P. umsongensis GO16 ttdR KO ALE_Octanoate Whole-Genome Sequencing raw data

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A	2215239	2215239	1	1		G -> A					61	SNP (transition)			42.6%	3.4E-18
G	2215266	2215266	1	1		T -> G					66	SNP (transversion)			45.5%	5.1E-60
	2215277	2215277	1	1		(G)5 -> (G)4					59	Deletion (tandem repeat)			42.4%	5.0E-27
C	2215281	2215281	1	1		A -> C					59	SNP (transversion)			55.9%	8.5E-57
G	2215285	2215285	1	1		A -> G					59	SNP (transition)			33.9%	2.6E-41
C	2215309	2215309	1	1		T -> C					51	SNP (transition)			27.5%	1.0E-12
T	2215311	2215311	1	1		G -> T					49	SNP (transversion)			36.7%	1.6E-18
C	2215313	2215313	1	1		A -> C					50	SNP (transversion)			28.0%	1.5E-15
A	2215316	2215316	1	1		G -> A					51	SNP (transition)			33.3%	1.7E-13
C	2215367	2215367	1	1		G -> C					55	SNP (transversion)			30.9%	8.0E-33
T	2215429	2215429	1	1		A -> T					41	SNP (transversion)			87.8%	9.3E-42
G	2215495	2215495	1	1		T -> G					19	SNP (transversion)			100.0%	1.0E-19
G	2215520	2215520	1	1		T -> G					27	SNP (transversion)			70.4%	1.6E-30
A	2215524	2215524	1	1		C -> A					29	SNP (transversion)			75.9%	2.3E-36
G	2215702	2215702	1	1		A -> G					87	SNP (transition)			29.9%	9.7E-57
A	2215712	2215712	1	1		G -> A					87	SNP (transition)			33.3%	5.9E-59
GG	2215728	2215729	2	1		AA -> GG					75 -> 80	Substitution			43.8% -> 45.3%	1.7E-46
A	2215754	2215754	1	1		G -> A					71	SNP (transition)			36.6%	1.2E-18
G	2215786	2215786	1	1		A -> G					55	SNP (transition)			25.5%	2.3E-8
T	2223590	2223590	1	1		A -> T					37	SNP (transversion)			40.5%	2.8E-31
G	2223591	2223591	1	1		A -> G					40	SNP (transition)			45.0%	1.8E-45
T	2223788	2223788	1	1		G -> T					64	SNP (transversion)			26.6%	7.8E-30
A	2223792	2223792	1	1		G -> A					66	SNP (transition)			28.8%	7.9E-36
TC	2223802	2223803	2	1		CA -> TC					64 -> 65	Substitution			35.4% -> 35.9%	4.1E-41
A	2223817	2223817	1	1		G -> A					60	SNP (transition)			38.3%	1.3E-39
G	2223823	2223823	1	1		C -> G					60	SNP (transversion)			41.7%	4.8E-49
C	2223832	2223832	1	1		G -> C					60	SNP (transversion)			38.3%	3.4E-44
T	2223843	2223843	1	1		A -> T					59	SNP (transversion)			40.7%	1.2E-39
C	2223852	2223852	1	1		T -> C					65	SNP (transition)			35.4%	3.3E-43
G	2223883	2223883	1	1		A -> G					74	SNP (transition)			32.4%	6.2E-44
T	2224041	2224041	1	1		C -> T					64	SNP (transition)			26.6%	3.1E-7
A	2224054	2224054	1	1		G -> A					56	SNP (transition)			37.5%	1.2E-13
A	2224065	2224065	1	1		T -> A					45	SNP (transversion)			88.9%	9.5E-47
GG	2224084	2224084	1	1		A -> GG					60 -> 61	Insertion			91.8% -> 93.3%	5.7E-106
A	2236989	2236989	1	1		G -> A					51	SNP (transition)			27.5%	9.1E-17
A	2237077	2237077	1	1		G -> A					92	SNP (transition)			41.3%	1.0E-107
	2237225	2237228	4	1		-CAAT					56 -> 62	Deletion			41.9% -> 46.4%	4.8E-51
C	2237263	2237263	1	1		A -> C					66	SNP (transversion)			60.6%	1.6E-102
