Membrane protein-enriched fraction proteomics of Desulfobacterium autotrophicum HRM2

Selected Cell

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3600

HRM2_34480	cheD2: CheD2	0	0	0	0	0	0	0	0
HRM2_34490	two-component fusion protein (N:response regulator receiver-C:ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component)	0	0	0	0	0	0	0	0
HRM2_34500	sigma-54 dependent DNA-binding response regulator	0	0	0	0	0	0	0	0
HRM2_34510	hypothetical protein	0	0	0	0	0	0	0	0
HRM2_34520	hypothetical protein	0	0	0	0	0	0	0	0
HRM2_34530	rlgA2: RlgA2	0	0	0	0	0	0	0	0
HRM2_34540	TPR domain family protein	0	0	0	0	0	0	0	0
HRM2_34550	hypothetical protein	0	0	0	0	0	0	0	0
HRM2_34560	hypothetical protein	0	0	0	0	0	0	0	0
HRM2_34570	narK: NarK	0	0	0	0	0	0	0	0
HRM2_34580	guaA2: GuaA2	0	0	0	0	0	0	0	0
HRM2_34590	hypothetical protein	0	0	0	0	0	0	0	0
HRM2_34600	putative sugar (pentulose and hexulose) kinase	0	0	0	0	0	0	0	0
HRM2_34610	rbsC: monosaccharide ABC transporter membrane protein, CUT2 family (TC 3.A.1.2.-)	0	0	0	0	0	0	0	0
HRM2_34620	rbsB: monosaccharide ABC transporter substrate-binding protein, CUT2 family (TC 3.A.1.2.-)	0	0	0	0	0	0	0	0
HRM2_34630	rbsA2: monosaccharide ABC transporter ATP-binding protein, CUT2 family (TC 3.A.1.2.-)	0	0	0	0	0	0	0	0
HRM2_34640	hypothetical protein	0	0	0	0	0	0	0	0
HRM2_34650	hypothetical protein	0	0	0	0	0	0	0	0
HRM2_34660	hypothetical protein	0	0	0	0	0	0	0	0
HRM2_34670	hypothetical protein	0	0	0	0	0	0	0	0
HRM2_34680	sigma-54 dependent DNA-binding response regulator	0	0	0	0	0	0	0	0
HRM2_34690	putative iron-sulfur flavoprotein	0	0	0	0	0	0	0	0
HRM2_34700	putative 2-nitropropane dioxygenase (Nitroalkane oxidase) (2-NPD)	0	0	0	0	0	0	0	0
HRM2_34710	putative (S)-2-haloacid dehalogenase (2-haloalkanoic acid dehalogenase) (L-2-haloacid dehalogenase) (DEHC)	0	0	0	0	0	0	0	0
HRM2_34720	putative iron-sulfur flavoprotein	0	0	0	0	0	0	0	0
HRM2_34730	transposase for insertion sequences IS116, IS110 and IS902 (IS111A/IS1328/IS1533 family protein)	0	0	0	0	0	0	0	0
HRM2_34740	hypothetical protein	0	0	0	0	0	0	0	0
HRM2_34750	putative peroxiredoxin family protein	0	0	0	0	0	0	0	0
HRM2_34760	metE: MetE	0	0	0	0	0	0	0	0
HRM2_34770	putative flavodoxin family protein	0	0	0	0	0	0	0	0
HRM2_34780	hypothetical protein	0	0	0	0	0	0	0	0
HRM2_34790	hypothetical protein	0	0	0	0	0	0	0	0
HRM2_34800	transposase (IS150 family protein)	0	0	0	0	0	0	0	0
HRM2_34810	transposase (IS3/IS911 family protein)	0	0	0	0	0	0	0	0
HRM2_34820	hypothetical protein	0	0	0	0	0	0	0	0
HRM2_34830	selD2: selenophosphate synthase (EC 2.7.9.3)	0	0	0	0	0	0	0	0
HRM2_34840	hypothetical protein	0	0	0	0	0	0	0	0
HRM2_34850	iscS1: IscS1	0	0	0	0	0	0	0	0
HRM2_34870	hypothetical protein	0	0	0	0	0	0	0	0
HRM2_34910	hypothetical protein	0	0	0	0	0	0	0	0
HRM2_34920	putative lysine 2,3-aminomutase	0	0	0	0	0	0	0	0
