Membrane protein-enriched fraction proteomics of Desulfobacterium autotrophicum HRM2

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Accession	Protein	HRM2_MP_1prop_	HRM2_MP_buty_	HRM2_MP_form_	HRM2_MP_fumar_	HRM2_MP_hydco2_	HRM2_MP_lact_	HRM2_MP_myris_	HRM2_MP_succ_
HRM2_00010	dnaN: DNA polymerase III, beta subunit (EC 2.7.7.7)	0	0	0	0	0	0	0	0
HRM2_00020	gyrB: DNA gyrase subunit B (EC 5.99.1.3)	0	0	0	0	0	0	0	0
HRM2_00030	TPR repeat protein	0	0	0	0	0	0	0	0
HRM2_00040	tonB: outer membrane transport energization protein TonB (TC 2.C.1.1.1)	0	0	0	0	0	0	0	0
HRM2_00050	exbD: outer membrane transport energization protein ExbD (TC 2.C.1.1.1)	0	0	0	0	0	0	0	0
HRM2_00060	tolQ2: outer membrane transport energization protein ExbB (TC 2.C.1.1.1)	0	0	0	0	0	0	0	0
HRM2_00070	tolQ3: outer membrane transport energization protein ExbB (TC 2.C.1.1.1)	0	0	0	4	0	0	0	8
HRM2_00080	hypothetical protein	0	0	0	1	2	1	0	0
HRM2_00090	hypothetical protein	0	0	0	0	0	0	0	0
HRM2_00100	putative aminotransferase	0	0	0	0	0	0	0	0
HRM2_00110	hypothetical protein	0	0	0	0	0	0	0	0
HRM2_00120	SWI/SNF helicase family protein	0	0	0	0	0	0	0	0
HRM2_00130	xerD1: XerD1 site-specific tyrosine recombinase XerD1 (DNA breaking-rejoining enzyme)	0	0	0	0	0	0	0	0
HRM2_00140	hmrR1: HmrR1 HTH-type transcriptional regulator (heavy metal/copper efflux protein)	0	0	0	0	0	0	0	0
HRM2_00150	transposase for insertion sequence 801 (transposase 32 family protein)	0	0	0	0	0	0	0	0
HRM2_00160	hypothetical protein	0	0	0	0	0	0	0	0
HRM2_00170	putative 2-component response regulator	0	0	0	0	0	0	0	0
HRM2_00180	cbiC: cobalt-precorrin 8 methylmutase (EC 5.4.1.-)/precorrin-8X methylmutase (EC 5.4.1.2)	0	0	0	0	0	0	0	0
HRM2_00190	cbiA1: hydrogenobyrinic acid a,c-diamide synthase (glutamine-hydrolysing) (EC 6.3.5.9)/cobyrinate a,c-diamide synthase (EC 6.3.5.11)	0	0	0	0	0	1	0	0
HRM2_00200	cbiD: CbiD cobalamin biosynthesis protein CbiD (cobalt-precorrin-6A synthase)	0	0	0	0	0	0	0	0
HRM2_00210	nthA: NthA DNA-binding endonuclease III NthA (helix-hairpin-helix DNA-binding protein)	0	0	0	0	0	0	0	0
HRM2_00220	putative secretion activating protein	0	0	0	0	0	0	0	0
HRM2_00230	norM: NorM	0	0	0	0	0	0	0	0
HRM2_00240	hypothetical protein	0	0	0	0	0	0	0	0
HRM2_00250	hypothetical protein	0	0	0	0	0	0	0	0
HRM2_00260	malT: MalT	0	0	0	0	0	0	0	0
HRM2_00270	predicted anti-anti-sigma factor (response regulator family protein)	0	0	0	0	0	0	0	0
HRM2_00280	PAS/PAC sensor signal transduction histidine kinase (EC 2.7.13.3)	0	0	0	0	0	0	0	0
HRM2_00290	amino acid/amide ABC transporter substrate-binding protein, HAAT family (TC 3.A.1.4.-)	0	0	0	0	0	0	0	0
HRM2_00300	hypothetical protein	0	0	0	0	0	0	0	0
HRM2_00310	hypothetical protein	0	0	0	0	0	0	0	0
HRM2_00320	glycosyl transferase, group 2 family protein	0	0	0	0	0	0	0	0
HRM2_00330	putative ABC-type transporter permease protein	0	0	0	0	0	0	0	0
