Membrane protein-enriched fraction proteomics of Desulfobacterium autotrophicum HRM2

Selected Cell

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Sheet1

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3200

HRM2_30400	lon4: Lon4	23	2	11	24	25	7	0	3
HRM2_30410	pilD: type 4 prepilin peptidase 1 (EC:3.4.23.43). Aspartic peptidase. MEROPS family A24A	0	0	0	0	0	0	0	0
HRM2_30420	cheX1: CheX1	0	0	0	0	0	0	0	0
HRM2_30430	hbp: Hbp	32	0	11	14	0	38	35	50
HRM2_30440	hypothetical protein	0	0	0	0	0	0	0	0
HRM2_30450	sbcB: Exodeoxyribonuclease I subunit C (EC 3.1.11.1)	0	0	0	0	0	0	0	0
HRM2_30460	rpsI: SSU ribosomal protein S9P	147	94	44	69	106	208	75	64
HRM2_30470	rplM: LSU ribosomal protein L13P	0	0	0	0	0	0	0	0
HRM2_30480	hypothetical protein	0	0	0	0	0	0	0	0
HRM2_30490	hypothetical protein	0	0	1	0	1	0	1	0
HRM2_30500	putative ErfK family protein (precursor)	0	0	0	0	0	0	0	0
HRM2_30510	ruvB: Holliday junction DNA helicase subunit RuvB	0	0	0	0	0	0	0	0
HRM2_30520	ruvA: Holliday junction DNA helicase subunit RuvA	0	0	0	0	0	0	0	0
HRM2_30530	ruvC: Holliday junction endonuclease RuvC (EC 3.1.22.4)	0	0	0	0	0	0	0	0
HRM2_30540	putative aspartyl/asparaginyl beta-hydroxylase (Aspartate beta-hydroxylase) (Peptide-aspartate beta-dioxygenase)	27	96	79	104	97	64	54	25
HRM2_30550	pal: Pal	459	552	567	600	598	614	303	280
HRM2_30560	aglW: AglW	0	0	0	0	0	0	0	0
HRM2_30570	Cell division and transport-associated protein TolA (TC 2.C.1.2.1)	0	0	1	1	0	0	0	2
HRM2_30580	tolR: Cell division and transport-associated protein TolR (TC 2.C.1.2.1)	4	5	6	6	8	5	4	2
HRM2_30590	tolQ1: Cell division and transport-associated protein TolQ (TC 2.C.1.2.1)	3	2	1	1	4	0	4	0
HRM2_30600	groEL: GroEL	168	73	42	54	132	68	18	67
HRM2_30610	groES: GroES	0	0	0	0	0	0	0	0
HRM2_30620	putative FmdB family protein (regulatory protein)	0	0	0	0	0	0	0	0
HRM2_30630	hypothetical protein	0	0	0	0	0	0	0	0
HRM2_30640	hypothetical protein	0	0	0	0	0	0	0	0
HRM2_30650	hflC: protease FtsH subunit HflC	65	107	155	136	203	97	67	55
HRM2_30660	hflK: protease FtsH subunit HflK	7	11	33	44	12	11	8	47
HRM2_30670	transposase (IS4 element)	0	0	0	0	0	0	0	0
HRM2_30680	hypothetical protein	0	0	0	0	0	0	0	0
HRM2_30690	hisK: HisK	0	0	0	0	0	0	0	0
HRM2_30700	trmH2: TrmH2	0	0	0	0	0	0	0	0
HRM2_30710	ftn: Ftn	0	0	0	0	0	0	1	0
HRM2_30720	fdx7: Fdx7	0	0	0	0	0	0	0	0
HRM2_30730	fdx8: Fdx8	0	0	0	0	0	0	0	0
HRM2_30740	glcD4: GlcD4	3	8	0	4	0	3	4	2
HRM2_30750	putative fusion protein GlcF/heterodisulfide reductase HdrA	0	0	0	0	0	0	0	0
HRM2_30760	hypothetical protein	2	0	0	0	0	0	0	2
HRM2_30770	putative fusion protein, heterodisulfide reductase (HdrA) / F420-non-reducing hydrogenase (MvhD)	0	0	0	1	0	3	0	0