G	2237281	2237281	1	1		C -> G					54	SNP (transversion)			61.1%	1.0E-81
A	2237331	2237331	1	1		G -> A					42	SNP (transition)			52.4%	1.3E-50
T	2237378	2237378	1	1		G -> T					34	SNP (transversion)			29.4%	1.2E-16
GTCCT	2237387	2237391	5	1		AGGAC -> GTCCT					24 -> 28	Substitution			28.6% -> 37.5%	7.5E-16
A	2237463	2237463	1	1		C -> A					43	SNP (transversion)			44.2%	1.2E-17
T	2237476	2237476	1	1		G -> T					50	SNP (transversion)			40.0%	2.7E-21
A	2237478	2237478	1	1		C -> A					50	SNP (transversion)			42.0%	7.7E-23
T	2237492	2237492	1	1		G -> T					57	SNP (transversion)			42.1%	1.3E-23
G	2237494	2237494	1	1		T -> G					58	SNP (transversion)			37.9%	8.2E-25
G	2237508	2237508	1	1		A -> G					67	SNP (transition)			44.8%	7.0E-42
A	2237518	2237518	1	1		G -> A					79	SNP (transition)			27.8%	1.1E-25
C	2237533	2237533	1	1		G -> C					76	SNP (transversion)			31.6%	2.2E-22
G	2237591	2237591	1	1		A -> G					76	SNP (transition)			48.7%	9.1E-68
A	2237602	2237602	1	1		C -> A					84	SNP (transversion)			72.6%	1.4E-114
A	2237621	2237621	1	1		G -> A					90	SNP (transition)			65.6%	9.6E-95
T	2237624	2237624	1	1		G -> T					89	SNP (transversion)			34.8%	5.5E-33
G	2237632	2237632	1	1		A -> G					94	SNP (transition)			60.6%	6.2E-83
G	2237633	2237633	1	1		A -> G					94	SNP (transition)			25.5%	7.5E-27
T	2237633	2237633	1	1		A -> T					94	SNP (transversion)			36.2%	1.1E-36
T	2237635	2237635	1	1		C -> T					94	SNP (transition)			37.2%	3.0E-38
C	2237663	2237663	1	1		T -> C					91	SNP (transition)			64.8%	4.8E-106
G	2237739	2237739	1	1		A -> G					52	SNP (transition)			53.8%	4.0E-56
T	2237763	2237763	1	1		G -> T					39	SNP (transversion)			38.5%	7.7E-34
A	2237787	2237787	1	1		G -> A					18	SNP (transition)			33.3%	6.5E-8
G	2237905	2237905	1	1		A -> G					24	SNP (transition)			37.5%	3.7E-9
G	2238301	2238301	1	1		A -> G					56	SNP (transition)			26.8%	7.2E-8
T	2312613	2312613	1	1		G -> T					120	SNP (transversion)			28.3%	3.9E-49
G	2312632	2312632	1	1		A -> G					122	SNP (transition)			27.0%	1.7E-53
T	2312658	2312658	1	1		A -> T					122	SNP (transversion)			86.9%	6.4E-278
T	2312663	2312663	1	1		G -> T					123	SNP (transversion)			91.1%	2.3E-254
TT	2312672	2312673	2	1		CC -> TT					134	Substitution			70.9%	8.1E-195
A	2312678	2312678	1	1		G -> A					136	SNP (transition)			70.6%	1.5E-196
T	2312736	2312736	1	1		G -> T					129	SNP (transversion)			34.9%	3.1E-78
G	2312761	2312761	1	1		T -> G					93	SNP (transversion)			37.6%	4.5E-80
G	2312773	2312773	1	1		A -> G					92	SNP (transition)			35.9%	1.9E-71
T	2312782	2312782	1	1		C -> T					87	SNP (transition)			25.3%	8.0E-40
	2312787	2312787	1	1		-A					88	Deletion			25.0%	3.7E-33
C	2496475	2496475	1	1		T -> C					75	SNP (transition)			57.3%	7.6E-113
A	2496483	2496483	1	1		G -> A					77	SNP (transition)			42.9%	9.9E-98
T	2496485	2496485	1	1		C -> T					77	SNP (transition)			50.6%	1.3E-95
A	2496489	2496489	1	1		G -> A					76	SNP (transition)			40.8%	1.5E-75