HRM2_00340	putative ABC-type transporter permease protein	0	0	0	0	0	0	0	0
HRM2_00350	uncharacterized ABC-type transport system, periplasmic component	1	2	4	5	0	1	2	0
HRM2_00360	uncharacterized ABC transporter, ATP-binding protein	0	0	0	0	0	0	0	0
HRM2_00370	conserved hypothetical protein (putative phosphotransferase)	0	0	0	0	0	0	0	0
HRM2_00380	predicted Fe-S cluster protein	0	0	0	0	0	0	0	0
HRM2_00390	hypothetical protein	0	0	0	0	0	0	0	0
HRM2_00400	rlgA1: RlgA1 site-specific DNA-invertase/resolvase RlgA1 (Site-specific recombinase RlgA)	0	0	0	0	0	0	0	0
HRM2_00410	putative non-secretory transmembrane protein	0	0	0	0	0	0	0	0
HRM2_00420	hypothetical protein	0	0	0	0	0	0	0	0
HRM2_00430	silP: SilP	0	0	0	0	0	0	0	0
HRM2_00440	hypothetical protein	0	0	0	0	0	0	0	0
HRM2_00450	rndA: RndA cation efflux system family protein RndA (heavy metal, antibiotica resistance)	0	0	0	0	0	0	0	0
HRM2_00460	rndB: RndB predicted cation efflux system, transmembrane protein RndB (heavy metal, antibiotica resistance)	0	0	0	0	0	0	0	0
HRM2_00470	putative metal ion efflux outer membrane family protein (TolC-like)	0	0	0	0	0	0	0	0
HRM2_00480	putative metal ion efflux outer membrane family protein	0	0	0	0	0	0	0	0
HRM2_00490	mttB1: trimethylamine:corrinoid methyltransferase	0	0	0	0	0	0	0	0
HRM2_00500	putative choline/carnitine/betaine transporter (BCCT family protein)	0	0	0	0	0	0	0	0
HRM2_00510	mttC: MttC trimethylamine corrinoid protein (TCP)	0	0	0	0	0	0	0	0
HRM2_00520	metH1: MetH1 vitamin-B12 dependent methionine synthase MetH (5-methyltetrahydrofolate--homocysteine methyltransferase)	0	0	0	0	0	0	0	0
HRM2_00530	hypothetical protein	0	0	0	0	0	0	0	0
HRM2_00540	Phage integrase/recombinase family protein	0	0	0	0	0	0	0	0
HRM2_00550	conserved hypothetical protein (permease-like)	0	0	0	0	0	0	0	0
HRM2_00560	hypothetical protein	0	0	0	0	0	0	0	0
HRM2_00570	hypothetical protein	0	0	0	0	0	0	0	0
HRM2_00580	hypothetical protein	0	0	0	0	0	0	0	0
HRM2_00590	putative ABC-type transporter, ATP-binding protein	0	0	0	0	0	0	0	0
HRM2_00600	predicted xanthine/uracil permease family protein	0	0	0	0	0	0	0	0
HRM2_00610	ytfE: YtfE regulator of cell morphogenesis and NO signaling (RCMNS)	0	0	0	0	0	0	0	0
HRM2_00620	predicted C4-dicarboxylate transporter/malic acid transport protein	0	0	0	0	0	0	0	0
HRM2_00630	narI: NarI	0	0	0	0	0	0	0	0
HRM2_00640	narJ: respiratory nitrate reductase chaperone NarJ	0	0	0	0	0	0	0	0
HRM2_00650	narH: respiratory nitrate reductase beta subunit	0	0	0	0	0	0	0	0
HRM2_00660	narG: NarG	0	0	0	0	0	0	0	0
HRM2_00670	transcriptional regulator, TetR family	0	0	0	0	0	0	0	0
HRM2_00680	hlyD: HlyD	0	0	0	0	0	0	0	0
HRM2_00690	ABC-type transporter, predicted premease protein	0	0	0	0	0	0	0	0
HRM2_00700	ABC-type transporter, predicted ATP-binding protein	0	0	0	0	0	0	0	0
HRM2_00710	proton-shuffling outer membrane efflux protein (OprM-like)	0	0	0	0	0	0	0	0
HRM2_00720	putative serine/threonine-specific protein kinase	0	0	0	0	0	0	0	0
