Shotgun proteomics data of Desulfobacterium autotrophicum HRM2

Selected Cell

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HRM2_36330	rplL: LSU ribosomal protein L12P	198	95	137	149	204	142	119	89
HRM2_30470	rplM: LSU ribosomal protein L13P	11	0	2	0	22	13	0	3
HRM2_36160	rplN: LSU ribosomal protein L14P	9	1	5	10	21	13	1	2
HRM2_36070	rplO: LSU ribosomal protein L15P	11	6	3	0	8	7	0	2
HRM2_36190	rplP: LSU ribosomal protein L16P	0	0	0	0	0	0	0	0
HRM2_35990	rplQ: LSU ribosomal protein L17P	0	0	0	0	0	0	0	0
HRM2_36100	rplR: LSU ribosomal protein L18P	0	0	0	0	0	0	0	0
HRM2_30960	rplS: LSU ribosomal protein L19P	8	2	5	5	7	9	3	2
HRM2_04600	rplT: LSU ribosomal protein L20P	4	2	2	5	12	7	0	0
HRM2_31700	rplU: LSU ribosomal protein L21P	0	0	3	0	6	0	0	0
HRM2_36210	rplV: LSU ribosomal protein L22P	5	5	0	0	9	4	0	2
HRM2_36240	rplW: LSU ribosomal protein L23P	11	1	0	3	9	0	0	2
HRM2_36150	rplX: LSU ribosomal protein L24P	4	1	2	5	0	5	0	0
HRM2_16820	rplY: LSU ribosomal protein L25P	90	39	53	88	73	70	42	26
HRM2_31710	rpmA: LSU ribosomal protein L27P	8	0	2	3	6	2	0	1
HRM2_12300	rpmB: LSU ribosomal protein L28P	0	0	0	0	0	0	0	0
HRM2_36180	rpmC: LSU ribosomal protein L29P	21	8	10	25	23	17	10	0
HRM2_36080	rpmD: LSU ribosomal protein L30P	0	0	0	0	0	0	0	0
HRM2_17070	rpmE: LSU ribosomal protein L31P	10	0	2	0	14	6	1	0
HRM2_31330	rpmF: RpmF	10	0	2	2	10	12	0	0
HRM2_36400	rpmG: LSU ribosomal protein L33P	11	3	1	7	12	10	0	0
HRM2_06700	rpmH: LSU ribosomal protein L34P	0	0	0	0	0	0	0	0
HRM2_04590	rpmI: LSU ribosomal protein L35P	0	3	4	5	8	6	0	3
HRM2_36040	rpmJ: LSU ribosomal protein L36P	0	0	0	0	0	0	0	0
HRM2_36000	rpoA: DNA-directed RNA polymerase subunit alpha (EC 2.7.7.6)	56	27	16	48	47	45	23	18
HRM2_36320	rpoB: DNA-directed RNA polymerase subunit beta (EC 2.7.7.6)	36	9	18	5	41	31	3	16
HRM2_36310	rpoC: DNA-directed RNA polymerase subunit beta' (EC 2.7.7.6)	13	11	6	0	10	16	8	10
HRM2_29380	rpoD: RNA polymerase, sigma 70 subunit, RpoD	0	0	0	0	0	0	0	0
HRM2_05770	rpoE: RNA polymerase, sigma subunit, ECF family 650892:6514	0	0	0	0	0	0	0	0
HRM2_24040	rpoH: RNA polymerase, sigma 32 subunit, RpoH	0	0	0	0	0	0	0	0
HRM2_27870	rpoN: RNA polymerase, sigma 54 subunit, RpoN/SigL	0	0	0	0	0	0	0	0
HRM2_30360	rpoZ: DNA-directed RNA polymerase subunit omega (EC 2.7.7.6)	0	0	0	0	0	0	0	0
HRM2_12390	rpsA1: SSU ribosomal protein S1P	7	4	9	16	28	20	13	3
HRM2_24770	rpsA2: SSU ribosomal protein S1P	162	40	26	91	140	110	52	8
