transversion),,,36.1%,9.6E-211
A,3959746,3959746,1,1,,G -> A,,,,,308,SNP (transition),,,26.9%,4.1E-140
G,3972425,3972425,1,1,,T -> G,,,,,353,SNP (transversion),,,27.5%,9.4E-242
T,3972473,3972473,1,1,,C -> T,,,,,282,SNP (transition),,,29.8%,4.7E-213
C,4097444,4097443,0,1,,+C,,,,,373,Insertion,,,98.9%,0.0
C,4097480,4097480,1,1,,A -> C,,,,,296,SNP (transversion),,,99.3%,0.0
CC,4097482,4097481,0,1,,+CC,,,,,287 -> 290,Insertion,,,97.2% -> 97.6%,0.0
,4097486,4097486,1,1,,-A,,,,,271,Deletion,,,100.0%,0.0
C,4097490,4097490,1,1,,G -> C,,,,,266,SNP (transversion),,,100.0%,0.0
TCTACCA,4097492,4097498,7,1,,CGAGTGG -> TCTACCA,,,,,251 -> 261,Substitution,,,98.5% -> 99.2%,0.0
CT,4097500,4097501,2,1,,GG -> CT,,,,,246,Substitution,,,99.2%,0.0
A,4097688,4097688,1,1,,T -> A,,,,,126,SNP (transversion),,,96.0%,0.0
AC,4097689,4097690,2,1,,CA -> AC,,,,,127 -> 129,Substitution,,,75.6% -> 76.7%,1.5E-297
T,4097692,4097692,1,1,,A -> T,,,,,137,SNP (transversion),,,97.8%,0.0
G,4097695,4097695,1,1,,A -> G,,,,,157,SNP (transition),,,95.5%,0.0
G,4097699,4097698,0,1,,+G,,,,,168,Insertion,,,89.9%,0.0
CTT,4097700,4097702,3,1,,AGC -> CTT,,,,,178 -> 188,Substitution,,,99.4% -> 99.5%,0.0
C,4097705,4097705,1,1,,G -> C,,,,,191,SNP (transversion),,,99.5%,0.0
AGCCTG,4097711,4097710,0,1,,+AGCCTG,,,,,208 -> 219,Insertion,,,99.0% -> 99.1%,0.0
A,4178498,4178498,1,1,,G -> A,,,,,1337,SNP (transition),,,30.1%,0.0
C,4178501,4178501,1,1,,G -> C,,,,,1341,SNP (transversion),,,32.0%,0.0
A,4178540,4178540,1,1,,T -> A,,,,,1278,SNP (transversion),,,58.3%,0.0
T,4178548,4178548,1,1,,G -> T,,,,,1271,SNP (transversion),,,43.2%,0.0
C,4178549,4178548,0,1,,+C,,,,,1261,Insertion,,,38.5%,0.0
T,4178749,4178749,1,1,,G -> T,,,,,523,SNP (transversion),,,25.6%,1.6E-91
C,4179203,4179203,1,1,,G -> C,,,,,1033,SNP (transversion),,,42.0%,0.0
,4179206,4179206,1,1,,(A)3 -> (A)2,,,,,1054,Deletion (tandem repeat),,,38.3%,0.0
A,4179212,4179212,1,1,,T -> A,,,,,1075,SNP (transversion),,,54.9%,0.0
C,4179251,4179251,1,1,,G -> C,,,,,1146,SNP (transversion),,,33.7%,0.0
C,4179254,4179254,1,1,,T -> C,,,,,1139,SNP (transition),,,33.4%,0.0
T,4197429,4197429,1,1,,C -> T,,,,,202,SNP (transition),,,25.7%,8.3E-72
G,4197456,4197456,1,1,,C -> G,,,,,262,SNP (transversion),,,28.2%,7.3E-127
C,4197465,4197465,1,1,,A -> C,,,,,259,SNP (transversion),,,33.2%,9.6E-146