HRM2_30780	putative fusion protein, heterodisulfide reductase (HdrA) / ferredoxin (iron-sulfur-binding protein)	0	0	0	0	0	0	0	0
HRM2_30790	metF2: 5,10-methylenetetrahydrofolate reductase (ferredoxin) (EC 1.5.7.1)	6	6	8	11	13	6	19	5
HRM2_30800	putative zinc-finger protein	0	0	0	0	0	0	0	0
HRM2_30810	predicted two-component sensor histidine kinase	0	0	0	0	0	0	0	0
HRM2_30820	predicted two-component response regulator	0	0	0	0	0	0	0	0
HRM2_30830	aroE2: AroE2	0	0	0	0	0	0	0	0
HRM2_30840	phoR: PAS/PAC sensor hybrid histidine kinase (EC 2.7.13.3)	0	0	0	0	0	0	0	0
HRM2_30850	flgG1: FlgG1	0	0	0	0	0	0	0	0
HRM2_30860	metF3: 5,10-methylenetetrahydrofolate reductase (ferredoxin) (EC 1.5.7.1)	0	0	0	0	0	0	0	0
HRM2_30870	putative zinc-finger protein	0	0	0	0	0	0	0	0
HRM2_30880	mvhD7: F420-non-reducing hydrogenase subunit D	0	0	0	0	0	0	0	0
HRM2_30890	hdrL3: HdrL3	0	1	0	0	0	0	0	0
HRM2_30900	metF4: MetF4	0	0	0	2	0	0	0	0
HRM2_30910	histidine kinase (EC 2.7.13.3)	0	0	0	0	0	0	0	0
HRM2_30920	parA: ParA	0	0	0	0	0	0	0	0
HRM2_30930	putative tetrapyrrole (corrin/porphyrin) methylase	0	0	0	0	0	0	0	0
HRM2_30940	putative archaeal-type Holliday junction resolvase	0	0	0	0	0	0	0	0
HRM2_30950	rnhB: RNase HII (EC 3.1.26.4)	0	0	0	0	0	0	0	0
HRM2_30960	rplS: LSU ribosomal protein L19P	198	137	189	197	217	197	54	62
HRM2_30970	hypothetical protein	0	0	0	0	0	0	0	0
HRM2_30980	trmD: tRNA (Guanine37-N(1)-) methyltransferase (EC 2.1.1.31)	0	0	0	0	0	0	0	0
HRM2_30990	rimM: RimM	0	0	0	0	0	0	0	0
HRM2_31000	RNA-binding protein (KH domain)	0	0	0	0	0	0	0	0
HRM2_31010	rpsP: SSU ribosomal protein S16P	1	3	0	2	0	3	1	0
HRM2_31020	ffh: signal recognition particle subunit FFH/SRP54 (srp54)	0	0	0	4	0	0	0	3
HRM2_31030	23S rRNA m(2)A-2503 methyltransferase (EC 2.1.1.192)	0	0	0	0	0	0	0	0
HRM2_31040	putative tRNA, (5-methylaminomethyl-2-thiouridylate)-methyltransferase	0	0	0	0	0	0	0	0
HRM2_31050	hypothetical protein	0	0	0	0	0	0	0	0
HRM2_31060		0	0	0	0	0	0	0	0
HRM2_31070	ntrB: NtrB	0	0	0	0	0	0	0	0
HRM2_31080	ntrA: NtrA	0	0	0	0	0	0	0	0
HRM2_31090	ntrC2: NtrC2	0	0	0	0	0	0	0	0
HRM2_31100	predicted ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component	0	0	0	0	0	0	0	0
HRM2_31110	ubiB2: 2-octaprenylphenol hydroxylase (EC 1.14.13.-)	0	0	0	0	0	0	0	0
HRM2_31120	hypothetical protein	0	4	1	0	1	4	1	0
HRM2_31130	acd10: Acd10	0	0	0	0	0	0	0	0
HRM2_31140	putative hydantoinase/oxoprolinase family protein	0	0	0	0	0	0	0	0
HRM2_31150	putative histone deacetylase family protein	0	0	0	0	0	0	0	0
HRM2_31160	lysS2: LysS2	0	0	0	0	0	0	0	0
HRM2_31170	hypothetical protein	0	0	0	0	0	0	0	0
HRM2_31180	sat2: sulfate adenylyltransferase (EC 2.7.7.4)	85	55	18	0	41	35	12	26
