P. umsongensis GO16 ttdR KO ALE_Octanoate Whole-Genome Sequencing raw data

Selected Cell

Cell:

Value:

Sheet1

A

B

C

D

E

F

G

H

I

J

K

L

M

N

O

P

Q

1001

1002

1003

1004

1005

1006

1007

1008

1009

1010

1011

1012

1013

1014

1015

1016

1017

1018

1019

1020

1021

1022

1023

1024

1025

1026

1027

1028

1029

1030

1031

1032

1033

1034

1035

1036

1037

1038

1039

1040

1041

1042

1043

1044

1045

1046

1047

1048

1049

1050

1051

1052

1053

1054

1055

1056

1057

1058

1059

1060

1061

1062

1063

1064

1065

1066

1067

1068

1069

1070

1071

1072

1073

1074

1075

1076

1077

1078

1079

1080

1081

1082

1083

1084

1085

1086

1087

1088

1089

1090

1091

1092

1093

1094

1095

1096

1097

1098

1099

1100

1101

1102

1103

1104

1105

1106

1107

1108

1109

1110

1111

1112

1113

1114

1115

1116

1117

1118

1119

1120

1121

1122

1123

1124

1125

1126

1127

1128

1129

1130

1131

1132

1133

1134

1135

1136

1137

1138

1139

1140

1141

1142

1143

1144

1145

1146

1147

1148

1149

1150

1151

1152

1153

1154

1155

1156

1157

1158

1159

1160

1161

1162

1163

1164

1165

1166

1167

1168

1169

1170

1171

1172

1173

1174

1175

1176

1177

1178

1179

1180

1181

1182

1183

1184

1185

1186

1187

1188

1189

1190

1191

1192

1193

1194

1195

1196

1197

1198

1199

1200

T	952047	952047	1	1		C -> T					84	SNP (transition)			29.8%	3.9E-11
G	952194	952194	1	1		T -> G					79	SNP (transversion)			55.7%	7.1E-84
A	952204	952204	1	1		G -> A					80	SNP (transition)			48.8%	2.2E-71
C	952222	952222	1	1		A -> C					83	SNP (transversion)			37.3%	1.1E-61
G	952251	952251	1	1		T -> G					89	SNP (transversion)			40.4%	7.0E-34
G	952288	952288	1	1		A -> G					39	SNP (transition)			25.6%	5.4E-14
C	952292	952292	1	1		T -> C					37	SNP (transition)			29.7%	5.6E-15
T	952450	952450	1	1		C -> T					143	SNP (transition)			65.0%	1.1E-175
G	952451	952451	1	1		C -> G					147	SNP (transversion)			57.8%	1.5E-162
C	952476	952476	1	1		T -> C					207	SNP (transition)			27.5%	3.1E-69
T	952487	952487	1	1		C -> T					222	SNP (transition)			25.2%	1.0E-126
G	952514	952514	1	1		A -> G					309	SNP (transition)			57.3%	0.0
C	952547	952547	1	1		T -> C					370	SNP (transition)			39.5%	3.7E-274
C	952558	952558	1	1		T -> C					383	SNP (transition)			39.4%	1.8E-298
A	952566	952566	1	1		G -> A					386	SNP (transition)			42.5%	4.1E-298
C	952656	952656	1	1		T -> C					179	SNP (transition)			99.4%	0.0
G	952672	952672	1	1		A -> G					136	SNP (transition)			75.0%	4.1E-193
A	952673	952673	1	1		G -> A					132	SNP (transition)			74.2%	9.3E-146
C	952691	952691	1	1		A -> C					75	SNP (transversion)			53.3%	2.2E-63
