Shotgun proteomics data of Desulfonema limicola

Selected Cell

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Sheet1

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dnl_02080	Dnl_02080: FHA domain-containing protein	0	0	0	0	0	0	0	0
dnl_02090	Dnl_02090: FHA domain-containing protein	0	0	0	0	0	0	0	0
dnl_02100	Dnl_02100: Phosphatase, PPM-type	0	0	0	0	0	0	0	0
dnl_02110	Dnl_02110: Putative protein kinase, CHASE2 and tetratricopeptide domains-containing	0	0	0	0	0	0	0	0
dnl_02130	Dnl_02130: Predicted ATP-NAD kinase	0	0	0	0	0	0	0	0
dnl_02140	Dnl_02140: Pentapeptide repeat-containing protein	0	0	0	0	0	0	0	0
dnl_02150	Dnl_02150: Uncharacterized protein	0	0	0	0	0	0	0	0
dnl_02170	Dnl_02170: Uncharacterized protein	0	0	0	0	0	0	0	0
dnl_02190	Dnl_02190: Uncharacterized protein	0	0	0	0	0	0	0	0
dnl_02200	Dnl_02200: Conserved uncharacterized protein, UROD/MetE domain-containing	0	2	2	5	0	0	0	0
dnl_02210	Dnl_02210: Conserved uncharacterized protein	0	0	0	0	0	0	0	0
dnl_02220	TatA1: Sec-independent protein translocase protein	0	0	0	0	0	0	0	0
dnl_02230	Dnl_02230: Calcium-translocating P-type ATPase	0	0	0	0	0	0	0	0
dnl_02240	Dnl_02240: Uncharacterized protein	0	0	0	0	0	0	0	0
dnl_02250	Map: Methionine aminopeptidase	0	0	0	0	0	0	0	0
dnl_02260	Dnl_02260: Conserved uncharacterized protein	0	0	0	0	0	0	0	0
dnl_02270	Dnl_02270: Two component system response regulator/histidine kinase	0	0	0	0	0	0	0	0
dnl_02280	MtnA: Methylthioribose-1-phosphate isomerase	0	0	0	0	0	0	0	0
dnl_02290	Dnl_02290: Transcriptional regulator, Crp-type	0	0	0	0	0	0	0	0
dnl_02300	MoaB: Molybdenum cofactor biosynthesis protein	0	0	0	0	0	0	0	0
dnl_02310	Dnl_02310: Phosphoribosyl transferase	0	0	0	0	0	0	0	0
dnl_02320	Dnl_02320: Phosphatidylglycerophosphatase A	0	0	0	0	0	0	0	0
dnl_02330	Dnl_02330: Transcriptional regulator, GntR family	0	0	0	0	0	0	0	0
dnl_02340	Dnl_02340: Predicted endopeptidase, NLPC/P60	0	0	0	0	0	0	0	0
dnl_02350	KamA1: L-lysine 2,3-aminomutase	0	0	0	0	0	0	0	0
dnl_02360	Mpl: UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase	0	0	0	0	0	0	0	0
dnl_02370	Dnl_02370: AAA family ATPase	0	0	0	0	0	0	0	0
dnl_02380	TraB: Conjugal transfer protein	0	0	0	0	0	0	0	0
dnl_02390	Dnl_02390: Chemotaxis protein, CheW/CheV-like	0	0	0	0	0	0	0	0
dnl_02400	Dnl_02400: Conserved uncharacterized protein	0	0	0	0	0	0	0	0
dnl_02410	Dnl_02410: Polyprenyl synthetase	0	0	0	0	0	0	0	0
dnl_02420	RimO: Ribosomal protein S12 methylthiotransferase RimO	0	0	0	0	0	0	0	0
dnl_02430	Dnl_02430: Conserved unchararterized protein, tetratricopeptide-like domain-containing	0	0	0	0	0	0	0	0
