Membrane protein-enriched fraction proteomics of Desulfobacterium autotrophicum HRM2

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HRM2_02010	fdx4: Fdx4	0	0	0	0	0	0	0	0
HRM2_02020	aor1: Aor1	0	0	0	0	0	0	0	0
HRM2_02030	adh3: Adh3	0	0	0	0	0	0	0	0
HRM2_02040	adh5: Adh5	0	0	0	0	0	0	0	0
HRM2_02050	hypothetical protein	0	0	3	1	0	0	3	0
HRM2_02060	hypothetical protein	0	0	0	0	0	0	0	0
HRM2_02070	hypothetical protein	0	0	0	0	0	0	0	0
HRM2_02080	hypothetical protein	0	0	0	0	0	0	0	0
HRM2_02090	inner membrane transport protein (PmrA-like protein)	0	0	0	0	0	0	0	0
HRM2_02100	predicted phosphoserine phosphatase RsbU (Sigma factor regulation protein RsbU)	0	0	0	0	0	0	0	0
HRM2_02110	predicted anti-sigma F protein (E-sigma F)	0	0	0	0	0	0	0	0
HRM2_02120	predicted anti-anti-sigma factor (ant-sigma factor regulator)	0	0	0	0	0	0	0	0
HRM2_02130	hypothetical protein	0	0	0	0	0	0	0	0
HRM2_02140	hcp1: Hcp1	0	0	0	0	0	0	0	0
HRM2_02150	helicase-family protein	0	0	0	0	0	0	0	0
HRM2_02160	putative glyoxalase/dioxygenase/bleomycin resistance protein	0	0	0	0	0	0	0	0
HRM2_02170	putative tetratricopeptide repeat protein (TPR repeat family protein)	0	0	0	0	0	0	0	0
HRM2_02180	hypothetical 5-AMP-activated protein kinase, beta-1 subunit (AMPK beta-1 chain) (AMPKb)	0	0	0	0	0	0	0	0
HRM2_02190	predicted RNA polymerase ECF-type sigma factor(extracytoplasmic function)	0	0	0	0	0	0	0	0
HRM2_02200	hypothetical protein	6	27	2	11	8	15	2	4
HRM2_02210	hypothetical protein	0	0	0	0	0	0	0	0
HRM2_02220	hypothetical protein	0	0	0	0	0	0	0	0
HRM2_02230	cobU: adenosylcobinamide kinase (EC 2.7.1.156)/adenosylcobinamide-phosphate guanylyltransferase (EC 2.7.7.62)	0	0	0	0	0	0	0	0
HRM2_02240	cobQ: adenosylcobyric acid synthase (glutamine-hydrolysing) (EC 6.3.5.10)	0	0	0	0	0	0	0	0
HRM2_02250	cobO: cob(I)yrinic acid a,c-diamide adenosyltransferase (EC 2.5.1.17)	0	0	0	0	0	0	0	0
HRM2_02260	cobJ: CobJ	0	0	0	1	0	0	0	0
HRM2_02270	cbiG: cobalt-precorrin 5A acetaldehyde-lyase (EC 3.7.1.12)	0	0	0	0	0	0	0	0
HRM2_02280	cobM: CobM	0	0	0	0	0	0	0	0
HRM2_02290	cobL: precorrin-6Y C5,15-methyltransferase (decarboxylating) (EC 2.1.1.132)	0	0	0	0	0	0	0	0
HRM2_02300	hypothetical protein	0	0	0	0	0	0	0	0
HRM2_02310	cbiL: precorrin-2 C20-methyltransferase (EC 2.1.1.130)/cobalt-factor II C20-methyltransferase (EC 2.1.1.151)	0	0	1	0	0	0	0	0
HRM2_02320	Fe(III) ABC-type transporter, periplasmic substrate-binding protein	0	0	0	0	0	0	0	0
HRM2_02330	Fe(III) ABC-type transporter, ATP-binding protein	0	0	0	0	0	0	0	0
HRM2_02340	Fe(III) ABC-type transporter, putative permease protein	0	0	0	0	0	0	0	0
HRM2_02350	putative glycogen synthase (starch [bacterial glycogen] synthase)	0	0	0	0	0	0	0	0
HRM2_02360	hypothetical protein	0	0	0	0	0	0	0	0
