Selected Cell
Cell:
Value:
Outline
1P_vulgatus_ATCC_8482
2Proteomic_data
3Amino_acids
4Nucleotide
5Fatty_acdis_cell_wall
6Metabolites
7Metabolome_CoA
8Exo_Metabolome
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| Tab | Name | Contents | |||||||
| 1 | 1P_vulgatus_ATCC_8482 | Genome of P. vulgatus ATCC 8482 | |||||||
| 2 | 2Proteomics_data | Identified proteins with peptide counts | |||||||
| 3 | 3Amino_acids | BioCyc-predicted biosynthesis of amino acids including identified proteins | |||||||
| 4 | 4Nucleotide | BioCyc-predicted biosynthesis of nucleotides including identified proteins | |||||||
| 5 | 5Fatty_acdis_cell_wall | BioCyc-predicted biosynthesis of fatty acids and cell wall including identified proteins | |||||||
| 6 | 6Metabolites | Metabolites of the intracellular metabolome | |||||||
| 7 | 7Metabolome_CoA | CoAs of the metabolome | |||||||
| 8 | 8Exo_Metabolome | Metabolites of the extracellular metabolome | |||||||
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| BVU_RS09380 | BVU_1851 | 2407351 | 2408829 | 492 | BVU_RS09380 | RagB/SusD family nutrient uptake outer membrane protein | |||
| BVU_RS09385 | BVU_1852 | 2409119 | 2412010 | 963 | BVU_RS09385 | TonB-dependent receptor | |||
| BVU_RS09390 | BVU_1853 | 2412023 | 2413519 | 498 | BVU_RS09390 | RagB/SusD family nutrient uptake outer membrane protein | |||
| BVU_RS09395 | BVU_1854 | 2413702 | 2416719 | 1005 | BVU_RS09395 | TonB-dependent receptor | |||
| BVU_RS09400 | BVU_1855 | 2416743 | 2418329 | 528 | BVU_RS09400 | RagB/SusD family nutrient uptake outer membrane protein | |||
| BVU_RS09405 | BVU_1856 | 2418421 | 2419674 | 417 | hflX | GTPase HflX | |||
| BVU_RS09410 | BVU_1857 | 2419688 | 2421673 | 661 | BVU_RS09410 | DUF4954 family protein | |||
| BVU_RS09415 | BVU_1858 | 2421821 | 2423728 | 635 | c | BVU_RS09415 | CocE/NonD family hydrolase | ||
| BVU_RS09420 | BVU_1859 | 2423867 | 2425510 | 547 | BVU_RS09420 | fumarate hydratase | |||
| BVU_RS09425 | BVU_1860 | 2425613 | 2427769 | 718 | BVU_RS09425 | alpha-N-acetylglucosaminidase | |||
| BVU_RS09430 | BVU_1861 | 2427942 | 2429600 | 552 | c | BVU_RS09430 | amino acid permease | ||
| BVU_RS09435 | BVU_1862 | 2429689 | 2431008 | 439 | c | BVU_RS09435 | TolC family protein | ||
| BVU_RS09440 | BVU_1863 | 2431005 | 2434040 | 1011 | c | BVU_RS09440 | efflux RND transporter permease subunit | ||
| BVU_RS09445 | BVU_1864 | 2434060 | 2435136 | 358 | c | BVU_RS09445 | efflux RND transporter periplasmic adaptor subunit | ||
| BVU_RS09450 | BVU_1865 | 2435223 | 2436242 | 339 | c | BVU_RS09450 | M20/M25/M40 family metallo-hydrolase | ||
| BVU_RS09455 | BVU_1866 | 2436256 | 2437188 | 310 | c | rsgA | ribosome small subunit-dependent GTPase A | ||
| BVU_RS09460 | BVU_1867 | 2437309 | 2437869 | 186 | c | frr | ribosome recycling factor | ||
| BVU_RS09465 | BVU_1868 | 2438108 | 2439688 | 526 | BVU_RS09465 | ATP-binding protein | |||
| BVU_RS09470 | BVU_1869 | 2440091 | 2440609 | 172 | BVU_RS09470 | histidine phosphatase family protein | |||
| BVU_RS09475 | BVU_1870 | 2440632 | 2443889 | 1085 | c | BVU_RS09475 | DUF4450 domain-containing protein | ||
| BVU_RS09480 | BVU_1871 | 2443914 | 2446022 | 702 | c | BVU_RS09480 | glycoside hydrolase N-terminal domain-containing protein | ||
| BVU_RS09485 | BVU_1872 | 2446077 | 2447315 | 412 | c | BVU_RS09485 | glycoside hydrolase family 88 protein | ||
| BVU_RS09490 | BVU_1873 | 2447573 | 2448283 | 236 | c | pyrH | 2.7.4.22 | UMP kinase | |
| BVU_RS09495 | BVU_1874 | 2448322 | 2449647 | 441 | c | BVU_RS09495 | MATE family efflux transporter | ||
| BVU_RS09500 | BVU_1875 | 2449806 | 2451173 | 455 | BVU_RS09500 | S41 family peptidase | |||
| BVU_RS09505 | BVU_1876 | 2451330 | 2452688 | 452 | c | BVU_RS09505 | transposase | ||
| BVU_RS09510 | BVU_1877 | 2452933 | 2453700 | 255 | c | BVU_RS09510 | 6.3.4.15 | biotin--[acetyl-CoA-carboxylase] ligase | |
| BVU_RS09515 | BVU_1878 | 2453684 | 2454040 | 118 | c | BVU_RS09515 | MmcQ/YjbR family DNA-binding protein | ||
| BVU_RS09520 | BVU_1879 | 2454058 | 2454423 | 121 | c | BVU_RS09520 | YraN family protein | ||
| BVU_RS09525 | BVU_1880 | 2454499 | 2454732 | 77 | BVU_RS09525 | hypothetical protein | |||
| BVU_RS09530 | BVU_1881 | 2454734 | 2455168 | 144 | BVU_RS09530 | nucleoside deaminase | |||
| BVU_RS09535 | BVU_1882 | 2455172 | 2455474 | 100 | c | BVU_RS09535 | DUF4834 family protein | ||
| BVU_RS09540 | BVU_1883 | 2455527 | 2456234 | 235 | c | BVU_RS09540 | CDP-alcohol phosphatidyltransferase family protein | ||
| BVU_RS09545 | BVU_1884 | 2456246 | 2456932 | 228 | c | BVU_RS09545 | 4.1.1.65 | phosphatidylserine decarboxylase family protein | |
| BVU_RS09550 | BVU_1885 | 2457124 | 2460921 | 1265 | dnaE | 2.7.7.7 | DNA polymerase III subunit alpha | ||
| BVU_RS09555 | BVU_1886 | 2460963 | 2461277 | 104 | trxA | thioredoxin | |||
| BVU_RS09560 | BVU_1887 | 2461313 | 2461648 | 111 | BVU_RS09560 | hypothetical protein | |||
| BVU_RS09565 | BVU_1888 | 2461828 | 2463387 | 519 | BVU_RS09565 | plasmid pRiA4b ORF-3 family protein | |||
| BVU_RS09570 | BVU_1889 | 2463502 | 2463723 | 73 | c | BVU_RS09570 | immunity 17 family protein | ||
| BVU_RS09575 | BVU_1890 | 2463785 | 2464213 | 142 | c | tsaE | tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE | ||
| BVU_RS09580 | BVU_1891 | 2464197 | 2465048 | 283 | c | BVU_RS09580 | metal ABC transporter permease | ||
| BVU_RS09585 | BVU_1892 | 2465101 | 2465520 | 139 | c | BVU_RS09585 | hypothetical protein | ||
| BVU_RS09590 | BVU_1893 | 2465525 | 2466754 | 409 | c | BVU_RS09590 | 3-phosphoshikimate 1-carboxyvinyltransferase | ||
| BVU_RS09595 | BVU_1894 | 2466913 | 2467965 | 350 | c | BVU_RS09595 | 4.1.2.13 | class I fructose-bisphosphate aldolase | |
| BVU_RS09600 | BVU_1895 | 2468117 | 2468878 | 253 | c | gpmA | 5.4.2.11 | 2,3-diphosphoglycerate-dependent phosphoglycerate mutase | |
| BVU_RS09605 | BVU_1896 | 2469042 | 2469830 | 262 | BVU_RS09605 | ADP-ribosylglycohydrolase family protein | |||
| BVU_RS09610 | BVU_1897 | 2469811 | 2470896 | 361 | c | dinB | 2.7.7.7 | DNA polymerase IV | |
| BVU_RS09620 | BVU_1899 | 2471336 | 2472196 | 286 | c | BVU_RS09620 | helix-turn-helix transcriptional regulator | ||
| BVU_RS09625 | BVU_1900 | 2472470 | 2473531 | 353 | c | aroB | 4.2.3.4 | 3-dehydroquinate synthase | |
| BVU_RS09630 | BVU_1901 | 2473629 | 2474033 | 134 | BVU_RS09630 | hypothetical protein | |||
| BVU_RS09635 | BVU_1902 | 2474114 | 2477011 | 965 | BVU_RS09635 | TonB-dependent receptor | |||
| BVU_RS09640 | BVU_1903 | 2477104 | 2478540 | 478 | cls | cardiolipin synthase | |||
| BVU_RS09645 | BVU_1904 | 2478509 | 2479069 | 186 | c | BVU_RS09645 | RsmD family RNA methyltransferase | ||
| BVU_RS09650 | BVU_1905 | 2479060 | 2479884 | 274 | c | BVU_RS09650 | DUF3822 family protein | ||
| BVU_RS09655 | BVU_1906 | 2479887 | 2480573 | 228 | c | BVU_RS09655 | hypothetical protein | ||
| BVU_RS09660 | BVU_1907 | 2480671 | 2482089 | 472 | BVU_RS09660 | AAA family ATPase | |||
| BVU_RS09665 | BVU_1908 | 2482411 | 2485029 | 872 | c | alaS | 6.1.1.7 | alanine--tRNA ligase | |
| BVU_RS09670 | BVU_1909 | 2485169 | 2486137 | 322 | BVU_RS09670 | peptidoglycan DD-metalloendopeptidase family protein | |||