dnl_02440	Dnl_02440: Peptidoglycan-synthase activator, LpoB-like	0	0	0	0	0	0	0	0
dnl_02450	Dnl_02450: Conserved uncharacterized protein	0	0	0	0	0	0	0	0
dnl_02460	Dnl_02460: SAM-dependent methyltransferase	0	0	0	0	0	0	0	0
dnl_02470	Dnl_02470: SAM-dependent methyltransferase	0	0	0	0	0	0	0	0
dnl_02480	Dnl_02480: SAM-dependent methyltransferase	0	0	0	0	0	0	0	0
dnl_02500	Dnl_02500: Uncharacterized ABC transporter, solute-binding protein family 3	3	6	5	0	0	3	8	2
dnl_02510	Dnl_02510: Two component system response regulator/histidine kinase	0	0	0	0	0	0	0	0
dnl_02520	Dnl_02520: Conserved uncharacterized protein	0	0	0	0	0	0	0	0
dnl_02530	Dnl_02530: PAS modulated sigma54-dependent transcriptional regulator, Fis family	0	0	0	0	0	0	0	0
dnl_02540	Dnl_02540: Conserved uncharacterized protein	0	0	0	0	0	0	0	0
dnl_02550	Dnl_02550: Aminotransferase, class IV	0	0	0	0	0	0	0	0
dnl_02560	Dnl_02560: Uncharacterized protein	0	0	0	0	0	0	0	0
dnl_02570	NadE: Glutamine-dependent NAD(+) synthetase	0	0	0	0	0	0	0	0
dnl_02580	Dnl_02580: Lytic transglycosylase, DUF4124	0	0	0	0	0	0	0	0
dnl_02590	Dnl_02590: Conserved uncharacterized protein	0	0	0	0	0	0	0	0
dnl_02600	Dnl_02600: Putative exonuclease, RdgC	0	0	0	0	0	0	0	0
dnl_02610	Dnl_02610: Conserved uncharacterized protein	0	0	0	0	0	0	0	0
dnl_02620	DnaN: DNA polymerase III, beta sliding clamp subunit	0	6	3	2	0	3	6	0
dnl_02630	GyrB: DNA gyrase, subunit beta	0	0	0	0	0	0	0	0
dnl_02640	PlsY: Glycerol-3-phosphate 1-O-acyltransferase	0	0	0	0	0	0	0	0
dnl_02660	Dnl_02660: Conserved uncharacterized protein, immunoglobulin-like fold-containing	0	0	0	0	0	0	0	0
dnl_02670	Dnl_02670: Penicillin acylase family protein	6	19	33	21	5	22	33	27
dnl_02680	RdgB: ITP/XTP pyrophosphatase	0	0	0	0	0	0	0	0
dnl_02690	PckA: Phosphoenolpyruvate carboxykinase	41	65	35	16	39	37	35	37
dnl_02700	Dnm_02740: Conserved uncharacterized protein, NTP hydrolase p-loop-containing	0	0	0	0	0	0	0	0
dnl_02710	Dnl_02710: Conserved uncharacterized protein, NTP hydrolase p-loop-containing	0	0	0	0	0	0	0	0
dnl_02720	Dnl_02720: Conserved uncharacterized protein, NTP hydrolase p-loop-containing	0	0	0	0	0	0	0	0
dnl_02730	Dnl_02730: Conserved uncharacterized protein, NTP hydrolase p-loop-containing	0	0	0	0	0	0	0	0
dnl_02740	Dnl_02740: Conserved uncharacterized protein, NTP hydrolase p-loop-containing	0	0	0	0	0	0	0	0
dnl_02750	Dnl_02750: Uncharacterized protein	0	0	0	0	0	0	0	0
dnl_02760	Dnl_02760: Conserved uncharacterized protein, WD40-repeat-containing	0	0	0	0	0	0	0	0
dnl_02770	Dnl_02770: Conserved uncharacterized protein, NTP hydrolase p-loop-containing	0	0	0	0	0	0	0	0
dnl_02780	Dnl_02780: Acyl-CoA hydrolase	0	0	0	0	0	0	0	0
