Additional Data related to the catabolsim of P. vulgatus

Selected Cell

Cell:

Value:

Outline 1P_vulgatus_ATCC_8482 2Proteomic_data 3Amino_acids 4Nucleotide 5Fatty_acdis_cell_wall 6Metabolites 7Metabolome_CoA 8Exo_Metabolome



Tab	Name	Contents
1	1P_vulgatus_ATCC_8482	Genome of P. vulgatus ATCC 8482
2	2Proteomics_data	Identified proteins with peptide counts
3	3Amino_acids	BioCyc-predicted biosynthesis of amino acids including identified proteins
4	4Nucleotide	BioCyc-predicted biosynthesis of nucleotides including identified proteins
5	5Fatty_acdis_cell_wall	BioCyc-predicted biosynthesis of fatty acids and cell wall including identified proteins
6	6Metabolites	Metabolites of the intracellular metabolome
7	7Metabolome_CoA	CoAs of the metabolome
8	8Exo_Metabolome	Metabolites of the extracellular metabolome

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BVU_RS18090	BVU_3607	4473758	4474171	137	c	BVU_RS18090		secondary thiamine-phosphate synthase enzyme YjbQ
BVU_RS18095	BVU_3608	4474180	4475382	400	c	BVU_RS18095		hypothetical protein
BVU_RS18100	BVU_3609	4475379	4476023	214	c	BVU_RS18100		ATP-binding cassette domain-containing protein
BVU_RS18105	BVU_3610	4476020	4477552	510	c	BVU_RS18105		DUF4836 family protein
BVU_RS18110	BVU_3611	4477557	4478258	233	c	BVU_RS18110	2.1.1.193	16S rRNA (uracil(1498)-N(3))-methyltransferase
BVU_RS18115	BVU_3612	4478287	4478853	188	c	BVU_RS18115		DUF151 domain-containing protein
BVU_RS18120	BVU_3613	4478912	4480189	425	c	BVU_RS18120		MFS transporter
BVU_RS18125	BVU_3614	4480391	4481005	204	c	BVU_RS18125		DUF5024 domain-containing protein
BVU_RS18130	BVU_3615	4481027	4481593	188	c	BVU_RS18130		hypothetical protein
BVU_RS18135	BVU_3616	4481584	4482054	156	c	BVU_RS18135		sigma-70 family RNA polymerase sigma factor
BVU_RS18140	BVU_3617	4482241	4483372	376.3333333333333	c	BVU_RS18140		galactose mutarotase
BVU_RS18145	BVU_3619	<4483513	>4483742		c	BVU_RS18145		hypothetical protein
BVU_RS18150	BVU_3620	4484007	4484552	181		BVU_RS18150		sigma-70 family RNA polymerase sigma factor
BVU_RS18155	BVU_3621	4484549	4485787	412		BVU_RS18155		autotransporter outer membrane beta-barrel domain-containing protein
BVU_RS18160	BVU_3622	4485845	4486633	262		BVU_RS18160		class I SAM-dependent methyltransferase
BVU_RS18165	BVU_3623	4487286	4488470	394	c	BVU_RS18165		class I SAM-dependent rRNA methyltransferase
BVU_RS18170	BVU_3624	4488460	4489110	216	c	BVU_RS18170		3'-5' exonuclease domain-containing protein 2
BVU_RS18175	BVU_3625	4489107	4489670	187	c	BVU_RS18175		DUF5063 domain-containing protein
BVU_RS18180	BVU_3626	4489775	4492240	821		BVU_RS18180		DNA translocase FtsK
BVU_RS18185	BVU_3627	4492257	4492871	204		BVU_RS18185		outer-membrane lipoprotein carrier protein LolA
BVU_RS18190	BVU_3628	4492941	4493888	315		trxB	1.8.1.9	thioredoxin-disulfide reductase
BVU_RS18195	BVU_3629	4493919	4496738	939		BVU_RS18195		insulinase family protein
BVU_RS18200	BVU_3630	4496748	4498235	495		BVU_RS18200		DUF5687 family protein
BVU_RS18205	BVU_3631	4498248	4498955	235		BVU_RS18205		ABC transporter ATP-binding protein
BVU_RS18210	BVU_3632	4498952	4499464	170		BVU_RS18210		NlpC/P60 family protein
BVU_RS21905	BVU_3633	4499520	4501589	689		BVU_RS21905		HAD-IA family hydrolase
BVU_RS18220	BVU_3634	4501803	4502120	105		rplU		50S ribosomal protein L21
BVU_RS18225	BVU_3635	4502142	4502405	87		rpmA		50S ribosomal protein L27
BVU_RS18230	BVU_3636	4502462	4503099	211.66666666666666	c	BVU_RS18230		thiamine diphosphokinase
BVU_RS18235	BVU_3637	4503086	4503658	190	c	pnuC		nicotinamide riboside transporter PnuC
BVU_RS18240	BVU_3638	4503778	4505052	424		serS	6.1.1.11	serine--tRNA ligase
BVU_RS18245	BVU_3639	4505193	4506410	405		BVU_RS18245		MFS transporter
BVU_RS18250	BVU_3640	4506593	4508890	765		BVU_RS18250		bifunctional dihydroorotate dehydrogenase B NAD binding subunit/NADPH-dependent glutamate synthase
BVU_RS18255	BVU_3641	4509301	4510071	256		BVU_RS18255		DUF4858 domain-containing protein
BVU_RS18260		4510018	4510392	124	c	BVU_RS18260		DMT family protein
BVU_RS18270	BVU_3644	4511652	4511873	73		BVU_RS18270		hypothetical protein
BVU_RS22585		4512046	4512222	58	c	BVU_RS22585		hypothetical protein
BVU_RS18275	BVU_3645	4512567	4513322	251	c	BVU_RS18275		tRNA 2-thiocytidine biosynthesis TtcA family protein
BVU_RS18280	BVU_3646	4513466	4514875	469		BVU_RS18280		PD40 domain-containing protein
BVU_RS18285	BVU_3647	4514889	4515359	156		BVU_RS18285		NfeD family protein
BVU_RS18290	BVU_3648	4515505	4516503	332		floA		flotillin-like protein FloA
BVU_RS18295	BVU_3649	4516697	4517575	292		BVU_RS18295		nucleoside phosphorylase
BVU_RS18300	BVU_3650	4517785	4518270	161		BVU_RS18300		GAF domain-containing protein
BVU_RS18305	BVU_3651	4518284	4519777	497		mnmE		tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE
BVU_RS18310	BVU_3653	4520891	4521728	278.3333333333333	c	BVU_RS18310		hypothetical protein