HRM2_02370	cobalt-zinc-cadmium resistance protein CzcA-like protein	2	0	0	0	0	0	0	0
HRM2_02380	putative membrane-fusion protein	0	0	0	0	0	0	0	0
HRM2_02390	outer membrane efflux protein	0	0	0	1	0	0	0	0
HRM2_02400	hypothetical protein	0	0	0	0	0	0	0	0
HRM2_02410	two-component hybrid sensor and response regulator histidine kinase (phoR-like protein)	0	0	0	0	0	0	0	0
HRM2_02420	two-component DNA-binding response regulator	0	0	0	0	0	0	0	0
HRM2_02430	signal transduction family protein (GGDEF domain protein)	6	0	0	0	0	1	0	3
HRM2_02440	phoU2: phosphate uptake regulator, PhoU	0	0	0	0	0	0	0	0
HRM2_02450	pstB2: phosphate ABC transporter ATP-binding protein, PhoT family (TC 3.A.1.7.1)	0	0	0	0	0	0	0	0
HRM2_02460	pstA2: phosphate ABC transporter membrane protein 2 PhoT family (TC 3.A.1.7.1)	0	0	0	0	0	0	0	0
HRM2_02470	pstC2: phosphate ABC transporter membrane protein 1 PhoT family (TC 3.A.1.7.1)	0	0	0	0	0	0	0	0
HRM2_02480	pstS3: phosphate ABC transporter substrate-binding protein, PhoT family (TC 3.A.1.7.1)	0	0	0	0	0	0	0	0
HRM2_02490	predicted anti-sigma regulatory factor RsbW1 (serine/threonine protein kinase)	0	0	0	0	0	0	0	0
HRM2_02500	putative two-component response regulator receiver protein (phosphoserine phosphatase)	0	0	0	0	0	0	0	0
HRM2_02510	HPt domain protein	0	0	0	0	0	0	0	0
HRM2_02520	putative coenzyme F420-dependent NADP oxidoreductase	0	0	0	0	0	0	0	0
HRM2_02530	panB: ketopantoate hydroxymethyltransferase (EC 2.1.2.11)	0	0	0	0	0	0	0	0
HRM2_02540	hisS: histidyl-tRNA synthetase (EC 6.1.1.21)	1	0	0	0	1	0	0	8
HRM2_02550	aspS: aspartyl-tRNA synthetase (EC 6.1.1.12)	0	0	0	0	0	0	0	0
HRM2_02560	xpt: Xpt	0	0	0	0	0	0	0	0
HRM2_02570	hypothetical protein	0	0	0	0	0	0	0	0
HRM2_02580	minE: cell division topological specificity factor MinE	0	0	0	0	0	1	3	0
HRM2_02590	minD1: septum site-determining protein MinD	0	11	10	15	13	12	5	5
HRM2_02600	minC: septum site-determining protein MinC	0	0	0	0	0	0	0	0
HRM2_02610	histidine kinase/response regulator	0	0	0	0	0	0	0	0
HRM2_02620	two component transcriptional regulator, LuxR family	0	0	0	0	0	0	0	0
HRM2_02630	putative metalloprotease	0	0	0	0	0	0	0	0
HRM2_02640	hypothetical protein	0	0	0	0	0	6	0	6
HRM2_02650	hypothetical protein	0	0	0	0	0	0	0	0
HRM2_02660	ksgA: dimethyladenosine transferase (EC 2.1.1.-)	0	0	0	0	0	0	0	0
HRM2_02670	hypothetical protein	0	0	0	0	0	0	0	0
HRM2_02680	LL-diaminopimelate aminotransferase apoenzyme (EC 2.6.1.83)	0	0	0	0	0	0	0	0
HRM2_02690	moeA1: MoeA1	0	0	0	0	0	0	0	0
HRM2_02700	moeA2: molybdopterin molybdochelatase (EC 2.10.1.1)	0	0	0	0	0	0	0	0
HRM2_02710	gltA1: citrate synthase (EC 2.3.3.1)	0	0	0	0	4	0	0	4
HRM2_02720	hypothetical protein	0	0	0	0	0	0	0	0
HRM2_02730	recN: DNA replication and repair protein RecN	0	0	0	0	0	0	0	0