HRM2_17100	rpsB: SSU ribosomal protein S2P	75	11	50	76	91	78	4	11
HRM2_36200	rpsC: SSU ribosomal protein S3P	18	8	5	4	28	17	0	4
HRM2_36010	rpsD: SSU ribosomal protein S4P	16	10	18	11	20	12	2	0
HRM2_36090	rpsE: SSU ribosomal protein S5P	72	24	43	46	70	51	22	25
HRM2_18640	rpsF: SSU ribosomal protein S6P	62	22	30	60	95	33	41	16
HRM2_36290	rpsG: SSU ribosomal protein S7P	14	3	5	4	22	12	0	0
HRM2_36120	rpsH: SSU ribosomal protein S8P	23	0	11	1	18	11	0	5
HRM2_30460	rpsI: SSU ribosomal protein S9P	24	4	13	14	27	23	0	7
HRM2_36270	rpsJ: SSU ribosomal protein S10P	25	3	14	13	26	17	0	7
HRM2_36020	rpsK: SSU ribosomal protein S11P	0	0	0	0	0	0	0	0
HRM2_36300	rpsL: SSU ribosomal protein S12P	5	0	0	1	1	4	0	0
HRM2_36030	rpsM: RpsM	13	2	5	0	18	6	0	2
HRM2_36130	rpsN: SSU ribosomal protein S14P	0	0	0	0	0	0	0	0
HRM2_04690	rpsO: SSU ribosomal protein S15P	0	0	0	0	0	0	0	0
HRM2_31010	rpsP: SSU ribosomal protein S16P	30	6	15	28	29	23	16	10
HRM2_36170	rpsQ: RpsQ	19	1	3	4	19	8	0	4
HRM2_18630	rpsR: SSU ribosomal protein S18P	0	0	0	0	0	0	0	0
HRM2_36220	rpsS: SSU ribosomal protein S19P	11	0	4	0	10	3	0	4
HRM2_27170	rpsT: SSU ribosomal protein S20P	8	6	6	7	5	12	0	1
HRM2_08140	rsbP: RsbP	0	0	0	0	0	0	0	0
HRM2_41180	rsbU1: RsbU1	0	0	0	0	0	0	0	0
HRM2_41220	rsbV: RsbV	0	0	0	0	0	0	0	0
HRM2_41210	rsbW1: RsbW1	0	0	0	0	0	0	0	0
HRM2_16560	rsbW2: RsbW2	0	0	0	0	0	0	0	0
HRM2_39050	rscR: transcriptional regulator, LysR family	0	0	0	0	0	0	0	0
HRM2_46560	rseC: positive regulator of sigma(E), RseC/MucC	0	0	0	0	0	0	0	0
HRM2_27010	rsmB: RsmB	0	0	0	0	0	0	0	0
HRM2_05280	rtcB: RtcB	0	0	0	0	0	0	0	0
HRM2_30520	ruvA: Holliday junction DNA helicase subunit RuvA	0	0	0	0	0	0	0	0
HRM2_30510	ruvB: Holliday junction DNA helicase subunit RuvB	0	0	0	0	0	0	0	0
HRM2_30530	ruvC: Holliday junction endonuclease RuvC (EC 3.1.22.4)	0	0	0	0	0	0	0	0
HRM2_25160	sat1: adenylylsulfate kinase (EC 2.7.1.25)/sulfate adenylyltransferase (EC 2.7.7.4)	0	0	0	0	0	0	0	0
HRM2_31180	sat2: sulfate adenylyltransferase (EC 2.7.7.4)	819	454	641	566	733	691	514	575
HRM2_30450	sbcB: Exodeoxyribonuclease I subunit C (EC 3.1.11.1)	0	0	0	0	0	0	0	0
HRM2_32470	sbm: methylmalonyl-CoA mutase (EC 5.4.99.2)	106	97	79	162	49	171	180	148
HRM2_32420	sdhA: SdhA	95	49	39	103	72	91	26	74
HRM2_32410	sdhB: succinate dehydrogenase subunit B (EC 1.3.5.1)	60	34	45	70	28	66	37	46
HRM2_32430	sdhC: succinate dehydrogenase subunit C (EC 1.3.5.1)	0	0	0	0	0	0	0	0
HRM2_26650	secA: protein translocase subunit secA	0	0	1	0	0	0	0	0