A	952707	952707	1	1		C -> A					42	SNP (transversion)			83.3%	2.5E-63
CT	952719	952720	2	1		GG -> CT					23 -> 24	Substitution			45.8% -> 47.8%	1.5E-18
TC	952730	952731	2	1		GA -> TC					13 -> 14	Substitution			92.9% -> 100.0%	4.0E-24
G	952755	952755	1	1		T -> G					22	SNP (transversion)			100.0%	1.0E-55
A	952800	952800	1	1		C -> A					37	SNP (transversion)			94.6%	6.6E-103
A	952802	952802	1	1		G -> A					36	SNP (transition)			88.9%	9.3E-89
T	1137831	1137831	1	1		C -> T					124	SNP (transition)			27.4%	7.7E-69
A	1137837	1137837	1	1		G -> A					137	SNP (transition)			34.3%	2.4E-109
G	1137852	1137852	1	1		A -> G					134	SNP (transition)			37.3%	1.8E-113
G	1137854	1137854	1	1		C -> G					135	SNP (transversion)			34.1%	6.9E-107
	1137901	1137903	3	1		-CAA					127 -> 133	Deletion			33.1% -> 34.6%	6.7E-58
CC	1137911	1137912	2	1		TG -> CC					125 -> 127	Substitution			34.6% -> 35.2%	1.1E-102
C	1137922	1137922	1	1		T -> C					129	SNP (transition)			34.1%	1.0E-106
A	1137926	1137926	1	1		C -> A					130	SNP (transversion)			33.8%	5.5E-89
T	1137939	1137939	1	1		C -> T					131	SNP (transition)			32.8%	9.1E-108
GG	1137947	1137948	2	1		AC -> GG					119 -> 122	Substitution			27.7% -> 28.7%	1.6E-83
G	1137950	1137950	1	1		T -> G					116	SNP (transversion)			26.7%	4.5E-81
A	1137952	1137952	1	1		G -> A					115	SNP (transition)			26.1%	3.6E-63
T	1157587	1157587	1	1		A -> T					351	SNP (transversion)			31.3%	2.5E-270
G	1157603	1157603	1	1		A -> G					325	SNP (transition)			27.4%	8.2E-222
C	1157605	1157605	1	1		G -> C					317	SNP (transversion)			25.2%	2.7E-188
CT	1185455	1185456	2	1		GC -> CT					273 -> 274	Substitution			70.4% -> 71.4%	6.6E-297
A	1295021	1295021	1	1		C -> A					163	SNP (transversion)			31.9%	8.2E-119
TG	1295024	1295025	2	1		CA -> TG					176 -> 177	Substitution			26.6% -> 26.7%	2.8E-103
G	1295055	1295055	1	1		A -> G					320	SNP (transition)			29.7%	4.3E-212
T	1295058	1295058	1	1		C -> T					342	SNP (transition)			32.7%	2.0E-255
T	1295081	1295081	1	1		G -> T					416	SNP (transversion)			28.6%	7.9E-275
A	1295125	1295125	1	1		G -> A					320	SNP (transition)			28.4%	3.7E-192
C	1295128	1295128	1	1		T -> C					304	SNP (transition)			27.3%	1.5E-198
A	1295143	1295143	1	1		T -> A					240	SNP (transversion)			65.0%	0.0
C	1295157	1295157	1	1		G -> C					177	SNP (transversion)			53.1%	8.0E-278
G	1295159	1295159	1	1		A -> G					171	SNP (transition)			49.1%	1.1E-227
G	1295165	1295165	1	1		T -> G					162	SNP (transversion)			42.6%	1.2E-181
C	1295176	1295176	1	1		G -> C					137	SNP (transversion)			31.4%	2.3E-115
G	1295178	1295178	1	1		T -> G					128	SNP (transversion)			27.3%	3.1E-88
G	1303031	1303031	1	1		A -> G					193	SNP (transition)			27.5%	2.5E-8