BVU_RS18315	BVU_3654	4522103	4522660	185		BVU_RS18315		Panacea domain-containing protein
BVU_RS18320	BVU_3655	4522908	4523498	196	c	BVU_RS18320		Panacea domain-containing protein
BVU_RS18325	BVU_3656	4523687	4524856	389		BVU_RS18325		ATP-binding protein
BVU_RS18330	BVU_3657	4525330	4525815	161	c	BVU_RS18330		hypothetical protein
BVU_RS18340	BVU_3658	4526266	4526982	238		BVU_RS18340		Abi family protein
BVU_RS21915		4527118	4528335	405		BVU_RS21915		IS256 family transposase
BVU_RS18360	BVU_3662	4528418	4533055	1545	c	BVU_RS18360		TIR domain-containing protein
BVU_RS18370	BVU_3663	4533358	4535088	576	c	BVU_RS18370		DUF4209 domain-containing protein
BVU_RS18375	BVU_3664	4535109	4536275	388	c	BVU_RS18375		DUF2220 family protein
BVU_RS18380	BVU_3665	4536272	4539673	1133	c	BVU_RS18380		AAA family ATPase
BVU_RS18385	BVU_3666	4539642	4540226	194	c	BVU_RS18385		DUF4194 domain-containing protein
BVU_RS18390	BVU_3667	4540223	4541671	482	c	BVU_RS18390		DUF3375 domain-containing protein
BVU_RS18395	BVU_3668	4541791	4542504	237	c	BVU_RS18395		RloB family protein
BVU_RS18400	BVU_3669	4542517	4543788	423	c	BVU_RS18400		ATP-binding protein
BVU_RS18405	BVU_3670	4544046	4544420	124	c	BVU_RS18405		RloB family protein
BVU_RS18415	BVU_3671	4544796	4546106	436	c	BVU_RS18415		ATP-binding protein
BVU_RS18420		4546635	4547708	357		BVU_RS18420		DUF6371 domain-containing protein
BVU_RS18425	BVU_3674	4547847	4548155	102		BVU_RS18425		MobC family plasmid mobilization relaxosome protein
BVU_RS18430	BVU_3675	4548145	4549086	313		BVU_RS18430		relaxase/mobilization nuclease domain-containing protein
BVU_RS18435	BVU_3676	4549121	4549519	132		BVU_RS18435		hypothetical protein
BVU_RS18440	BVU_3677	4549701	4550627	308	c	BVU_RS18440		site-specific integrase
BVU_RS18445	BVU_3678	4550722	>4551507			BVU_RS18445		restriction endonuclease subunit S
BVU_RS18455	BVU_3679	4551579	4551935	118		BVU_RS18455		hypothetical protein
BVU_RS18460		4551919	4552287	122		tnpB		IS66 family insertion sequence element accessory protein TnpB
BVU_RS18465	BVU_3681	4552363	4553976	537		BVU_RS18465		IS66-like element ISBvu3 family transposase
BVU_RS18470	BVU_3682	<4554083	4554370			BVU_RS18470		restriction endonuclease subunit S
BVU_RS18475		4554363	4554884	173	c	BVU_RS18475	3.1.21.-	restriction endonuclease subunit S
BVU_RS18480	BVU_3684	4554949	4555542	197		BVU_RS18480	3.1.21.-	restriction endonuclease subunit S
BVU_RS22320	BVU_3685	4555535	4556611	358	c	BVU_RS22320	3.1.21.-	restriction endonuclease subunit S
BVU_RS18490	BVU_3686	4556620	4558032	470	c	BVU_RS18490		virulence RhuM family protein
BVU_RS18495	BVU_3687	4558051	4559604	517	c	BVU_RS18495	2.1.1.72	type I restriction-modification system subunit M
BVU_RS18500	BVU_3688	4559611	4562439	942	c	BVU_RS18500		type I restriction endonuclease subunit R
BVU_RS18505	BVU_3689	4562556	4562765	69	c	BVU_RS18505		helix-turn-helix transcriptional regulator
BVU_RS18510	BVU_3690	4562870	4564234	454		BVU_RS18510		hypothetical protein
BVU_RS18515	BVU_3691	4564237	4564587	116		BVU_RS18515		STAS-like domain-containing protein
BVU_RS18520	BVU_3692	4564590	4565183	197		BVU_RS18520		hypothetical protein
BVU_RS18525		4565286	4565489	67		BVU_RS18525		antitoxin VbhA family protein
BVU_RS18530	BVU_3693	4565620	4566549	309	c	BVU_RS18530		HipA domain-containing protein
BVU_RS18535	BVU_3694	4566542	4566880	112	c	BVU_RS18535		HipA N-terminal domain-containing protein
BVU_RS18540	BVU_3695	4566877	4567083	68	c	BVU_RS18540		helix-turn-helix transcriptional regulator
BVU_RS18550	BVU_3698	4567993	>4569330			BVU_RS18550		helix-turn-helix domain-containing protein
BVU_RS18555	BVU_3699	4569478	4570494	338	c	BVU_RS18555		hypothetical protein
BVU_RS18560	BVU_3700	4570536	4572872	778	c	BVU_RS18560		TonB-dependent receptor
BVU_RS18565	BVU_3702	4573409	4573930	173	c	BVU_RS18565		ParB/RepB/Spo0J family partition protein
BVU_RS18570	BVU_3703	4573936	4575216	426	c	BVU_RS18570		DUF3440 domain-containing protein
BVU_RS18575	BVU_3704	4575213	4575617	134	c	BVU_RS18575		hypothetical protein
BVU_RS18585	BVU_3705	4576030	4577634	534	c	BVU_RS18585		RagB/SusD family nutrient uptake outer membrane protein
BVU_RS18590	BVU_3706	4577654	4580651	998.3333333333334	c	BVU_RS18590		TonB-dependent receptor
BVU_RS18595	BVU_3708	4580739	4581203	154	c	BVU_RS18595		beta-barrel fold lipoprotein
BVU_RS18600	BVU_3709	4582038	4582229	63		BVU_RS18600		hypothetical protein
BVU_RS18605	BVU_3710	4582462	4585557	1031		BVU_RS18605		TonB-dependent receptor
BVU_RS18610	BVU_3711	4585586	4587223	545		BVU_RS18610		RagB/SusD family nutrient uptake outer membrane protein
BVU_RS18615	BVU_3712	4587390	4587794	134		BVU_RS18615		hypothetical protein
BVU_RS18620	BVU_3713	4587800	4589155	451		BVU_RS18620		hypothetical protein
BVU_RS18625	BVU_3714	4589294	4592536	1080		BVU_RS18625		hypothetical protein