dnl_02790	Dnl_02790: Conserved uncharacterized protein, DUF2065	0	0	0	0	0	0	0	0
dnl_02800	QueA: S-adenosylmethionine:tRNA ribosyltransferase-isomerase	0	0	0	0	0	0	0	0
dnl_02810	Tgt: Queuine tRNA-ribosyltransferase	0	0	0	0	0	0	0	0
dnl_02820	Dnl_02820: Nitrogen-fixing domain-containing protein, NifU-like	1	3	3	1	4	0	4	3
dnl_02830	AspC1: Aspartate aminotransferase	4	3	5	2	4	1	0	1
dnl_02840	Dnl_02840: Predicted diadenylate cyclase	0	0	0	0	0	0	0	0
dnl_02850	RecG: ATP-dependent DNA helicase	0	0	0	0	0	0	0	0
dnl_02860	Dnl_02860: Putative peptidase, MA-like	0	0	0	0	0	0	0	0
dnl_02870	Dnl_02870: Uncharacterized protein	0	0	0	0	0	0	0	0
dnl_02880	Dnl_02880: Two component system protein, CheW-like and ArcB sensor kinase domains-containing	0	0	0	0	0	0	0	0
dnl_02890	CheY1: Chemotaxis protein	0	0	0	0	0	0	0	0
dnl_02900	Dnl_02900: Chemotaxis protein, CheC-like	0	0	0	0	0	0	0	0
dnl_02910	Dnl_02910: Two component system response regulator/histidine kinase, PAS domain-containing	0	0	0	0	0	0	0	0
dnl_02920	MutL: DNA mismatch repair protein	0	0	0	0	0	0	0	0
dnl_02930	Dnl_02930: Conserved uncharacterized protein	0	0	3	0	0	0	8	0
dnl_02940	Dnl_02940: Stress responsive alpha-beta barrel domain-containing protein	0	0	3	0	0	0	2	0
dnl_02950	Dnl_02950: Extracellular solute-binding protein, family 3	0	0	0	0	0	0	0	0
dnl_02970	Dnl_02970: Putative transposase, RpnA/YhgA-like	0	0	0	0	0	0	0	0
dnl_02980	Dnl_02980: Putative transposase, RpnA/YhgA-like	0	0	0	0	0	0	0	0
dnl_02990	Dnl_02990: Putative transposase, RpnA/YhgA-like and DUF4351	0	0	0	0	0	0	0	0
dnl_03000	Dnl_03000: Helicase/UvrB domain-containing protein	0	0	0	0	0	0	0	0
dnl_03010	Dnl_03010: FAD/NAD(P)-binding domain-containing protein	0	0	0	0	0	0	0	0
dnl_03020	Dnl_03020: CoA-binding domain-containing protein	0	0	0	0	0	0	0	0
dnl_03030	AspS: Aspartate--tRNA(Asp/Asn) ligase	0	0	0	0	0	0	0	0
dnl_03040	Dnl_03040: Cysteine peptidase, C10 family	0	0	0	0	0	0	0	0
dnl_03050	HisS: Histidine--tRNA ligase	0	0	0	0	0	0	0	0
dnl_03060	Dnl_03060: Putative phosphohydrolase, GAF and HD domains-containing	0	0	0	0	0	0	0	0
dnl_03070	Dnl_03070: Polyprenyl synthetase	0	0	0	0	0	0	0	0
dnl_03080	Dnl_03080: Two component system response regulator histidine kinase	0	0	0	0	0	0	0	0
dnl_03090	Dnl_03090: Two component system response regulator histidine kinase, CHASE8 domain-containing	0	0	0	0	0	0	0	0
dnl_03100	Dnl_03100: YfiR-like (DUF4154) domain-containing protein	0	0	0	0	0	0	0	0
dnl_03110	Dnl_03110: TonB-dependent receptor-like superfamily protein	0	0	0	0	0	0	0	0
dnl_03130	Dnl_03130: Acyltransferase-domain-containing protein	0	0	0	0	0	0	0	0