HRM2_31190	putative HAD-superfamily hydrolase (subfamily IA protein)	0	0	0	0	0	0	0	0
HRM2_31200	hypothetical protein	0	0	0	0	0	0	0	0
HRM2_31210	hypothetical protein	0	0	0	0	0	0	0	0
HRM2_31220	putative metallo-beta-lactamase family protein	0	0	0	0	0	0	0	0
HRM2_31230	nusB: NusB antitermination factor	0	0	0	0	0	0	0	0
HRM2_31240	ribH: 6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.78)	18	1	14	6	32	25	11	3
HRM2_31250	ribAB: GTP cyclohydrolase II (EC 3.5.4.25)/3,4-dihydroxy-2-butanone 4-phosphate synthase (EC 4.1.99.12)	0	0	0	0	2	0	0	0
HRM2_31260	ribE: riboflavin synthase alpha chain (EC 2.5.1.9)	0	0	0	0	0	0	0	0
HRM2_31270	ribD: diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26)/5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193)	0	0	0	0	0	0	0	0
HRM2_31280	hypothetical protein	0	0	0	0	0	0	0	0
HRM2_31290	hypothetical protein	0	0	0	0	0	0	0	0
HRM2_31300	glyA: GlyA	0	0	0	0	0	0	0	0
HRM2_31310	rpiB: RpiB	1	5	2	0	4	4	3	0
HRM2_31320	acpP: AcpP	0	0	0	0	0	0	0	0
HRM2_31330	rpmF: RpmF	0	0	0	0	0	5	0	0
HRM2_31340	gltX: glutamyl-tRNA synthetase (EC 6.1.1.17)	22	2	10	5	13	8	1	11
HRM2_31350	putative dioxygenase	0	0	0	0	0	0	0	0
HRM2_31360	hypB: Hydrogenase nickel incorporation protein HypB	0	0	0	0	0	0	0	0
HRM2_31370	hypA: Hydrogenase-3 nickel incorporation protein HypA	0	0	0	0	0	0	0	0
HRM2_31380	putative aspartate/tyrosine/aromatic acid aminotransferase	0	0	0	0	0	0	0	0
HRM2_31390	tgt: tRNA-guanine transglycosylase (EC 2.4.2.29)	0	0	0	0	0	0	0	0
HRM2_31400	queA: S-adenosylmethionine--tRNA ribosyltransferase-isomerase	0	0	0	0	0	0	0	0
HRM2_31410	hypothetical protein	0	0	0	0	0	0	0	0
HRM2_31420	gatB: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B (EC 6.3.5.-)	0	0	0	0	0	0	0	0
HRM2_31430	hypothetical protein	0	0	0	0	0	0	0	0
HRM2_31440	hypothetical protein	18	3	13	0	17	0	114	41
HRM2_31450	hypothetical protein	95	141	152	88	66	116	34	196
HRM2_31460	hypothetical protein	0	0	0	0	0	0	0	0
HRM2_31470	hypothetical protein	1278	1888	2870	2361	2121	2329	2049	3263
HRM2_31480	hypothetical protein	0	0	0	0	0	0	0	0
HRM2_31490	hypothetical protein	0	0	0	0	0	0	0	0
HRM2_31500	mutL: DNA mismatch repair protein MutL	0	0	0	1	0	0	0	0
HRM2_31510	hypothetical protein	0	0	0	0	0	0	0	0
HRM2_31520	gatA2: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A (EC 6.3.5.-)	0	0	0	0	0	0	0	0
HRM2_31530	gatC: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C (EC 6.3.5.-)	0	0	0	0	0	0	0	0
HRM2_31540	hypothetical protein	0	0	0	0	0	0	0	0
HRM2_31550	argS: arginyl-tRNA synthetase (EC 6.1.1.19)	0	0	0	0	0	0	0	0
HRM2_31560	hypothetical protein	0	0	0	0	0	0	0	0
HRM2_31590	hypothetical protein	0	0	0	0	0	0	0	0