HRM2_34930	ABC-type spermidine/putrescine transport system, ATPase component	0	4	4	5	3	0	1	6
HRM2_34940	ABC-type spermidine/putrescine transport system, periplasmic substrate-binding component	0	2	0	0	0	0	17	0
HRM2_34950	ABC-type spermidine/putrescine transport system, permease component II	1	0	3	0	0	0	0	0
HRM2_34960	ABC-type spermidine/putrescine transport system, permease component I	1	0	5	0	0	0	0	0
HRM2_34970	putative metal-dependent hydrolase (TIM-barrel fold family protein)	0	0	0	0	0	0	0	0
HRM2_34980	prdF1: proline racemase (EC 5.1.1.4)	0	0	0	0	0	0	0	0
HRM2_34990	hypothetical protein	0	0	0	0	0	0	0	0
HRM2_35000	TRAP-type C4-dicarboxylate transport system, large permease component	1	0	0	0	0	0	0	0
HRM2_35010	TRAP-type C4-dicarboxylate transport system, small permease component	0	0	0	0	0	0	0	0
HRM2_35020	TRAP-type C4-dicarboxylate transport system, periplasmic component	0	0	0	0	0	0	0	0
HRM2_35030	putative methylphosphotriester-DNA alkyltransferase	0	0	0	0	0	0	0	0
HRM2_35040	alkA: DNA-3-methyladenine glycosylase II (EC 3.2.2.21)	0	0	0	0	0	0	0	0
HRM2_35050	putative methylated-DNA--protein-cysteine methyltransferase (6-O-methylguanine-DNA methyltransferase) (MGMT) (O-6-methylguanine-DNA-alkyltransferase)	0	0	0	0	0	0	0	0
HRM2_35060	hypothetical protein	0	0	0	0	0	0	0	0
HRM2_35120	tyrS: tyrosyl-tRNA synthetase (EC 6.1.1.1)	0	0	0	0	0	0	0	0
HRM2_35130	metal dependent phosphohydrolase	33	40	89	104	49	49	15	128
HRM2_35140	hypothetical protein	0	0	0	0	0	0	0	0
HRM2_35150	predicted nucleoside-diphosphate-sugar pyrophosphorylase	0	0	0	0	0	0	0	0
HRM2_35160	atpC2: ATP synthase F1 subcomplex epsilon subunit	205	309	363	321	231	457	242	331
HRM2_35170	atpD2: ATP synthase F1 subcomplex beta subunit	64	51	54	44	45	34	9	97
HRM2_35180	atpG2: ATP synthase F1 subcomplex gamma subunit	131	252	330	298	254	264	206	179
HRM2_35190	atpA2: ATP synthase F1 subcomplex alpha subunit	29	28	34	24	18	13	2	48
HRM2_35200	atpH: ATP synthase F1 subcomplex delta subunit	76	97	104	68	82	106	33	80
HRM2_35210	atpF2: AtpF2	196	298	434	268	311	368	250	339
HRM2_35220	atpF3: AtpF3	138	211	295	194	135	240	173	140
HRM2_35230	rodA: cell elongation-specific peptidoglycan biosynthesis regulator RodA	0	0	0	0	0	0	0	0
HRM2_35240	mrdA: peptidoglycan glycosyltransferase (EC 2.4.1.129)	0	0	0	0	0	0	0	0
HRM2_35250	putative rod shape-determining protein MreD	0	0	0	0	0	0	0	0
HRM2_35260	mreC: rod shape-determining protein MreC	4	1	0	1	0	2	0	0
HRM2_35270	mreB: rod shape-determining protein MreB	28	19	17	30	24	22	13	21
HRM2_35280	putative beta-lactamase class C protein	0	0	0	0	0	0	0	0
HRM2_35290	putative microcin C7 resistance protein MccF	0	0	0	0	0	0	0	0
HRM2_35300	mnhD1: sodium/proton antiporter, NhaD family (TC 2.A.62)	65	33	87	118	54	42	32	130