T	2496504	2496504	1	1		C -> T					75	SNP (transition)			54.7%	1.1E-73
A	2496512	2496512	1	1		G -> A					75	SNP (transition)			36.0%	5.0E-48
A	2496603	2496603	1	1		G -> A					71	SNP (transition)			39.4%	1.7E-34
G	2498268	2498268	1	1		A -> G					87	SNP (transition)			28.7%	1.7E-24
A	2513077	2513077	1	1		G -> A					90	SNP (transition)			27.8%	3.2E-46
G	2513208	2513208	1	1		A -> G					36	SNP (transition)			25.0%	3.5E-16
ATG	2513234	2513236	3	1		GAA -> ATG					31	Substitution			32.3%	3.5E-12
G	2513240	2513240	1	1		C -> G					31	SNP (transversion)			32.3%	4.2E-19
GT	2513242	2513243	2	1		AC -> GT					29 -> 30	Substitution			31.0% -> 33.3%	1.4E-13
T	2513501	2513501	1	1		C -> T					55	SNP (transition)			27.3%	1.1E-10
G	2513534	2513534	1	1		T -> G					41	SNP (transversion)			29.3%	4.2E-8
G	2596983	2596983	1	1		A -> G					183	SNP (transition)			27.9%	9.0E-98
A	2596988	2596988	1	1		T -> A					187	SNP (transversion)			26.2%	2.3E-97
T	2596992	2596992	1	1		C -> T					187	SNP (transition)			25.7%	1.0E-99
C	2596994	2596994	1	1		T -> C					185	SNP (transition)			26.5%	1.6E-102
C	2597009	2597009	1	1		T -> C					194	SNP (transition)			32.0%	7.7E-123
G	2597041	2597041	1	1		C -> G					189	SNP (transversion)			27.5%	1.7E-104
A	2597051	2597051	1	1		T -> A					194	SNP (transversion)			34.0%	1.2E-119
AC	2597056	2597057	2	1		GT -> AC					202 -> 206	Substitution			32.5% -> 33.2%	1.5E-120
T	2608388	2608388	1	1		A -> T					203	SNP (transversion)			27.1%	1.6E-104
T	2608390	2608390	1	1		C -> T					200	SNP (transition)			32.5%	5.8E-97
C	2608422	2608422	1	1		T -> C					168	SNP (transition)			41.1%	3.7E-125
G	2608431	2608431	1	1		A -> G					151	SNP (transition)			41.7%	5.6E-115
G	2608450	2608450	1	1		T -> G					132	SNP (transversion)			27.3%	3.0E-51
C	2608474	2608474	1	1		T -> C					84	SNP (transition)			38.1%	3.6E-67
T	2608475	2608475	1	1		A -> T					84	SNP (transversion)			51.2%	1.7E-75
A	2608493	2608493	1	1		T -> A					67	SNP (transversion)			47.8%	6.5E-49
A	2608529	2608529	1	1		T -> A					41	SNP (transversion)			29.3%	1.8E-11
T	2608533	2608533	1	1		C -> T					44	SNP (transition)			29.5%	7.2E-15
C	2635729	2635729	1	1		A -> C					69	SNP (transversion)			34.8%	2.8E-35
T	2635734	2635734	1	1		C -> T					67	SNP (transition)			40.3%	2.7E-44
A	2635784	2635784	1	1		G -> A					53	SNP (transition)			32.1%	2.3E-21
C	2635794	2635794	1	1		A -> C					49	SNP (transversion)			26.5%	3.4E-14
G	2635822	2635822	1	1		C -> G					38	SNP (transversion)			28.9%	1.3E-11
C	2635965	2635965	1	1		T -> C					67	SNP (transition)			25.4%	9.3E-18
C	2636006	2636006	1	1		T -> C					62	SNP (transition)			29.0%	1.2E-21
C	2848166	2848166	1	1		T -> C					71	SNP (transition)			26.8%	1.0E-25
C	2848227	2848227	1	1		T -> C					172	SNP (transition)			32.6%	2.0E-128
C	2848258	2848258	1	1		A -> C					207	SNP (transversion)			72.0%	0.0
G	2848265	2848265	1	1		A -> G					218	SNP (transition)			59.2%	0.0