C	1352983	1352983	1	1		G -> C					46	SNP (transversion)			28.3%	2.0E-27
C	1375281	1375281	1	1		T -> C					133	SNP (transition)			36.8%	2.4E-91
G	1375291	1375291	1	1		C -> G					136	SNP (transversion)			39.0%	5.3E-95
CCT	1375299	1375301	3	1		ATG -> CCT					137 -> 141	Substitution			39.0% -> 40.1%	2.6E-93
A	1375305	1375305	1	1		G -> A					136	SNP (transition)			41.9%	2.5E-104
CC	1375307	1375308	2	1		AG -> CC					137 -> 138	Substitution			42.3% -> 42.8%	3.1E-112
A	1375327	1375327	1	1		T -> A					143	SNP (transversion)			42.7%	4.6E-106
C	1375331	1375331	1	1		T -> C					143	SNP (transition)			48.3%	1.7E-131
G	1375366	1375366	1	1		A -> G					152	SNP (transition)			42.8%	1.8E-119
A	1375371	1375371	1	1		G -> A					152	SNP (transition)			42.8%	5.4E-113
GG	1375383	1375384	2	1		AA -> GG					162	Substitution			38.9%	8.2E-119
G	1375391	1375391	1	1		C -> G					156	SNP (transversion)			38.5%	6.7E-107
C	1375395	1375395	1	1		T -> C					144	SNP (transition)			32.6%	5.2E-80
G	1375397	1375397	1	1		C -> G					141	SNP (transversion)			29.8%	1.1E-69
A	1375399	1375399	1	1		G -> A					138	SNP (transition)			26.8%	5.7E-56
C	1456214	1456213	0	1		(C)3 -> (C)4					343	Insertion (tandem repeat)			100.0%	0.0
G	1460768	1460767	0	1		+G					274	Insertion			96.7%	0.0
C	1462221	1462220	0	1		+C					289	Insertion			99.0%	0.0
T	1473291	1473291	1	1		A -> T					414	SNP (transversion)			25.1%	1.8E-171
T	1473325	1473325	1	1		G -> T					470	SNP (transversion)			30.4%	1.8E-220
G	1478030	1478030	1	1		A -> G					63	SNP (transition)			93.7%	7.3E-119
C	1478045	1478045	1	1		T -> C					74	SNP (transition)			94.6%	1.1E-120
G	1478053	1478053	1	1		A -> G					86	SNP (transition)			53.5%	7.0E-82
GG	1478065	1478066	2	1		AA -> GG					96	Substitution			93.8%	7.7E-127
C	1478096	1478096	1	1		T -> C					81	SNP (transition)			30.9%	1.9E-7
A	1478106	1478106	1	1		G -> A					82	SNP (transition)			34.1%	5.1E-19
A	1478132	1478132	1	1		G -> A					83	SNP (transition)			32.5%	1.8E-8
T	1478132	1478132	1	1		G -> T					83	SNP (transversion)			38.6%	1.5E-17
G	1478172	1478172	1	1		A -> G					67	SNP (transition)			49.3%	3.3E-25
G	1478194	1478194	1	1		T -> G					73	SNP (transversion)			26.0%	2.8E-16
A	1478221	1478221	1	1		G -> A					39	SNP (transition)			30.8%	6.6E-13
T	1478237	1478237	1	1		A -> T					41	SNP (transversion)			48.8%	1.8E-23
T	1478254	1478254	1	1		G -> T					39	SNP (transversion)			56.4%	2.1E-25
A	1478386	1478386	1	1		G -> A					39	SNP (transition)			28.2%	1.6E-24
A	1478391	1478391	1	1		G -> A					48	SNP (transition)			37.5%	1.1E-43
C	1478397	1478397	1	1		A -> C					66	SNP (transversion)			43.9%	4.3E-69
A	1478480	1478480	1	1		G -> A					201	SNP (transition)			34.8%	1.2E-134