HRM2_27230	secD: SecD	0	0	0	0	0	0	7	3
HRM2_36380	secE: SecE	0	0	0	0	0	0	0	0
HRM2_27240	secF: protein translocase subunit secF	0	0	0	0	0	0	0	0
HRM2_27940	secG: protein translocase subunit secG	0	0	0	0	0	0	0	0
HRM2_36060	secY: protein translocase subunit secY/sec61 alpha	0	0	0	0	0	0	0	0
HRM2_35900	selA: L-seryl-tRNA(Sec) selenium transferase (EC 2.9.1.1)	0	0	0	0	0	0	0	0
HRM2_32970	selB: selenocysteine-specific translation elongation factor SelB	0	0	0	0	0	0	0	0
HRM2_17850	selD1: selenophosphate synthase (EC 2.7.9.3)	0	0	0	0	0	0	0	0
HRM2_34830	selD2: selenophosphate synthase (EC 2.7.9.3)	0	0	0	0	0	0	0	0
HRM2_35500	serA1: D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95)	62	34	21	58	69	78	3	24
HRM2_47720	serA2: SerA2	0	0	0	0	0	0	0	0
HRM2_42260	serB: SerB	0	0	0	0	0	0	0	0
HRM2_35490	serC: phosphoserine aminotransferase apoenzyme (EC 2.6.1.52)	87	67	75	99	99	112	58	58
HRM2_11070	serS: seryl-tRNA synthetase (EC 6.1.1.11)	10	6	6	21	14	5	1	4
HRM2_40650	sfsA: SfsA	0	0	0	0	0	0	0	0
HRM2_32050	sigE: positive regulator of sigma(E), RseC/MucC	0	0	0	0	0	0	0	0
HRM2_00430	silP: SilP	0	0	0	0	0	0	0	0
HRM2_46120	sixA: phosphohistidine phosphatase, SixA	0	0	0	0	0	0	0	0
HRM2_27880	smpA: SSU ribosomal protein S30P/sigma 54 modulation protein	21	14	24	36	7	34	51	31
HRM2_19040	smpB: SsrA-binding protein	0	0	0	0	0	0	0	0
HRM2_39870	smuG: SmuG	0	0	0	0	0	0	0	0
HRM2_04900	soxA1: SoxA1	0	0	0	0	0	0	0	0
HRM2_29070	soxA2: SoxA2	0	0	0	0	0	0	0	0
HRM2_04890	soxB1: SoxB1	0	0	0	0	0	0	0	0
HRM2_29060	soxB2: SoxB2	0	0	0	0	0	0	0	0
HRM2_01420	speA: arginine decarboxylase (EC 4.1.1.19)	0	0	0	0	0	0	0	0
HRM2_01390	speB: agmatinase (EC 3.5.3.11) 169	0	0	0	0	0	0	0	0
HRM2_06260	speD: SpeD	0	0	0	0	0	0	0	0
HRM2_06250	speE1: SpeE1	0	0	0	0	0	0	0	0
HRM2_30270	speE2: SpeE2	0	0	0	0	0	0	0	0
HRM2_10160	spk: Spk	0	0	0	0	0	0	0	0
HRM2_37750	spoU: SpoU	0	0	0	0	0	0	0	0
HRM2_24780	sppA: signal peptide peptidase A. Serine peptidase. MEROPS family S49	0	0	0	0	0	0	0	0
HRM2_24290	spsA: SpsA	0	0	0	0	0	0	0	0
HRM2_37950	srf: Srf	0	0	0	0	0	0	0	0
HRM2_28030	srp: Srp	15	0	0	1	12	0	0	0
HRM2_12810	sseA: SseA	0	0	0	0	0	0	0	0
HRM2_26570	ssuA: SsuA	0	0	0	0	0	0	0	0
HRM2_26550	ssuB: SsuB	0	0	0	0	0	0	0	0
HRM2_26560	ssuC: SsuC	0	0	0	0	0	0	0	0
HRM2_32450	sucC1: succinyl-CoA synthetase (ADP-forming) beta subunit (EC 6.2.1.5)	39	19	26	51	26	54	3	29
HRM2_04440	sucC2: SucC2	0	0	0	0	0	0	1	0
HRM2_05380	sucC3: SucC3	0	0	0	0	0	0	0	0