G	2848357	2848357	1	1		A -> G					206	SNP (transition)			33.5%	5.7E-152
C	2892626	2892626	1	1		G -> C					368	SNP (transversion)			45.9%	0.0
CC	2906870	2906871	2	1		TG -> CC					37	Substitution			51.4%	5.3E-38
G	2906881	2906881	1	1		T -> G					23	SNP (transversion)			78.3%	3.2E-32
A	2906933	2906933	1	1		G -> A					28	SNP (transition)			28.6%	2.6E-10
C	2906974	2906974	1	1		A -> C					46	SNP (transversion)			50.0%	4.2E-27
T	2907021	2907021	1	1		C -> T					53	SNP (transition)			26.4%	1.4E-8
T	2907207	2907207	1	1		G -> T					53	SNP (transversion)			39.6%	6.8E-7
GTA	2907333	2907335	3	1		TGG -> GTA					11	Substitution			54.5%	4.6E-13
C	2907372	2907372	1	1		T -> C					12	SNP (transition)			75.0%	4.3E-19
C	2907374	2907373	0	1		+C					12	Insertion			75.0%	4.3E-19
C	2907391	2907391	1	1		T -> C					14	SNP (transition)			85.7%	3.6E-25
G	2907588	2907588	1	1		C -> G					55	SNP (transversion)			25.5%	1.7E-31
C	2907590	2907590	1	1		A -> C					55	SNP (transversion)			25.5%	1.1E-35
CT	2907596	2907597	2	1		TG -> CT					51 -> 52	Substitution			25.0% -> 25.5%	6.1E-28
T	2907775	2907775	1	1		G -> T					47	SNP (transversion)			68.1%	7.4E-85
A	2907956	2907956	1	1		G -> A					46	SNP (transition)			63.0%	2.3E-29
T	2907984	2907984	1	1		C -> T					48	SNP (transition)			35.4%	1.3E-15
A	2907997	2907997	1	1		C -> A					50	SNP (transversion)			52.0%	4.5E-16
T	2908037	2908037	1	1		C -> T					47	SNP (transition)			51.1%	2.1E-10
G	2908173	2908173	1	1		T -> G					34	SNP (transversion)			32.4%	2.3E-14
G	2908230	2908230	1	1		T -> G					53	SNP (transversion)			37.7%	2.6E-11
T	2908307	2908307	1	1		A -> T					24	SNP (transversion)			25.0%	1.3E-10
T	2908324	2908324	1	1		C -> T					26	SNP (transition)			61.5%	3.2E-29
G	2909879	2909879	1	1		A -> G					67	SNP (transition)			31.3%	2.9E-38
A	2909889	2909889	1	1		G -> A					57	SNP (transition)			28.1%	3.4E-30
T	2909899	2909899	1	1		C -> T					51	SNP (transition)			33.3%	7.1E-37
T	2909917	2909917	1	1		C -> T					52	SNP (transition)			40.4%	6.8E-37
A	2910033	2910033	1	1		G -> A					43	SNP (transition)			25.6%	2.5E-16
A	2910073	2910073	1	1		T -> A					70	SNP (transversion)			35.7%	1.1E-17
C	2910091	2910091	1	1		T -> C					87	SNP (transition)			54.0%	2.8E-93
A	2910118	2910117	0	1		(A)3 -> (A)4					119	Insertion (tandem repeat)			28.6%	1.0E-79
G	2910143	2910143	1	1		C -> G					115	SNP (transversion)			45.2%	4.5E-139
GT	2929332	2929333	2	1		CC -> GT					241 -> 242	Substitution			28.5% -> 29.0%	5.6E-149
T	2929339	2929339	1	1		C -> T					256	SNP (transition)			34.0%	1.7E-200
C	2929387	2929387	1	1		T -> C					308	SNP (transition)			53.6%	0.0
C	2929394	2929394	1	1		A -> C					322	SNP (transversion)			52.8%	0.0
T	2929498	2929498	1	1		C -> T					413	SNP (transition)			57.1%	0.0
T	2929502	2929502	1	1		C -> T					410	SNP (transition)			61.0%	0.0
T	2929507	2929507	1	1		C -> T					408	SNP (transition)			62.5%	0.0
T	2968008	2968008	1	1		C -> T					30	SNP (transition)			100.0%	1.0E-93