HRM2_00730	putative fusion protein with hemerythrin HHE cation binding domain	0	0	0	0	0	0	0	0
HRM2_00740	putative 5,10-methylene-tetrahydrofolate reductase MetF	0	0	0	0	0	0	0	0
HRM2_00750	hypothetical protein	0	0	0	0	0	0	0	0
HRM2_00760	hypothetical protein	0	0	0	0	0	0	0	0
HRM2_00770	conserved hypothetical protein with SAM binding motif	0	0	0	0	0	0	0	0
HRM2_00780	diguanylate phosphodiesterase	0	0	0	0	0	0	0	0
HRM2_00790	fhlA: FhlA	0	0	0	0	0	0	0	0
HRM2_00800	1-Cys peroxiredoxin (EC 1.11.1.15)	0	0	0	0	0	0	0	0
HRM2_00810	hdrD1: HdrD1	0	0	0	0	0	0	0	0
HRM2_00820	hydroxylamine reductase (6Fe-6S prismane cluster-containing protein)	0	0	0	0	0	0	0	0
HRM2_00830	metallo-beta-lactamase family protein (IMP dehydrogenase/GMP reductase:Beta-lactamase-like)	0	0	0	0	0	0	0	0
HRM2_00840	hypothetical protein	0	0	0	0	0	0	0	0
HRM2_00850	hypothetical protein	0	0	0	0	0	0	0	0
HRM2_00860	nnrR: transcriptional regulator, Crp/Fnr family	0	0	0	0	0	0	0	0
HRM2_00870	hydroxylamine oxidoreductase (HAO)	0	0	0	0	0	0	0	0
HRM2_00880	napC: NapC	0	0	0	0	0	0	0	0
HRM2_00890	hypothetical protein	0	0	0	0	0	0	0	0
HRM2_00900	putative H+-transporting two-sector ATPase, gamma subunit (AcrC-family protein)	0	0	0	0	0	0	0	0
HRM2_00910	putative H+-transporting two-sector ATPase, beta subunit (ArcA-family protein)	0	0	0	0	0	0	0	0
HRM2_00920	putative outer membrane efflux protein (OprM-family protein)	0	0	0	2	0	0	0	2
HRM2_00930	FAD-dependent pyridine nucleotide oxidoreductase (FPNCR family protein)	0	0	0	0	0	0	0	0
HRM2_00940	conserved hypothetical protein (non-secretory protein with 6 TMhelices)	0	0	0	0	0	0	0	0
HRM2_00950	fdx1: Fdx1	0	0	0	0	0	0	0	0
HRM2_00960	ubiE1: UbiE1	0	0	0	0	0	0	0	0
HRM2_00970	prsA1: PrsA1	0	0	0	0	0	0	0	0
HRM2_00980	RNA-binding protein (KH domain)	0	0	0	0	0	0	0	1
HRM2_00990	two domain fusion protein (N:methyltransferase, C:TPR-repeat family protein)	0	0	0	0	0	0	0	0
HRM2_01000	ABC-type transporter, periplamsic substrate binding protein	0	0	0	0	0	0	0	0
HRM2_01010	ABC-type transporter, ATP-binding protein (ATPase)	0	0	0	0	0	0	0	0
HRM2_01020	ABC-type transporter, permease protein (nitrate/sulfonate/bicarbonate transporter)	0	0	0	0	0	0	0	0
HRM2_01030	ABC-type transporter, periplasmic substrate binding protein	0	0	0	0	0	0	0	0
HRM2_01040	ABC-type transporter, permease protein	0	0	0	0	0	0	0	0
HRM2_01050	ABC-type transporter, ATP-binding protein	0	0	0	0	0	0	0	0
HRM2_01060	putative porin D precursor (outer membrane protein D2) (imipenem/basic amino acid-specific outer membrane pore)	0	0	0	0	0	0	0	0
HRM2_01070	putative ABC-type transporter, permease component	0	0	0	0	0	0	0	0
HRM2_01080	hypothetical protein	0	0	0	0	0	0	0	0
HRM2_01090	hypothetical protein	0	0	0	0	0	0	0	0
HRM2_01100	putative acetyl-CoA:acetoacetyl-CoA transferase	0	0	0	0	0	0	0	0
HRM2_01110	hypothetical protein	0	0	0	0	0	0	0	0
HRM2_01120	hypothetical protein	0	0	0	0	0	0	0	0