A,4197470,4197470,1,1,,G -> A,,,,,262,SNP (transition),,,32.4%,4.8E-143
CC,4197472,4197473,2,1,,AG -> CC,,,,,265,Substitution,,,32.1%,1.5E-142
T,4197477,4197477,1,1,,C -> T,,,,,270,SNP (transition),,,32.6%,3.1E-148
A,4197492,4197492,1,1,,T -> A,,,,,280,SNP (transversion),,,32.1%,3.6E-124
G,4197709,4197709,1,1,,A -> G,,,,,59,SNP (transition),,,32.2%,5.1E-35
C,4197713,4197713,1,1,,T -> C,,,,,63,SNP (transition),,,34.9%,1.9E-43
T,4197720,4197720,1,1,,G -> T,,,,,82,SNP (transversion),,,25.6%,5.8E-32
G,4197826,4197826,1,1,,C -> G,,,,,714,SNP (transversion),,,38.8%,0.0
C,4197829,4197829,1,1,,T -> C,,,,,823,SNP (transition),,,47.3%,0.0
A,4197835,4197835,1,1,,C -> A,,,,,911,SNP (transversion),,,34.7%,0.0
TG,4197839,4197838,0,1,,+TG,,,,,916,Insertion,,,33.2%,0.0
C,4197841,4197841,1,1,,T -> C,,,,,928,SNP (transition),,,26.8%,0.0
A,4197850,4197850,1,1,,G -> A,,,,,947,SNP (transition),,,25.8%,0.0
G,4197855,4197855,1,1,,A -> G,,,,,963,SNP (transition),,,25.3%,0.0
A,4197861,4197861,1,1,,T -> A,,,,,966,SNP (transversion),,,25.8%,0.0
G,4197866,4197866,1,1,,C -> G,,,,,983,SNP (transversion),,,26.3%,0.0
G,4211564,4211564,1,1,,A -> G,,,,,274,SNP (transition),,,41.2%,1.3E-305
T,4211567,4211567,1,1,,A -> T,,,,,276,SNP (transversion),,,33.0%,1.9E-235
TTGT,4211569,4211572,4,1,,CGCG -> TTGT,,,,,270 -> 286,Substitution,,,26.0% -> 31.1%,3.4E-193
T,4211574,4211574,1,1,,G -> T,,,,,287,SNP (transversion),,,26.1%,6.3E-193
C,4211580,4211580,1,1,,A -> C,,,,,287,SNP (transversion),,,35.2%,1.9E-244
T,4211590,4211590,1,1,,C -> T,,,,,294,SNP (transition),,,51.0%,0.0
A,4211602,4211602,1,1,,C -> A,,,,,264,SNP (transversion),,,51.5%,6.3E-290
G,4211671,4211671,1,1,,C -> G,,,,,292,SNP (transversion),,,26.7%,1.2E-193
A,4211680,4211680,1,1,,G -> A,,,,,274,SNP (transition),,,31.8%,8.8E-215
G,4211684,4211684,1,1,,A -> G,,,,,261,SNP (transition),,,29.9%,2.7E-190
T,4211687,4211687,1,1,,C -> T,,,,,261,SNP (transition),,,33.3%,5.4E-217
T,4211701,4211701,1,1,,G -> T,,,,,305,SNP (transversion),,,27.5%,2.1E-159
G,4211703,4211702,0,1,,+G,,,,,322,Insertion,,,40.1%,0.0
G,4211724,4211724,1,1,,T -> G,,,,,411,SNP (transversion),,,25.8%,1.2E-260
T,4211757,4211757,1,1,,C -> T,,,,,484,SNP (transition),,,35.5%,0.0
T,4211758,4211758,1,1,,C -> T,,,,,494,SNP (transition),,,27.7%,0.0