G	2968023	2968023	1	1		A -> G					25	SNP (transition)			76.0%	5.6E-62
C	2968027	2968027	1	1		T -> C					22	SNP (transition)			72.7%	1.2E-48
A	2968039	2968039	1	1		G -> A					22	SNP (transition)			59.1%	6.2E-38
G	2968051	2968051	1	1		A -> G					19	SNP (transition)			63.2%	5.0E-38
	2968055	2968055	1	1		-A					19	Deletion			63.2%	7.8E-25
C	2968065	2968065	1	1		A -> C					17	SNP (transversion)			52.9%	7.7E-28
ATG	2968077	2968079	3	1		GAA -> ATG					14	Substitution			42.9%	1.2E-17
G	2968083	2968083	1	1		C -> G					11	SNP (transversion)			36.4%	2.1E-11
GT	2968085	2968086	2	1		AC -> GT					11	Substitution			36.4%	3.3E-10
AG	2968093	2968094	2	1		TC -> AG					9	Substitution			33.3%	2.1E-8
G	2968476	2968476	1	1		A -> G					22	SNP (transition)			31.8%	1.0E-13
A	2968492	2968492	1	1		G -> A					23	SNP (transition)			43.5%	1.1E-24
T	2968546	2968546	1	1		G -> T					40	SNP (transversion)			40.0%	2.3E-28
GC	2968566	2968567	2	1		CA -> GC					46	Substitution			32.6%	7.5E-21
	2968578	2968578	1	1		-C					53	Deletion			35.8%	8.1E-14
G	2968612	2968612	1	1		T -> G					84	SNP (transversion)			56.0%	1.3E-89
A	2968615	2968615	1	1		C -> A					86	SNP (transversion)			29.1%	2.1E-34
C	2968620	2968620	1	1		T -> C					86	SNP (transition)			25.6%	9.2E-38
T	2968625	2968625	1	1		G -> T					89	SNP (transversion)			25.8%	3.6E-28
A	2968634	2968634	1	1		G -> A					96	SNP (transition)			26.0%	1.7E-35
G	2968638	2968638	1	1		T -> G					97	SNP (transversion)			34.0%	1.5E-47
G	2968750	2968750	1	1		A -> G					60	SNP (transition)			25.0%	1.5E-24
G	2975583	2975583	1	1		A -> G					277	SNP (transition)			27.4%	3.7E-182
C	2975607	2975607	1	1		A -> C					279	SNP (transversion)			40.1%	4.7E-290
A	2975646	2975646	1	1		G -> A					254	SNP (transition)			39.8%	2.6E-271
C	2975656	2975656	1	1		T -> C					244	SNP (transition)			33.2%	4.5E-210
G	2975663	2975663	1	1		A -> G					245	SNP (transition)			28.2%	3.0E-180
C	3007217	3007217	1	1		T -> C					33	SNP (transition)			27.3%	7.6E-23
TGGCGG	3163645	3163650	6	1		GTTGAT -> TGGCGG					8 -> 10	Substitution			33.3% -> 50.0%	2.1E-8
A	3163652	3163652	1	1		G -> A					10	SNP (transition)			80.0%	1.8E-25
A	3163657	3163657	1	1		C -> A					11	SNP (transversion)			27.3%	8.2E-8
GC	3163659	3163660	2	1		CG -> GC					11 -> 12	Substitution			25.0% -> 27.3%	1.1E-7
T	3163662	3163662	1	1		A -> T					14	SNP (transversion)			28.6%	3.9E-8
A	3163666	3163665	0	1		+A					14	Insertion			28.6%	3.9E-8
CCC	3163667	3163669	3	1		GTG -> CCC					14 -> 15	Substitution			26.7% -> 28.6%	5.3E-8
CGG	3163671	3163673	3	1		GAA -> CGG					15	Substitution			26.7%	5.3E-8
G	3163802	3163802	1	1		C -> G					16	SNP (transversion)			37.5%	2.9E-8
A	3163804	3163804	1	1		T -> A					16	SNP (transversion)			37.5%	2.9E-8
TC	3163896	3163897	2	1		GG -> TC					16	Substitution			25.0%	1.8E-9
C	3163900	3163900	1	1		T -> C					19	SNP (transition)			31.6%	1.1E-16

(v.1.17.3)

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