HRM2_01130	conserved hypothetical protein (SH3-like domain protein)	0	0	0	0	0	0	0	0
HRM2_01140	putative calcium-binding EF hand domain protein	0	0	0	0	0	0	0	0
HRM2_01150	fdx2: Fdx2	0	0	0	0	0	0	0	0
HRM2_01160	putative FAD/NAD(P)-binding:oxidoreductase	0	0	0	0	0	0	0	0
HRM2_01170	FAD-dependent pyridine nucleotide oxidoreductase (FPNCR family protein)	0	0	0	0	0	0	0	0
HRM2_01180	hypothetical protein	0	0	0	0	0	0	0	0
HRM2_01190	ilvD1: dihydroxy-acid dehydratase	0	0	0	0	0	0	0	0
HRM2_01200	putative D-lactate dehydrogenase (FAD / iron-sulfur cluster-binding domain protein)	0	0	0	0	0	0	0	0
HRM2_01210	homoserine/threonine efflux protein (LysE-type family translocator)	0	0	0	0	0	0	0	0
HRM2_01220	betL: BetL	0	0	0	0	0	0	0	0
HRM2_01230	putative methionine synthase I metH2	0	0	0	0	0	0	0	0
HRM2_01240	betT: BetT	0	0	0	0	0	0	0	0
HRM2_01250	mttB2: trimethylamine:corrinoid methyltransferase	0	0	0	0	0	0	0	0
HRM2_01260	sigma-54 dependent DNA-binding response regulator	0	0	0	0	0	0	0	0
HRM2_01270	signal transduction histidine kinase (ATPase)	0	0	0	0	0	0	0	0
HRM2_01280	hypothetical protein	0	0	0	0	0	0	0	0
HRM2_01290	transcriptional regulatory protein (DNA-binding response regulator)	0	0	0	0	0	0	0	0
HRM2_01300	hypothetical protein	0	0	0	0	0	0	0	0
HRM2_01320	subunit of type I site-specific restriction enzyme R	0	0	0	0	0	0	0	0
HRM2_01330	subunit of type I site-specific restriction enzyme R	0	0	0	0	0	0	0	0
HRM2_01340	putative metal-dependent hydrolase	0	0	0	0	0	0	0	0
HRM2_01350	putative nucleoside-diphosphate-sugar epimerase	0	0	0	0	0	0	0	0
HRM2_01360	furA: FurA	0	0	0	0	0	0	0	0
HRM2_01370	catA: CatA	0	0	0	0	0	0	0	0
HRM2_01380	ubiE2: UbiE2	0	0	0	0	0	0	0	0
HRM2_01390	speB: agmatinase (EC 3.5.3.11) 169	0	0	0	0	0	0	0	0
HRM2_01400	nspC: carboxynorspermidine decarboxylase (EC 4.1.1.-)	0	0	0	0	0	0	0	0
HRM2_01410	lysA1: carboxynorspermidine dehydrogenase	0	0	0	0	0	0	0	0
HRM2_01420	speA: arginine decarboxylase (EC 4.1.1.19)	0	0	0	0	0	0	0	0
HRM2_01430	putative periplasmic protein	0	0	0	0	0	0	0	0
HRM2_01440	hypothetical protein	0	0	0	0	0	0	0	0
HRM2_01450	predicted Zn-dependent protease HtpX-like protein	0	0	0	0	0	0	0	0
HRM2_01460	hypothetical protein	0	0	0	0	0	0	0	0
HRM2_01470	msrA: MsrA	0	0	0	0	0	0	0	0
HRM2_01480	predicted permease of the major facilitator superfamily (MFS)	0	0	0	0	0	0	0	0
HRM2_01490	conserved hypothetical protein with transglutaminase-like domain	0	0	0	0	0	0	0	0
HRM2_01500	glgC1: GlgC1	0	0	0	0	0	0	0	0
HRM2_01510	GTPase	0	0	1	0	0	0	0	0
HRM2_01520	fumarate lyase (DEAD box)	0	0	0	0	0	0	0	0
HRM2_01530	bioB1: BioB1	0	0	0	0	0	0	0	0
HRM2_01540	ABC-type transporter, ATP-binding protein (ATPase)	0	0	0	0	0	0	0	0
HRM2_01550	ABC-type transporter, permease protein (membrane spanning protein)	0	0	0	0	0	0	0	0
HRM2_01560	ABC-type transporter, substrate-binding protein	0	0	0	0	0	0	0	0
HRM2_01570	sigma-54 dependent transcriptional regulator	0	0	0	0	0	0	0	0