A,4211793,4211793,1,1,,C -> A,,,,,571,SNP (transversion),,,34.5%,0.0
C,4211798,4211798,1,1,,T -> C,,,,,563,SNP (transition),,,56.1%,0.0
G,4211802,4211802,1,1,,C -> G,,,,,553,SNP (transversion),,,39.6%,0.0
G,4260436,4260436,1,1,,A -> G,,,,,486,SNP (transition),,,34.2%,0.0
C,4260450,4260450,1,1,,T -> C,,,,,541,SNP (transition),,,39.4%,0.0
,4260453,4260453,1,1,,(T)4 -> (T)3,,,,,559,Deletion (tandem repeat),,,36.9%,5.7E-317
G,4325739,4325739,1,1,,C -> G,,,,,143,SNP (transversion),,,32.2%,1.4E-82
C,4325753,4325753,1,1,,T -> C,,,,,146,SNP (transition),,,30.1%,8.3E-56
T,4325756,4325756,1,1,,G -> T,,,,,147,SNP (transversion),,,40.8%,3.3E-73
G,4325776,4325776,1,1,,C -> G,,,,,164,SNP (transversion),,,31.7%,4.9E-129
A,4325779,4325779,1,1,,C -> A,,,,,163,SNP (transversion),,,27.0%,8.1E-106
A,4325856,4325856,1,1,,T -> A,,,,,100,SNP (transversion),,,25.0%,2.3E-9
T,4325877,4325877,1,1,,G -> T,,,,,78,SNP (transversion),,,97.4%,6.4E-81
A,4325965,4325965,1,1,,T -> A,,,,,52,SNP (transversion),,,26.9%,6.3E-14
C,4325965,4325965,1,1,,T -> C,,,,,52,SNP (transition),,,40.4%,2.3E-16
T,4325966,4325966,1,1,,G -> T,,,,,47,SNP (transversion),,,25.5%,1.1E-10
GG,4325969,4325970,2,1,,TT -> GG,,,,,33 -> 37,Substitution,,,27.0% -> 27.3%,1.7E-9
A,4325988,4325988,1,1,,T -> A,,,,,34,SNP (transversion),,,38.2%,2.7E-10
A,4325992,4325992,1,1,,G -> A,,,,,37,SNP (transition),,,27.0%,2.1E-9
C,4326025,4326024,0,1,,+C,,,,,43,Insertion,,,39.5%,7.1E-20
T,4326027,4326027,1,1,,C -> T,,,,,46,SNP (transition),,,43.5%,2.5E-18
A,4326030,4326030,1,1,,G -> A,,,,,44,SNP (transition),,,43.2%,3.1E-19
A,4326034,4326034,1,1,,G -> A,,,,,44,SNP (transition),,,34.1%,5.2E-18
CC,4326035,4326036,2,1,,TA -> CC,,,,,45 -> 47,Substitution,,,44.4% -> 46.8%,2.1E-27
C,4326038,4326038,1,1,,T -> C,,,,,51,SNP (transition),,,31.4%,2.3E-15
A,4326040,4326040,1,1,,G -> A,,,,,56,SNP (transition),,,28.6%,3.6E-16
A,4326041,4326041,1,1,,T -> A,,,,,56,SNP (transversion),,,32.1%,4.8E-19
T,4326043,4326043,1,1,,G -> T,,,,,60,SNP (transversion),,,31.7%,5.6E-11
T,4326061,4326061,1,1,,C -> T,,,,,84,SNP (transition),,,91.7%,5.1E-76
T,4326295,4326295,1,1,,C -> T,,,,,190,SNP (transition),,,61.6%,6.1E-193
A,4326354,4326354,1,1,,C -> A,,,,,86,SNP (transversion),,,31.4%,2.4E-22
G,4326361,4326361,1,1,,A -> G,,,,,85,SNP (transition),,,40.0%,1.8E-38