HRM2_31600	pgi: glucose-6-phosphate isomerase (EC 5.3.1.9)	0	0	0	0	0	0	0	0
HRM2_31610	hypothetical protein	0	0	0	0	0	0	0	0
HRM2_31620	putative aspartyl aminopeptidase	0	0	0	0	0	0	0	2
HRM2_31630	hypothetical protein	0	0	0	0	0	0	1	1
HRM2_31640	hmeC: putative sulfite reductase-associated electron transfer protein DsrM	200	362	354	363	429	377	302	220
HRM2_31650	hmeD: putative sulfite reductase-associated electron transfer protein DsrK	113	113	167	161	77	105	43	167
HRM2_31660	hmeE1: putative sulfite reductase-associated electron transfer protein DsrJ	0	0	0	0	0	0	0	0
HRM2_31670	hmeE2: putative sulfite reductase-associated electron transfer protein DsrO	108	191	249	269	215	261	121	62
HRM2_31680	hmeB: putative sulfite reductase-associated electron transfer protein DsrP	30	112	103	102	76	95	47	38
HRM2_31690	hypothetical protein	0	0	0	0	0	0	0	0
HRM2_31700	rplU: LSU ribosomal protein L21P	0	0	0	0	0	0	0	0
HRM2_31710	rpmA: LSU ribosomal protein L27P	5	9	7	4	8	11	14	11
HRM2_31720	putative GTP-binding protein	0	0	0	0	0	0	0	0
HRM2_31730	proB: ProB	0	0	0	0	0	0	0	0
HRM2_31740	proA: glutamate-5-semialdehyde dehydrogenase (EC 1.2.1.41)	0	0	0	0	0	0	0	0
HRM2_31750	nicotinate-nucleotide adenylyltransferase (EC 2.7.7.18)	0	0	0	0	0	0	0	0
HRM2_31760	putative iojap-related protein	0	0	0	0	0	0	0	0
HRM2_31770	gpmA2: phosphoglycerate mutase (EC 5.4.2.1)	0	0	0	0	0	0	0	0
HRM2_31780	hypothetical protein	0	0	0	0	0	0	0	0
HRM2_31790	hypothetical protein	0	0	0	0	0	0	0	0
HRM2_31800	pcb: Pcb	5	0	0	4	3	3	0	0
HRM2_31810	hypothetical protein	0	0	0	0	0	0	0	0
HRM2_31820	pccB: PccB	0	0	0	0	0	0	0	0
HRM2_31830	coaE: dephospho-CoA kinase (EC 2.7.1.24)	0	0	0	0	0	0	0	0
HRM2_31840	hypothetical protein	0	0	0	0	0	0	0	0
HRM2_31850	fusA4: FusA4	1	1	0	0	0	0	0	0
HRM2_31860	TPR domain family protein	0	0	0	0	0	0	0	0
HRM2_31870	putative chromosome partitioning protein ParA	0	0	0	0	0	0	0	0
HRM2_31880	putative chromosome partitioning protein ParB	3	0	0	0	0	0	0	0
HRM2_31890	ispH: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC 1.17.1.2)	0	0	0	0	0	0	0	0
HRM2_31900	hypothetical protein	0	0	0	0	0	0	0	0
HRM2_31910	putative 1-acyl-sn-glycerol-3-phosphate acyltransferase	0	0	0	2	0	0	0	0
HRM2_31920	sigma-54 dependent transcriptional regulator	0	0	0	0	0	0	0	0
HRM2_31930	predicted polyketide synthase	196	8	27	51	102	70	0	2
HRM2_31940	putative phosphopantetheinyl transferase	0	0	0	0	0	0	0	0
HRM2_31950	hypothetical protein	0	0	0	0	0	0	0	0
HRM2_31960	pncA: PncA	0	0	0	0	0	0	0	0
HRM2_31970	two-component response regulator	0	0	0	0	0	0	0	0
HRM2_31980	two-component sensor histidine kinase	0	0	0	0	0	0	0	0