100

				Average [peptide count]
Accession No.	Locustag old	Locustag	Genome predicted funtion	1/2ODmax	ODmax	ODstat
ABR37733.1	BVU_0003	BVU_RS00015	putative ribonucleoside reductase [Phocaeicola vulgatus ATCC 8482]	8	5.75	2
ABR37734.1	BVU_0004	BVU_RS00020	putative exported protein [Phocaeicola vulgatus ATCC 8482]	2	0	0
ABR37741.1	BVU_0011	BVU_RS00060	putative 50S ribosomal protein L9 [Phocaeicola vulgatus ATCC 8482]	14	13.75	13
ABR37742.1	BVU_0012	BVU_RS00065	30S ribosomal protein S18 [Phocaeicola vulgatus ATCC 8482]	71	56.25	69
ABR37743.1	BVU_0013	BVU_RS00070	30S ribosomal protein S6 [Phocaeicola vulgatus ATCC 8482]	10.5	16.25	16.75
ABR37745.1	BVU_0015	BVU_RS00085	two-component system response regulator [Phocaeicola vulgatus ATCC 8482]	24.75	59.75	69.75
ABR37746.1	BVU_0016	BVU_RS00090	two-component system sensor histidine kinase [Phocaeicola vulgatus ATCC 8482]	5.25	1.25	2.25
ABR37747.1	BVU_0017	BVU_RS00095	putative elongation factor G [Phocaeicola vulgatus ATCC 8482]	0	36	17.75
ABR37776.1	BVU_0046	BVU_RS00240	phosphoglucomutase/phosphomannomutase [Phocaeicola vulgatus ATCC 8482]	1.75	5.5	5.25
ABR37803.1	BVU_0073	BVU_RS00375	DnaJ domain protein [Phocaeicola vulgatus ATCC 8482]	0	1	1
ABR37808.1	BVU_0078	BVU_RS00400	putative phosphoribosylformylglycinamidine synthase [Phocaeicola vulgatus ATCC 8482]	16.5	9.75	1
ABR37812.1	BVU_0082	BVU_RS00420	putative secreted protein [Phocaeicola vulgatus ATCC 8482]	2.75	1.25	0
ABR37814.1	BVU_0084	BVU_RS00430	putative endonuclease/exonuclease/phosphatase family protein [Phocaeicola vulgatus ATCC 8482]	0.75	0	3
ABR37815.1	BVU_0085	BVU_RS00435	glycoside hydrolase family 20, candidate beta-N-acetylhexosaminidase [Phocaeicola vulgatus ATCC 8482]	4.75	6.5	8.5
ABR37816.1	BVU_0086	BVU_RS00440	conserved hypothetical protein [Phocaeicola vulgatus ATCC 8482]	14.75	18	9.75
ABR37822.1	BVU_0092	BVU_RS00475	putative phosphoribosylformylglycinamidine cyclo-ligase [Phocaeicola vulgatus ATCC 8482]	0.75	1.75	0.5
ABR37825.1	BVU_0095	BVU_RS00485	orotidine 5'-phosphate decarboxylase [Phocaeicola vulgatus ATCC 8482]	0	0	1.5
ABR37827.1	BVU_0097	BVU_RS00495	UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [Phocaeicola vulgatus ATCC 8482]	1	2.25	0.75
ABR37828.1	BVU_0098	BVU_RS00500	UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [Phocaeicola vulgatus ATCC 8482]	32.75	15.25	8.25
ABR37829.1	BVU_0099	BVU_RS00505	acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase [Phocaeicola vulgatus ATCC 8482]	0	1.75	3.5
ABR37853.1	BVU_0123	BVU_RS00625	conserved hypothetical protein [Phocaeicola vulgatus ATCC 8482]	0	3.25	4.75
ABR37871.1	BVU_0143	BVU_RS00725	GTP cyclohydrolase II [Phocaeicola vulgatus ATCC 8482]	3.25	3	3.5
ABR37872.1	BVU_0144	BVU_RS00730	aspartate aminotransferase [Phocaeicola vulgatus ATCC 8482]	20.5	20.5	20.25
ABR37874.1	BVU_0146	BVU_RS00745	5'-nucleotidase precursor [Phocaeicola vulgatus ATCC 8482]	1	0.5	0
ABR37875.1	BVU_0147	BVU_RS00750	putative 5'-nucleotidase/2',3'-cyclic phosphodiesterase [Phocaeicola vulgatus ATCC 8482]	3	2	1.5
ABR37876.1	BVU_0148	BVU_RS00755	50S ribosomal protein L19 [Phocaeicola vulgatus ATCC 8482]	16.5	24	29
ABR37885.1	BVU_0157	BVU_RS00815	conserved protein, with a weak D-galactarate dehydratase/altronate hydrolase domain [Phocaeicola vulgatus ATCC 8482]	0	1	0
ABR37897.1	BVU_0169	BVU_RS00870	putative outer membrane protein, probably involved in nutrient binding [Phocaeicola vulgatus ATCC 8482]	7	0	6.25
ABR37919.1	BVU_0191	BVU_RS00975	ROK family transcriptional repressor, with glucokinase domain [Phocaeicola vulgatus ATCC 8482]	8.25	12.5	15.75
ABR37923.1	BVU_0195	BVU_RS00995	membrane fusion efflux protein [Phocaeicola vulgatus ATCC 8482]	14.5	10	12.25
ABR37924.1	BVU_0196	BVU_RS01000	putative outer membrane efflux protein [Phocaeicola vulgatus ATCC 8482]	1.75	2.5	2
ABR37926.1	BVU_0198	BVU_RS01010	conserved hypothetical protein [Phocaeicola vulgatus ATCC 8482]	0	1.75	4.25
ABR37928.1	BVU_0200	BVU_RS01020	putative alcohol dehydrogenase [Phocaeicola vulgatus ATCC 8482]	0	0	1
ABR37929.1	BVU_0201	BVU_RS01025	conserved hypothetical protein [Phocaeicola vulgatus ATCC 8482]	0	4.5	4.5
ABR37933.1	BVU_0205	BVU_RS01045	aspartate-semialdehyde dehydrogenase [Phocaeicola vulgatus ATCC 8482]	22.25	32.75	31.25
ABR37934.1	BVU_0206	BVU_RS01050	putative FKBP-type peptidyl-prolyl cis-trans isomerase FkpA [Phocaeicola vulgatus ATCC 8482]	8.25	5	5.5
ABR37935.1	BVU_0207	BVU_RS01055	glycyl-tRNA synthetase [Phocaeicola vulgatus ATCC 8482]	4	5.75	2
ABR37960.1	BVU_0238	BVU_RS01205	putative membrane fusion protein transporter [Phocaeicola vulgatus ATCC 8482]	10.75	7.25	6.75
ABR37963.1	BVU_0241	BVU_RS01220	acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase [Phocaeicola vulgatus ATCC 8482]	2	2.75	1.5
ABR37964.1	BVU_0242	BVU_RS01225	outer membrane protein oprM precursor [Phocaeicola vulgatus ATCC 8482]	35.25	11.5	8
ABR37965.1	BVU_0243	BVU_RS01230	AcrB/AcrD family multidrug resistance protein [Phocaeicola vulgatus ATCC 8482]	7	1	1.75
ABR37966.1	BVU_0244	BVU_RS01235	AcrA/AcrE family multidrug resistance protein [Phocaeicola vulgatus ATCC 8482]	50	24	20
ABR37967.1	BVU_0245	BVU_RS01240	NADP-dependent malate dehydrogenase [Phocaeicola vulgatus ATCC 8482]	17.5	23.25	11.75
ABR37968.1	BVU_0246	BVU_RS01250	NADP-specific glutamate dehydrogenase [Phocaeicola vulgatus ATCC 8482]	76.5	66.25	43
ABR37969.1	BVU_0247	BVU_RS01255	conserved hypothetical protein [Phocaeicola vulgatus ATCC 8482]	23.25	16.5	9.75
ABR37970.1	BVU_0248	BVU_RS01260	conserved hypothetical protein [Phocaeicola vulgatus ATCC 8482]	23.25	13	15.25
ABR37971.1	BVU_0249	BVU_RS01265	hypothetical protein BVU_0249 [Phocaeicola vulgatus ATCC 8482]	58.5	38.25	62.75