C,4326365,4326365,1,1,,A -> C,,,,,83,SNP (transversion),,,47.0%,3.4E-51
C,4326441,4326441,1,1,,T -> C,,,,,253,SNP (transition),,,51.0%,2.0E-184
A,4326473,4326473,1,1,,G -> A,,,,,289,SNP (transition),,,31.8%,3.1E-181
CA,4326655,4326656,2,1,,GG -> CA,,,,,388 -> 392,Substitution,,,28.1% -> 28.4%,9.5E-104
C,4326658,4326658,1,1,,T -> C,,,,,384,SNP (transition),,,27.1%,8.8E-104
C,4326690,4326690,1,1,,T -> C,,,,,301,SNP (transition),,,31.2%,1.6E-73
G,4326699,4326699,1,1,,A -> G,,,,,264,SNP (transition),,,32.2%,6.4E-68
C,4326840,4326840,1,1,,T -> C,,,,,30,SNP (transition),,,30.0%,6.9E-18
T,4326841,4326841,1,1,,C -> T,,,,,29,SNP (transition),,,27.6%,1.7E-16
AC,4326843,4326844,2,1,,CT -> AC,,,,,27 -> 28,Substitution,,,28.6% -> 29.6%,7.5E-16
G,4326846,4326846,1,1,,C -> G,,,,,30,SNP (transversion),,,26.7%,5.7E-18
G,4326848,4326848,1,1,,C -> G,,,,,30,SNP (transversion),,,26.7%,3.6E-17
G,4326850,4326850,1,1,,A -> G,,,,,31,SNP (transition),,,32.3%,4.3E-20
C,4326876,4326876,1,1,,T -> C,,,,,84,SNP (transition),,,26.2%,1.1E-18
A,4326965,4326965,1,1,,G -> A,,,,,215,SNP (transition),,,35.3%,2.1E-36
T,4327171,4327171,1,1,,C -> T,,,,,319,SNP (transition),,,67.1%,0.0
A,4327186,4327186,1,1,,G -> A,,,,,282,SNP (transition),,,49.6%,1.5E-225
T,4327394,4327394,1,1,,C -> T,,,,,163,SNP (transition),,,36.2%,1.2E-85
TA,4346656,4346657,2,1,,CG -> TA,,,,,240 -> 243,Substitution,,,34.2% -> 35.0%,5.6E-228
C,4346661,4346661,1,1,,G -> C,,,,,239,SNP (transversion),,,32.2%,2.9E-206
TG,4346664,4346665,2,1,,GA -> TG,,,,,237 -> 239,Substitution,,,28.5% -> 30.0%,5.2E-178
A,4346667,4346667,1,1,,G -> A,,,,,237,SNP (transition),,,28.3%,3.4E-175
T,4346669,4346669,1,1,,A -> T,,,,,238,SNP (transversion),,,27.7%,5.8E-172
G,4346671,4346671,1,1,,C -> G,,,,,237,SNP (transversion),,,27.0%,6.0E-166
,4382167,4382167,1,1,,-C,,,,,651,Deletion,,,50.5%,0.0
G,4382174,4382174,1,1,,A -> G,,,,,669,SNP (transition),,,53.4%,0.0
AAC,4382182,4382184,3,1,,TGT -> AAC,,,,,694 -> 700,Substitution,,,53.2% -> 54.0%,0.0
A,4382191,4382191,1,1,,C -> A,,,,,704,SNP (transversion),,,53.3%,0.0
A,4382195,4382195,1,1,,G -> A,,,,,709,SNP (transition),,,53.5%,0.0
T,4382216,4382216,1,1,,C -> T,,,,,640,SNP (transition),,,48.0%,0.0
C,4382220,4382220,1,1,,G -> C,,,,,637,SNP (transversion),,,47.7%,0.0