| BVU_RS09675 | BVU_1910 | 2486171 | 2486518 | 115 | BVU_RS09675 | MerR family transcriptional regulator | |||
| BVU_RS09680 | BVU_1911 | 2486610 | 2488880 | 756 | c | BVU_RS09680 | RelA/SpoT family protein | ||
| BVU_RS09685 | BVU_1912 | 2488982 | 2490244 | 420 | c | BVU_RS09685 | lytic transglycosylase domain-containing protein | ||
| BVU_RS09690 | BVU_1913 | 2490249 | 2490956 | 235 | c | BVU_RS09690 | DUF5683 domain-containing protein | ||
| BVU_RS09695 | BVU_1914 | 2491026 | 2491922 | 298 | c | BVU_RS09695 | ParB/RepB/Spo0J family partition protein | ||
| BVU_RS09700 | BVU_1915 | 2491926 | 2492693 | 255 | c | BVU_RS09700 | AAA family ATPase | ||
| BVU_RS09705 | BVU_1916 | 2492951 | 2493724 | 257 | surE | 3.1.3.6 | 5'/3'-nucleotidase SurE | ||
| BVU_RS09710 | BVU_1917 | 2493721 | 2494860 | 379 | lpxB | 2.4.1.182 | lipid-A-disaccharide synthase | ||
| BVU_RS09715 | BVU_1918 | 2494917 | 2495651 | 244 | BVU_RS09715 | NigD-like protein | |||
| BVU_RS09720 | BVU_1919 | 2495643 | 2496482 | 279 | c | BVU_RS09720 | phosphatidate cytidylyltransferase | ||
| BVU_RS09725 | BVU_1920 | 2496641 | 2498647 | 668 | c | ftsH | ATP-dependent zinc metalloprotease FtsH | ||
| BVU_RS09730 | BVU_1921 | 2498665 | 2499024 | 119 | c | rsfS | ribosome silencing factor | ||
| BVU_RS09740 | BVU_1923 | 2499572 | 2501380 | 602 | c | BVU_RS09740 | DUF349 domain-containing protein | ||
| BVU_RS09745 | BVU_1924 | 2501641 | 2502981 | 446 | c | mgtE | magnesium transporter | ||
| BVU_RS09750 | BVU_1925 | 2503013 | 2503855 | 280 | c | rsmA | 2.1.1.182 | 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA | |
| BVU_RS09755 | BVU_1926 | 2503954 | 2504958 | 334 | BVU_RS09755 | flippase-like domain-containing protein | |||
| BVU_RS09760 | BVU_1927 | 2504955 | 2506415 | 486 | BVU_RS09760 | aminoacyl-histidine dipeptidase | |||
| BVU_RS09765 | BVU_1928 | 2506477 | 2506944 | 155 | c | BVU_RS09765 | nucleoside deaminase | ||
| BVU_RS09775 | BVU_1930 | 2507857 | 2508072 | 71 | BVU_RS09775 | helix-turn-helix transcriptional regulator | |||
| BVU_RS09780 | 2508228 | 2508447 | 72.33333333333333 | BVU_RS09780 | hypothetical protein | ||||
| BVU_RS09785 | BVU_1931 | 2508560 | 2514238 | 1892 | BVU_RS09785 | MG2 domain-containing protein | |||
| BVU_RS09790 | BVU_1932 | 2514299 | 2514730 | 143 | c | BVU_RS09790 | hypothetical protein | ||
| BVU_RS09795 | BVU_1933 | 2514861 | 2515937 | 358 | BVU_RS09795 | DUF1573 domain-containing protein | |||
| BVU_RS09800 | BVU_1934 | 2515940 | 2517037 | 365 | meaB | 3.6.5.- | methylmalonyl Co-A mutase-associated GTPase MeaB | ||
| BVU_RS09805 | BVU_1935 | 2517126 | 2518106 | 326 | c | pfkA | 2.7.1.11 | 6-phosphofructokinase | |
| BVU_RS09810 | BVU_1936 | 2518188 | 2519054 | 288 | c | BVU_RS09810 | 1.17.7.4 | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | |
| BVU_RS09815 | BVU_1937 | 2519047 | 2519736 | 229 | c | cmk | 2.7.4.25 | (d)CMP kinase | |
| BVU_RS09820 | BVU_1938 | 2519922 | 2520605 | 227 | BVU_RS09820 | energy transducer TonB | |||
| BVU_RS09825 | BVU_1939 | 2520687 | 2521664 | 325 | BVU_RS09825 | polyprenyl synthetase family protein | |||
| BVU_RS09830 | BVU_1940 | 2521666 | 2522439 | 257 | BVU_RS09830 | TatD family hydrolase | |||
| BVU_RS09840 | BVU_1942 | 2522782 | 2523555 | 257 | BVU_RS09840 | MotA/TolQ/ExbB proton channel family protein | |||
| BVU_RS09845 | BVU_1943 | 2523563 | 2524024 | 153 | BVU_RS09845 | hypothetical protein | |||
| BVU_RS09850 | BVU_1944 | 2524068 | 2524658 | 196 | BVU_RS09850 | biopolymer transporter ExbD | |||
| BVU_RS09855 | BVU_1945 | 2524658 | 2525122 | 154 | BVU_RS09855 | biopolymer transporter ExbD | |||
| BVU_RS09865 | BVU_1946 | 2525314 | 2525850 | 178 | c | BVU_RS09865 | GNAT family N-acetyltransferase | ||
| BVU_RS09870 | BVU_1947 | 2525885 | 2527171 | 428 | c | BVU_RS09870 | IgA Peptidase M64 | ||
| BVU_RS09875 | BVU_1948 | 2527299 | 2527775 | 158 | BVU_RS09875 | Lrp/AsnC ligand binding domain-containing protein | |||
| BVU_RS09880 | BVU_1949 | 2527779 | 2528273 | 164 | c | BVU_RS09880 | dihydrofolate reductase | ||
| BVU_RS09885 | BVU_1950 | 2528357 | 2529151 | 264 | c | BVU_RS09885 | 2.1.1.45 | thymidylate synthase | |
| BVU_RS09890 | BVU_1951 | 2529233 | 2529562 | 109 | c | BVU_RS09890 | DUF5056 domain-containing protein | ||
| BVU_RS09895 | BVU_1952 | 2529546 | 2530094 | 182 | c | BVU_RS09895 | sigma-70 family RNA polymerase sigma factor | ||
| BVU_RS09900 | BVU_1953 | 2530097 | 2530804 | 235 | c | BVU_RS09900 | DUF6249 domain-containing protein |
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| Average [peptide count] | |||||||||
| Accession No. | Locustag old | Locustag | Genome predicted funtion | 1/2ODmax | ODmax | ODstat | |||
| ABR37733.1 | BVU_0003 | BVU_RS00015 | putative ribonucleoside reductase [Phocaeicola vulgatus ATCC 8482] | 8 | 5.75 | 2 | |||
| ABR37734.1 | BVU_0004 | BVU_RS00020 | putative exported protein [Phocaeicola vulgatus ATCC 8482] | 2 | 0 | 0 | |||
| ABR37741.1 | BVU_0011 | BVU_RS00060 | putative 50S ribosomal protein L9 [Phocaeicola vulgatus ATCC 8482] | 14 | 13.75 | 13 | |||
| ABR37742.1 | BVU_0012 | BVU_RS00065 | 30S ribosomal protein S18 [Phocaeicola vulgatus ATCC 8482] | 71 | 56.25 | 69 | |||
| ABR37743.1 | BVU_0013 | BVU_RS00070 | 30S ribosomal protein S6 [Phocaeicola vulgatus ATCC 8482] | 10.5 | 16.25 | 16.75 | |||
| ABR37745.1 | BVU_0015 | BVU_RS00085 | two-component system response regulator [Phocaeicola vulgatus ATCC 8482] | 24.75 | 59.75 | 69.75 | |||
| ABR37746.1 | BVU_0016 | BVU_RS00090 | two-component system sensor histidine kinase [Phocaeicola vulgatus ATCC 8482] | 5.25 | 1.25 | 2.25 | |||
| ABR37747.1 | BVU_0017 | BVU_RS00095 | putative elongation factor G [Phocaeicola vulgatus ATCC 8482] | 0 | 36 | 17.75 | |||
| ABR37776.1 | BVU_0046 | BVU_RS00240 | phosphoglucomutase/phosphomannomutase [Phocaeicola vulgatus ATCC 8482] | 1.75 | 5.5 | 5.25 | |||
| ABR37803.1 | BVU_0073 | BVU_RS00375 | DnaJ domain protein [Phocaeicola vulgatus ATCC 8482] | 0 | 1 | 1 | |||
| ABR37808.1 | BVU_0078 | BVU_RS00400 | putative phosphoribosylformylglycinamidine synthase [Phocaeicola vulgatus ATCC 8482] | 16.5 | 9.75 | 1 | |||
| ABR37812.1 | BVU_0082 | BVU_RS00420 | putative secreted protein [Phocaeicola vulgatus ATCC 8482] | 2.75 | 1.25 | 0 | |||
| ABR37814.1 | BVU_0084 | BVU_RS00430 | putative endonuclease/exonuclease/phosphatase family protein [Phocaeicola vulgatus ATCC 8482] | 0.75 | 0 | 3 | |||
| ABR37815.1 | BVU_0085 | BVU_RS00435 | glycoside hydrolase family 20, candidate beta-N-acetylhexosaminidase [Phocaeicola vulgatus ATCC 8482] | 4.75 | 6.5 | 8.5 | |||
| ABR37816.1 | BVU_0086 | BVU_RS00440 | conserved hypothetical protein [Phocaeicola vulgatus ATCC 8482] | 14.75 | 18 | 9.75 | |||
| ABR37822.1 | BVU_0092 | BVU_RS00475 | putative phosphoribosylformylglycinamidine cyclo-ligase [Phocaeicola vulgatus ATCC 8482] | 0.75 | 1.75 | 0.5 | |||
| ABR37825.1 | BVU_0095 | BVU_RS00485 | orotidine 5'-phosphate decarboxylase [Phocaeicola vulgatus ATCC 8482] | 0 | 0 | 1.5 | |||
| ABR37827.1 | BVU_0097 | BVU_RS00495 | UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [Phocaeicola vulgatus ATCC 8482] | 1 | 2.25 | 0.75 | |||