HRM2_35320	putative cyclic nucleotide-binding protein	0	2	3	6	0	15	8	5
HRM2_35330	mnhA1: multisubunit sodium/proton antiporter, MrpD subunit (TC 2.A.63.1)	0	0	5	15	0	4	7	27
HRM2_35340	hypothetical protein	0	0	0	0	0	0	0	0
HRM2_35350	mnhA2: multisubunit sodium/proton antiporter, MrpD subunit (TC 2.A.63.1)	2	0	3	2	3	1	3	0
HRM2_35360	mnhD2: multisubunit sodium/proton antiporter, MrpD subunit (TC 2.A.63.1)	0	0	0	0	0	3	3	3
HRM2_35370	mnhC: multisubunit sodium/proton antiporter, MrpC subunit (TC 2.A.63.1)	0	0	0	0	0	0	2	0
HRM2_35380	mnhB: multisubunit sodium/proton antiporter, MrpB subunit (TC 2.A.63.1)	3	13	17	31	14	29	35	30
HRM2_35390	mnhG: multisubunit sodium/proton antiporter, MrpG subunit (TC 2.A.63.1)	0	0	0	0	0	0	0	0
HRM2_35400	mnhF: multisubunit sodium/proton antiporter, MrpF subunit (TC 2.A.63.1)	11	8	8	14	6	32	24	19
HRM2_35410	mnhE: multisubunit sodium/proton antiporter, MrpE subunit (TC 2.A.63.1)	1	0	0	0	0	0	11	0
HRM2_35420	peptidase (U32 family protein)	0	0	0	0	0	0	0	0
HRM2_35430	hypothetical protein	0	0	0	0	0	0	0	0
HRM2_35440	deaD: ATP-dependent RNA helicase CsdA (EC 5.99.1.-)	0	0	0	0	0	0	0	0
HRM2_35450	RNA helicase of the superfamily II	0	0	0	0	0	0	0	0
HRM2_35460	ABC transport system, ATP-binding protein	0	0	0	0	0	0	0	0
HRM2_35470	rhaT: RhaT	0	0	0	0	0	0	0	0
HRM2_35480	prfC: bacterial peptide chain release factor 3 (bRF-3)	0	0	0	0	0	0	0	0
HRM2_35490	serC: phosphoserine aminotransferase apoenzyme (EC 2.6.1.52)	0	0	0	0	0	1	0	0
HRM2_35500	serA1: D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95)	38	38	12	13	18	23	2	12
HRM2_35510	FAD-binding oxidoreductase (iron-sulfur cluster-binding domain protein)	0	0	0	0	1	0	0	0
HRM2_35520	hypothetical protein	0	0	0	0	0	0	0	0
HRM2_35530	hypothetical protein	0	0	0	0	0	0	0	2
HRM2_35540	hypothetical protein	0	0	0	0	0	0	1	0
HRM2_35550	hypothetical protein	0	0	0	0	0	0	0	0
HRM2_35560	hypothetical protein	0	0	0	0	0	0	0	0
HRM2_35570	hypothetical protein	3	0	5	7	1	1	0	2
HRM2_35580	mglA: MglA	3	0	0	0	0	0	3	0
HRM2_35590	mglB: MglB	0	0	0	0	0	0	0	0
HRM2_35600	hypothetical protein	0	0	0	0	0	0	0	0
HRM2_35610	permease of the drug/metabolite transporter (DMT) superfamily	0	0	0	0	0	0	0	0
HRM2_35620	hypothetical protein	0	0	0	0	0	0	0	0
HRM2_35630	hypothetical protein	0	0	0	0	0	0	0	0
HRM2_35640	usp2: Usp2	0	0	0	0	0	0	0	0
HRM2_35650	etfA2: electron transfer flavoprotein alpha subunit apoprotein	0	5	0	0	0	0	2	0
HRM2_35660	etfB2: electron transfer flavoprotein beta subunit	0	0	0	0	0	0	0	0
HRM2_35670	hdrF3: HdrF3	41	77	32	18	36	17	177	11
HRM2_35680	transcriptional regulator, TetR family	0	0	0	0	0	0	0	0
HRM2_35690	putative ketose-bisphosphate aldolase family protein	0	0	0	0	0	0	0	0
HRM2_35700	hypothetical protein	0	0	0	0	0	0	0	0
HRM2_35710	flgM: anti-sigma-28 factor, FlgM family	0	1	0	0	0	2	0	0