ABR37973.1	BVU_0251	BVU_RS01275	NAD-specific glutamate dehydrogenase 1 [Phocaeicola vulgatus ATCC 8482]	0	10.25	11.75
ABR37974.1	BVU_0252	BVU_RS01280	conserved hypothetical protein [Phocaeicola vulgatus ATCC 8482]	1	1	0
ABR37978.1	BVU_0256	BVU_RS01300	malate dehydrogenase [Phocaeicola vulgatus ATCC 8482]	56.5	72	86
ABR37979.1	BVU_0257	BVU_RS01305	conserved hypothetical protein [Phocaeicola vulgatus ATCC 8482]	22	10.75	15.25
ABR37983.1	BVU_0263	BVU_RS01330	lipoprotein [Phocaeicola vulgatus ATCC 8482]	64	61.5	65.25
ABR37986.1	BVU_0266	BVU_RS01345	Mrp/Nbp35 family ATP-binding protein [Phocaeicola vulgatus ATCC 8482]	3.75	4.75	7.75
ABR37988.1	BVU_0268	BVU_RS01355	conserved hypothetical protein [Phocaeicola vulgatus ATCC 8482]	8.75	2.25	6
ABR37989.1	BVU_0269	BVU_RS01360	branched-chain amino acid aminotransferase [Phocaeicola vulgatus ATCC 8482]	6.75	23.75	17.5
ABR38002.1	BVU_0282	BVU_RS01425	conserved hypothetical protein [Phocaeicola vulgatus ATCC 8482]	1	1.25	1.75
ABR38018.1	BVU_0298	BVU_RS01520	dTDP-glucose 4,6-dehydratase [Phocaeicola vulgatus ATCC 8482]	2	6.5	6.5
ABR38029.1	BVU_0309	BVU_RS01575	putative methylmalonyl-CoA mutase small subunit [Phocaeicola vulgatus ATCC 8482]	11.5	7.75	5
ABR38030.1	BVU_0310	BVU_RS01580	methylmalonyl-CoA mutase large subunit [Phocaeicola vulgatus ATCC 8482]	16.25	19	6.5
ABR38035.1	BVU_0315	BVU_RS01605	putative two-component system sensor histidine kinase [Phocaeicola vulgatus ATCC 8482]	1.5	1.75	1
ABR38036.1	BVU_0316	BVU_RS01610	putative membrane transport protein [Phocaeicola vulgatus ATCC 8482]	2.5	0	0.75
ABR38037.1	BVU_0317	BVU_RS01615	putative cation efflux pump [Phocaeicola vulgatus ATCC 8482]	0	0.75	0
ABR38038.1	BVU_0318	BVU_RS01620	putative cation efflux pump [Phocaeicola vulgatus ATCC 8482]	1.5	5.25	3.5
ABR38039.1	BVU_0319	BVU_RS01625	outer membrane efflux protein oprM precursor [Phocaeicola vulgatus ATCC 8482]	2	3.25	8.5
ABR38040.1	BVU_0320	BVU_RS01630	hypothetical protein BVU_0320 [Phocaeicola vulgatus ATCC 8482]	0	2.75	3.25
ABR38045.1	BVU_0325	BVU_RS01655	electron transfer flavoprotein beta-subunit [Phocaeicola vulgatus ATCC 8482]	7	15.75	14.5
ABR38046.1	BVU_0326	BVU_RS01660	electron transfer flavoprotein alpha-subunit [Phocaeicola vulgatus ATCC 8482]	1.25	1.75	0
ABR38048.1	BVU_0328	BVU_RS01670	acyl-CoA dehydrogenase [Phocaeicola vulgatus ATCC 8482]	8.25	7	3.5
ABR38049.1	BVU_0329	BVU_RS01675	putative histidine decarboxylase [Phocaeicola vulgatus ATCC 8482]	0	4.75	6
ABR38050.1	BVU_0330	BVU_RS01680	putative phenylacetic acid degradation protein [Phocaeicola vulgatus ATCC 8482]	0	0	0.75
ABR38051.1	BVU_0331	BVU_RS01685	putative DNA mismatch repair protein [Phocaeicola vulgatus ATCC 8482]	0	1	1.25
ABR38060.1	BVU_0340	BVU_RS01735	putative oxidoreductase [Phocaeicola vulgatus ATCC 8482]	8.5	8.25	6
ABR38064.1	BVU_0345	BVU_RS01760	60 kDa chaperonin [Phocaeicola vulgatus ATCC 8482]	46.25	82.75	73
ABR38065.1	BVU_0346	BVU_RS01765	10 kDa chaperonin [Phocaeicola vulgatus ATCC 8482]	21.75	31.5	36.75
ABR38070.1	BVU_0351	BVU_RS01790	histidyl-tRNA synthetase [Phocaeicola vulgatus ATCC 8482]	5.75	7	7
ABR38080.1	BVU_0361	BVU_RS01845	3,4-dihydroxy-2-butanone 4-phosphate synthase [Phocaeicola vulgatus ATCC 8482]	3.5	2.5	2.25
ABR38092.1	BVU_0373	BVU_RS01905	conserved hypothetical protein [Phocaeicola vulgatus ATCC 8482]	9	14	15.75
ABR38093.1	BVU_0374	BVU_RS01910	conserved hypothetical protein [Phocaeicola vulgatus ATCC 8482]	3.25	2	4
ABR38094.1	BVU_0375	BVU_RS01915	conserved hypothetical protein [Phocaeicola vulgatus ATCC 8482]	2.25	1.25	2
ABR38096.1	BVU_0377	BVU_RS01920	peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Phocaeicola vulgatus ATCC 8482]	0	2	0
ABR38099.1	BVU_0380	BVU_RS01935	two-component system sensor histidine kinase, with response regulator receiver domain [Phocaeicola vulgatus ATCC 8482]	2.75	0	0
ABR38103.1	BVU_0384	BVU_RS01955	3-oxoacyl-[acyl-carrier protein] reductase [Phocaeicola vulgatus ATCC 8482]	20	23.75	27.75
ABR38113.1	BVU_0395	BVU_RS02010	hypothetical protein BVU_0395 [Phocaeicola vulgatus ATCC 8482]	10	4.5	5.5
ABR38120.1	BVU_0402	BVU_RS02055	putative cysteine synthase [Phocaeicola vulgatus ATCC 8482]	0	1.5	2.75
ABR38123.1	BVU_0408	BVU_RS02085	tryptophanyl-tRNA synthetase [Phocaeicola vulgatus ATCC 8482]	3.25	2.25	0
ABR38124.1	BVU_0409	BVU_RS02090	hypothetical protein BVU_0409 [Phocaeicola vulgatus ATCC 8482]	19	7.5	8.5
ABR38125.1	BVU_0410	BVU_RS02095	glutamine-dependent carbamyl phosphate synthetase [Phocaeicola vulgatus ATCC 8482]	83.75	29	4.75
ABR38127.1	BVU_0412	BVU_RS02105	putative protein disulfide isomerase [Phocaeicola vulgatus ATCC 8482]	0	0	0.75
ABR38129.1	BVU_0414	BVU_RS02115	major outer membrane protein OmpA [Phocaeicola vulgatus ATCC 8482]	417.25	912.25	1338.25
ABR38135.1	BVU_0420	BVU_RS02145	CysQ, sulfite synthesis pathway protein [Phocaeicola vulgatus ATCC 8482]	0	0.75	0
ABR38136.1	BVU_0421	BVU_RS02150	conserved hypothetical exported protein [Phocaeicola vulgatus ATCC 8482]	2.5	1.5	1.25
ABR38137.1	BVU_0422	BVU_RS02155	DNA mismatch repair protein mutL [Phocaeicola vulgatus ATCC 8482]	0	3	4.5
ABR38138.1	BVU_0423	BVU_RS02160	conserved hypothetical protein [Phocaeicola vulgatus ATCC 8482]	0	0	3
ABR38140.1	BVU_0425	BVU_RS02170	peptidyl-prolyl cis-trans isomerase [Phocaeicola vulgatus ATCC 8482]	7.75	9	6.75
ABR38141.1	BVU_0426	BVU_RS02175	conserved hypothetical protein [Phocaeicola vulgatus ATCC 8482]	5	0.75	0
ABR38143.1	BVU_0428	BVU_RS02185	inosine-5'-monophosphate dehydrogenase [Phocaeicola vulgatus ATCC 8482]	25	28.75	28.75
ABR38157.1	BVU_0442	BVU_RS02265	ATP-dependent DNA helicase recQ [Phocaeicola vulgatus ATCC 8482]	9	12	4.25
ABR38158.1	BVU_0443	BVU_RS02270	ATP-dependent Clp protease ATP-binding subunit [Phocaeicola vulgatus ATCC 8482]	3.5	4.5	3.5