| ABR37828.1 | BVU_0098 | BVU_RS00500 | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [Phocaeicola vulgatus ATCC 8482] | 32.75 | 15.25 | 8.25 | |||
| ABR37829.1 | BVU_0099 | BVU_RS00505 | acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase [Phocaeicola vulgatus ATCC 8482] | 0 | 1.75 | 3.5 | |||
| ABR37853.1 | BVU_0123 | BVU_RS00625 | conserved hypothetical protein [Phocaeicola vulgatus ATCC 8482] | 0 | 3.25 | 4.75 | |||
| ABR37871.1 | BVU_0143 | BVU_RS00725 | GTP cyclohydrolase II [Phocaeicola vulgatus ATCC 8482] | 3.25 | 3 | 3.5 | |||
| ABR37872.1 | BVU_0144 | BVU_RS00730 | aspartate aminotransferase [Phocaeicola vulgatus ATCC 8482] | 20.5 | 20.5 | 20.25 | |||
| ABR37874.1 | BVU_0146 | BVU_RS00745 | 5'-nucleotidase precursor [Phocaeicola vulgatus ATCC 8482] | 1 | 0.5 | 0 | |||
| ABR37875.1 | BVU_0147 | BVU_RS00750 | putative 5'-nucleotidase/2',3'-cyclic phosphodiesterase [Phocaeicola vulgatus ATCC 8482] | 3 | 2 | 1.5 | |||
| ABR37876.1 | BVU_0148 | BVU_RS00755 | 50S ribosomal protein L19 [Phocaeicola vulgatus ATCC 8482] | 16.5 | 24 | 29 | |||
| ABR37885.1 | BVU_0157 | BVU_RS00815 | conserved protein, with a weak D-galactarate dehydratase/altronate hydrolase domain [Phocaeicola vulgatus ATCC 8482] | 0 | 1 | 0 | |||
| ABR37897.1 | BVU_0169 | BVU_RS00870 | putative outer membrane protein, probably involved in nutrient binding [Phocaeicola vulgatus ATCC 8482] | 7 | 0 | 6.25 | |||
| ABR37919.1 | BVU_0191 | BVU_RS00975 | ROK family transcriptional repressor, with glucokinase domain [Phocaeicola vulgatus ATCC 8482] | 8.25 | 12.5 | 15.75 | |||
| ABR37923.1 | BVU_0195 | BVU_RS00995 | membrane fusion efflux protein [Phocaeicola vulgatus ATCC 8482] | 14.5 | 10 | 12.25 | |||
| ABR37924.1 | BVU_0196 | BVU_RS01000 | putative outer membrane efflux protein [Phocaeicola vulgatus ATCC 8482] | 1.75 | 2.5 | 2 | |||
| ABR37926.1 | BVU_0198 | BVU_RS01010 | conserved hypothetical protein [Phocaeicola vulgatus ATCC 8482] | 0 | 1.75 | 4.25 | |||
| ABR37928.1 | BVU_0200 | BVU_RS01020 | putative alcohol dehydrogenase [Phocaeicola vulgatus ATCC 8482] | 0 | 0 | 1 | |||
| ABR37929.1 | BVU_0201 | BVU_RS01025 | conserved hypothetical protein [Phocaeicola vulgatus ATCC 8482] | 0 | 4.5 | 4.5 | |||
| ABR37933.1 | BVU_0205 | BVU_RS01045 | aspartate-semialdehyde dehydrogenase [Phocaeicola vulgatus ATCC 8482] | 22.25 | 32.75 | 31.25 | |||
| ABR37934.1 | BVU_0206 | BVU_RS01050 | putative FKBP-type peptidyl-prolyl cis-trans isomerase FkpA [Phocaeicola vulgatus ATCC 8482] | 8.25 | 5 | 5.5 | |||
| ABR37935.1 | BVU_0207 | BVU_RS01055 | glycyl-tRNA synthetase [Phocaeicola vulgatus ATCC 8482] | 4 | 5.75 | 2 | |||
| ABR37960.1 | BVU_0238 | BVU_RS01205 | putative membrane fusion protein transporter [Phocaeicola vulgatus ATCC 8482] | 10.75 | 7.25 | 6.75 | |||
| ABR37963.1 | BVU_0241 | BVU_RS01220 | acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase [Phocaeicola vulgatus ATCC 8482] | 2 | 2.75 | 1.5 | |||
| ABR37964.1 | BVU_0242 | BVU_RS01225 | outer membrane protein oprM precursor [Phocaeicola vulgatus ATCC 8482] | 35.25 | 11.5 | 8 | |||
| ABR37965.1 | BVU_0243 | BVU_RS01230 | AcrB/AcrD family multidrug resistance protein [Phocaeicola vulgatus ATCC 8482] | 7 | 1 | 1.75 | |||
| ABR37966.1 | BVU_0244 | BVU_RS01235 | AcrA/AcrE family multidrug resistance protein [Phocaeicola vulgatus ATCC 8482] | 50 | 24 | 20 | |||
| ABR37967.1 | BVU_0245 | BVU_RS01240 | NADP-dependent malate dehydrogenase [Phocaeicola vulgatus ATCC 8482] | 17.5 | 23.25 | 11.75 | |||
| ABR37968.1 | BVU_0246 | BVU_RS01250 | NADP-specific glutamate dehydrogenase [Phocaeicola vulgatus ATCC 8482] | 76.5 | 66.25 | 43 | |||
| ABR37969.1 | BVU_0247 | BVU_RS01255 | conserved hypothetical protein [Phocaeicola vulgatus ATCC 8482] | 23.25 | 16.5 | 9.75 | |||
| ABR37970.1 | BVU_0248 | BVU_RS01260 | conserved hypothetical protein [Phocaeicola vulgatus ATCC 8482] | 23.25 | 13 | 15.25 | |||
| ABR37971.1 | BVU_0249 | BVU_RS01265 | hypothetical protein BVU_0249 [Phocaeicola vulgatus ATCC 8482] | 58.5 | 38.25 | 62.75 | |||
| ABR37973.1 | BVU_0251 | BVU_RS01275 | NAD-specific glutamate dehydrogenase 1 [Phocaeicola vulgatus ATCC 8482] | 0 | 10.25 | 11.75 | |||
| ABR37974.1 | BVU_0252 | BVU_RS01280 | conserved hypothetical protein [Phocaeicola vulgatus ATCC 8482] | 1 | 1 | 0 | |||
| ABR37978.1 | BVU_0256 | BVU_RS01300 | malate dehydrogenase [Phocaeicola vulgatus ATCC 8482] | 56.5 | 72 | 86 | |||
| ABR37979.1 | BVU_0257 | BVU_RS01305 | conserved hypothetical protein [Phocaeicola vulgatus ATCC 8482] | 22 | 10.75 | 15.25 | |||
| ABR37983.1 | BVU_0263 | BVU_RS01330 | lipoprotein [Phocaeicola vulgatus ATCC 8482] | 64 | 61.5 | 65.25 | |||
| ABR37986.1 | BVU_0266 | BVU_RS01345 | Mrp/Nbp35 family ATP-binding protein [Phocaeicola vulgatus ATCC 8482] | 3.75 | 4.75 | 7.75 | |||
| ABR37988.1 | BVU_0268 | BVU_RS01355 | conserved hypothetical protein [Phocaeicola vulgatus ATCC 8482] | 8.75 | 2.25 | 6 | |||
| ABR37989.1 | BVU_0269 | BVU_RS01360 | branched-chain amino acid aminotransferase [Phocaeicola vulgatus ATCC 8482] | 6.75 | 23.75 | 17.5 | |||
| ABR38002.1 | BVU_0282 | BVU_RS01425 | conserved hypothetical protein [Phocaeicola vulgatus ATCC 8482] | 1 | 1.25 | 1.75 | |||
| ABR38018.1 | BVU_0298 | BVU_RS01520 | dTDP-glucose 4,6-dehydratase [Phocaeicola vulgatus ATCC 8482] | 2 | 6.5 | 6.5 | |||
| ABR38029.1 | BVU_0309 | BVU_RS01575 | putative methylmalonyl-CoA mutase small subunit [Phocaeicola vulgatus ATCC 8482] | 11.5 | 7.75 | 5 | |||
| ABR38030.1 | BVU_0310 | BVU_RS01580 | methylmalonyl-CoA mutase large subunit [Phocaeicola vulgatus ATCC 8482] | 16.25 | 19 | 6.5 | |||
| ABR38035.1 | BVU_0315 | BVU_RS01605 | putative two-component system sensor histidine kinase [Phocaeicola vulgatus ATCC 8482] | 1.5 | 1.75 | 1 | |||
| ABR38036.1 | BVU_0316 | BVU_RS01610 | putative membrane transport protein [Phocaeicola vulgatus ATCC 8482] | 2.5 | 0 | 0.75 | |||
| ABR38037.1 | BVU_0317 | BVU_RS01615 | putative cation efflux pump [Phocaeicola vulgatus ATCC 8482] | 0 | 0.75 | 0 | |||
| ABR38038.1 | BVU_0318 | BVU_RS01620 | putative cation efflux pump [Phocaeicola vulgatus ATCC 8482] | 1.5 | 5.25 | 3.5 | |||
| ABR38039.1 | BVU_0319 | BVU_RS01625 | outer membrane efflux protein oprM precursor [Phocaeicola vulgatus ATCC 8482] | 2 | 3.25 | 8.5 | |||
| ABR38040.1 | BVU_0320 | BVU_RS01630 | hypothetical protein BVU_0320 [Phocaeicola vulgatus ATCC 8482] | 0 | 2.75 | 3.25 | |||
| ABR38045.1 | BVU_0325 | BVU_RS01655 | electron transfer flavoprotein beta-subunit [Phocaeicola vulgatus ATCC 8482] | 7 | 15.75 | 14.5 | |||
| ABR38046.1 | BVU_0326 | BVU_RS01660 | electron transfer flavoprotein alpha-subunit [Phocaeicola vulgatus ATCC 8482] | 1.25 | 1.75 | 0 | |||
| ABR38048.1 | BVU_0328 | BVU_RS01670 | acyl-CoA dehydrogenase [Phocaeicola vulgatus ATCC 8482] | 8.25 | 7 | 3.5 | |||
| ABR38049.1 | BVU_0329 | BVU_RS01675 | putative histidine decarboxylase [Phocaeicola vulgatus ATCC 8482] | 0 | 4.75 | 6 | |||
| ABR38050.1 | BVU_0330 | BVU_RS01680 | putative phenylacetic acid degradation protein [Phocaeicola vulgatus ATCC 8482] | 0 | 0 | 0.75 | |||
| ABR38051.1 | BVU_0331 | BVU_RS01685 | putative DNA mismatch repair protein [Phocaeicola vulgatus ATCC 8482] | 0 | 1 | 1.25 | |||