HRM2_35720	putative methyl-accepting chemotaxis protein	0	0	0	0	0	3	0	0
HRM2_35730	hisF1: imidazole glycerol phosphate synthase subunit hisF (EC 4.1.3.-)	0	0	0	0	0	0	0	0
HRM2_35740	hisH1: imidazole glycerol phosphate synthase subunit hisH (EC 2.4.2.-)	0	0	0	0	0	0	0	0
HRM2_35750	tetrapyrrole methylase family protein (MazG family protein)	0	0	0	0	0	0	0	0
HRM2_35760	putative colicin V production protein-like protein	0	0	0	0	0	0	0	0
HRM2_35770	phoH1: PhoH1	0	3	0	2	2	0	0	0
HRM2_35780	metal dependent phosphohydrolase	9	6	3	2	2	2	2	1
HRM2_35790	hypothetical protein	0	0	0	0	0	0	0	0
HRM2_35800	pdxJ: pyridoxine 5'-phosphate synthase (EC 2.6.99.2)	0	0	0	0	0	0	0	0
HRM2_35810	truC: tRNA pseudouridine synthase C (EC 5.4.99.-)	0	0	0	0	0	0	0	0
HRM2_35820	hypothetical protein	0	0	0	0	0	0	0	0
HRM2_35830	putative metallo-beta-lactamase superfamily protein	2	1	0	0	0	0	0	2
HRM2_35840	hypothetical protein	0	0	0	0	0	0	0	0
HRM2_35850	hypothetical protein	0	0	0	0	0	0	0	1
HRM2_35860	hypothetical protein	0	0	0	0	0	0	0	0
HRM2_35870	lysC: aspartate kinase (EC 2.7.2.4)	16	10	14	0	14	22	4	8
HRM2_35880	pyrF: orotidine-5'-phosphate decarboxylase (EC 4.1.1.23)	0	0	0	0	0	0	0	0
HRM2_35890	cheD3: CheD3	0	0	0	0	0	0	0	0
HRM2_35900	selA: L-seryl-tRNA(Sec) selenium transferase (EC 2.9.1.1)	0	0	0	0	0	0	0	0
HRM2_35910	TPR repeat domain family protein	0	0	0	0	0	0	0	0
HRM2_35920	gmhA: phosphoheptose isomerase (EC 5.3.1.-)	0	0	0	0	0	0	0	0
HRM2_35930	hypothetical protein	0	0	0	0	0	0	0	0
HRM2_35940	hypothetical protein	0	0	0	0	0	0	0	0
HRM2_35950	hemC: hydroxymethylbilane synthase (EC 2.5.1.61)	0	0	0	0	0	0	0	0
HRM2_35960	hemD: uroporphyrinogen-III synthase (EC 4.2.1.75)/uroporphyrinogen-III C-methyltransferase (EC 2.1.1.107)	0	0	0	0	0	0	0	0
HRM2_35970	moaA2: cyclic pyranopterin monophosphate synthase subunit MoaA (EC 4.1.99.18)	0	0	0	0	0	0	0	0
HRM2_35980	putative reponse regulator (CheY and GGDEF domain family protein)	0	0	0	0	0	0	0	0
HRM2_35990	rplQ: LSU ribosomal protein L17P	118	75	105	158	111	116	45	32
HRM2_36000	rpoA: DNA-directed RNA polymerase subunit alpha (EC 2.7.7.6)	0	0	0	0	1	0	0	0
HRM2_36010	rpsD: SSU ribosomal protein S4P	304	478	622	604	577	497	206	173
HRM2_36020	rpsK: SSU ribosomal protein S11P	10	16	0	16	15	0	0	8
HRM2_36030	rpsM: RpsM	204	142	203	169	199	253	93	116
HRM2_36040	rpmJ: LSU ribosomal protein L36P	0	0	0	0	0	0	0	0
HRM2_36050	infA: bacterial translation initiation factor 1 (bIF-1)	0	0	0	0	0	0	0	0
HRM2_36060	secY: protein translocase subunit secY/sec61 alpha	31	46	65	54	72	51	18	12
HRM2_36070	rplO: LSU ribosomal protein L15P	76	48	74	65	84	51	17	14
HRM2_36080	rpmD: LSU ribosomal protein L30P	44	26	22	26	28	43	16	8
HRM2_36090	rpsE: SSU ribosomal protein S5P	40	34	19	25	75	49	38	18
HRM2_36100	rplR: LSU ribosomal protein L18P	37	23	23	20	35	38	6	9