HRM2_31990	predicted fusion protein, response regulator receiver (N-terminal) / sensor histidine kinase PAS/PAC (C-terminal)	0	0	0	0	0	0	0	0
HRM2_32000	predicted fusion protein, sensory box response regulator (N-terminal) / CheY-like response regulator receiver (C-terminal)	0	0	0	0	0	0	0	0
HRM2_32010	hypothetical protein	0	0	0	0	0	0	0	0
HRM2_32030	hypothetical protein	0	0	0	0	0	0	0	0
HRM2_32040	hypothetical protein	0	0	0	0	0	0	0	0
HRM2_32050	sigE: positive regulator of sigma(E), RseC/MucC	0	0	0	0	0	0	0	0
HRM2_32060	cytochrome c, class III family protein	0	0	0	0	0	0	0	0
HRM2_32070	rnfC2: RnfC2	113	153	273	254	75	179	161	321
HRM2_32080	rnfD2: RnfD2	26	43	37	51	32	56	45	25
HRM2_32090	rnfG2: RnfG2	56	89	67	74	27	121	117	87
HRM2_32100	rnfE2: RnfE2	45	0	0	0	43	105	0	46
HRM2_32110	rnfA2: RnfA2	0	0	0	0	0	0	0	0
HRM2_32120	putative NADPH-dependent glutamate synthase	83	108	47	53	27	65	84	34
HRM2_32130	putative cAMP-dependent protein kinase, regulatory subunit	4	16	8	9	4	11	21	7
HRM2_32140	apbE: ApbE	0	0	0	0	0	0	0	0
HRM2_32150	predicted Fe-S oxidoreductase	0	0	0	0	0	0	0	0
HRM2_32160	gidA: GidA	0	0	0	0	0	0	0	0
HRM2_32170	dnaJ5: DnaJ5	0	0	0	5	1	0	0	0
HRM2_32180	hpt: Hpt	0	0	0	0	0	0	0	0
HRM2_32190	putative ATPase	31	21	16	19	11	16	19	12
HRM2_32210	predicted alpha/beta hydrolase	0	0	0	0	0	0	0	0
HRM2_32220	diguanylate cyclase (GGDEF) domain protein	0	0	1	0	0	0	0	0
HRM2_32230	hypothetical protein	0	0	0	0	0	0	0	0
HRM2_32240	hypothetical protein	0	0	0	0	0	0	0	0
HRM2_32250	hypothetical protein	0	0	0	0	0	0	0	0
HRM2_32260	predicted glycosyltransferase	0	0	0	0	0	0	0	0
HRM2_32270	rnhA2: RnhA2	0	0	0	0	0	0	0	0
HRM2_32280	major facilitator family protein	0	0	0	0	0	0	0	0
HRM2_32290	hypothetical protein	0	0	0	0	0	0	0	0
HRM2_32300	putative ketopantoate reductase	0	0	0	0	0	0	0	0
HRM2_32310	hypothetical protein	0	0	0	0	0	0	0	0
HRM2_32320	putative fusion protein, conserved hypothetical protein (N-terminal) / apoptosis inhibitory protein 5-related protein (C-terminal)	0	0	0	0	0	0	0	0
HRM2_32330	hypothetical protein	0	0	0	0	0	0	0	0
HRM2_32340	ligA2: LigA2	0	0	0	0	0	0	0	0
HRM2_32350	hypothetical protein	0	1	0	2	0	0	0	5
HRM2_32360	gltB2: GltB2	0	0	0	0	0	0	0	0
HRM2_32370	gltD2: glutamate synthase (NADPH) small subunit (EC 1.4.1.13)	0	0	0	0	0	0	0	0
HRM2_32380	hypothetical protein	0	0	0	0	0	0	0	0
HRM2_32390	glk: glucokinase (EC 2.7.1.2)	0	0	0	0	0	0	0	0
HRM2_32400	fumA: fumarase, class I, homodimeric (EC 4.2.1.2)	0	0	0	0	0	0	0	0
HRM2_32410	sdhB: succinate dehydrogenase subunit B (EC 1.3.5.1)	10	56	39	60	61	18	46	39
HRM2_32420	sdhA: SdhA	186	181	63	73	84	44	97	149
HRM2_32430	sdhC: succinate dehydrogenase subunit C (EC 1.3.5.1)	37	57	74	101	76	55	53	67