100

Name	Locus tag	Function/EC No.	1/2ODmax	ODmax	ODstat
glycine biosynthesis I
GlyA	BVU_RS16795	serine hydroxymethyltransferase	7	18	18
glycine biosynthesis II
GcvP	BVU_RS15125	glycine dehydrogenase	0	2	0
L-alanine biosynthesis I
-	BVU_RS06885	cysteine desulfurase	0	0	1
L-arginine biosynthesis (via L-ornithine)
ArgB	-	-	-	-	-
ArgB	BVU_RS06775	putative acetylglutamate kinase	0	0	1
-	BVU_RS03000	N-acetyl-gamma-glutamyl-phosphate reductase	3	2	2
-	BVU_RS02995	acetylornithine aminotransferase	3	4	5
-	BVU_RS07505	-	-	-	-
-	BVU_RS20030	carbamyl phosphate synthetase	28	13	3
-	BVU_RS20035	glutamine-hydrolyzing carbamoyl phosphate synthetase III	2	5	4
-	BVU_RS20255	-	-	-	-
-	BVU_RS02095	glutamine-dependent carbamyl phosphate synthetase	84	29	5
-	BVU_RS02805	ornithine carbamoyltransferase	3	3	4
-	BVU_RS03005	argininosuccinate synthase	6	9	7
ArgH	-	-	-	-	-
L-asparagine biosynthesis I
AsnB	-	asparagine synthase B	-	-	-
L-asparagine biosynthesis II
-	BVU_RS20790	asparagine synthase A	6	6	0
L-aspartate biosynthesis
-	BVU_RS11395	aspartate 4-decarboxylase	0	0	1
L-cystein biosynthesis I
-	BVU_RS05520	serine acetyltransferase	0	0	1
CysK	BVU_RS02055	cysteine synthase A	0	2	3
L-cystein biosynthesis IV
-	BVU_RS05985	S-adenosylmethionine synthase	3	3	3
-	BVU_RS07105	2.1.1.- / S-adenosyl-methyltransferase	0	0	2
-	BVU_RS04530	S-adenosylhomocysteine nucleosidase	1	2	1
-	BVU_RS04535	S-ribosylhomocysteine lyase	0	0	2
-	-	4.2.1.22	-	-	-
-	BVU_RS10335	2.5.1.48 / homoserine O-succinyltransferase	0	0	1
L-glutamate biosynthesis II
-	BVU_RS01250	glutamate dehydrogenase	77	66	43
-	BVU_RS01255	glutamate dehydrogenase	23	17	10
L-glutamate biosynthesis III
	BVU_RS01275	glutamate dehydrogenase	0	10	12
-	BVU_RS01250	glutamate dehydrogenase	77	66	43
L-glutamine biosynthesis I
-	BVU_RS17720	glutamine synthetase	0	1	0
-	BVU_RS17970	glutamine synthetase	10	13	8
-	BVU_RS20050	glutamine synthetase	-	-	-
L-histidine biosynthesis
-	BVU_RS11880	ATP phosphoribosyltransferase	0	1	0
-	BVU_RS19330	-	-	-	-
HisA	BVU_RS19320	5.3.1.16	4	3	4
HisH	BVU_RS20510	4.3.2.-	1	0	0
HisB	BVU_RS11895	histidinol-phosphate aminotransferase	-	-	-
HisC	BVU_RS11890	2.6.1.9	-	-	-
-	BVU_RS17605		-	-	-
HisD	BVU_RS11885	histidinal dehydrogenase	-	-	-
L-homocysteine biosynthesis
-	BVU_RS10335	homoserine O-succinyltransferase	0	0	1
-	BVU_RS03900	O-acetylhomoserine (thiol)-lyase	4	2	1
-	BVU_RS13630	O-acetylhomoserine (thiol)-lyase	7	4	7
L-homoserine biosynthesis
-	BVU_RS10375	putative aspartokinase I-homoserine dehydrogenase	26	21	9
-	BVU_RS19340	aspartokinase	13	11	8
-	BVU_RS01045	aspartate-semialdehyde dehydrogenase	22	33	31
L-isoleucine biosynthesis I
-	BVU_RS19515	threonine ammonia-lyase	-	-	-
IlvB	BVU_RS12865	acetolactate synthase large subunit	2	0	0
IlvN	BVU_RS12870	acetohydroxyacid synthase small subunit	9	13	14
IlvC	BVU_RS12880	ketol-acid reductoisomerase	22	24	26
-	BVU_RS12860	dihydroxy-acid dehydratase	6	6	5
-	BVU_RS01360	branched-chain amino acid aminotransferase	7	24	18
L-isoleucine biosynthesis IV
-	BVU_RS02915	propanoate:CoA ligase (AMP-forming)	-	-	-
-	BVU_RS00045	Long-chain-fatty-acid--CoA ligase	-	-	-
-	BVU_RS19410	Long-chain-fatty-acid--CoA ligase	-	-	-
-	BVU_RS15255	Long-chain-fatty-acid--CoA ligase	-	-	-
-	BVU_RS07510	Long-chain-fatty-acid--CoA ligase	-	-	-
-	BVU_RS04995	Long-chain-fatty-acid--CoA ligase	-	-	-
-	BVU_RS04960	Long-chain-fatty-acid--CoA ligase	-	-	-
IlvB	BVU_RS12865	acetolactate synthase large subunit	2	0	0
IlvN	BVU_RS12870	acetohydroxyacid synthase small subunit	9	13	14
IlvC	BVU_RS12880	ketol-acid reductoisomerase	22	24	26
-	BVU_RS12860	dihydroxy-acid dehydratase	6	6	5
-	BVU_RS01360	branched-chain amino acid aminotransferase	7	24	18
L-leucine biosynthesis
-	BVU_RS10160	2-isopropylmalate synthase	9	11	8
-	BVU_RS10175	2-isopropylmalate synthase	0	1	0
LeuC	BVU_RS10165	3-isopropylmalate dehydratase large subunit	7	10	6
LeuD	BVU_RS10170	3-isopropylmalate dehydratase small subunit	1	0	0
LeuB	BVU_RS10180	3-isopropylmalate dehydrogenase	3	3	2
-	BVU_RS01360	branched-chain amino acid aminotransferase	7	24	18
L-lysine biosynthesis III
-	BVU_RS10375	putative aspartokinase I-homoserine dehydrogenase	26	21	6
-	BVU_RS19340	aspartokinase	13	11	8
-	BVU_RS01045	aspartate-semialdehyde dehydrogenase	22	33	31
-	BVU_RS16620	putative dihydrodipicolinate synthase	1	4	3
DapB	-	-	-	-	-
-	BVU_RS08435	putative oxidoreductase	22	40	68
LysA	BVU_RS19345	diaminopimelate decarboxylase	2	3	1
-	BVU_RS20260	-	-	-	-
L-lysine biosynthesis VI