HRM2_02740	putative Fe2+ transport system protein B	0	0	0	0	0	0	0	0
HRM2_02750	livF1: amino acid/amide ABC transporter ATP-binding protein 2 HAAT family (TC 3.A.1.4.-)	2	18	16	17	30	10	4	11
HRM2_02760	livG1: amino acid/amide ABC transporter ATP-binding protein 1 HAAT family (TC 3.A.1.4.-)	0	1	3	5	11	2	0	2
HRM2_02770	livM1: LivM1	0	0	0	0	0	0	0	0
HRM2_02780	livH1: amino acid/amide ABC transporter membrane protein 1 HAAT family (TC 3.A.1.4.-)	0	0	0	0	0	0	0	0
HRM2_02790	livJ1: L-leucine-binding protein/L-isoleucine-binding protein/L-valine-binding protein/amino acid/amide ABC transporter substrate-binding protein, HAAT family (TC 3.A.1.4.-)	3	5	1	8	4	2	3	0
HRM2_02800	ppnK: PpnK	0	0	0	0	0	0	0	0
HRM2_02810	hypothetical protein	0	0	0	0	0	0	0	0
HRM2_02820	hypothetical protein	0	0	0	0	0	0	0	0
HRM2_02830	fixL: FixL	0	0	0	0	0	0	0	0
HRM2_02840	hypothetical protein	0	0	0	0	0	0	0	0
HRM2_02850	predicted nitrogen fixation specific regulatory protein AnfA (transcriptional regulator, nifA-family protein)	1	0	0	0	0	0	0	0
HRM2_02860	hypothetical protein	0	0	0	0	0	0	0	0
HRM2_02870	hypothetical protein	0	0	0	0	0	0	0	0
HRM2_02880	hypothetical protein	0	0	0	0	0	0	0	0
HRM2_02890	hypothetical protein	0	0	0	0	0	0	0	0
HRM2_02900	hypothetical protein	0	0	0	0	0	0	0	0
HRM2_02910	transcriptional regulator, TetR family	0	0	0	0	0	0	0	0
HRM2_02920	molybdopterin oxidoreductase domain protein	0	0	0	0	0	0	0	0
HRM2_02930	hypothetical protein	0	0	0	0	0	0	0	0
HRM2_02940	hypothetical protein	3	0	0	0	1	0	0	0
HRM2_02950	DNA-directed RNA polymerase sigma factor	0	0	0	0	0	0	0	0
HRM2_02960	uspA9: UspA9	1	2	0	0	2	0	3	4
HRM2_02970	etfA1: electron transfer flavoprotein alpha subunit apoprotein	0	0	0	0	0	0	0	0
HRM2_02980	etfB1: electron transfer flavoprotein beta subunit	0	0	0	0	0	0	0	0
HRM2_02990	pncB: PncB	0	0	0	0	0	0	0	0
HRM2_03000	Phosphoglycerate mutase (PGAM) / bisphosphoglycerate mutase (BPGM)	0	0	0	0	0	0	0	0
HRM2_03010	acyl-CoA dehydrogenase (ACAD) / acyl-CoA oxidase-like protein	0	0	0	0	0	0	0	0
HRM2_03020	transcriptional regulator, TetR family	0	0	0	0	0	0	0	0
HRM2_03030	putative aminoglycoside phosphotransferase	0	0	0	0	0	0	0	0
HRM2_03040	3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.	0	0	0	0	0	0	0	0
HRM2_03050	fabG1: FabG1	0	0	0	0	0	0	0	0
HRM2_03060	acyl-CoA dehydrogenase family protein	0	0	0	0	0	0	0	0
HRM2_03070	nitroreductase family protein (Putative NADH dehydrogenase/NAD(P)H nitroreductase)	0	0	0	0	0	0	0	0
HRM2_03080	hypothetical protein	0	0	0	0	0	0	0	0
HRM2_03090	fabG2: FabG2	0	0	0	0	0	0	0	0
HRM2_03100	transcriptional regulator, GntR family	0	0	0	0	0	0	0	0
HRM2_03110	racD1: RacD1	0	0	0	0	0	0	0	0
HRM2_03120	endoribonuclease L-PSP	0	0	0	0	0	0	0	0
HRM2_03130	aminotransferase, DegT/DnrJ/EryC1-family protein	0	0	0	0	0	0	0	0