HRM2_37830	sucC4: SucC4	0	0	0	0	0	0	0	0
HRM2_06780	sucD1: SucD1	4	0	19	1	26	15	0	1
HRM2_32440	sucD2: succinyl-CoA synthetase (ADP-forming) alpha subunit (EC 6.2.1.5)	54	50	37	85	53	84	68	60
HRM2_16770	sucD3: SucD3	36	19	21	13	57	47	3	27
HRM2_47200	sucD4: SucD4	0	0	0	0	0	0	0	0
HRM2_29340	sufC: Iron-regulated ABC transporter ATPase subunit SufC	0	0	0	0	0	0	0	0
HRM2_13280	sulP1: SulP1	0	0	0	0	0	0	0	0
HRM2_33490	sulP2: SulP2	0	0	0	0	0	0	0	0
HRM2_40360	sulP3: SulP3	0	0	0	0	0	0	0	0
HRM2_24080	tag: DNA-3-methyladenine glycosylase I (EC 3.2.2.20)	0	0	0	0	0	0	0	0
HRM2_18140	tagB1: TagB1	0	0	0	0	0	0	0	0
HRM2_18180	tagB2: TagB2	0	0	0	0	0	0	0	0
HRM2_27510	talC: TalC	28	5	10	18	46	37	23	11
HRM2_47220	tapB: TapB	0	0	0	0	0	0	0	0
HRM2_06850	tatA: TatA	0	0	0	0	0	0	0	0
HRM2_42340	tatB: TatB	0	0	0	0	0	0	0	0
HRM2_42350	tatC: TatC	0	0	0	0	0	0	0	0
HRM2_06880	tatD1: Sec-independent protein translocase TatD (EC 3.1.21.-)	0	0	0	0	0	0	0	0
HRM2_11970	tatD2: TatD2	0	0	0	0	0	0	0	0
HRM2_22600	tbpA: TbpA	0	0	0	0	0	0	0	0
HRM2_10290	terC: TerC	0	0	0	0	0	0	0	0
HRM2_06150	tesB: TesB	0	0	0	0	0	0	0	0
HRM2_31390	tgt: tRNA-guanine transglycosylase (EC 2.4.2.29)	0	0	0	0	0	0	0	0
HRM2_06760	thiC: ThiC	15	8	44	57	57	27	28	61
HRM2_15370	thiE: thiamine-phosphate diphosphorylase	0	0	0	0	0	0	0	0
HRM2_39110	thiF: ThiF	0	0	0	0	0	0	0	0
HRM2_07610	thiJ: ThiJ	0	0	0	0	0	0	0	0
HRM2_38120	thiM: hydroxyethylthiazole kinase	0	0	0	0	0	0	0	0
HRM2_18060	thiN: thiamine diphosphokinase	0	0	0	0	0	0	0	0
HRM2_22610	thiP: ThiP	0	0	0	0	0	0	0	0
HRM2_11060	thrC: L-threonine synthase (EC 4.2.3.1)	3	0	2	2	5	5	0	3
HRM2_07910	thrS1: ThrS1	0	0	0	0	0	0	0	0
HRM2_37660	thrS2: threonyl-tRNA synthetase (EC 6.1.1.3)/Ser-tRNA(Thr) hydrolase (EC 3.1.1.-)	0	4	3	0	12	5	0	0
HRM2_09750	thx: Thx	0	0	0	0	0	0	0	0
HRM2_18050	thyX: ThyX	0	2	0	2	0	4	0	1
HRM2_48140	tkt1: Tkt1	23	7	15	32	14	25	10	13
HRM2_37740	tlpB: TlpB	0	0	0	0	0	0	0	0
HRM2_25810	tmcA1: TmcA1	0	0	0	0	0	0	0	0
HRM2_44980	tmcA2: TmcA2	0	0	0	0	0	0	0	0
HRM2_25800	tmcB1: TmcB1	9	10	7	8	2	13	6	6
HRM2_44990	tmcB2: TmcB2	0	0	0	0	0	0	0	0
HRM2_25790	tmcC1: TmcC1	0	0	0	0	0	0	0	0
HRM2_45000	tmcC2: TmcC2	0	0	0	0	0	0	0	0
HRM2_26750	tmk: thymidylate kinase (EC 2.7.4.9)	0	0	0	0	4	0	0	0
HRM2_48360	tolC: TolC	0	0	0	0	0	0	0	0
HRM2_30590	tolQ1: Cell division and transport-associated protein TolQ (TC 2.C.1.2.1)	0	0	0	0	0	0	0	0
HRM2_00060	tolQ2: outer membrane transport energization protein ExbB (TC 2.C.1.1.1)	0	0	0	0	0	0	0	0