Name	Locus tag	function/EC No.	1/2ODmax	ODmax	ODstat
5-aminoimidazole ribonucleotide biosynthesis II
-	BVU_RS04370	-	-	-	-
-	BVU_RS19210	-	-	-	-
-	BVU_RS20040	-	-	-	-
-	BVU_RS05540	phosphoribosylamine--glycine ligase	3	3	3
-	BVU_RS13930	phosphoribosylglycinamide formyltransferase 2	1	6	5
-	BVU_RS00400	putative phosphoribosylformylglycinamidine synthase	17	10	1
-	BVU_RS00475	putative phosphoribosylformylglycinamidine cyclo-ligase	1	2	1
adenine and adenosine salvage I
-	BVU_RS08145	purine nucleoside phosphorylase I	0	4	7
-	BVU_RS06135	adenine phosphoribosyltransferase	1	1	2
adenine and adenosine salvage IV
-	BVU_RS04245	-	-	-	-
adenosine deoxyriboculeotide de novo synthesis
-	BVU_RS15615	ribonucleoside-diphosphate reductase subunit B	0	0	1
-	BVU_RS15620	-	-	-	-
-	BVU_RS02410	nucleoside diphosphate kinase	0	0	4
CMP phosphorylation
-	BVU_RS09815	-	-	-	-
-	BVU_RS02410	nucleoside diphosphate kinase	0	0	4
guanine and guanosin salvage
-	BVU_RS08145	purine nucleoside phosphorylase I	0	4	7
Hpt	BVU_RS08545	putative hypoxanthine guanine phosphoribosyltransferase	0	3	5
Xpt	BVU_RS12750	xanthine phosphoribosyltransferase	1	0	0
guanosine deoxyriboculeotide de novo synthesis
-	BVU_RS15615	ribonucleoside-diphosphate reductase subunit B	0	0	1
-	BVU_RS15620	-	-	-	-
-	BVU_RS02410	nucleoside diphosphate kinase	0	0	4
pyrimidine deoxyribonucleosides salvage
-	BVU_RS09765	cytidine/deoxycytidylate deaminase	0	2	3
-	BVU_RS09305	-	-	-	-
-	BVU_RS09885	putative thymidylate synthase B	1	0	1
-	BVU_RS09305	-	-	-	-
-	-	2.7.1.74	-	-	-
pyrimidine deoxyribonucleostide phosphorylation
-	BVU_RS09815	-	-	-	-
-	BVU_RS02410	nucleoside diphosphate kinase	0	0	4
-	-	2.7.4.9/12/13;	-	-	-
-	BVU_RS02410	nucleoside diphosphate kinase	0	0	4
pyrimidine deoxyriboculeotide de novo synthesis
-	-	3.6.1.15;	-	-	-
	BVU_RS00015	putative ribonucleoside reductase	8	5.75	2
-	BVU_RS15615	ribonucleoside-diphosphate reductase subunit B	0	0	1
-	BVU_RS15620	-	-	-	-
-	BVU_RS02410	nucleoside diphosphate kinase	0	0	4
-	BVU_RS15615	ribonucleoside-diphosphate reductase subunit B	0	0	1
-	BVU_RS15620	-	-	-	-
-	BVU_RS02410	nucleoside diphosphate kinase	0	0	4
-	BVU_RS07130	deoxyuridine 5'-triphosphate nucleotidohydrolase	1	0	1
-	BVU_RS01730	-	-	-	-
-	BVU_RS12965	-	-	-	-
-	BVU_RS09885	putative thymidylate synthase B	1	0	1
-	-	2.7.4.9/12/13;	-	-	-
-	BVU_RS02410	nucleoside diphosphate kinase	0	0	4
pyrimidine nucleobases salvage I
-	BVU_RS04955	-	-	-	-
-	BVU_RS04990	-	-	-	-
pyrimidine ribonucleosides salvage I
	BVU_RS16775	cytidine/deoxycytidylate deaminase	0	2	3
-	BVU_RS11865	uridine kinase	0	0	1
-	-	2.7.1.213;	-	-	-
UMP biosynthesis II
-	BVU_RS20030	carbamoyl phosphate synthetase	28.25	13.25	3.25
-	BVU_RS20035	glutamine-hydrolyzing carbamoyl phosphate synthetase III	2.25	5.25	4.25
-	BVU_RS20255	-	-	-	-
-	BVU_RS02095	glutamine-dependent carbamyl phosphate synthetase	84	29	5
PyrB	-	aspartate carbamoyltransferase catalytic chain	0	2	0
-	BVU_RS16780	aspartate carbamoyltransferase regulatory chain	1	2	3
-	BVU_RS11365	dihydroorotase	0	0	1
-	BVU_RS19405	putative dihydroorotate dehydrogenase	0	3	2
-	BVU_RS04365	orotate phosphoribosyltransferase	13	36	48
PyrF	BVU_RS00485	orotidine 5'-phosphate decarboxylase	0	0	1.5
UMP biosynthesis III
-	BVU_RS20030	carbamyl phosphate synthetase	28.25	13.25	3.25
-	BVU_RS20035	glutamine-hydrolyzing carbamoyl phosphate synthetase III	2.25	5.25	4.25
-	BVU_RS20255	-	-	-	-
-	BVU_RS02095	glutamine-dependent carbamyl phosphate synthetase	84	29	5
PyrB	BVU_RS16775	aspartate carbamoyltransferase catalytic chain	0	2	0
-	BVU_RS16780	aspartate carbamoyltransferase regulatory chain	1	2	3
-	BVU_RS11365	dihydroorotase	0	0	1
-	BVU_RS16640	-	-	-	-
-	BVU_RS04365	orotate phosphoribosyltransferase	13	36	48
PyrF	BVU_RS00485	orotidine 5'-phosphate decarboxylase	0	0	1.5
UTP and CTP de novo biosynthesis
-	BVU_RS09490	uridylate kinase	1	1	1
-	BVU_RS09815	-	-	-	-
-	BVU_RS02410	nucleoside diphosphate kinase	0	0	4
-	BVU_RS16855	CTP synthase	9.5	8.25	3.25

Name	Locustag	function/EC No.	1/2ODmax	ODmax	ODstat
fatty acid biosynthesis initiation I
AccC	-	-	-	-	-
FabD	BVU_RS19990	malonyl CoA-acyl carrier protein transacylase	5	9	6
-	BVU_RS02315	3-oxoacyl-[acyl-carrier-protein] synthase III	12	6	2
fatty acid elongation -- saturation
-	BVU_RS01955	3-oxoacyl-[acyl-carrier protein] reductase	20	24	28
FabG		-	-	-	-
-	BVU_RS00500	UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase	33	15	8
FabG	BVU_RS10065	enoyl-[acyl-carrier-protein] reductase	10	15	20
FabG	-	-	-	-	-
-	BVU_RS05130	-	-	-	-
palmitate biosynthesis II
-	BVU_RS01955	3-oxoacyl-[acyl-carrier protein] reductase	20	24	28
FabG		-	-	-	-
-	BVU_RS00500	UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase	33	15	8
FabG	-	-	-	-	-
-	BVU_RS05130	-	-	-	-
-	BVU_RS12875	-	-	-	-
-	BVU_RS05130	-	-	-	-
-	BVU_RS12875	-	-	-	-
-	BVU_RS00045	-	-	-	-
-	BVU_RS19410	-	-	-	-
-	BVU_RS15255	-	-	-	-
-	BVU_RS07510	-	-	-	-
lipid IVA biosynthesis
-	BVU_RS00505	acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase	0	1.75	3.5
-	BVU_RS00500	UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase	33	15	8
-	BVU_RS00495	UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase	1	2.25	0.75
-	BVU_RS15065	-	-	-	-
-	BVU_RS02680	-	-	-	-
LpxB	BVU_RS09710	-	-	-	-
LpxK	BVU_RS08150	-	-	-	-
palmitoleate biosynthesis I
-	BVU_RS05130	-	-	-	-
-	BVU_RS01955	3-oxoacyl-[acyl-carrier protein] reductase	20	24	28
-	BVU_RS00500	UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase	33	15	8
FabG		-	-	-	-
-	BVU_RS05130	-	-	-	-
-	BVU_RS12875	-	-	-	-
CDP-diacylglycerol biosynthesis I
-	BVU_RS02595	-	-	-	-
-	-	2.3.1.15;	-	-	-
-	BVU_RS11350	-	-	-	-
-	BVU_RS09720	-	-	-	-
phophatidylethanolamine biosynthesis I
-	BVU_RS09540	-	-	-	-
-	BVU_RS09545	phosphatidylserine decarboxylase	0.75	0	0
gondoate biosynthesis I (anaerobic)
-	BVU_RS05130	-	-	-	-
-	BVU_RS01955	3-oxoacyl-[acyl-carrier protein] reductase	20	24	28
-	BVU_RS00500	UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase	33	15	8
FabG		-	-	-	-
stearate biosynthesis II
-	BVU_RS05130	-	-	-	-
-	BVU_RS01955	3-oxoacyl-[acyl-carrier protein] reductase	20	24	28
-	BVU_RS00500	UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase	33	15	8
FabG	-	-	-	-	-
-	BVU_RS05130	-	-	-	-
-	BVU_RS12875	-	-	-	-
-	BVU_RS00045	-	-	-	-
-	BVU_RS19410	-	-	-	-
-	BVU_RS15255	-	-	-	-
-	BVU_RS07510	-	-	-	-
peptidoglycan biosynthesis I
MurA	-	-	-	-	-
-	BVU_RS11270	-	-	-	-
-	BVU_RS07065	-	-	-	-
Murl	-	-	-	-	-
MurD	-	-	-	-	-
-	BVU_RS07090	-	-	-	-
-	BVU_RS02785	D-alanine--D-alanine ligase	0	0.75	0
-	BVU_RS08970	-	-	-	-
-	BVU_RS02365	-	-	-	-
MraY	-	2.7.8.13;	-	-	-
MurG	-	-	-	-	-