T	1478535	1478535	1	1		C -> T					198	SNP (transition)			36.4%	6.3E-133
A	1478608	1478608	1	1		G -> A					89	SNP (transition)			25.8%	3.7E-17
A	1478655	1478655	1	1		T -> A					63	SNP (transversion)			31.7%	4.7E-8
A	1478673	1478673	1	1		T -> A					56	SNP (transversion)			30.4%	9.5E-7
T	1478713	1478713	1	1		C -> T					45	SNP (transition)			26.7%	1.7E-21
G	1501490	1501490	1	1		T -> G					44	SNP (transversion)			29.5%	4.1E-38
A	1501492	1501492	1	1		C -> A					45	SNP (transversion)			33.3%	3.4E-40
TTG	1501494	1501496	3	1		CAC -> TTG					42	Substitution			35.7%	9.6E-35
CGTAA	1501498	1501502	5	1		GCCCC -> CGTAA					41 -> 44	Substitution			39.0% -> 44.2%	2.6E-47
GGGA	1501504	1501507	4	1		TCCC -> GGGA					44 -> 48	Substitution			50.0% -> 59.1%	1.3E-73
T	1501509	1501509	1	1		C -> T					48	SNP (transition)			62.5%	7.3E-93
A	1501512	1501512	1	1		T -> A					47	SNP (transversion)			66.0%	4.7E-97
AACGATGGCAC	1501517	1501527	11	1		GCGAGCATGCT -> AACGATGGCAC					44 -> 51	Substitution			67.4% -> 87.5%	1.3E-98
G	1501530	1501530	1	1		C -> G					50	SNP (transversion)			98.0%	1.6E-170
GGT	1501532	1501534	3	1		ATG -> GGT					51 -> 53	Substitution			96.1% -> 96.2%	5.1E-179
	1516008	1516008	1	1		(C)10 -> (C)9					238	Deletion (tandem repeat)			98.3%	0.0
G	1672320	1672320	1	1		T -> G					70	SNP (transversion)			30.0%	2.9E-48
G	1676240	1676240	1	1		C -> G					44	SNP (transversion)			29.5%	7.7E-24
A	1676243	1676243	1	1		C -> A					42	SNP (transversion)			26.2%	1.2E-18
T	1676277	1676277	1	1		G -> T					44	SNP (transversion)			47.7%	3.3E-18
A	1676302	1676302	1	1		T -> A					36	SNP (transversion)			58.3%	1.2E-20
T	1676320	1676320	1	1		A -> T					37	SNP (transversion)			35.1%	9.1E-10
A	1676349	1676349	1	1		C -> A					44	SNP (transversion)			97.7%	2.0E-46
C	1676397	1676397	1	1		A -> C					116	SNP (transversion)			36.2%	4.6E-49
G	1676426	1676426	1	1		T -> G					145	SNP (transversion)			43.4%	1.1E-122
T	1676436	1676436	1	1		C -> T					155	SNP (transition)			36.1%	2.5E-81
T	1676444	1676444	1	1		C -> T					164	SNP (transition)			52.4%	4.6E-142
T	1676445	1676445	1	1		C -> T					164	SNP (transition)			28.0%	4.0E-52
	1676490	1676490	1	1		(T)3 -> (T)2					161	Deletion (tandem repeat)			29.8%	1.9E-28
	1676495	1676496	2	1		-GG					161 -> 162	Deletion			25.3% -> 25.5%	5.7E-29
A	1676499	1676499	1	1		T -> A					159	SNP (transversion)			25.8%	4.7E-61
	1676502	1676502	1	1		-C					159	Deletion			25.8%	2.5E-29
C	1676506	1676506	1	1		A -> C					148	SNP (transversion)			29.1%	8.9E-71
	1676508	1676508	1	1		-T					144	Deletion			29.9%	1.1E-37
G	1676578	1676578	1	1		A -> G					91	SNP (transition)			65.9%	1.3E-90
G	1676589	1676589	1	1		A -> G					84	SNP (transition)			25.0%	1.6E-25