| ABR38060.1 | BVU_0340 | BVU_RS01735 | putative oxidoreductase [Phocaeicola vulgatus ATCC 8482] | 8.5 | 8.25 | 6 | |||
| ABR38064.1 | BVU_0345 | BVU_RS01760 | 60 kDa chaperonin [Phocaeicola vulgatus ATCC 8482] | 46.25 | 82.75 | 73 | |||
| ABR38065.1 | BVU_0346 | BVU_RS01765 | 10 kDa chaperonin [Phocaeicola vulgatus ATCC 8482] | 21.75 | 31.5 | 36.75 | |||
| ABR38070.1 | BVU_0351 | BVU_RS01790 | histidyl-tRNA synthetase [Phocaeicola vulgatus ATCC 8482] | 5.75 | 7 | 7 | |||
| ABR38080.1 | BVU_0361 | BVU_RS01845 | 3,4-dihydroxy-2-butanone 4-phosphate synthase [Phocaeicola vulgatus ATCC 8482] | 3.5 | 2.5 | 2.25 | |||
| ABR38092.1 | BVU_0373 | BVU_RS01905 | conserved hypothetical protein [Phocaeicola vulgatus ATCC 8482] | 9 | 14 | 15.75 | |||
| ABR38093.1 | BVU_0374 | BVU_RS01910 | conserved hypothetical protein [Phocaeicola vulgatus ATCC 8482] | 3.25 | 2 | 4 | |||
| ABR38094.1 | BVU_0375 | BVU_RS01915 | conserved hypothetical protein [Phocaeicola vulgatus ATCC 8482] | 2.25 | 1.25 | 2 | |||
| ABR38096.1 | BVU_0377 | BVU_RS01920 | peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Phocaeicola vulgatus ATCC 8482] | 0 | 2 | 0 | |||
| ABR38099.1 | BVU_0380 | BVU_RS01935 | two-component system sensor histidine kinase, with response regulator receiver domain [Phocaeicola vulgatus ATCC 8482] | 2.75 | 0 | 0 | |||
| ABR38103.1 | BVU_0384 | BVU_RS01955 | 3-oxoacyl-[acyl-carrier protein] reductase [Phocaeicola vulgatus ATCC 8482] | 20 | 23.75 | 27.75 | |||
| ABR38113.1 | BVU_0395 | BVU_RS02010 | hypothetical protein BVU_0395 [Phocaeicola vulgatus ATCC 8482] | 10 | 4.5 | 5.5 | |||
| ABR38120.1 | BVU_0402 | BVU_RS02055 | putative cysteine synthase [Phocaeicola vulgatus ATCC 8482] | 0 | 1.5 | 2.75 | |||
| ABR38123.1 | BVU_0408 | BVU_RS02085 | tryptophanyl-tRNA synthetase [Phocaeicola vulgatus ATCC 8482] | 3.25 | 2.25 | 0 | |||
| ABR38124.1 | BVU_0409 | BVU_RS02090 | hypothetical protein BVU_0409 [Phocaeicola vulgatus ATCC 8482] | 19 | 7.5 | 8.5 | |||
| ABR38125.1 | BVU_0410 | BVU_RS02095 | glutamine-dependent carbamyl phosphate synthetase [Phocaeicola vulgatus ATCC 8482] | 83.75 | 29 | 4.75 | |||
| ABR38127.1 | BVU_0412 | BVU_RS02105 | putative protein disulfide isomerase [Phocaeicola vulgatus ATCC 8482] | 0 | 0 | 0.75 | |||
| ABR38129.1 | BVU_0414 | BVU_RS02115 | major outer membrane protein OmpA [Phocaeicola vulgatus ATCC 8482] | 417.25 | 912.25 | 1338.25 | |||
| ABR38135.1 | BVU_0420 | BVU_RS02145 | CysQ, sulfite synthesis pathway protein [Phocaeicola vulgatus ATCC 8482] | 0 | 0.75 | 0 | |||
| ABR38136.1 | BVU_0421 | BVU_RS02150 | conserved hypothetical exported protein [Phocaeicola vulgatus ATCC 8482] | 2.5 | 1.5 | 1.25 | |||
| ABR38137.1 | BVU_0422 | BVU_RS02155 | DNA mismatch repair protein mutL [Phocaeicola vulgatus ATCC 8482] | 0 | 3 | 4.5 | |||
| ABR38138.1 | BVU_0423 | BVU_RS02160 | conserved hypothetical protein [Phocaeicola vulgatus ATCC 8482] | 0 | 0 | 3 | |||
| ABR38140.1 | BVU_0425 | BVU_RS02170 | peptidyl-prolyl cis-trans isomerase [Phocaeicola vulgatus ATCC 8482] | 7.75 | 9 | 6.75 | |||
| ABR38141.1 | BVU_0426 | BVU_RS02175 | conserved hypothetical protein [Phocaeicola vulgatus ATCC 8482] | 5 | 0.75 | 0 | |||
| ABR38143.1 | BVU_0428 | BVU_RS02185 | inosine-5'-monophosphate dehydrogenase [Phocaeicola vulgatus ATCC 8482] | 25 | 28.75 | 28.75 | |||
| ABR38157.1 | BVU_0442 | BVU_RS02265 | ATP-dependent DNA helicase recQ [Phocaeicola vulgatus ATCC 8482] | 9 | 12 | 4.25 | |||
| ABR38158.1 | BVU_0443 | BVU_RS02270 | ATP-dependent Clp protease ATP-binding subunit [Phocaeicola vulgatus ATCC 8482] | 3.5 | 4.5 | 3.5 |
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| Name | Locus tag | Function/EC No. | 1/2ODmax | ODmax | ODstat | ||||
| glycine biosynthesis I | |||||||||
| GlyA | BVU_RS16795 | serine hydroxymethyltransferase | 7 | 18 | 18 | ||||
| glycine biosynthesis II | |||||||||
| GcvP | BVU_RS15125 | glycine dehydrogenase | 0 | 2 | 0 | ||||
| L-alanine biosynthesis I | |||||||||
| - | BVU_RS06885 | cysteine desulfurase | 0 | 0 | 1 | ||||
| L-arginine biosynthesis (via L-ornithine) | |||||||||
| ArgB | - | - | - | - | - | ||||
| ArgB | BVU_RS06775 | putative acetylglutamate kinase | 0 | 0 | 1 | ||||
| - | BVU_RS03000 | N-acetyl-gamma-glutamyl-phosphate reductase | 3 | 2 | 2 | ||||
| - | BVU_RS02995 | acetylornithine aminotransferase | 3 | 4 | 5 | ||||
| - | BVU_RS07505 | - | - | - | - | ||||
| - | BVU_RS20030 | carbamyl phosphate synthetase | 28 | 13 | 3 | ||||
| - | BVU_RS20035 | glutamine-hydrolyzing carbamoyl phosphate synthetase III | 2 | 5 | 4 | ||||
| - | BVU_RS20255 | - | - | - | - | ||||
| - | BVU_RS02095 | glutamine-dependent carbamyl phosphate synthetase | 84 | 29 | 5 | ||||
| - | BVU_RS02805 | ornithine carbamoyltransferase | 3 | 3 | 4 | ||||
| - | BVU_RS03005 | argininosuccinate synthase | 6 | 9 | 7 | ||||
| ArgH | - | - | - | - | - | ||||
| L-asparagine biosynthesis I | |||||||||
| AsnB | - | asparagine synthase B | - | - | - | ||||
| L-asparagine biosynthesis II | |||||||||
| - | BVU_RS20790 | asparagine synthase A | 6 | 6 | 0 | ||||
| L-aspartate biosynthesis | |||||||||
| - | BVU_RS11395 | aspartate 4-decarboxylase | 0 | 0 | 1 | ||||
| L-cystein biosynthesis I | |||||||||
| - | BVU_RS05520 | serine acetyltransferase | 0 | 0 | 1 | ||||
| CysK | BVU_RS02055 | cysteine synthase A | 0 | 2 | 3 | ||||
| L-cystein biosynthesis IV | |||||||||
| - | BVU_RS05985 | S-adenosylmethionine synthase | 3 | 3 | 3 | ||||
| - | BVU_RS07105 | 2.1.1.- / S-adenosyl-methyltransferase | 0 | 0 | 2 | ||||
| - | BVU_RS04530 | S-adenosylhomocysteine nucleosidase | 1 | 2 | 1 | ||||
| - | BVU_RS04535 | S-ribosylhomocysteine lyase | 0 | 0 | 2 | ||||
| - | - | 4.2.1.22 | - | - | - | ||||
| - | BVU_RS10335 | 2.5.1.48 / homoserine O-succinyltransferase | 0 | 0 | 1 | ||||
| L-glutamate biosynthesis II | |||||||||
| - | BVU_RS01250 | glutamate dehydrogenase | 77 | 66 | 43 | ||||
| - | BVU_RS01255 | glutamate dehydrogenase | 23 | 17 | 10 | ||||
| L-glutamate biosynthesis III | |||||||||
| BVU_RS01275 | glutamate dehydrogenase | 0 | 10 | 12 | |||||
| - | BVU_RS01250 | glutamate dehydrogenase | 77 | 66 | 43 | ||||
| L-glutamine biosynthesis I | |||||||||
| - | BVU_RS17720 | glutamine synthetase | 0 | 1 | 0 | ||||
| - | BVU_RS17970 | glutamine synthetase | 10 | 13 | 8 | ||||
| - | BVU_RS20050 | glutamine synthetase | - | - | - | ||||
| L-histidine biosynthesis | |||||||||
| - | BVU_RS11880 | ATP phosphoribosyltransferase | 0 | 1 | 0 | ||||
| - | BVU_RS19330 | - | - | - | - | ||||
| HisA | BVU_RS19320 | 5.3.1.16 | 4 | 3 | 4 | ||||
| HisH | BVU_RS20510 | 4.3.2.- | 1 | 0 | 0 | ||||
| HisB | BVU_RS11895 | histidinol-phosphate aminotransferase | - | - | - | ||||
| HisC | BVU_RS11890 | 2.6.1.9 | - | - | - | ||||
| - | BVU_RS17605 | - | - | - | |||||
| HisD | BVU_RS11885 | histidinal dehydrogenase | - | - | - | ||||
| L-homocysteine biosynthesis | |||||||||
| - | BVU_RS10335 | homoserine O-succinyltransferase | 0 | 0 | 1 | ||||
| - | BVU_RS03900 | O-acetylhomoserine (thiol)-lyase | 4 | 2 | 1 | ||||
| - | BVU_RS13630 | O-acetylhomoserine (thiol)-lyase | 7 | 4 | 7 | ||||
| L-homoserine biosynthesis | |||||||||