Name

average 1/2ODmax

average ODmax

average ODstat

F23-30

3,6-dimethyl-2,5-piperazinedione

8265378.743

1.099494342E7

1.384175322E7

(4-hydroxyphenyl)acetate

1420991.782

4245243.065

adenosine

1.914616041E8

2.049224602E8

4.368890932E7

AMP

2.542298812E7

alanine

3.048153434E8

1023598628

4.595991406E8

beta-Alanine

1.076268625E7

1.472702677E7

1.153525451E7

arabinose

7.267107188E7

5.558992709E7

asparagine

9194929.216

1.065020677E8

4.63419194E7

aspartate

1336480732

2.561961123E9

1979001674

N-acetyl-aspartate

1.430374177E7

1.358601966E7

1.834177997E7

4-hydroxybutanoate

4341238.489

1.611925834E7

3.671945556E7

citraconic acid

3044486.818

2.246157863E7

3.030884869E7

citrate

2.312309536E7

137330468

8.736149751E7

cytosine

2.809813669E7

8.62736557E7

3.474310703E7

erythritol

5054322.738

1.778982275E7

1.638248006E7

erythronic acid

2.272937928E7

3.634991079E7

2.688512397E7

erythrose

2.787263181E7

5.955155986E7

6765894.403

ethanolamine

4.969040726E7

1.530971721E8

3.033750008E8

ethanolaminephosphate

2.546777747E7

2.813185905E7

9443448.536

fructose

1.850946281E8

1.257242206E8

fructose-6-phosphate

2.849009979E8

1.242458087E8

fumarate

2.404458386E8

5.637002336E8

6.521516803E8

gluconic-acid

2.568004851E8

1.181679281E8

9550974.311

N-acetyl-glucosamine

9768310.857

7213146.982

glucose-6-phosphate

4.067897086E8

1.828808347E8

glutamate

1340216244

6.658121568E9

1169145644

glutamine

2.056023878E8

4.190071894E8

2.240359272E8

2-hydroxy-glutarate

3.294905939E7

3.590857646E7

glyceraldehyde

7750331.635

2.298763835E7

1.335637885E7

glycerate

3.755884754E8

2.740662649E8

1.147235845E8

2-phosphoglycerate

4572553.126

3-phosphoglycerate

2.302342533E7

3.439023367E7

5846386.359

glycerol

4.661167241E7

6.570150232E7

6.856078056E7

glycerol-3-phosphate

1.041908498E7

1.718752623E8

1.772606967E8

glycine

6.209431422E8

2057670347

4.592510717E8

glycolate

1.405411682E7

2.059001147E7

1.808473331E7

homoserine

3.335082045E8

3.591716395E8

1.399917335E7

N-2-oxocaproyl-homoserine lactone

1.517760032E7

1.867238667E7

2.293308736E7

N-2-oxooctanyol-DL-homoserine lactone

11635.331750000001

N-hexanoyl-homoserine lactone

3740822.157

homoserine-lactone

1.809613475E7

1.95027542E7

2.570292888E7

indole-3-acetaldehyde

4383476.133

9365954

8288216.327

indole-3-acetic acid

4.691573849E7

7820113.983

indole-3-lactate

2186880.9

2630974.483

2594399.649

myoinositol-2-phosphate

1.775189535E7

2.390872067E7

5423904.234

isoleucine

1.374542193E8

3.199794331E8

1.217658453E8

lactate

4.274263196E8

8.536903754E8

9.656382479E8

leucine

5.790712841E8

1439535415

5.516541295E8

maleamate

4192487.17

5795711.583

5199904.97

malate

3.923954001E8

848322731

8.097098594E8

2-isopropylmalic acid

2.890969401E7

2-methyl-malate

6.080885221E7

1.079938159E8

4.788533355E7

maltose

1.326685341E8

133750122

1800785.279

3,4-dihydroxy-mandelic acid

8064132.172

8749595.731

1.079897095E7

mannose

4.487437963E8

252336952

1.393508464E7

mannose-6-phosphate

9.636200797E7

5.955190153E7

methionine

2034513.532

7.628279346E7

2.730399671E8

Nicotinamide

1.258987794E8

501164642

3.260022908E8

nicotinic acid

1.170017169E8

2.097302329E8

4.873414118E8

phenylacetate

2956646.363

4456889.651

9633215.127

phenylalanine

4.388546669E8

4.935537981E8

1.789371058E8

phenylpyruvate

2956401.783

3496928.418

2585520.354

phosphoenolpyruvate

7904362.188

1.402691499E7

5128633.264

proline

2.666568981E8

1511423646

1605577602

2-amino-2-methyl-3-hydroxy-propanoate

3.371460358E7

putrescine

1.005640698E7

1.171328886E7

pyroglutamate

2.540546723E9

4.104969694E9

3.284833895E9

pyrophosphate

9.711275107E7

pyruvate

5.764449038E7

1.054069723E8

4.67062416E7

3-hydroxypyruvate

2.813426578E7

3.874564615E7

4.709903788E7

rhamnose

5467552.28

7287586.92

ribitol

1000000000

ribose

694367707

5.328332125E8

4.384904984E8

sedoheptulose-7-phosphate

5.917838268E7

7.411755046E7

3993024.476

serine

1276441786

3.335129505E9

7.695622812E8

cycloserine

5.084750116E7

2.600599198E8

8.100619203E7

N-acetyl-serine

1.059336746E8

1.842237611E8

3-dehydroshikimate

2915323.859

3497219.62

1688258.611

spermine

3541465.43

4704480.265

3252199.329

succinate

2.657480135E9

4.484433305E9

5.284361116E9

threonine

1749332247

3.39003851E9

8.915184433E7

threose

3516783.548

4772561.199

5178304.532

thymine

589083380

6.178797086E8

2.814467823E8

tryptophan

2539672.872

4857143.382

6075927.328

tyrosine

9.550352555E7

1.368401247E8

7.821043712E7

Unknown#1325.8-pin-mhe_007

2.746316097E7

3.831566682E7

3.146717502E7

Unknown#1366.59-ppu-cja_010

1.028040972E8

1.286606871E8

3.83307523E7

Unknown#1366.9-pin-mhe_011

5.100790519E7

Unknown#1392.1-pin-mhe_012

8.392893011E7

Uracil

1702329403

2117311135

1641307740

uridine

1.474320764E7

8750848.652

valine

9.230785067E8

2.592221665E9

3.434458049E8

xylitol

2.239443265E7

xylose

1.166395907E7

1.05930369E7

3438379.921

xylulose

7.952552253E7

7.546167784E7

xylulose-5-phosphate

855942.3938

1592458.039

CoA	1/2ODmax				ODmax				Odstat
CoenzymeA	4912868	4693358	4415376	4029986	7999299	5436994	5471682	7341028	3722929	3119229	3701465	3818397
Acetyl-CoA	58415094	60965398	63465947	60060491	45393976	31968886	35167580	45404304	44039022	39014335	41993660	38573573
Propenoyl-CoA	2135768	2095049	1494035	1733782	337249	305428	301575	250793	223376	182202	258149	281767
Propanoyl-CoA	5023647	5226892	4527377	4287440	1943418	2347079	1925851	2219608	7656282	5159891	6943862	6861228
Butanoyl-CoA	4776301	5393140	4026315	5894770	20097739	17224231	12407080	17225271	14975138	14403527	11433604	11987066
Isobutanoyl-CoA	4371966	4922817	4109338	4505565	15840788	14356691	11994533	13954118	8893864	8921627	6932793	9596689
(S)-2-Methylbutanoyl-CoA	9949737	10129657	8731578	8150428	15483160	15620341	18433654	20650339	44850423	36776164	32778771	48635322
Isovaleryl-CoA	4999600	4500310	3911202	3374602	25918635	19124343	20376423	23534793	55823717	35807178	53743495	46561363