HRM2_03140	hisD1: HisD1	0	0	0	0	0	0	0	0
HRM2_03150	dctM1: DctM1	0	0	0	0	0	0	0	0
HRM2_03160	dctQ1: DctQ1	0	0	0	0	0	0	0	0
HRM2_03170	dctP1: DctP1	0	0	0	0	0	0	0	0
HRM2_03180	hypothetical protein	0	0	0	0	0	0	0	0
HRM2_03190	hdrF1': CoB--CoM heterodisulfide reductase subunit B	0	0	0	0	0	0	0	0
HRM2_03200	hdrF1: HdrF1	0	0	0	0	0	0	0	0
HRM2_03210	glpB1: glycerol 3-phosphate dehydrogenase (quinone) subunit B (EC 1.1.5.3)	0	0	0	0	0	0	0	0
HRM2_03220	glpA1: glycerol 3-phosphate dehydrogenase (quinone) subunit A (EC 1.1.5.3)	0	0	0	0	0	0	0	0
HRM2_03230	hypothetical protein	0	0	0	0	0	0	0	0
HRM2_03240	fadH: FadH	0	0	0	0	0	0	0	0
HRM2_03250	putative DNA-binding response regulator	0	0	0	0	0	0	0	0
HRM2_03260	gdhA1: glutamate dehydrogenase (NADP) (EC 1.4.1.4)	0	0	0	0	0	0	0	3
HRM2_03270	ppsA1: PpsA1	0	0	0	0	0	0	0	0
HRM2_03280	hypothetical protein (transmembrane family protein)	0	6	3	1	0	1	0	5
HRM2_03290	hypothetical protein	0	0	0	0	0	0	0	0
HRM2_03300	glgB1: GlgB1	5	5	0	3	0	12	8	3
HRM2_03310	putative response regulator protein (CheY-like receiver)	0	0	0	0	0	0	0	0
HRM2_03320	argT: amino acid ABC transporter substrate-binding protein, PAAT family (TC 3.A.1.3.-)	14	11	1	12	17	10	1	0
HRM2_03330	amino acid ABC transporter membrane protein 1 PAAT family (TC 3.A.1.3.-)	2	0	0	0	0	0	0	0
HRM2_03340	glnQ1: amino acid ABC transporter ATP-binding protein, PAAT family (TC 3.A.1.3.-)	0	0	0	0	0	0	0	0
HRM2_03350	glnP1: amino acid ABC transporter membrane protein 2 PAAT family (TC 3.A.1.3.-)	0	3	2	2	2	2	0	0
HRM2_03360	fdhD: FdhD	0	0	0	0	0	0	0	0
HRM2_03370	fadD1: FadD1	0	1	0	0	0	0	0	0
HRM2_03400	colR: ColR	0	0	0	0	0	0	0	0
HRM2_03410	colS: ColS	0	0	0	0	0	0	0	0
HRM2_03420	putative acetyltransferase family protein (GNAT-family protein)	0	0	0	0	0	0	0	0
HRM2_03430	fdhA2: formate dehydrogenase alpha subunit (EC 1.2.1.2)	0	0	0	0	0	0	0	0
HRM2_03440	fdhB2: FdhB2	0	0	0	0	0	0	0	0
HRM2_03450	fdhE1: FdhE1	0	0	0	0	0	0	0	0
HRM2_03460	hypothetical protein	0	0	0	0	0	0	0	0
HRM2_03470	hypothetical protein	2	0	1	0	0	2	0	0
HRM2_03480	formylmethanofuran dehydrogenase/molybdopterin biosynthesis fusion protein	0	0	0	0	0	0	0	0
HRM2_03490	predicted molybdenum transport regulatory protein ModE (HTH domain/molybdenum-binding protein)	0	0	0	0	0	0	0	0
HRM2_03500	ppsA2: PpsA2	0	0	0	0	0	0	0	0
HRM2_03510	gdhA2: GdhA2	0	0	0	0	0	0	0	0
HRM2_03520	signal transduction family protein (GGDEF domain protein)	0	0	0	0	0	0	0	0
HRM2_03530	amino acid/amide ABC transporter substrate-binding protein, HAAT family (TC 3.A.1.4.-)	0	0	0	0	0	0	0	0
HRM2_03540	ABC-type transporter, substrate-binding protein	0	0	0	0	0	0	0	0
HRM2_03550	eutC: Ethanolamine ammonia-lyase light chain (EC 4.3.1.7)	0	0	0	0	0	0	0	0