HRM2_01580	fdx3: Fdx3	0	0	0	0	0	0	0	0
HRM2_01590	hydA1: HydA1	0	0	0	0	0	0	0	0
HRM2_01600	fdhB1: FdhB1	0	0	0	0	0	0	0	0
HRM2_01610	fdhA1: FdhA1	0	0	0	0	0	0	0	0
HRM2_01620	aroC1: chorismate synthase (EC 4.2.3.5)	0	0	0	0	0	0	0	0
HRM2_01630	uncharacterized protein with HipA-like domain	0	0	0	0	0	0	0	0
HRM2_01640	HTH-type transcriptional regulatory protein	0	0	0	0	0	0	0	0
HRM2_01650	hypothetical protein	0	0	0	0	0	0	0	0
HRM2_01660	hypothetical protein	0	0	0	0	0	0	0	0
HRM2_01670	hypothetical protein	0	0	0	0	0	0	0	0
HRM2_01680	putative molybdenum ABC-type transporter, ATP-binding protein	0	0	0	0	0	0	0	0
HRM2_01690	putative molybdenum ABC-type transporter, permease subunit	0	0	0	0	0	0	0	0
HRM2_01700	modA3: ModA3	0	0	0	0	0	0	0	0
HRM2_01710	hypothetical protein	2	0	0	0	0	0	0	0
HRM2_01720	arsC1: protein tyrosine phosphatase	0	0	0	0	0	0	0	0
HRM2_01730	signal transduction family protein (GGDEF domain protein)	0	0	0	0	0	0	0	0
HRM2_01740	putative methyl-accepting chemotaxis citrate transducer (Citrate chemorecitrate transducer protein)	0	0	0	0	0	0	0	0
HRM2_01750	pstC1: phosphate ABC transporter membrane protein 1 PhoT family (TC 3.A.1.7.1)	0	0	0	0	0	0	0	0
HRM2_01760	pstA1: phosphate ABC transporter membrane protein 2 PhoT family (TC 3.A.1.7.1)	0	0	0	0	0	0	0	0
HRM2_01770	pstS1: phosphate ABC transporter substrate-binding protein, PhoT family (TC 3.A.1.7.1)	0	0	0	0	0	0	0	0
HRM2_01780	transposase (IS4 family protein)	0	0	0	0	0	0	0	0
HRM2_01790	pstS2: PstS2	0	0	0	0	0	0	0	0
HRM2_01800	pstB1: phosphate ABC transporter ATP-binding protein, PhoT family (TC 3.A.1.7.1)	0	0	0	0	0	0	0	0
HRM2_01810	phoU1: phosphate uptake regulator, PhoU	0	0	0	0	0	0	0	0
HRM2_01820	putative glycosyl transferase, group 1 family protein	0	0	0	0	0	0	0	0
HRM2_01830	ptsA1: PtsA1	0	0	0	0	0	0	0	0
HRM2_01840	signal transduction family protein (GGDEF domain protein)	0	0	0	0	0	0	0	0
HRM2_01850	RecJ-like exonuclease (DnaJ-type Zn finger protein)	0	0	0	0	0	0	0	0
HRM2_01860	hypothetical abortive infection protein	0	0	0	0	0	0	0	0
HRM2_01870	uncharacterized conserved multi-transmembrane protein	0	0	0	0	0	0	0	0
HRM2_01880	phoA: PhoA	0	0	0	0	0	0	0	0
HRM2_01890	hypothetical protein	0	0	0	0	0	0	0	0
HRM2_01900	psdD: PsdD	0	0	0	0	0	0	0	0
HRM2_01910	hypothetical protein	0	0	0	0	0	0	0	0
HRM2_01920	hypothetical protein	0	0	0	0	0	0	0	0
HRM2_01930	dksA1: DksA1	0	0	0	0	0	0	0	0
HRM2_01940	hypothetical protein	0	0	0	0	0	0	0	0
HRM2_01950	mutT family protein, putative 78-dihydro-8-oxoguanine triphosphatase (8-oxo-dGTPase)	0	0	0	0	0	0	0	0
HRM2_01960	transcriptional regulator, TetR family	0	0	0	0	0	0	0	0
HRM2_01970	predicted NADH:flavin oxidoreductase/NADH oxidase	0	0	0	0	0	0	0	0
HRM2_01980	predicted NADH:flavin oxidoreductase	0	0	0	0	0	0	0	0
HRM2_01990	nhaD1: sodium/proton antiporter, NhaD family (TC 2.A.62)	0	0	0	0	0	0	0	0
HRM2_02000	nhaR: transcriptional regulator, LysR family	0	0	0	0	0	0	0	0