A,4382227,4382226,0,1,,(A)3 -> (A)4,,,,,616,Insertion (tandem repeat),,,45.0%,0.0
AG,4382239,4382240,2,1,,GA -> AG,,,,,595 -> 599,Substitution,,,42.4%,0.0
CT,4382254,4382255,2,1,,TC -> CT,,,,,558 -> 562,Substitution,,,40.0% -> 40.5%,0.0
C,4382262,4382262,1,1,,T -> C,,,,,526,SNP (transition),,,39.0%,0.0
G,4382276,4382276,1,1,,A -> G,,,,,508,SNP (transition),,,35.0%,0.0
CCC,4509804,4509806,3,1,,TGT -> CCC,,,,,113 -> 115,Substitution,,,75.7% -> 77.0%,1.4E-278
CAT,4509808,4509810,3,1,,TGG -> CAT,,,,,107 -> 115,Substitution,,,68.8% -> 73.0%,1.9E-227
T,4509812,4509812,1,1,,A -> T,,,,,103,SNP (transversion),,,68.0%,9.4E-212
AC,4509814,4509815,2,1,,GA -> AC,,,,,91,Substitution,,,62.6% -> 63.7%,3.5E-175
GTGCACACC,4509818,4509826,9,1,,TGAAGGGAG -> GTGCACACC,,,,,74 -> 91,Substitution,,,31.1% -> 56.0%,2.6E-62
G,4510966,4510966,1,1,,T -> G,,,,,38,SNP (transversion),,,31.6%,2.7E-33
G,4510968,4510968,1,1,,A -> G,,,,,44,SNP (transition),,,43.2%,5.6E-57
G,4510970,4510970,1,1,,C -> G,,,,,45,SNP (transversion),,,55.6%,3.2E-78
GGCTCG,4510973,4510978,6,1,,TAGAAT -> GGCTCG,,,,,48 -> 51,Substitution,,,60.0% -> 72.5%,4.7E-92
C,4521629,4521628,0,1,,+C,,,,,167,Insertion,,,99.4%,0.0
T,4533685,4533684,0,1,,+T,,,,,427,Insertion,,,99.8%,0.0
A,4533781,4533780,0,1,,(A)4 -> (A)5,,,,,405,Insertion (tandem repeat),,,99.8%,0.0
G,4533949,4533948,0,1,,(G)2 -> (G)3,,,,,464,Insertion (tandem repeat),,,98.7%,0.0
G,4534209,4534208,0,1,,(G)3 -> (G)4,,,,,412,Insertion (tandem repeat),,,100.0%,1.6E-165
T,4536064,4536064,1,1,,C -> T,,,,,5,SNP (transition),,,100.0%,1.0E-10
T,4536069,4536069,1,1,,C -> T,,,,,15,SNP (transition),,,26.7%,3.3E-7
C,4536596,4536595,0,1,,(C)5 -> (C)6,,,,,380,Insertion (tandem repeat),,,99.7%,3.8E-112
C,4536871,4536870,0,1,,(C)4 -> (C)5,,,,,410,Insertion (tandem repeat),,,99.8%,4.1E-121
A,4537165,4537164,0,1,,(A)3 -> (A)4,,,,,449,Insertion (tandem repeat),,,95.3%,1.4E-266
G,4537170,4537169,0,1,,+G,,,,,448,Insertion,,,96.7%,1.0E-277
CTT,4537305,4537304,0,1,,+CTT,,,,,453 -> 454,Insertion,,,92.3%,0.0
G,4537315,4537315,1,1,,T -> G,,,,,443,SNP (transversion),,,95.5%,0.0
TGCG,4537317,4537317,1,1,,C -> TGCG,,,,,429 -> 437,Insertion,,,94.2% -> 94.3%,0.0
T,4537322,4537321,0,1,,+T,,,,,417,Insertion,,,96.9%,0.0
AC,4537754,4537753,0,1,,+AC,,,,,328 -> 332,Insertion,,,99.4%,2.1E-94