HRM2_03560	eutB: Ethanolamine ammonia-lyase heavy chain (EC 4.3.1.7)	0	0	0	0	0	0	0	0
HRM2_03570	hypothetical protein	0	0	0	0	0	0	0	0
HRM2_03580	NADH oxidase	0	0	0	0	0	0	0	0
HRM2_03590	putative 3-demethylubiquinone-9 3-methyltransferase	0	0	0	0	0	0	0	0
HRM2_03600	putative aerobic respiration control sensor protein ArcB	0	0	2	0	0	0	0	0
HRM2_03610	hypothetical protein	0	0	0	0	0	0	0	0
HRM2_03620	algI1: AlgI1	0	0	0	0	0	0	0	0
HRM2_03630	putative virulence factor (pectin lyase fold protein)	0	0	0	0	0	0	0	0
HRM2_03640	aldA: AldA	0	0	0	0	0	0	0	0
HRM2_03650	sigma-54 dependent signal transduction protein	1	0	0	0	0	0	0	0
HRM2_03660	hypothetical protein	0	0	0	0	0	0	0	0
HRM2_03670	hypothetical protein	0	0	0	1	0	0	0	0
HRM2_03680	hypothetical protein	0	0	0	0	0	0	0	0
HRM2_03700	hypothetical protein	0	0	0	0	0	0	0	0
HRM2_03710	ompA1: OmpA1	19	42	80	110	29	34	44	143
HRM2_03720	putative periplasmatic protein	5	14	10	9	7	19	21	10
HRM2_03730	putative ABC-type transporter, multidrug permease component	0	0	0	0	0	0	0	0
HRM2_03740	ABC-type transporter, ATP-binding protein	0	0	0	0	0	0	0	0
HRM2_03750	transposase (ISPsy5 family protein)	0	0	0	0	0	0	0	0
HRM2_03760	transposase protein	0	0	0	0	0	0	0	0
HRM2_03770	hypothetical protein	0	0	0	0	0	0	0	0
HRM2_03780	hypothetical protein	0	0	0	0	0	0	0	0
HRM2_03790	sigma-54 dependent transcriptional activator (PAS/PAC domain protein)	0	0	0	0	0	0	0	0
HRM2_03800	kamA1: L-lysine 2,3-aminomutase (EC 5.4.3.2)	0	0	0	0	0	0	0	0
HRM2_03810	hypothetical protein	0	0	0	0	0	0	0	0
HRM2_03820	hypothetical protein	0	0	0	0	0	0	0	0
HRM2_03830	hypothetical protein	0	0	0	0	0	0	0	0
HRM2_03840	putative DNA helicase (D10 protein)	0	0	0	0	0	0	0	0
HRM2_03850	putative ferric uptake regulation protein	0	0	0	0	0	0	0	0
HRM2_03860	putative 5-methylcytosine-specific restriction enzyme A	0	0	0	0	0	0	0	0
HRM2_03870	umuD1: UmuD1	0	0	0	0	0	0	0	0
HRM2_03880	umuC2: UmuC2	0	0	0	0	0	0	0	0
HRM2_03890	umuC3: UmuC3	0	0	0	0	0	0	0	0
HRM2_03900	DNA-directed DNA polymerase	0	0	0	0	0	0	0	0
HRM2_03910	predicted transglycosylase associated protein YeaQ	0	0	0	0	0	0	0	0
HRM2_03920	hypothetical protein	0	0	0	0	0	0	0	0
HRM2_03930	transcriptional regulator, BadM/Rrf2 family	0	0	0	0	0	0	0	0
HRM2_03940	FMN-binding protein	0	0	0	0	0	0	0	0
HRM2_03960	hypothetical protein	0	0	0	0	0	0	0	0
HRM2_03970	mltB: MltB	0	0	0	0	0	0	0	0
HRM2_03980	radA: RadA	0	0	0	0	0	0	0	0
HRM2_03990	23S rRNA Um-2552 2'-O-methyltransferase (EC 2.1.1.166)	0	0	0	0	0	0	0	0
HRM2_04000	hypothetical protein	0	0	0	0	0	0	0	0
HRM2_04010	outer membrane lipoprotein carrier protein precursor	0	0	0	0	0	0	0	0
HRM2_04020	long-chain-fatty-acid--CoA ligase (Acetyl-coenzyme A synthetase)	0	0	0	0	0	0	0	0
HRM2_04030	dnaK1: DnaK1	14	2	2	1	7	3	0	0
HRM2_04040	grpE: GrpE	0	0	0	0	0	0	0	0