HRM2_36110	rplF: LSU ribosomal protein L6P	2	1	4	4	8	4	0	0
HRM2_36120	rpsH: SSU ribosomal protein S8P	0	0	2	1	5	2	1	0
HRM2_36130	rpsN: SSU ribosomal protein S14P	10	15	18	21	10	20	8	6
HRM2_36140	rplE: RplE	56	40	77	74	164	58	11	19
HRM2_36150	rplX: LSU ribosomal protein L24P	1	0	0	0	0	0	0	1
HRM2_36160	rplN: LSU ribosomal protein L14P	5	2	5	2	11	8	2	2
HRM2_36170	rpsQ: RpsQ	1	0	0	0	4	4	7	3
HRM2_36180	rpmC: LSU ribosomal protein L29P	0	0	0	0	0	0	0	0
HRM2_36190	rplP: LSU ribosomal protein L16P	94	49	87	127	93	104	19	25
HRM2_36200	rpsC: SSU ribosomal protein S3P	92	67	98	139	115	87	7	20
HRM2_36210	rplV: LSU ribosomal protein L22P	144	77	81	103	119	136	37	26
HRM2_36220	rpsS: SSU ribosomal protein S19P	0	0	0	0	0	9	0	3
HRM2_36230	rplB: RplB	206	259	263	291	360	237	89	116
HRM2_36240	rplW: LSU ribosomal protein L23P	134	113	76	102	141	194	70	52
HRM2_36250	rplD: LSU ribosomal protein L4P	261	378	356	379	564	502	148	240
HRM2_36260	rplC: LSU ribosomal protein L3P	89	119	94	91	221	140	41	55
HRM2_36270	rpsJ: SSU ribosomal protein S10P	17	14	12	18	26	30	12	18
HRM2_36280	tufA: translation elongation factor 1A (EF-1A/EF-Tu)	28	0	0	0	13	4	0	5
HRM2_36290	rpsG: SSU ribosomal protein S7P	285	188	271	301	294	300	113	93
HRM2_36300	rpsL: SSU ribosomal protein S12P	79	61	48	41	63	76	33	41
HRM2_36310	rpoC: DNA-directed RNA polymerase subunit beta' (EC 2.7.7.6)	6	0	1	1	4	2	3	0
HRM2_36320	rpoB: DNA-directed RNA polymerase subunit beta (EC 2.7.7.6)	1	0	0	0	0	0	0	0
HRM2_36330	rplL: LSU ribosomal protein L12P	2	0	2	4	3	4	1	1
HRM2_36340	rplJ: LSU ribosomal protein L10P	0	0	0	0	9	0	0	0
HRM2_36350	rplA: LSU ribosomal protein L1P	1	0	0	5	16	0	0	0
HRM2_36360	rplK: LSU ribosomal protein L11P	2	4	4	2	16	3	7	0
HRM2_36370	nusG: transcription antitermination protein nusG	0	0	0	0	0	0	0	0
HRM2_36380	secE: SecE	32	27	29	44	41	53	28	25
HRM2_36400	rpmG: LSU ribosomal protein L33P	0	0	0	0	0	0	0	0
HRM2_36410	tuf: translation elongation factor 1A (EF-1A/EF-Tu)	2	4	0	0	0	0	0	0
HRM2_36440	hypothetical protein	0	0	0	0	0	0	0	0
HRM2_36470	mltD2: MltD2	0	0	2	1	0	0	0	0
HRM2_36490	peptidase (U32 family protein)	0	0	0	0	0	0	0	0
HRM2_36500	cheA2: CheA2	7	3	5	3	0	1	0	0
HRM2_36510	cheW2: CheW2	0	0	0	0	0	0	0	0
HRM2_36520	cheB2: CheB2	0	0	1	0	0	0	0	0
HRM2_36530	cheR2: CheR2	0	0	0	0	0	0	0	0
HRM2_36540	putative signal transduction protein	0	0	0	0	0	0	0	0
HRM2_36550	hypothetical protein	0	0	0	0	0	0	0	0
HRM2_36560	pgk: phosphoglycerate kinase (EC 2.7.2.3)	0	0	0	0	0	0	0	0
HRM2_36570	hypothetical protein	0	0	0	0	0	0	0	0
HRM2_36580	radC3: RadC3	0	0	0	0	0	0	0	0
HRM2_36590	gyrA: GyrA	1	0	0	0	0	0	0	0
HRM2_36600	putative permease	0	0	0	0	0	0	0	0
HRM2_36610	atoB3: acetyl-CoA acetyltransferase (EC 2.3.1.9)	6	0	0	15	0	7	0	7
HRM2_36620	hypothetical protein	0	0	0	0	0	0	0	0
HRM2_36630	putative ATPase	0	0	0	0	0	0	0	0