T,4539051,4539050,0,1,,+T,,,,,716,Insertion,,,99.9%,4.3E-284
A,4539320,4539320,1,1,,G -> A,,,,,509,SNP (transition),,,97.2%,0.0
C,4539343,4539343,1,1,,T -> C,,,,,494,SNP (transition),,,99.8%,0.0
C,4539396,4539396,1,1,,T -> C,,,,,502,SNP (transition),,,94.8%,0.0
G,4539412,4539412,1,1,,T -> G,,,,,499,SNP (transversion),,,98.8%,0.0
,4539417,4539417,1,1,,-C,,,,,499,Deletion,,,100.0%,0.0
G,4539420,4539420,1,1,,A -> G,,,,,502,SNP (transition),,,93.6%,0.0
G,4561110,4561110,1,1,,T -> G,,,,,501,SNP (transversion),,,29.3%,0.0
A,4561116,4561116,1,1,,G -> A,,,,,510,SNP (transition),,,31.2%,0.0
T,4561133,4561133,1,1,,G -> T,,,,,554,SNP (transversion),,,58.3%,0.0
A,4561135,4561135,1,1,,G -> A,,,,,562,SNP (transition),,,56.9%,0.0
G,4889971,4889971,1,1,,A -> G,,,,,242,SNP (transition),,,27.3%,2.1E-171
T,4889977,4889977,1,1,,C -> T,,,,,250,SNP (transition),,,27.2%,4.4E-156
C,4889982,4889982,1,1,,T -> C,,,,,254,SNP (transition),,,29.1%,4.6E-187
G,4890004,4890004,1,1,,T -> G,,,,,260,SNP (transversion),,,36.5%,6.4E-251
G,4890100,4890100,1,1,,T -> G,,,,,313,SNP (transversion),,,50.5%,0.0
G,4890105,4890105,1,1,,A -> G,,,,,308,SNP (transition),,,48.7%,0.0
T,4993674,4993674,1,1,,G -> T,,,,,69,SNP (transversion),,,36.2%,7.7E-30
C,4993856,4993856,1,1,,G -> C,,,,,408,SNP (transversion),,,25.2%,1.2E-231
A,5002842,5002842,1,1,,G -> A,,,,,437,SNP (transition),,,48.7%,0.0
C,5002845,5002845,1,1,,T -> C,,,,,409,SNP (transition),,,54.5%,0.0
C,5002847,5002847,1,1,,T -> C,,,,,429,SNP (transition),,,40.6%,0.0
AA,5002933,5002933,1,1,,T -> AA,,,,,619 -> 624,Insertion,,,48.5% -> 48.9%,0.0
TT,5062807,5062808,2,1,,GG -> TT,,,,,72 -> 73,Substitution,,,100.0%,1.6E-245
AAATGCGA,5062811,5062818,8,1,,TCGCATTT -> AAATGCGA,,,,,71 -> 79,Substitution,,,100.0%,3.2E-256
G,5170874,5170874,1,1,,C -> G,,,,,146,SNP (transversion),,,34.2%,3.7E-121
,5170879,5170879,1,1,,(C)6 -> (C)5,,,,,154,Deletion (tandem repeat),,,31.8%,1.9E-92
AA,5279175,5279176,2,1,,GT -> AA,,,,,3 -> 7,Substitution,,,66.7% -> 85.7%,1.2E-7
CTC,5279179,5279181,3,1,,TCG -> CTC,,,,,11 -> 13,Substitution,,,90.9% -> 92.3%,1.1E-36
CCAC,5279183,5279186,4,1,,TGCG -> CCAC,,,,,18 -> 21,Substitution,,,94.4% -> 95.2%,1.1E-60
CC,5279188,5279189,2,1,,GG -> CC,,,,,26 -> 27,Substitution,,,96.2% -> 96.3%,8.2E-92
T,5279191,5279191,1,1,,G -> T,,,,,31,SNP (transversion),,,96.8%,3.1E-107