dnl_03140	Dnl_03140: Conserved uncharacterized protein, ATP-grasp fold domain-containing	0	0	0	0	0	0	0	0
dnl_03150	LysA1: Diaminopimelate decarboxylase	0	0	0	0	0	0	0	0
dnl_03160	Dnl_03160: von Willebrand factor A-like domain-containing protein	0	0	0	0	0	0	0	0
dnl_03170	Dnl_03170: SAM-dependent methyltransferase	0	0	0	0	0	0	0	0
dnl_03180	Dnl_03180: Radical SAM domain-containing protein	0	0	0	0	0	0	0	0
dnl_03190	Dnl_03190: Conserved uncharacterized protein	0	0	0	0	0	0	0	0
dnl_03200	Dnl_03200: Conserved uncharacterized protein	0	0	0	0	0	0	0	0
dnl_03210	Dnl_03210: Conserved uncharacterized protein	0	0	0	0	0	0	0	0
dnl_03220	Dnl_03220: Prenyltransferase family protein, UbiA-like	0	0	0	0	0	0	0	0
dnl_03230	Dnl_03230: Flavin prenyltransferase, UbiX family	0	0	0	0	0	0	0	0
dnl_03240	Dnl_03240: AAA ATPase-like domain-containing protein	0	0	0	0	0	0	0	0
dnl_03250	Dnl_03250: AAA ATPase-like domain-containing protein	0	0	0	0	0	0	0	0
dnl_03260	Dnl_03260: AAA ATPase-like domain-containing protein	0	0	0	0	0	0	0	0
dnl_03270	Dnl_03270: Uncharacterized protein	0	0	0	0	0	0	0	0
dnl_03280	Dnl_03280: Uncharacterized protein, Integrase domain-containing	0	0	0	0	0	0	0	0
dnl_03290	Dnl_03290: HTH-type transcription regulator domain-containing, MerK-type	0	0	0	0	0	0	0	0
dnl_03300	Dnl_03300: SAM-dependent DNA methylase	0	0	0	0	0	0	0	0
dnl_03310	Dnl_03310: Conserved uncharacterized protein, DUF1016	0	0	0	0	0	0	0	0
dnl_03320	HsdS1: Type-I restriction modification system methylase	0	0	0	0	0	0	0	0
dnl_03330	Dnl_03330: Helicase domain-containing protein	0	0	0	0	0	0	0	0
dnl_03340	Dnl_03340: Uncharacterized protein	0	0	0	0	0	0	0	0
dnl_03350	Dnl_03350: Decarboxylase family protein, UbiD-like	0	0	0	0	0	0	0	0
dnl_03370	PbpA1: Penicillin-binding protein 1A	0	0	0	0	0	0	0	0
dnl_03390	TrpG1: Anthranilate synthase component II	0	0	0	0	0	0	0	0
dnl_03400	TrpE1: Anthranilate synthase component I	0	0	0	0	0	0	0	0
dnl_03410	Dnl_03410: Ankyrin repeat-containing protein	0	0	0	0	0	0	0	0
dnl_03420	Dnl_03420: Conserved uncharacterized protein, WD40-repeat-containing	0	0	0	0	0	0	0	0
dnl_03430	Dnl_03430: Conserved uncharacterized protein	0	0	0	0	0	0	0	0
dnl_03440	Dnl_03440: Putative zinc- or iron-chelating domain-containing protein	1	0	0	0	0	0	0	0
dnl_03450	MnmE: tRNA modification GTPase	0	0	0	0	0	0	0	0
dnl_03460	Dnl_03460: Uncharacterized protein, R3H domain-containing	0	0	0	0	0	0	0	0
dnl_03470	YidC: Membrane protein insertase	0	0	0	0	0	0	0	0
dnl_03490	Dnl_03490: Putative membrane protein insertion efficiency factor	0	0	0	0	0	0	0	0
dnl_03500	RmpH: 50S ribosomal protein L34	0	0	0	0	0	0	0	0
dnl_03510	Dnl_03510: Ribonuclease E/G family protein	0	0	0	0	0	0	0	0