| - | BVU_RS10375 | putative aspartokinase I-homoserine dehydrogenase | 26 | 21 | 9 | ||||
| - | BVU_RS19340 | aspartokinase | 13 | 11 | 8 | ||||
| - | BVU_RS01045 | aspartate-semialdehyde dehydrogenase | 22 | 33 | 31 | ||||
| L-isoleucine biosynthesis I | |||||||||
| - | BVU_RS19515 | threonine ammonia-lyase | - | - | - | ||||
| IlvB | BVU_RS12865 | acetolactate synthase large subunit | 2 | 0 | 0 | ||||
| IlvN | BVU_RS12870 | acetohydroxyacid synthase small subunit | 9 | 13 | 14 | ||||
| IlvC | BVU_RS12880 | ketol-acid reductoisomerase | 22 | 24 | 26 | ||||
| - | BVU_RS12860 | dihydroxy-acid dehydratase | 6 | 6 | 5 | ||||
| - | BVU_RS01360 | branched-chain amino acid aminotransferase | 7 | 24 | 18 | ||||
| L-isoleucine biosynthesis IV | |||||||||
| - | BVU_RS02915 | propanoate:CoA ligase (AMP-forming) | - | - | - | ||||
| - | BVU_RS00045 | Long-chain-fatty-acid--CoA ligase | - | - | - | ||||
| - | BVU_RS19410 | Long-chain-fatty-acid--CoA ligase | - | - | - | ||||
| - | BVU_RS15255 | Long-chain-fatty-acid--CoA ligase | - | - | - | ||||
| - | BVU_RS07510 | Long-chain-fatty-acid--CoA ligase | - | - | - | ||||
| - | BVU_RS04995 | Long-chain-fatty-acid--CoA ligase | - | - | - | ||||
| - | BVU_RS04960 | Long-chain-fatty-acid--CoA ligase | - | - | - | ||||
| IlvB | BVU_RS12865 | acetolactate synthase large subunit | 2 | 0 | 0 | ||||
| IlvN | BVU_RS12870 | acetohydroxyacid synthase small subunit | 9 | 13 | 14 | ||||
| IlvC | BVU_RS12880 | ketol-acid reductoisomerase | 22 | 24 | 26 | ||||
| - | BVU_RS12860 | dihydroxy-acid dehydratase | 6 | 6 | 5 | ||||
| - | BVU_RS01360 | branched-chain amino acid aminotransferase | 7 | 24 | 18 | ||||
| L-leucine biosynthesis | |||||||||
| - | BVU_RS10160 | 2-isopropylmalate synthase | 9 | 11 | 8 | ||||
| - | BVU_RS10175 | 2-isopropylmalate synthase | 0 | 1 | 0 | ||||
| LeuC | BVU_RS10165 | 3-isopropylmalate dehydratase large subunit | 7 | 10 | 6 | ||||
| LeuD | BVU_RS10170 | 3-isopropylmalate dehydratase small subunit | 1 | 0 | 0 | ||||
| LeuB | BVU_RS10180 | 3-isopropylmalate dehydrogenase | 3 | 3 | 2 | ||||
| - | BVU_RS01360 | branched-chain amino acid aminotransferase | 7 | 24 | 18 | ||||
| L-lysine biosynthesis III | |||||||||
| - | BVU_RS10375 | putative aspartokinase I-homoserine dehydrogenase | 26 | 21 | 6 | ||||
| - | BVU_RS19340 | aspartokinase | 13 | 11 | 8 | ||||
| - | BVU_RS01045 | aspartate-semialdehyde dehydrogenase | 22 | 33 | 31 | ||||
| - | BVU_RS16620 | putative dihydrodipicolinate synthase | 1 | 4 | 3 | ||||
| DapB | - | - | - | - | - | ||||
| - | BVU_RS08435 | putative oxidoreductase | 22 | 40 | 68 | ||||
| LysA | BVU_RS19345 | diaminopimelate decarboxylase | 2 | 3 | 1 | ||||
| - | BVU_RS20260 | - | - | - | - | ||||
| L-lysine biosynthesis VI |
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| Name | Locus tag | function/EC No. | 1/2ODmax | ODmax | ODstat | ||||
| 5-aminoimidazole ribonucleotide biosynthesis II | |||||||||
| - | BVU_RS04370 | - | - | - | - | ||||
| - | BVU_RS19210 | - | - | - | - | ||||
| - | BVU_RS20040 | - | - | - | - | ||||
| - | BVU_RS05540 | phosphoribosylamine--glycine ligase | 3 | 3 | 3 | ||||
| - | BVU_RS13930 | phosphoribosylglycinamide formyltransferase 2 | 1 | 6 | 5 | ||||
| - | BVU_RS00400 | putative phosphoribosylformylglycinamidine synthase | 17 | 10 | 1 | ||||
| - | BVU_RS00475 | putative phosphoribosylformylglycinamidine cyclo-ligase | 1 | 2 | 1 | ||||
| adenine and adenosine salvage I | |||||||||
| - | BVU_RS08145 | purine nucleoside phosphorylase I | 0 | 4 | 7 | ||||
| - | BVU_RS06135 | adenine phosphoribosyltransferase | 1 | 1 | 2 | ||||
| adenine and adenosine salvage IV | |||||||||
| - | BVU_RS04245 | - | - | - | - | ||||
| adenosine deoxyriboculeotide de novo synthesis | |||||||||
| - | BVU_RS15615 | ribonucleoside-diphosphate reductase subunit B | 0 | 0 | 1 | ||||
| - | BVU_RS15620 | - | - | - | - | ||||
| - | BVU_RS02410 | nucleoside diphosphate kinase | 0 | 0 | 4 | ||||
| CMP phosphorylation | |||||||||
| - | BVU_RS09815 | - | - | - | - | ||||
| - | BVU_RS02410 | nucleoside diphosphate kinase | 0 | 0 | 4 | ||||
| guanine and guanosin salvage | |||||||||
| - | BVU_RS08145 | purine nucleoside phosphorylase I | 0 | 4 | 7 | ||||
| Hpt | BVU_RS08545 | putative hypoxanthine guanine phosphoribosyltransferase | 0 | 3 | 5 | ||||
| Xpt | BVU_RS12750 | xanthine phosphoribosyltransferase | 1 | 0 | 0 | ||||
| guanosine deoxyriboculeotide de novo synthesis | |||||||||
| - | BVU_RS15615 | ribonucleoside-diphosphate reductase subunit B | 0 | 0 | 1 | ||||
| - | BVU_RS15620 | - | - | - | - | ||||
| - | BVU_RS02410 | nucleoside diphosphate kinase | 0 | 0 | 4 | ||||
| pyrimidine deoxyribonucleosides salvage | |||||||||
| - | BVU_RS09765 | cytidine/deoxycytidylate deaminase | 0 | 2 | 3 | ||||
| - | BVU_RS09305 | - | - | - | - | ||||
| - | BVU_RS09885 | putative thymidylate synthase B | 1 | 0 | 1 | ||||
| - | BVU_RS09305 | - | - | - | - | ||||
| - | - | 2.7.1.74 | - | - | - | ||||
| pyrimidine deoxyribonucleostide phosphorylation | |||||||||
| - | BVU_RS09815 | - | - | - | - | ||||
| - | BVU_RS02410 | nucleoside diphosphate kinase | 0 | 0 | 4 | ||||
| - | - | 2.7.4.9/12/13; | - | - | - | ||||
| - | BVU_RS02410 | nucleoside diphosphate kinase | 0 | 0 | 4 | ||||
| pyrimidine deoxyriboculeotide de novo synthesis | |||||||||
| - | - | 3.6.1.15; | - | - | - | ||||
| BVU_RS00015 | putative ribonucleoside reductase | 8 | 5.75 | 2 | |||||
| - | BVU_RS15615 | ribonucleoside-diphosphate reductase subunit B | 0 | 0 | 1 | ||||
| - | BVU_RS15620 | - | - | - | - | ||||
| - | BVU_RS02410 | nucleoside diphosphate kinase | 0 | 0 | 4 | ||||
| - | BVU_RS15615 | ribonucleoside-diphosphate reductase subunit B | 0 | 0 | 1 | ||||
| - | BVU_RS15620 | - | - | - | - | ||||
| - | BVU_RS02410 | nucleoside diphosphate kinase | 0 | 0 | 4 | ||||
| - | BVU_RS07130 | deoxyuridine 5'-triphosphate nucleotidohydrolase | 1 | 0 | 1 | ||||
| - | BVU_RS01730 | - | - | - | - | ||||
| - | BVU_RS12965 | - | - | - | - | ||||
| - | BVU_RS09885 | putative thymidylate synthase B | 1 | 0 | 1 | ||||
| - | - | 2.7.4.9/12/13; | - | - | - | ||||
| - | BVU_RS02410 | nucleoside diphosphate kinase | 0 | 0 | 4 | ||||
| pyrimidine nucleobases salvage I | |||||||||
| - | BVU_RS04955 | - | - | - | - | ||||
| - | BVU_RS04990 | - | - | - | - | ||||
| pyrimidine ribonucleosides salvage I | |||||||||
| BVU_RS16775 | cytidine/deoxycytidylate deaminase | 0 | 2 | 3 | |||||
| - | BVU_RS11865 | uridine kinase | 0 | 0 | 1 | ||||
| - | - | 2.7.1.213; | - | - | - | ||||
| UMP biosynthesis II | |||||||||
| - | BVU_RS20030 | carbamoyl phosphate synthetase | 28.25 | 13.25 | 3.25 | ||||
| - | BVU_RS20035 | glutamine-hydrolyzing carbamoyl phosphate synthetase III | 2.25 | 5.25 | 4.25 | ||||
| - | BVU_RS20255 | - | - | - | - | ||||
| - | BVU_RS02095 | glutamine-dependent carbamyl phosphate synthetase | 84 | 29 | 5 | ||||
| PyrB | - | aspartate carbamoyltransferase catalytic chain | 0 | 2 | 0 | ||||
| - | BVU_RS16780 | aspartate carbamoyltransferase regulatory chain | 1 | 2 | 3 | ||||
| - | BVU_RS11365 | dihydroorotase | 0 | 0 | 1 | ||||
| - | BVU_RS19405 | putative dihydroorotate dehydrogenase | 0 | 3 | 2 | ||||
| - | BVU_RS04365 | orotate phosphoribosyltransferase | 13 | 36 | 48 | ||||