TCTAATCCC,5279193,5279201,9,1,,GTCGGCGAA -> TCTAATCCC,,,,,34 -> 60,Substitution,,,94.1% -> 98.3%,5.4E-118
T,5279204,5279204,1,1,,G -> T,,,,,72,SNP (transversion),,,100.0%,6.3E-260
C,5279206,5279206,1,1,,G -> C,,,,,77,SNP (transversion),,,100.0%,6.3E-278
GAGTTCT,5279209,5279215,7,1,,TGCAAAC -> GAGTTCT,,,,,78 -> 97,Substitution,,,98.7% -> 99.0%,1.6E-281
GA,5279217,5279218,2,1,,TT -> GA,,,,,104 -> 105,Substitution,,,100.0%,0.0
GC,5279220,5279221,2,1,,CT -> GC,,,,,107,Substitution,,,100.0%,0.0
C,5363445,5363445,1,1,,G -> C,,,,,435,SNP (transversion),,,25.3%,3.8E-138
A,5363990,5363990,1,1,,G -> A,,,,,106,SNP (transition),,,33.0%,4.0E-95
T,5363992,5363992,1,1,,G -> T,,,,,98,SNP (transversion),,,38.8%,2.1E-106
T,5364012,5364012,1,1,,G -> T,,,,,101,SNP (transversion),,,72.3%,8.6E-217
GT,5483354,5483355,2,1,,TG -> GT,,,,,553 -> 556,Substitution,,,99.3%,1.5E-323
CCA,5483357,5483356,0,1,,+CCA,,,,,552 -> 554,Insertion,,,99.6%,0.0
,5483453,5483453,1,1,,(A)3 -> (A)2,,,,,393,Deletion (tandem repeat),,,100.0%,1.3E-118
C,5483641,5483640,0,1,,+C,,,,,456,Insertion,,,100.0%,1.6E-137
G,5483645,5483644,0,1,,(G)3 -> (G)4,,,,,448,Insertion (tandem repeat),,,100.0%,4.0E-135
G,5483756,5483755,0,1,,+G,,,,,411,Insertion,,,99.5%,4.2E-119
T,5485471,5485470,0,1,,(T)3 -> (T)4,,,,,431,Insertion (tandem repeat),,,100.0%,4.0E-173
T,5485650,5485649,0,1,,+T,,,,,323,Insertion,,,99.7%,4.1E-95
C,5486035,5486034,0,1,,(C)5 -> (C)6,,,,,379,Insertion (tandem repeat),,,100.0%,2.0E-114
C,5486405,5486404,0,1,,+C,,,,,500,Insertion,,,99.4%,7.2E-193
A,5486498,5486497,0,1,,+A,,,,,685,Insertion,,,99.6%,1.8E-266
T,5486619,5486619,1,1,,A -> T,,,,,481,SNP (transversion),,,94.4%,6.9E-322
T,5486666,5486665,0,1,,(T)2 -> (T)3,,,,,389,Insertion (tandem repeat),,,98.7%,0.0
C,5486719,5486718,0,1,,+C,,,,,392,Insertion,,,99.7%,0.0
CA,5486741,5486742,2,1,,TC -> CA,,,,,412 -> 418,Substitution,,,99.3%,0.0
,5486744,5486745,2,1,,(CT)3 -> (CT)2,,,,,406,Deletion (tandem repeat),,,100.0%,0.0
,5486747,5486753,7,1,,-GTCGCAC,,,,,407,Deletion,,,100.0%,0.0
T,5486855,5486855,1,1,,A -> T,,,,,729,SNP (transversion),,,31.0%,1.4E-91
T,5486857,5486856,0,1,,+T,,,,,730,Insertion,,,26.0%,2.0E-79
C,5487003,5487002,0,1,,+C,,,,,689,Insertion,,,99.9%,2.6E-273
C,5487196,5487195,0,1,,+C,,,,,452,Insertion,,,99.8%,1.1E-133