G	1676598	1676598	1	1		A -> G					88	SNP (transition)			36.4%	1.0E-34
C	1676655	1676655	1	1		T -> C					71	SNP (transition)			28.2%	2.1E-39
A	1676659	1676659	1	1		G -> A					71	SNP (transition)			26.8%	5.1E-37
G	1676730	1676730	1	1		T -> G					52	SNP (transversion)			32.7%	6.0E-15
TG	1677360	1677361	2	1		CC -> TG					95	Substitution			31.6% -> 32.6%	3.7E-48
A	1677367	1677367	1	1		T -> A					96	SNP (transversion)			27.1%	6.2E-40
C	1677429	1677428	0	1		(C)4 -> (C)5					95	Insertion (tandem repeat)			34.7%	1.2E-44
C	1677430	1677430	1	1		T -> C					95	SNP (transition)			37.9%	3.2E-50
A	1677435	1677435	1	1		C -> A					96	SNP (transversion)			37.5%	5.1E-50
TA	1677457	1677458	2	1		CG -> TA					92 -> 93	Substitution			34.4% -> 34.8%	7.1E-53
T	1677462	1677462	1	1		C -> T					92	SNP (transition)			60.9%	1.6E-109
G	1677476	1677476	1	1		A -> G					85	SNP (transition)			45.9%	6.9E-74
	1677572	1677572	1	1		-G					52	Deletion			25.0%	1.3E-17
A	1744353	1744353	1	1		G -> A					79	SNP (transition)			26.6%	1.1E-40
G	1744490	1744490	1	1		A -> G					81	SNP (transition)			32.1%	1.6E-52
T	1744525	1744525	1	1		C -> T					73	SNP (transition)			26.0%	2.5E-27
C	1744632	1744632	1	1		A -> C					182	SNP (transversion)			40.1%	2.2E-102
A	1744750	1744750	1	1		G -> A					80	SNP (transition)			26.3%	4.5E-28
CA	1960167	1960168	2	1		TT -> CA					453 -> 456	Substitution			26.9% -> 27.4%	1.1E-161
T	1960180	1960180	1	1		G -> T					473	SNP (transversion)			29.4%	2.0E-184
A	2084122	2084122	1	1		C -> A					255	SNP (transversion)			29.0%	3.9E-172
C	2084130	2084130	1	1		T -> C					260	SNP (transition)			30.8%	2.3E-180
C	2084145	2084145	1	1		G -> C					258	SNP (transversion)			34.5%	1.5E-223
C	2084171	2084171	1	1		T -> C					251	SNP (transition)			26.3%	7.9E-144
	2084174	2084174	1	1		-T					245	Deletion			25.3%	5.1E-97
G	2084188	2084188	1	1		T -> G					232	SNP (transversion)			25.9%	2.0E-130
T	2159877	2159877	1	1		C -> T					67	SNP (transition)			25.4%	9.2E-28
A	2159884	2159884	1	1		G -> A					65	SNP (transition)			29.2%	2.0E-28
TC	2159899	2159900	2	1		GT -> TC					76	Substitution			27.6%	3.4E-43
T	2160003	2160003	1	1		G -> T					74	SNP (transversion)			44.6%	2.2E-75
A	2160030	2160030	1	1		C -> A					68	SNP (transversion)			33.8%	2.2E-40
A	2160032	2160032	1	1		C -> A					69	SNP (transversion)			31.9%	3.6E-51
A	2160043	2160043	1	1		G -> A					68	SNP (transition)			30.9%	5.1E-36
A	2160064	2160064	1	1		G -> A					70	SNP (transition)			27.1%	6.0E-41
T	2160076	2160076	1	1		A -> T					68	SNP (transversion)			25.0%	5.1E-31
C	2161931	2161931	1	1		G -> C					175	SNP (transversion)			26.3%	2.4E-105
C	2161934	2161934	1	1		T -> C					173	SNP (transition)			28.3%	4.6E-109