| PyrF | BVU_RS00485 | orotidine 5'-phosphate decarboxylase | 0 | 0 | 1.5 | ||||
| UMP biosynthesis III | |||||||||
| - | BVU_RS20030 | carbamyl phosphate synthetase | 28.25 | 13.25 | 3.25 | ||||
| - | BVU_RS20035 | glutamine-hydrolyzing carbamoyl phosphate synthetase III | 2.25 | 5.25 | 4.25 | ||||
| - | BVU_RS20255 | - | - | - | - | ||||
| - | BVU_RS02095 | glutamine-dependent carbamyl phosphate synthetase | 84 | 29 | 5 | ||||
| PyrB | BVU_RS16775 | aspartate carbamoyltransferase catalytic chain | 0 | 2 | 0 | ||||
| - | BVU_RS16780 | aspartate carbamoyltransferase regulatory chain | 1 | 2 | 3 | ||||
| - | BVU_RS11365 | dihydroorotase | 0 | 0 | 1 | ||||
| - | BVU_RS16640 | - | - | - | - | ||||
| - | BVU_RS04365 | orotate phosphoribosyltransferase | 13 | 36 | 48 | ||||
| PyrF | BVU_RS00485 | orotidine 5'-phosphate decarboxylase | 0 | 0 | 1.5 | ||||
| UTP and CTP de novo biosynthesis | |||||||||
| - | BVU_RS09490 | uridylate kinase | 1 | 1 | 1 | ||||
| - | BVU_RS09815 | - | - | - | - | ||||
| - | BVU_RS02410 | nucleoside diphosphate kinase | 0 | 0 | 4 | ||||
| - | BVU_RS16855 | CTP synthase | 9.5 | 8.25 | 3.25 |
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| Name | Locustag | function/EC No. | 1/2ODmax | ODmax | ODstat | ||||
| fatty acid biosynthesis initiation I | |||||||||
| AccC | - | - | - | - | - | ||||
| FabD | BVU_RS19990 | malonyl CoA-acyl carrier protein transacylase | 5 | 9 | 6 | ||||
| - | BVU_RS02315 | 3-oxoacyl-[acyl-carrier-protein] synthase III | 12 | 6 | 2 | ||||
| fatty acid elongation -- saturation | |||||||||
| - | BVU_RS01955 | 3-oxoacyl-[acyl-carrier protein] reductase | 20 | 24 | 28 | ||||
| FabG | - | - | - | - | |||||
| - | BVU_RS00500 | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase | 33 | 15 | 8 | ||||
| FabG | BVU_RS10065 | enoyl-[acyl-carrier-protein] reductase | 10 | 15 | 20 | ||||
| FabG | - | - | - | - | - | ||||
| - | BVU_RS05130 | - | - | - | - | ||||
| palmitate biosynthesis II | |||||||||
| - | BVU_RS01955 | 3-oxoacyl-[acyl-carrier protein] reductase | 20 | 24 | 28 | ||||
| FabG | - | - | - | - | |||||
| - | BVU_RS00500 | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase | 33 | 15 | 8 | ||||
| FabG | - | - | - | - | - | ||||
| - | BVU_RS05130 | - | - | - | - | ||||
| - | BVU_RS12875 | - | - | - | - | ||||
| - | BVU_RS05130 | - | - | - | - | ||||
| - | BVU_RS12875 | - | - | - | - | ||||
| - | BVU_RS00045 | - | - | - | - | ||||
| - | BVU_RS19410 | - | - | - | - | ||||
| - | BVU_RS15255 | - | - | - | - | ||||
| - | BVU_RS07510 | - | - | - | - | ||||
| lipid IVA biosynthesis | |||||||||
| - | BVU_RS00505 | acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase | 0 | 1.75 | 3.5 | ||||
| - | BVU_RS00500 | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase | 33 | 15 | 8 | ||||
| - | BVU_RS00495 | UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase | 1 | 2.25 | 0.75 | ||||
| - | BVU_RS15065 | - | - | - | - | ||||
| - | BVU_RS02680 | - | - | - | - | ||||
| LpxB | BVU_RS09710 | - | - | - | - | ||||
| LpxK | BVU_RS08150 | - | - | - | - | ||||
| palmitoleate biosynthesis I | |||||||||
| - | BVU_RS05130 | - | - | - | - | ||||
| - | BVU_RS01955 | 3-oxoacyl-[acyl-carrier protein] reductase | 20 | 24 | 28 | ||||
| - | BVU_RS00500 | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase | 33 | 15 | 8 | ||||
| FabG | - | - | - | - | |||||
| - | BVU_RS05130 | - | - | - | - | ||||
| - | BVU_RS12875 | - | - | - | - | ||||
| CDP-diacylglycerol biosynthesis I | |||||||||
| - | BVU_RS02595 | - | - | - | - | ||||
| - | - | 2.3.1.15; | - | - | - | ||||
| - | BVU_RS11350 | - | - | - | - | ||||
| - | BVU_RS09720 | - | - | - | - | ||||
| phophatidylethanolamine biosynthesis I | |||||||||
| - | BVU_RS09540 | - | - | - | - | ||||
| - | BVU_RS09545 | phosphatidylserine decarboxylase | 0.75 | 0 | 0 | ||||
| gondoate biosynthesis I (anaerobic) | |||||||||
| - | BVU_RS05130 | - | - | - | - | ||||
| - | BVU_RS01955 | 3-oxoacyl-[acyl-carrier protein] reductase | 20 | 24 | 28 | ||||
| - | BVU_RS00500 | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase | 33 | 15 | 8 | ||||
| FabG | - | - | - | - | |||||
| stearate biosynthesis II | |||||||||
| - | BVU_RS05130 | - | - | - | - | ||||
| - | BVU_RS01955 | 3-oxoacyl-[acyl-carrier protein] reductase | 20 | 24 | 28 | ||||
| - | BVU_RS00500 | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase | 33 | 15 | 8 | ||||
| FabG | - | - | - | - | - | ||||
| - | BVU_RS05130 | - | - | - | - | ||||
| - | BVU_RS12875 | - | - | - | - | ||||
| - | BVU_RS00045 | - | - | - | - | ||||
| - | BVU_RS19410 | - | - | - | - | ||||
| - | BVU_RS15255 | - | - | - | - | ||||
| - | BVU_RS07510 | - | - | - | - | ||||
| peptidoglycan biosynthesis I | |||||||||
| MurA | - | - | - | - | - | ||||
| - | BVU_RS11270 | - | - | - | - | ||||
| - | BVU_RS07065 | - | - | - | - | ||||
| Murl | - | - | - | - | - | ||||
| MurD | - | - | - | - | - | ||||
| - | BVU_RS07090 | - | - | - | - | ||||
| - | BVU_RS02785 | D-alanine--D-alanine ligase | 0 | 0.75 | 0 | ||||
| - | BVU_RS08970 | - | - | - | - | ||||
| - | BVU_RS02365 | - | - | - | - | ||||
| MraY | - | 2.7.8.13; | - | - | - | ||||
| MurG | - | - | - | - | - |
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| Name | average 1/2ODmax | average ODmax | average ODstat | |||||||||||||||||||||
| F23-30 | ||||||||||||||||||||||||
| 3,6-dimethyl-2,5-piperazinedione | 8265378.743 | 1.099494342E7 | 1.384175322E7 | |||||||||||||||||||||
| (4-hydroxyphenyl)acetate | 0 | 1420991.782 | 4245243.065 | |||||||||||||||||||||
| adenosine | 1.914616041E8 | 2.049224602E8 | 4.368890932E7 | |||||||||||||||||||||
| AMP | 0 | 2.542298812E7 | 0 | |||||||||||||||||||||
| alanine | 3.048153434E8 | 1023598628 | 4.595991406E8 | |||||||||||||||||||||
| beta-Alanine | 1.076268625E7 | 1.472702677E7 | 1.153525451E7 | |||||||||||||||||||||
| arabinose | 7.267107188E7 | 5.558992709E7 | 0 | |||||||||||||||||||||
| asparagine | 9194929.216 | 1.065020677E8 | 4.63419194E7 | |||||||||||||||||||||
| aspartate | 1336480732 | 2.561961123E9 | 1979001674 | |||||||||||||||||||||
| N-acetyl-aspartate | 1.430374177E7 | 1.358601966E7 | 1.834177997E7 | |||||||||||||||||||||
| 4-hydroxybutanoate | 4341238.489 | 1.611925834E7 | 3.671945556E7 | |||||||||||||||||||||
| citraconic acid | 3044486.818 | 2.246157863E7 | 3.030884869E7 | |||||||||||||||||||||
| citrate | 2.312309536E7 | 137330468 | 8.736149751E7 | |||||||||||||||||||||
| cytosine | 2.809813669E7 | 8.62736557E7 | 3.474310703E7 | |||||||||||||||||||||
| erythritol | 5054322.738 | 1.778982275E7 | 1.638248006E7 | |||||||||||||||||||||
| erythronic acid | 2.272937928E7 | 3.634991079E7 | 2.688512397E7 | |||||||||||||||||||||
| erythrose | 2.787263181E7 | 5.955155986E7 | 6765894.403 | |||||||||||||||||||||
| ethanolamine | 4.969040726E7 | 1.530971721E8 | 3.033750008E8 | |||||||||||||||||||||
| ethanolaminephosphate | 2.546777747E7 | 2.813185905E7 | 9443448.536 | |||||||||||||||||||||
| fructose | 1.850946281E8 | 1.257242206E8 | 0 | |||||||||||||||||||||
| fructose-6-phosphate | 2.849009979E8 | 1.242458087E8 | 0 | |||||||||||||||||||||
| fumarate | 2.404458386E8 | 5.637002336E8 | 6.521516803E8 | |||||||||||||||||||||