dnl_03520	Dnl_03520: Radical SAM domain-containing protein, DUF2344	0	0	0	0	0	0	0	0
dnl_03530	Dnl_03530: Peptidase, S1C family	0	0	0	0	0	0	0	0
dnl_03540	Dnl_03540: Signal transduction response regulator, receiver domain histidine kinase	0	0	0	0	0	0	0	0
dnl_03550	Dnl_03550: Signal transduction response regulator, receiver domain histidine kinase	0	0	0	0	0	0	0	0
dnl_03560	Dnl_03560: Uncharacterized ABC transporter, substrate-binding protein	0	0	0	0	0	0	0	0
dnl_03570	Dnl_03570: Uncharacterized ABC transporter, substrate-binding protein	0	0	0	0	0	0	0	0
dnl_03580	Dnl_03580: Conserved uncharacterized protein	0	0	0	0	0	0	0	0
dnl_03590	Dnl_03590: Calcium-translocating P-type ATPase, PMCA	0	0	0	0	0	0	0	0
dnl_03600	GlpK: Glycerol kinase (ATP: glycerol 3-phosphotransferase)	0	0	0	0	0	0	0	0
dnl_03610	Adh1: Iron-containing alcohol dehydrogenase	0	0	0	0	0	0	0	0
dnl_03620	Dnl_03620: Phosphatase, PPM-type	0	0	0	0	0	0	0	0
dnl_03630	Dnl_03630: Anti-sigma factor antagonist	0	0	0	0	0	0	0	0
dnl_03640	Dnl_03640: Methyl-accepting chemotaxis protein, double CACHE domain-containing	0	0	0	0	0	0	0	0
dnl_03650	Dnl_03650: Na(+)/Ca(+) antiporter	0	0	0	0	0	0	0	0
dnl_03660	Dnl_03660: Methyl-accepting chemotaxis protein signailing-domain-containing protein, HAMP domain-containing	0	0	0	0	0	0	0	0
dnl_03670	Dnl_03670: Methyl-accepting chemotaxis protein domain-containing protein	0	0	0	0	0	0	0	0
dnl_03680	Dnl_03680: Signal transduction response regulator, receiver domain	0	0	0	0	0	0	0	0
dnl_03690	Dnl_03690: Uncharacterized ABC transporter, ATP-binding protein	0	0	0	0	0	0	0	0
dnl_03700	AapM1: General L-amino acid transport system permease protein	0	0	0	0	0	0	0	0
dnl_03710	AapM2: General L-amino acid transport system permease protein	0	0	0	0	0	0	0	0
dnl_03720	Dnl_03720: Uncharacterized protein	0	0	8	4	13	0	0	4
dnl_03730	Dnl_03730: Amino acid ABC transporter, substrate-binding protein	2	1	25	9	29	0	0	9
dnl_03740	AroF1: Phospho-2-dehydro-3-deoxyheptonate aldolase, Tyr-sensitive	0	5	0	0	6	6	0	0
dnl_03750	Dnl_03750: Pseudouridine synthase, RluC/RluD-like	0	0	0	0	0	0	0	0
dnl_03760	Dnl_03760: Uncharacterized protein, DUF1847	0	0	0	0	0	0	0	0
dnl_03770	Dnl_03770: Potassium channel protein	0	0	0	0	0	0	0	0
dnl_03780	HigB1: Toxin-antitoxin system, toxin component, mRNA interferase	0	0	0	0	0	0	0	0
dnl_03790	HigA1: Toxin-antitoxin system, antitoxin component	0	0	0	0	0	0	0	0
dnl_03800	Dnl_03800: Transglutamase-like domain-containing protein, DUF3488 and DUF4129	0	0	0	0	0	0	0	0
dnl_03810	Dnl_03810: Conserved uncharacterized protein, DUF58	0	0	0	0	0	0	0	0
