P. umsongensis GO16 ttdR KO ALE_Octanoate Whole-Genome Sequencing raw data

Selected Cell

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C	4326690	4326690	1	1	T -> C	75	SNP (transition)	33.3%	1.6E-21
G	4326699	4326699	1	1	A -> G	67	SNP (transition)	31.3%	1.1E-19
T	4327171	4327171	1	1	C -> T	118	SNP (transition)	70.3%	2.3E-153
A	4327186	4327186	1	1	G -> A	120	SNP (transition)	55.0%	8.7E-105
	4382167	4382167	1	1	-C	627	Deletion	49.0%	0.0
G	4382174	4382174	1	1	A -> G	641	SNP (transition)	51.5%	0.0
AAC	4382182	4382184	3	1	TGT -> AAC	664 -> 670	Substitution	48.3% -> 49.0%	0.0
A	4382191	4382191	1	1	C -> A	663	SNP (transversion)	48.3%	0.0
A	4382195	4382195	1	1	G -> A	653	SNP (transition)	48.7%	0.0
T	4382216	4382216	1	1	C -> T	600	SNP (transition)	44.5%	0.0
C	4382220	4382220	1	1	G -> C	589	SNP (transversion)	42.4%	0.0
A	4382227	4382226	0	1	(A)3 -> (A)4	568	Insertion (tandem repeat)	38.6%	0.0
AG	4382239	4382240	2	1	GA -> AG	544	Substitution	36.8%	0.0
CT	4382254	4382255	2	1	TC -> CT	519 -> 521	Substitution	32.6% -> 32.8%	0.0
C	4382262	4382262	1	1	T -> C	513	SNP (transition)	30.4%	0.0
G	4382276	4382276	1	1	A -> G	492	SNP (transition)	26.8%	0.0
CCC	4509804	4509806	3	1	TGT -> CCC	63 -> 66	Substitution	82.5% -> 84.8%	1.5E-160
CAT	4509808	4509810	3	1	TGG -> CAT	59 -> 61	Substitution	78.0% -> 80.3%	6.4E-140
T	4509812	4509812	1	1	A -> T	61	SNP (transversion)	73.8%	6.4E-135
AC	4509814	4509815	2	1	GA -> AC	56 -> 57	Substitution	66.1% -> 68.4%	1.3E-115
GTGCACACC	4509818	4509826	9	1	TGAAGGGAG -> GTGCACACC	48 -> 54	Substitution	43.8% -> 57.4%	2.7E-64
TCC	4509828	4509830	3	1	AGG -> TCC	42 -> 43	Substitution	38.1% -> 39.5%	6.6E-47
TT	4509832	4509833	2	1	GG -> TT	41 -> 43	Substitution	36.6% -> 39.5%	2.0E-36
TG	4509835	4509836	2	1	AC -> TG	39 -> 40	Substitution	25.6% -> 30.0%	6.3E-27
A	4510956	4510956	1	1	G -> A	17	SNP (transition)	29.4%	6.2E-14
C	4510958	4510958	1	1	G -> C	16	SNP (transversion)	31.3%	1.4E-15
CC	4510960	4510961	2	1	TT -> CC	16 -> 17	Substitution	43.8% -> 47.1%	1.4E-22
TT	4510963	4510964	2	1	CC -> TT	19 -> 20	Substitution	55.0% -> 57.9%	8.4E-32
G	4510966	4510966	1	1	T -> G	19	SNP (transversion)	57.9%	1.5E-36
G	4510968	4510968	1	1	A -> G	23	SNP (transition)	65.2%	1.5E-50
G	4510970	4510970	1	1	C -> G	25	SNP (transversion)	68.0%	1.4E-57
GGCTCG	4510973	4510978	6	1	TAGAAT -> GGCTCG	29 -> 32	Substitution	75.9% -> 84.4%	9.8E-74
C	4521629	4521628	0	1	+C	117	Insertion	98.3%	0.0
T	4533685	4533684	0	1	+T	381	Insertion	99.5%	0.0