Pentanoyl-CoA	824233	868427	721083	755892	1771268	1402055	1438430	1969274	5972812	6884757	6884792	7280826
Malonyl-CoA	177622	217814	177321	233897	732199	626023	648105	713322	871181	1022431	866700	887095
Methylmalonyl-CoA	5123649	4195843	3916541	3763798	2875768	1995122	2569047	1923211	9979938	7408454	9096165	10471671
Succinyl-CoA	21169812	17919356	22625778	14636368	19358027	22797158	14771345	17849154	31131938	26989307	33768034	33003571
Cyclohexa-1,5-dienecarbonyl-CoA	1227884	1306538	925570	1214402	2339858	2739259	2490548	2597333	7394661	5144411	8170709	7629941
Cyclohex-1-ene-1-carboxyl-CoA	221606	177166	155359	182230	1090067	856545	745147	857469	595135	746863	741959	566189
Methylsuccinyl-CoA	430019	486722	340381	425041	396548	429238	333357	396585	485835	408756	350739	325660
C28H42N7O18P3S, similar to beta-(2-Furyl)propionyl-CoA	1739194	1817161	1652515	1545113	1034390	1076613	1304001	1434617	605293	588617	823728	772815
C29H41N8O17P3S, exact mass based	1956558	1959717	1510641	1436500	11001764	9401792	8029753	10627222	9750493	8677756	9005034	11810337
Phenylglyoxylyl-CoA	81301	97570	84085	88380	883414	781849	817047	1053451	1346654	1350960	1368696	1943608
C29H43N8O17P3S, similar to N-Methylanthraniloyl-CoA	3621909	4315683	2862026	3731336	3989842	4396538	3225252	3857268	1260793	990580	1201589	1246272
2,3-Dihydro-2,3-dihydroxybenzoyl-CoA	610018	585519	641224	594254	1103750	1019841	903896	818590	473518	456067	498651	496308

100

Name	average 1/2ODmax	average ODmax	average ODstat
(4-hydroxyphenyl)acetate	0	0	9289.599772
1,6-anhydro-glucose	13241.09054	21598.00354	5276.194721
1-O-methyl-alpha-glucopyranoside	120221.2645	22595.36598	0
1-pyrroline-2-carboxylate	11399.37926	12334.10381	12984.44374
2,4-dihydroxybutanoate	23100.79123	17651.50354	17132.32856
2-amino-2-methylpropane-1,3-diol	17292.52606	304397.5939	119436.4133
2-aminobutanoate	13801.57337	64058.93625	18782.03809
2-aminoisobutanoate	1846.437294	2522.104867	981.3441083
2-hydroxy-4-(methylthio)butanoate	1062.234506	4951.057944	21931.4075
2-hydroxybutanoate	0	21893.13429	20704.05855
2-hydroxy-glutarate	9126.16993	93357.42608	124743.2806
2-hydroxyisocaproate	0	6154.527856	7563.933773
2-isopropylmalic acid	9318.271904	32305.2513	26006.79167
2-methyl-malate	47322.16999	147337.0056	148228.6592
2-oxobutanoate	1706.542423	5182.400179	1972.253655
2-oxoglutarate	3825.152833	16351.44434	8373.118877
3,4-dihydroxybenzoate	2154.914701	2729.888575	1818.869325
3-aminoisobutanoate	51072.72964	53180.989	52068.8065
3-dehydroshikimate	0	4274.800011	2519.69768
3-hydroxybenzoate	1118.434005	1577.661383	1487.247318
3-hydroxyindole	145483.7357	145062.1962	161133.4753
3-hydroxyisobutanoate	1443.406185	2030.471884	4677.262604
3-hydroxyisovaleric acid	0	0	13350.90751
4-hydroxybenzoate	4347.213233	9265.616971	6439.181642
4-hydroxybutanoate	8341.833798	57319.67342	130046.4036
4-hydroxyphenylacetonitrile	1702.447467	1965.253942	2211.86605
4-oxobutanoate	0	2897.024902	2276.482706
4-oxopentanoic acid	12512.22651	14994.85326	15058.76188
6-deoxy-mannose	115413.7129	40962.12844	1007.050309
alanine	186437.366	675858.5938	377179.5159
aminomalonic acid	0	32029.00758	30254.65806
arabinonate	2480.46599	2885.912754	826.9863153
arabinono-1,4-lactone	6041.827278	8305.663046	0
arabinose	113599.8842	18742.39801	0
asparagine	0	3974.843049	0
aspartate	0	22641.73173	0
benzene-1,2,4-triol	2685.662953	6543.742449	9444.725211
benzoate	164377.0865	214497.77	234102.4865
beta-Alanine	111004.0078	17010.72479	25348.08442
butylamine	2583.330356	7800.087292	3031.189135
citraconic acid	13291.46357	20733.4688	14481.70315
citrate	19032.68054	31779.28151	26073.8232
cysteine	0	8649.927068	7935.665552
diethylene glycol	114075.8286	126325.7524	147065.7096
erythritol	6432.784773	20202.39974	35682.00093
erythronic acid	17425.01564	52475.53757	36736.3588
erythronic acid-1,4-lactone	5212.858485	16058.7725	12997.351
erythrose	21921.41473	78241.62423	44883.12959
ethanolamine	30960.5817	139357.8415	274287.2696
fructose	518667.171	284286.21	3647.387377
fumarate	74158.3667	89377.55297	77311.96085
galactose	287798.7167	136190.6944	0
gluconic-acid	53450.97373	24254.20329	5112.018837
glucose	1401777.391	680722.0745	148902.9758
glutamine	96326.14762	126582.3145	142426.8809
glyceraldehyde	9937.889679	26075.91615	15092.50598
glycerate	38642.76494	138259.5499	57055.02788
glycerol-3-phosphate	0	2377.851981	1843.756899
glycine	25679.78888	117986.9177	76740.94961
glycolate	7575.441393	14218.2835	10748.57535
hydrocinnamic acid	18962.46781	28176.20618	28493.75941
hydroquinone	5964.373506	1497.075992	1384.895708
hydroxylamine	42642.97452	54994.37608	55226.30733
indole-3-lactate	0	510.5191295	568.7783619
isocaproate	0	5383.709628	3284.426331
isoleucine	16528.71098	38714.57974	18782.29433
isomaltose*	285.1419036	630.276348	0
lactate	782860.4662	994265.4398	1215024.733
laminaribiose*	3458.983938	8499.335859	606.5945435
leucine	0	54179.53124	24567.30548
malate	415601.0876	965945.4366	945762.7512
maleate	7494.438311	42037.55822	21269.74702
malonamide	313710.7895	438380.1751	386739.6702
malonic acid	0	1656.04694	1719.925459
mannonic acid-1,4-lactone	0	492.9970468	0
mannose	159580.4492	47561.44195	0
mannosylglycerate	8411.381146	0	0
methyl 3,6-anhydro-alpha-galactopyranoside	3513.663272	4304.23687	3661.989529
myo-inositol	0	850.0713329	0
N-acetyl-galactosamine	3671.443836	629.3391122	0
N-acetyl-glucosamine	4287.622265	1006.047384	0
N-acetyl-phenylalanine	0	0	972.2001417
nicotinic acid	21321.99894	26841.36041	121129.9429
oxalate	9393.353043	11625.98082	10514.72433
phenylpyruvate	2495.374715	4905.818014	4074.834533
proline	54337.72263	963555.2114	789359.9671
propane-1,2-diol	12926.23761	15962.30631	31277.14495
propane-1,3-diol	105286.998	53200.53431	0
putrescine	8087.277356	0	0
pyridoxal	0	1363.784526	519.1638029
pyroglutamate	51637.52579	282849.0538	157454.2446
pyrrole-2-carboxylate	6045.629836	12082.07825	8520.154384
pyruvate	126135.6008	41206.06283	13904.45386
quinate	1138.771335	1889.73512	1362.196213
ribonate	3637.443671	6401.706855	4352.95201
ribose	35320.99403	54534.9951	38510.98767
shikimic acid	0	130438.5169	74191.88895
sorbitol	7360.274366	0	0
succinate	2298.598083	2452304.88	2784346.948