dnl_03820	Dnl_03820: AAA family ATPase	0	0	0	0	0	0	0	0
dnl_03830	AtpF1: ATP synthase, subunit beta (ATP synthase F0 sector subunit b)	0	0	0	0	0	0	0	0
dnl_03840	AtpF2: ATP synthase, subunit beta (ATP synthase F0 sector subunit b)	0	0	0	0	0	0	0	0
dnl_03850	AtpE2: ATP synthase, subunit gamma (ATP synthase F0 sector subunit c)	0	0	0	4	0	0	0	0
dnl_03860	AtpE3: ATP synthase, subunit gamma (ATP synthase F0 sector subunit c)	0	0	0	0	0	0	0	0
dnl_03870	AtpB2: ATP synthase, subunit alpha (ATP synthase F0 sector subunit a)	0	0	0	0	0	0	0	0
dnl_03880	AtpI: Putative ATP synthase, protein I	0	0	0	0	0	0	0	0
dnl_03890	AtpZ: Putative F0F1-ATPase, Ca2+/Mg2+ transporter subunit	0	0	0	0	0	0	0	0
dnl_03900	Dnl_03900: Phosphoesterasee, DHH-like	0	0	0	0	0	0	0	0
dnl_03910	Dnl_03910: Beta-lactamase domain-containing protein	0	0	0	0	0	0	0	0
dnl_03920	Dnl_03920: Siroheme synthase domain-containing protein	0	0	0	0	0	0	0	0
dnl_03930	CcsB: Cytochrome c biogenesis protein	0	0	0	0	0	0	0	0
dnl_03940	HemA: Glutamyl-tRNA reductase	0	0	0	0	0	0	0	0
dnl_03950	FabD: Malonyl CoA-acyl carrier protein transacylase	0	0	0	0	0	0	0	0
dnl_03960	Dnl_03960: Conserved uncharacterized protein, DUF1178	0	0	0	0	0	0	0	0
dnl_03980	Dnl_03980: SH3 domain-containing protein	0	0	0	0	0	0	0	0
dnl_03990	NadB: L-aspartate oxidase	0	0	0	0	0	0	0	0
dnl_04000	Dnl_04000: Uncharacterized protein	0	0	0	0	0	0	0	0
dnl_04010	DnaJ1: Heat shock protein	0	0	0	0	0	0	0	0
dnl_04020	QueD: 6-carboxy-5,6,7,8-tetrahydropterin synthase	0	0	0	0	0	0	0	0
dnl_04030	PyrE: Orotate phosphoribosyltransferase	0	0	0	0	0	0	0	0
dnl_04040	Dnl_04040: Uncharacterized ABC transporter, ATP-binding protein	0	0	0	0	0	0	0	0
dnl_04050	Dnl_04050: Uncharacterized ABC transporter, permease protein	0	0	0	0	0	0	0	0
dnl_04060	Dnl_04060: Uncharacterized protein	0	0	0	0	0	0	0	0
dnl_04070	Dnl_04070: Conserved uncharacterized protein, NTP hydrolase p-loop-containing	0	0	0	0	0	0	0	0
dnl_04080	Dnl_04080: SAM-dependent methyltransferase	0	0	0	0	0	0	0	0
dnl_04090	Dnl_04090: Fur family transcriptional regulator	0	0	0	0	0	0	0	0
dnl_04100	Dnl_04100: Rubredoxin domain-containing protein	0	0	0	0	0	0	0	0
dnl_04110	Dnl_04110: Conserved uncharacterized protein	8	7	0	0	0	0	15	0
dnl_04120	Rbr: Rubrerythrin	67	59	55	63	67	49	56	65
dnl_04130	Dnl_04130: Conserved uncharacterized protein	0	0	0	0	0	0	0	0
dnl_04150	LeuB1: 3-isopropylmalate dehydrogenase	0	0	0	0	0	0	0	0
dnl_04160	LeuB2: 3-isopropylmalate dehydrogenase	0	0	0	0	0	0	0	0
dnl_04170	Dnl_04170: Putative acyltransferase	2	0	2	0	0	0	2	5
dnl_04180	Dnl_04180: HNH endonuclease	0	0	0	0	0	0	0	0
dnl_04190	Dnl_04190: Hydrolase, TatD-like	0	0	0	0	0	0	0	0