| gluconic-acid | 2.568004851E8 | 1.181679281E8 | 9550974.311 | |||||||||||||||||||||
| N-acetyl-glucosamine | 9768310.857 | 7213146.982 | 0 | |||||||||||||||||||||
| glucose-6-phosphate | 4.067897086E8 | 1.828808347E8 | 0 | |||||||||||||||||||||
| glutamate | 1340216244 | 6.658121568E9 | 1169145644 | |||||||||||||||||||||
| glutamine | 2.056023878E8 | 4.190071894E8 | 2.240359272E8 | |||||||||||||||||||||
| 2-hydroxy-glutarate | 0 | 3.294905939E7 | 3.590857646E7 | |||||||||||||||||||||
| glyceraldehyde | 7750331.635 | 2.298763835E7 | 1.335637885E7 | |||||||||||||||||||||
| glycerate | 3.755884754E8 | 2.740662649E8 | 1.147235845E8 | |||||||||||||||||||||
| 2-phosphoglycerate | 0 | 4572553.126 | 0 | |||||||||||||||||||||
| 3-phosphoglycerate | 2.302342533E7 | 3.439023367E7 | 5846386.359 | |||||||||||||||||||||
| glycerol | 4.661167241E7 | 6.570150232E7 | 6.856078056E7 | |||||||||||||||||||||
| glycerol-3-phosphate | 1.041908498E7 | 1.718752623E8 | 1.772606967E8 | |||||||||||||||||||||
| glycine | 6.209431422E8 | 2057670347 | 4.592510717E8 | |||||||||||||||||||||
| glycolate | 1.405411682E7 | 2.059001147E7 | 1.808473331E7 | |||||||||||||||||||||
| homoserine | 3.335082045E8 | 3.591716395E8 | 1.399917335E7 | |||||||||||||||||||||
| N-2-oxocaproyl-homoserine lactone | 1.517760032E7 | 1.867238667E7 | 2.293308736E7 | |||||||||||||||||||||
| N-2-oxooctanyol-DL-homoserine lactone | 0 | 0 | 11635.331750000001 | |||||||||||||||||||||
| N-hexanoyl-homoserine lactone | 0 | 0 | 3740822.157 | |||||||||||||||||||||
| homoserine-lactone | 1.809613475E7 | 1.95027542E7 | 2.570292888E7 | |||||||||||||||||||||
| indole-3-acetaldehyde | 4383476.133 | 9365954 | 8288216.327 | |||||||||||||||||||||
| indole-3-acetic acid | 0 | 4.691573849E7 | 7820113.983 | |||||||||||||||||||||
| indole-3-lactate | 2186880.9 | 2630974.483 | 2594399.649 | |||||||||||||||||||||
| myoinositol-2-phosphate | 1.775189535E7 | 2.390872067E7 | 5423904.234 | |||||||||||||||||||||
| isoleucine | 1.374542193E8 | 3.199794331E8 | 1.217658453E8 | |||||||||||||||||||||
| lactate | 4.274263196E8 | 8.536903754E8 | 9.656382479E8 | |||||||||||||||||||||
| leucine | 5.790712841E8 | 1439535415 | 5.516541295E8 | |||||||||||||||||||||
| maleamate | 4192487.17 | 5795711.583 | 5199904.97 | |||||||||||||||||||||
| malate | 3.923954001E8 | 848322731 | 8.097098594E8 | |||||||||||||||||||||
| 2-isopropylmalic acid | 0 | 2.890969401E7 | 0 | |||||||||||||||||||||
| 2-methyl-malate | 6.080885221E7 | 1.079938159E8 | 4.788533355E7 | |||||||||||||||||||||
| maltose | 1.326685341E8 | 133750122 | 1800785.279 | |||||||||||||||||||||
| 3,4-dihydroxy-mandelic acid | 8064132.172 | 8749595.731 | 1.079897095E7 | |||||||||||||||||||||
| mannose | 4.487437963E8 | 252336952 | 1.393508464E7 | |||||||||||||||||||||
| mannose-6-phosphate | 9.636200797E7 | 5.955190153E7 | 0 | |||||||||||||||||||||
| methionine | 2034513.532 | 7.628279346E7 | 2.730399671E8 | |||||||||||||||||||||
| Nicotinamide | 1.258987794E8 | 501164642 | 3.260022908E8 | |||||||||||||||||||||
| nicotinic acid | 1.170017169E8 | 2.097302329E8 | 4.873414118E8 | |||||||||||||||||||||
| phenylacetate | 2956646.363 | 4456889.651 | 9633215.127 | |||||||||||||||||||||
| phenylalanine | 4.388546669E8 | 4.935537981E8 | 1.789371058E8 | |||||||||||||||||||||
| phenylpyruvate | 2956401.783 | 3496928.418 | 2585520.354 | |||||||||||||||||||||
| phosphoenolpyruvate | 7904362.188 | 1.402691499E7 | 5128633.264 | |||||||||||||||||||||
| proline | 2.666568981E8 | 1511423646 | 1605577602 | |||||||||||||||||||||
| 2-amino-2-methyl-3-hydroxy-propanoate | 0 | 0 | 3.371460358E7 | |||||||||||||||||||||
| putrescine | 0 | 1.005640698E7 | 1.171328886E7 | |||||||||||||||||||||
| pyroglutamate | 2.540546723E9 | 4.104969694E9 | 3.284833895E9 | |||||||||||||||||||||
| pyrophosphate | 0 | 9.711275107E7 | 0 | |||||||||||||||||||||
| pyruvate | 5.764449038E7 | 1.054069723E8 | 4.67062416E7 | |||||||||||||||||||||
| 3-hydroxypyruvate | 2.813426578E7 | 3.874564615E7 | 4.709903788E7 | |||||||||||||||||||||
| rhamnose | 5467552.28 | 7287586.92 | 0 | |||||||||||||||||||||
| ribitol | 1000000000 | 1000000000 | 1000000000 | |||||||||||||||||||||
| ribose | 694367707 | 5.328332125E8 | 4.384904984E8 | |||||||||||||||||||||
| sedoheptulose-7-phosphate | 5.917838268E7 | 7.411755046E7 | 3993024.476 | |||||||||||||||||||||
| serine | 1276441786 | 3.335129505E9 | 7.695622812E8 | |||||||||||||||||||||
| cycloserine | 5.084750116E7 | 2.600599198E8 | 8.100619203E7 | |||||||||||||||||||||
| N-acetyl-serine | 1.059336746E8 | 1.842237611E8 | 0 | |||||||||||||||||||||
| 3-dehydroshikimate | 2915323.859 | 3497219.62 | 1688258.611 | |||||||||||||||||||||
| spermine | 3541465.43 | 4704480.265 | 3252199.329 | |||||||||||||||||||||
| succinate | 2.657480135E9 | 4.484433305E9 | 5.284361116E9 | |||||||||||||||||||||
| threonine | 1749332247 | 3.39003851E9 | 8.915184433E7 | |||||||||||||||||||||
| threose | 3516783.548 | 4772561.199 | 5178304.532 | |||||||||||||||||||||
| thymine | 589083380 | 6.178797086E8 | 2.814467823E8 | |||||||||||||||||||||
| tryptophan | 2539672.872 | 4857143.382 | 6075927.328 | |||||||||||||||||||||
| tyrosine | 9.550352555E7 | 1.368401247E8 | 7.821043712E7 | |||||||||||||||||||||
| Unknown#1325.8-pin-mhe_007 | 2.746316097E7 | 3.831566682E7 | 3.146717502E7 | |||||||||||||||||||||
| Unknown#1366.59-ppu-cja_010 | 1.028040972E8 | 1.286606871E8 | 3.83307523E7 | |||||||||||||||||||||
| Unknown#1366.9-pin-mhe_011 | 0 | 0 | 5.100790519E7 | |||||||||||||||||||||
| Unknown#1392.1-pin-mhe_012 | 0 | 0 | 8.392893011E7 | |||||||||||||||||||||
| Uracil | 1702329403 | 2117311135 | 1641307740 | |||||||||||||||||||||
| uridine | 1.474320764E7 | 8750848.652 | 0 | |||||||||||||||||||||
| valine | 9.230785067E8 | 2.592221665E9 | 3.434458049E8 | |||||||||||||||||||||
| xylitol | 2.239443265E7 | 0 | 0 | |||||||||||||||||||||
| xylose | 1.166395907E7 | 1.05930369E7 | 3438379.921 | |||||||||||||||||||||
| xylulose | 7.952552253E7 | 7.546167784E7 | 0 | |||||||||||||||||||||
| xylulose-5-phosphate | 855942.3938 | 1592458.039 | 0 |
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| CoA | 1/2ODmax | ODmax | Odstat | |||||||||
| CoenzymeA | 4912868 | 4693358 | 4415376 | 4029986 | 7999299 | 5436994 | 5471682 | 7341028 | 3722929 | 3119229 | 3701465 | 3818397 |
| Acetyl-CoA | 58415094 | 60965398 | 63465947 | 60060491 | 45393976 | 31968886 | 35167580 | 45404304 | 44039022 | 39014335 | 41993660 | 38573573 |
| Propenoyl-CoA | 2135768 | 2095049 | 1494035 | 1733782 | 337249 | 305428 | 301575 | 250793 | 223376 | 182202 | 258149 | 281767 |
| Propanoyl-CoA | 5023647 | 5226892 | 4527377 | 4287440 | 1943418 | 2347079 | 1925851 | 2219608 | 7656282 | 5159891 | 6943862 | 6861228 |
| Butanoyl-CoA | 4776301 | 5393140 | 4026315 | 5894770 | 20097739 | 17224231 | 12407080 | 17225271 | 14975138 | 14403527 | 11433604 | 11987066 |
| Isobutanoyl-CoA | 4371966 | 4922817 | 4109338 | 4505565 | 15840788 | 14356691 | 11994533 | 13954118 | 8893864 | 8921627 | 6932793 | 9596689 |
| (S)-2-Methylbutanoyl-CoA | 9949737 | 10129657 | 8731578 | 8150428 | 15483160 | 15620341 | 18433654 | 20650339 | 44850423 | 36776164 | 32778771 | 48635322 |