HRM2_00070	tolQ3: outer membrane transport energization protein ExbB (TC 2.C.1.1.1)	0	0	0	0	0	0	0	0
HRM2_30580	tolR: Cell division and transport-associated protein TolR (TC 2.C.1.2.1)	0	0	0	0	0	0	0	0
HRM2_00040	tonB: outer membrane transport energization protein TonB (TC 2.C.1.1.1)	0	0	0	0	0	0	0	0
HRM2_27270	topA: DNA topoisomerase I (EC 5.99.1.2)	0	0	0	0	0	0	0	0
HRM2_25900	topB: TopB	0	0	0	0	0	0	0	0
HRM2_27930	tpi: triosephosphate isomerase (EC 5.3.1.1)	71	44	40	77	56	71	76	38
HRM2_10300	tpx: thiol peroxidase (atypical 2-Cys peroxiredoxin) (EC 1.	21	17	7	27	20	23	28	29
HRM2_23740	tpxA: thiol peroxidase (atypical 2-Cys peroxiredoxin) (EC 1.11.1.5)	8	11	13	32	19	23	46	37
HRM2_p00110	traA: TraA; conjugal transfer protein TraA	0	0	0	0	0	0	0	0
HRM2_12350	traB: TraB	0	0	0	0	0	0	0	0
HRM2_11090	trkA1: TrkA1	0	0	1	0	0	0	0	0
HRM2_16330	trkA2: TrkA2	0	0	0	0	0	0	0	0
HRM2_22900	trkA3: transporter, CPA2 family (TC 2.A.37)	0	0	0	0	0	0	0	0
HRM2_36670	trkA4: TrkA4	0	0	0	0	0	0	0	0
HRM2_16340	trkB: TrkB	0	0	0	0	0	0	0	0
HRM2_36660	trkH: TrkH	0	0	0	0	0	0	0	0
HRM2_26600	trmA: 23S rRNA m(5)U-1939 methyltransferase (EC 2.1.1.190)	0	0	0	0	0	0	0	0
HRM2_30980	trmD: tRNA (Guanine37-N(1)-) methyltransferase (EC 2.1.1.31)	0	0	0	0	0	0	0	0
HRM2_06650	trmE: tRNA modification GTPase trmE	0	0	0	0	0	0	0	0
HRM2_12780	trmH1: TrmH1	0	0	0	0	0	0	0	0
HRM2_30700	trmH2: TrmH2	0	0	0	0	0	0	0	0
HRM2_33430	trpA: tryptophan synthase, alpha chain (EC 4.2.1.20)	6	3	0	5	14	0	0	0
HRM2_33440	trpB: tryptophan synthase, beta chain (EC 4.2.1.20)	1	0	0	0	6	2	0	0
HRM2_17680	trpC: indole-3-glycerol phosphate synthase (EC 4.1.1.48)	0	0	0	0	0	0	0	0
HRM2_16000	trpD1: anthranilate phosphoribosyltransferase (EC 2.4.2.	0	0	0	0	2	0	0	0
HRM2_17690	trpD2: anthranilate phosphoribosyltransferase (EC 2.4.2.18)	0	5	5	3	8	8	6	0
HRM2_17710	trpE: anthranilate synthase, component I (EC 4.1.3.27)	0	0	1	1	4	0	0	0
HRM2_17700	trpG: anthranilate synthase, component II (EC 4.1.3.27)	0	0	0	0	0	0	0	0
HRM2_22300	trpS: tryptophanyl-tRNA synthetase (EC 6.1.1.2)	0	0	0	0	0	0	0	0
HRM2_22180	truA1: TruA1	0	0	0	0	0	0	0	0
HRM2_39310	truA2: TruA2	0	0	0	0	0	0	0	0
HRM2_04680	truB: tRNA pseudouridine synthase B (EC 4.2.1.70)	0	0	0	0	0	0	0	0
HRM2_35810	truC: tRNA pseudouridine synthase C (EC 5.4.99.-)	0	0	0	0	0	0	0	0
HRM2_11650	trxA1: thioredoxin	1	1	1	6	5	6	0	0
HRM2_12330	trxA2: thioredoxin	87	40	49	84	60	42	56	50
HRM2_48270	trxA3: TrxA3	0	0	0	0	0	0	0	0
HRM2_12320	trxB: TrxB	15	0	4	16	24	18	8	0