A	4533781	4533780	0	1	(A)4 -> (A)5	399	Insertion (tandem repeat)	99.5%	0.0
G	4533949	4533948	0	1	(G)2 -> (G)3	558	Insertion (tandem repeat)	97.3%	0.0
G	4534209	4534208	0	1	(G)3 -> (G)4	463	Insertion (tandem repeat)	100.0%	6.3E-186
C	4536062	4536062	1	1	T -> C	4	SNP (transition)	100.0%	6.3E-12
T	4536064	4536064	1	1	C -> T	5	SNP (transition)	60.0%	7.9E-11
G	4536073	4536072	0	1	+G	30	Insertion	90.0%	1.5E-8
C	4536596	4536595	0	1	(C)5 -> (C)6	506	Insertion (tandem repeat)	99.8%	8.0E-150
C	4536871	4536870	0	1	(C)4 -> (C)5	670	Insertion (tandem repeat)	100.0%	1.0E-201
A	4537165	4537164	0	1	(A)3 -> (A)4	793	Insertion (tandem repeat)	95.5%	0.0
G	4537170	4537169	0	1	+G	790	Insertion	98.1%	0.0
CT	4537305	4537304	0	1	+CT	754 -> 761	Insertion	87.8% -> 88.2%	0.0
T	4537305	4537304	0	1	(T)3 -> (T)4	752	Insertion (tandem repeat)	98.7%	0.0
G	4537315	4537315	1	1	T -> G	697	SNP (transversion)	93.0%	0.0
TGCG	4537317	4537317	1	1	C -> TGCG	668 -> 689	Insertion	91.7% -> 92.9%	0.0
T	4537322	4537321	0	1	+T	630	Insertion	95.9%	0.0
AC	4537754	4537753	0	1	+AC	492 -> 496	Insertion	99.0%	5.2E-46
T	4539051	4539050	0	1	+T	833	Insertion	100.0%	0.0
A	4539320	4539320	1	1	G -> A	547	SNP (transition)	97.3%	0.0
C	4539343	4539343	1	1	T -> C	579	SNP (transition)	99.3%	0.0
C	4539396	4539396	1	1	T -> C	496	SNP (transition)	97.6%	0.0
G	4539412	4539412	1	1	T -> G	491	SNP (transversion)	99.0%	0.0
	4539417	4539417	1	1	-C	485	Deletion	100.0%	0.0
G	4539420	4539420	1	1	A -> G	497	SNP (transition)	97.4%	0.0
G	4561110	4561110	1	1	T -> G	462	SNP (transversion)	26.6%	2.2E-316
A	4561116	4561116	1	1	G -> A	473	SNP (transition)	29.2%	0.0
T	4561133	4561133	1	1	G -> T	470	SNP (transversion)	63.0%	0.0
A	4561135	4561135	1	1	G -> A	470	SNP (transition)	61.7%	0.0
T	4889977	4889977	1	1	C -> T	271	SNP (transition)	25.8%	8.4E-159
C	4889982	4889982	1	1	T -> C	273	SNP (transition)	27.1%	9.7E-192
G	4890004	4890004	1	1	T -> G	302	SNP (transversion)	38.4%	1.0E-320
G	4890100	4890100	1	1	T -> G	385	SNP (transversion)	39.5%	0.0
G	4890105	4890105	1	1	A -> G	383	SNP (transition)	38.1%	0.0
A	5002842	5002842	1	1	G -> A	405	SNP (transition)	47.9%	0.0
C	5002845	5002845	1	1	T -> C	393	SNP (transition)	53.7%	0.0
C	5002847	5002847	1	1	T -> C	401	SNP (transition)	38.7%	0.0
AA	5002933	5002933	1	1	T -> AA	684 -> 695	Insertion	43.7% -> 44.2%	0.0
TT	5062807	5062808	2	1	GG -> TT	82 -> 84	Substitution	92.7% -> 92.9%	4.1E-265