G,5487250,5487249,0,1,,(G)2 -> (G)3,,,,,463,Insertion (tandem repeat),,,99.8%,5.8E-137
G,5487339,5487338,0,1,,+G,,,,,391,Insertion,,,100.0%,5.0E-118
A,5488677,5488677,1,1,,G -> A,,,,,680,SNP (transition),,,41.2%,1.0E-227
C,5488691,5488691,1,1,,T -> C,,,,,649,SNP (transition),,,44.8%,6.6E-278
A,5488699,5488699,1,1,,G -> A,,,,,640,SNP (transition),,,48.1%,0.0
A,5488702,5488702,1,1,,T -> A,,,,,641,SNP (transversion),,,48.5%,0.0
A,5545448,5545448,1,1,,T -> A,,,,,321,SNP (transversion),,,25.2%,1.3E-190
A,5545451,5545451,1,1,,T -> A,,,,,335,SNP (transversion),,,28.1%,1.5E-216
A,5880744,5880744,1,1,,T -> A,,,,,648,SNP (transversion),,,97.2%,0.0
T,5883934,5883934,1,1,,A -> T,,,,,232,SNP (transversion),,,29.7%,8.2E-8
TGTT,6013607,6013610,4,1,,GAAA -> TGTT,,,,,398 -> 401,Substitution,,,24.7% -> 26.3%,1.3E-260
TAA,6013613,6013615,3,1,,CGT -> TAA,,,,,400 -> 403,Substitution,,,27.0% -> 28.5%,6.4E-280
CT,6013620,6013621,2,1,,TG -> CT,,,,,411 -> 413,Substitution,,,30.4% -> 31.2%,0.0
C,6013625,6013625,1,1,,A -> C,,,,,422,SNP (transversion),,,35.5%,0.0
TAA,6013628,6013630,3,1,,ATG -> TAA,,,,,433 -> 438,Substitution,,,37.0% -> 38.8%,0.0
T,6013638,6013638,1,1,,C -> T,,,,,448,SNP (transition),,,44.9%,0.0
TT,6013678,6013679,2,1,,GG -> TT,,,,,468 -> 471,Substitution,,,27.1% -> 27.8%,4.0E-318
TT,6013681,6013682,2,1,,GC -> TT,,,,,462 -> 465,Substitution,,,25.8% -> 26.9%,4.3E-286
A,6013684,6013684,1,1,,T -> A,,,,,464,SNP (transversion),,,25.0%,8.0E-295
T,6319454,6319453,0,1,,+T,,,,,294,Insertion,,,99.7%,0.0
TG,6998205,6998205,1,1,,C -> TG,,,,,387 -> 389,Insertion,,,26.2% -> 26.4%,1.0E-251
A,6998219,6998219,1,1,,G -> A,,,,,444,SNP (transition),,,27.3%,1.1E-312
AA,6998229,6998230,2,1,,TG -> AA,,,,,490 -> 496,Substitution,,,42.9% -> 43.1%,0.0
C,6998232,6998232,1,1,,A -> C,,,,,503,SNP (transversion),,,43.1%,0.0
C,6998234,6998234,1,1,,T -> C,,,,,508,SNP (transition),,,43.3%,0.0
A,6998236,6998236,1,1,,G -> A,,,,,528,SNP (transition),,,44.3%,0.0
T,6998328,6998328,1,1,,G -> T,,,,,625,SNP (transversion),,,31.4%,0.0
C,6998330,6998329,0,1,,+C,,,,,608,Insertion,,,28.9%,0.0
CG,6998334,6998335,2,1,,GC -> CG,,,,,596 -> 597,Substitution,,,29.4% -> 29.8%,0.0
G,6998337,6998337,1,1,,A -> G,,,,,589,SNP (transition),,,29.4%,0.0
T,7269432,7269432,1,1,,C -> T,,,,,484,SNP (transition),,,100.0%,0.0