G	2161984	2161984	1	1		A -> G					161	SNP (transition)			36.6%	3.1E-121
A	2161994	2161994	1	1		G -> A					160	SNP (transition)			29.4%	3.0E-110
T	2200890	2200890	1	1		C -> T					58	SNP (transition)			65.5%	1.1E-95
CA	2200891	2200892	2	1		GG -> CA					55 -> 59	Substitution			78.2% -> 79.7%	8.6E-114
G	2200917	2200917	1	1		C -> G					53	SNP (transversion)			39.6%	1.4E-34
A	2200920	2200920	1	1		C -> A					52	SNP (transversion)			36.5%	9.9E-29
GG	2200924	2200925	2	1		TT -> GG					46 -> 48	Substitution			26.1% -> 27.1%	4.6E-13
T	2201038	2201038	1	1		C -> T					16	SNP (transition)			25.0%	1.8E-7
	2201305	2201305	1	1		-C					32	Deletion			28.1%	3.0E-12
	2201310	2201310	1	1		-T					35	Deletion			34.3%	4.2E-10
C	2201388	2201388	1	1		T -> C					61	SNP (transition)			26.2%	7.7E-33
	2201454	2201454	1	1		-C					36	Deletion			36.1%	6.1E-10
T	2201455	2201455	1	1		A -> T					35	SNP (transversion)			37.1%	2.2E-25
	2201455	2201455	1	1		-A					35	Deletion			37.1%	4.1E-10
G	2201462	2201462	1	1		A -> G					33	SNP (transition)			57.6%	3.2E-41
C	2201466	2201466	1	1		T -> C					35	SNP (transition)			62.9%	5.7E-51
C	2201607	2201607	1	1		T -> C					74	SNP (transition)			36.5%	3.5E-40
T	2201633	2201633	1	1		C -> T					87	SNP (transition)			39.1%	1.4E-61
T	2201660	2201660	1	1		C -> T					87	SNP (transition)			27.6%	1.6E-51
C	2201664	2201664	1	1		T -> C					85	SNP (transition)			34.1%	3.3E-62
G	2201668	2201668	1	1		T -> G					83	SNP (transversion)			71.1%	8.1E-116
	2201676	2201676	1	1		(C)5 -> (C)4					81	Deletion (tandem repeat)			28.4%	1.7E-31
T	2201683	2201683	1	1		A -> T					89	SNP (transversion)			31.5%	4.1E-70
C	2201687	2201687	1	1		T -> C					87	SNP (transition)			32.2%	1.9E-70
T	2201705	2201705	1	1		C -> T					87	SNP (transition)			67.8%	2.4E-137
T	2201710	2201710	1	1		C -> T					86	SNP (transition)			27.9%	1.8E-16
A	2201711	2201711	1	1		G -> A					87	SNP (transition)			36.8%	9.8E-86
C	2201716	2201716	1	1		T -> C					92	SNP (transition)			44.6%	7.5E-118
G	2201724	2201724	1	1		A -> G					92	SNP (transition)			66.3%	3.6E-153
A	2214852	2214852	1	1		G -> A					78	SNP (transition)			80.8%	5.5E-193
A	2214901	2214901	1	1		G -> A					81	SNP (transition)			51.9%	1.9E-103
A	2214996	2214996	1	1		T -> A					39	SNP (transversion)			41.0%	3.9E-7
T	2215039	2215039	1	1		G -> T					57	SNP (transversion)			26.3%	6.4E-28
A	2215043	2215043	1	1		C -> A					58	SNP (transversion)			39.7%	3.6E-24
A	2215233	2215233	1	1		G -> A					63	SNP (transition)			39.7%	1.2E-16

(v.1.17.3)

About FAIRDOMHub | Funding and Programmes | Credits | Terms & Conditions | Imprint | Cookie preferences

Copyright © 2008 - 2026 The University of Manchester and HITS gGmbH