AAATGCGA	5062811	5062818	8	1	TCGCATTT -> AAATGCGA	84 -> 96	Substitution	97.6% -> 97.9%	2.3E-279
AA	5085721	5085722	2	1	GT -> AA	546 -> 560	Substitution	25.1% -> 26.1%	4.6E-307
G	5170874	5170874	1	1	C -> G	104	SNP (transversion)	31.7%	6.6E-76
	5170879	5170879	1	1	(C)6 -> (C)5	101	Deletion (tandem repeat)	31.7%	1.1E-57
C	5170886	5170886	1	1	T -> C	87	SNP (transition)	34.5%	1.9E-79
T	5170891	5170891	1	1	G -> T	88	SNP (transversion)	28.4%	5.9E-69
T	5170893	5170893	1	1	C -> T	89	SNP (transition)	25.8%	1.8E-62
TCCC	5279198	5279201	4	1	CGAA -> TCCC	32	Substitution	25.0% -> 31.3%	2.6E-23
T	5279204	5279204	1	1	G -> T	41	SNP (transversion)	26.8%	6.3E-32
T	5279205	5279205	1	1	C -> T	46	SNP (transition)	30.4%	3.8E-41
C	5279206	5279206	1	1	G -> C	45	SNP (transversion)	55.6%	3.2E-78
C	5279209	5279209	1	1	T -> C	49	SNP (transition)	40.8%	2.8E-61
AG	5279211	5279212	2	1	CA -> AG	51	Substitution	43.1%	2.4E-61
T	5279213	5279213	1	1	A -> T	52	SNP (transversion)	65.4%	1.1E-102
T	5279214	5279214	1	1	A -> T	56	SNP (transversion)	48.2%	1.2E-76
TCGA	5279216	5279219	4	1	CTTC -> TCGA	59 -> 65	Substitution	51.7% -> 56.9%	1.7E-92
GCTG	5279221	5279224	4	1	TTGC -> GCTG	68 -> 74	Substitution	61.8% -> 64.9%	2.7E-133
A	5363990	5363990	1	1	G -> A	47	SNP (transition)	29.8%	1.3E-39
T	5363992	5363992	1	1	G -> T	47	SNP (transversion)	38.3%	4.5E-51
T	5364012	5364012	1	1	G -> T	53	SNP (transversion)	52.8%	3.6E-78
GT	5483354	5483355	2	1	TG -> GT	751 -> 756	Substitution	99.5%	0.0
CCA	5483357	5483356	0	1	+CCA	756 -> 761	Insertion	99.6%	0.0
	5483453	5483453	1	1	(A)3 -> (A)2	531	Deletion (tandem repeat)	100.0%	6.3E-107
C	5483641	5483640	0	1	+C	509	Insertion	99.8%	1.0E-150
G	5483645	5483644	0	1	(G)3 -> (G)4	509	Insertion (tandem repeat)	100.0%	2.0E-153
G	5483756	5483755	0	1	+G	410	Insertion	100.0%	1.0E-123
T	5485471	5485470	0	1	(T)3 -> (T)4	491	Insertion (tandem repeat)	99.6%	1.1E-191
T	5485650	5485649	0	1	+T	399	Insertion	99.7%	7.9E-118
C	5486035	5486034	0	1	(C)5 -> (C)6	505	Insertion (tandem repeat)	99.4%	6.7E-145
C	5486405	5486404	0	1	+C	791	Insertion	99.9%	4.0E-235
A	5486498	5486497	0	1	+A	1169	Insertion	99.9%	0.0
T	5486619	5486619	1	1	A -> T	877	SNP (transversion)	94.3%	0.0
T	5486666	5486665	0	1	(T)2 -> (T)3	628	Insertion (tandem repeat)	97.8%	0.0
C	5486719	5486718	0	1	+C	639	Insertion	100.0%	0.0
CA	5486741	5486742	2	1	TC -> CA	616 -> 617	Substitution	96.8%	0.0
A	5486744	5486753	10	1	CTAGTCGCAC -> A	559 -> 587	Deletion	100.0%	0.0
T	5486855	5486855	1	1	A -> T	991	SNP (transversion)	29.2%	4.3E-109
C	5487003	5487002	0	1	+C	1014	Insertion	100.0%	0.0
C	5487196	5487195	0	1	+C	156	Insertion	99.4%	2.5E-45
TG	5487237	5487238	2	1	CC -> TG	4	Substitution	100.0%	6.3E-12
TC	5487240	5487241	2	1	GG -> TC	4	Substitution	50.0%	2.4E-7
G	5487242	5487242	1	1	C -> G	4	SNP (transversion)	100.0%	6.3E-12
C	5487245	5487245	1	1	T -> C	7	SNP (transition)	28.6%	8.4E-7
G	5487247	5487247	1	1	A -> G	11	SNP (transition)	100.0%	6.3E-14
G	5487339	5487338	0	1	+G	256	Insertion	98.8%	4.4E-71
A	5488677	5488677	1	1	G -> A	735	SNP (transition)	39.3%	5.9E-174
C	5488691	5488691	1	1	T -> C	733	SNP (transition)	43.4%	6.8E-237
A	5488699	5488699	1	1	G -> A	729	SNP (transition)	44.3%	3.9E-306
A	5488702	5488702	1	1	T -> A	724	SNP (transversion)	44.6%	2.4E-307
A	5545451	5545451	1	1	T -> A	434	SNP (transversion)	27.0%	1.0E-266
A	5880744	5880744	1	1	T -> A	589	SNP (transversion)	68.6%	2.3E-217
T	5883934	5883934	1	1	A -> T	378	SNP (transversion)	31.7%	4.2E-8
T	6013610	6013610	1	1	A -> T	549	SNP (transversion)	26.0%	0.0
TAA	6013613	6013615	3	1	CGT -> TAA	550 -> 557	Substitution	27.3% -> 28.7%	0.0
CT	6013620	6013621	2	1	TG -> CT	565	Substitution	29.6% -> 30.1%	0.0
C	6013625	6013625	1	1	A -> C	573	SNP (transversion)	33.0%	0.0
TAA	6013628	6013630	3	1	ATG -> TAA	568 -> 578	Substitution	34.3% -> 36.0%	0.0
T	6013638	6013638	1	1	C -> T	603	SNP (transition)	40.8%	0.0
TT	6013678	6013679	2	1	GG -> TT	594 -> 600	Substitution	31.5% -> 32.5%	0.0
TT	6013681	6013682	2	1	GC -> TT	589 -> 595	Substitution	30.6% -> 31.1%	0.0
AT	6013684	6013685	2	1	TG -> AT	593 -> 598	Substitution	29.0% -> 29.9%	0.0
G	6013688	6013688	1	1	T -> G	599	SNP (transversion)	26.5%	0.0
G	6319459	6319458	0	1	+G	258	Insertion	99.6%	0.0
C	6998228	6998228	1	1	T -> C	537	SNP (transition)	25.5%	0.0
AA	6998229	6998230	2	1	TG -> AA	540 -> 546	Substitution	43.1% -> 43.6%	0.0
G	6998231	6998231	1	1	A -> G	558	SNP (transition)	27.2%	0.0
C	6998232	6998232	1	1	A -> C	572	SNP (transversion)	44.1%	0.0
C	6998234	6998234	1	1	T -> C	579	SNP (transition)	43.9%	0.0
G	6998235	6998235	1	1	T -> G	586	SNP (transversion)	27.6%	0.0
A	6998236	6998236	1	1	G -> A	593	SNP (transition)	44.0%	0.0
T	6998328	6998328	1	1	G -> T	801	SNP (transversion)	30.3%	0.0
C	6998330	6998329	0	1	+C	785	Insertion	28.3%	0.0
CG	6998334	6998335	2	1	GC -> CG	754 -> 760	Substitution	28.4% -> 28.7%	0.0
G	6998337	6998337	1	1	A -> G	758	SNP (transition)	28.1%	0.0
T	7269432	7269432	1	1	C -> T	455	SNP (transition)	100.0%	0.0