| Isovaleryl-CoA | 4999600 | 4500310 | 3911202 | 3374602 | 25918635 | 19124343 | 20376423 | 23534793 | 55823717 | 35807178 | 53743495 | 46561363 |
| Pentanoyl-CoA | 824233 | 868427 | 721083 | 755892 | 1771268 | 1402055 | 1438430 | 1969274 | 5972812 | 6884757 | 6884792 | 7280826 |
| Malonyl-CoA | 177622 | 217814 | 177321 | 233897 | 732199 | 626023 | 648105 | 713322 | 871181 | 1022431 | 866700 | 887095 |
| Methylmalonyl-CoA | 5123649 | 4195843 | 3916541 | 3763798 | 2875768 | 1995122 | 2569047 | 1923211 | 9979938 | 7408454 | 9096165 | 10471671 |
| Succinyl-CoA | 21169812 | 17919356 | 22625778 | 14636368 | 19358027 | 22797158 | 14771345 | 17849154 | 31131938 | 26989307 | 33768034 | 33003571 |
| Cyclohexa-1,5-dienecarbonyl-CoA | 1227884 | 1306538 | 925570 | 1214402 | 2339858 | 2739259 | 2490548 | 2597333 | 7394661 | 5144411 | 8170709 | 7629941 |
| Cyclohex-1-ene-1-carboxyl-CoA | 221606 | 177166 | 155359 | 182230 | 1090067 | 856545 | 745147 | 857469 | 595135 | 746863 | 741959 | 566189 |
| Methylsuccinyl-CoA | 430019 | 486722 | 340381 | 425041 | 396548 | 429238 | 333357 | 396585 | 485835 | 408756 | 350739 | 325660 |
| C28H42N7O18P3S, similar to beta-(2-Furyl)propionyl-CoA | 1739194 | 1817161 | 1652515 | 1545113 | 1034390 | 1076613 | 1304001 | 1434617 | 605293 | 588617 | 823728 | 772815 |
| C29H41N8O17P3S, exact mass based | 1956558 | 1959717 | 1510641 | 1436500 | 11001764 | 9401792 | 8029753 | 10627222 | 9750493 | 8677756 | 9005034 | 11810337 |
| Phenylglyoxylyl-CoA | 81301 | 97570 | 84085 | 88380 | 883414 | 781849 | 817047 | 1053451 | 1346654 | 1350960 | 1368696 | 1943608 |
| C29H43N8O17P3S, similar to N-Methylanthraniloyl-CoA | 3621909 | 4315683 | 2862026 | 3731336 | 3989842 | 4396538 | 3225252 | 3857268 | 1260793 | 990580 | 1201589 | 1246272 |
| 2,3-Dihydro-2,3-dihydroxybenzoyl-CoA | 610018 | 585519 | 641224 | 594254 | 1103750 | 1019841 | 903896 | 818590 | 473518 | 456067 | 498651 | 496308 |
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| Name | average 1/2ODmax | average ODmax | average ODstat | ||||||
| (4-hydroxyphenyl)acetate | 0 | 0 | 9289.599772 | ||||||
| 1,6-anhydro-glucose | 13241.09054 | 21598.00354 | 5276.194721 | ||||||
| 1-O-methyl-alpha-glucopyranoside | 120221.2645 | 22595.36598 | 0 | ||||||
| 1-pyrroline-2-carboxylate | 11399.37926 | 12334.10381 | 12984.44374 | ||||||
| 2,4-dihydroxybutanoate | 23100.79123 | 17651.50354 | 17132.32856 | ||||||
| 2-amino-2-methylpropane-1,3-diol | 17292.52606 | 304397.5939 | 119436.4133 | ||||||
| 2-aminobutanoate | 13801.57337 | 64058.93625 | 18782.03809 | ||||||
| 2-aminoisobutanoate | 1846.437294 | 2522.104867 | 981.3441083 | ||||||
| 2-hydroxy-4-(methylthio)butanoate | 1062.234506 | 4951.057944 | 21931.4075 | ||||||
| 2-hydroxybutanoate | 0 | 21893.13429 | 20704.05855 | ||||||
| 2-hydroxy-glutarate | 9126.16993 | 93357.42608 | 124743.2806 | ||||||
| 2-hydroxyisocaproate | 0 | 6154.527856 | 7563.933773 | ||||||
| 2-isopropylmalic acid | 9318.271904 | 32305.2513 | 26006.79167 | ||||||
| 2-methyl-malate | 47322.16999 | 147337.0056 | 148228.6592 | ||||||
| 2-oxobutanoate | 1706.542423 | 5182.400179 | 1972.253655 | ||||||
| 2-oxoglutarate | 3825.152833 | 16351.44434 | 8373.118877 | ||||||
| 3,4-dihydroxybenzoate | 2154.914701 | 2729.888575 | 1818.869325 | ||||||
| 3-aminoisobutanoate | 51072.72964 | 53180.989 | 52068.8065 | ||||||
| 3-dehydroshikimate | 0 | 4274.800011 | 2519.69768 | ||||||
| 3-hydroxybenzoate | 1118.434005 | 1577.661383 | 1487.247318 | ||||||
| 3-hydroxyindole | 145483.7357 | 145062.1962 | 161133.4753 | ||||||
| 3-hydroxyisobutanoate | 1443.406185 | 2030.471884 | 4677.262604 | ||||||
| 3-hydroxyisovaleric acid | 0 | 0 | 13350.90751 | ||||||
| 4-hydroxybenzoate | 4347.213233 | 9265.616971 | 6439.181642 | ||||||
| 4-hydroxybutanoate | 8341.833798 | 57319.67342 | 130046.4036 | ||||||
| 4-hydroxyphenylacetonitrile | 1702.447467 | 1965.253942 | 2211.86605 | ||||||
| 4-oxobutanoate | 0 | 2897.024902 | 2276.482706 | ||||||
| 4-oxopentanoic acid | 12512.22651 | 14994.85326 | 15058.76188 | ||||||
| 6-deoxy-mannose | 115413.7129 | 40962.12844 | 1007.050309 | ||||||
| alanine | 186437.366 | 675858.5938 | 377179.5159 | ||||||
| aminomalonic acid | 0 | 32029.00758 | 30254.65806 | ||||||
| arabinonate | 2480.46599 | 2885.912754 | 826.9863153 | ||||||
| arabinono-1,4-lactone | 6041.827278 | 8305.663046 | 0 | ||||||
| arabinose | 113599.8842 | 18742.39801 | 0 | ||||||
| asparagine | 0 | 3974.843049 | 0 | ||||||
| aspartate | 0 | 22641.73173 | 0 | ||||||
| benzene-1,2,4-triol | 2685.662953 | 6543.742449 | 9444.725211 | ||||||
| benzoate | 164377.0865 | 214497.77 | 234102.4865 | ||||||
| beta-Alanine | 111004.0078 | 17010.72479 | 25348.08442 | ||||||
| butylamine | 2583.330356 | 7800.087292 | 3031.189135 | ||||||
| citraconic acid | 13291.46357 | 20733.4688 | 14481.70315 | ||||||
| citrate | 19032.68054 | 31779.28151 | 26073.8232 | ||||||
| cysteine | 0 | 8649.927068 | 7935.665552 | ||||||
| diethylene glycol | 114075.8286 | 126325.7524 | 147065.7096 | ||||||
| erythritol | 6432.784773 | 20202.39974 | 35682.00093 | ||||||
| erythronic acid | 17425.01564 | 52475.53757 | 36736.3588 | ||||||
| erythronic acid-1,4-lactone | 5212.858485 | 16058.7725 | 12997.351 | ||||||
| erythrose | 21921.41473 | 78241.62423 | 44883.12959 | ||||||
| ethanolamine | 30960.5817 | 139357.8415 | 274287.2696 | ||||||
| fructose | 518667.171 | 284286.21 | 3647.387377 | ||||||
| fumarate | 74158.3667 | 89377.55297 | 77311.96085 | ||||||
| galactose | 287798.7167 | 136190.6944 | 0 | ||||||
| gluconic-acid | 53450.97373 | 24254.20329 | 5112.018837 | ||||||
| glucose | 1401777.391 | 680722.0745 | 148902.9758 | ||||||
| glutamine | 96326.14762 | 126582.3145 | 142426.8809 | ||||||
| glyceraldehyde | 9937.889679 | 26075.91615 | 15092.50598 | ||||||
| glycerate | 38642.76494 | 138259.5499 | 57055.02788 | ||||||
| glycerol-3-phosphate | 0 | 2377.851981 | 1843.756899 | ||||||
| glycine | 25679.78888 | 117986.9177 | 76740.94961 | ||||||
| glycolate | 7575.441393 | 14218.2835 | 10748.57535 | ||||||
| hydrocinnamic acid | 18962.46781 | 28176.20618 | 28493.75941 | ||||||
| hydroquinone | 5964.373506 | 1497.075992 | 1384.895708 | ||||||
| hydroxylamine | 42642.97452 | 54994.37608 | 55226.30733 | ||||||
| indole-3-lactate | 0 | 510.5191295 | 568.7783619 | ||||||
| isocaproate | 0 | 5383.709628 | 3284.426331 | ||||||
| isoleucine | 16528.71098 | 38714.57974 | 18782.29433 | ||||||
| isomaltose* | 285.1419036 | 630.276348 | 0 | ||||||
| lactate | 782860.4662 | 994265.4398 | 1215024.733 | ||||||
| laminaribiose* | 3458.983938 | 8499.335859 | 606.5945435 | ||||||
| leucine | 0 | 54179.53124 | 24567.30548 | ||||||
| malate | 415601.0876 | 965945.4366 | 945762.7512 | ||||||
| maleate | 7494.438311 | 42037.55822 | 21269.74702 | ||||||
| malonamide | 313710.7895 | 438380.1751 | 386739.6702 | ||||||
| malonic acid | 0 | 1656.04694 | 1719.925459 | ||||||
| mannonic acid-1,4-lactone | 0 | 492.9970468 | 0 | ||||||
| mannose | 159580.4492 | 47561.44195 | 0 | ||||||
| mannosylglycerate | 8411.381146 | 0 | 0 | ||||||
| methyl 3,6-anhydro-alpha-galactopyranoside | 3513.663272 | 4304.23687 | 3661.989529 | ||||||
| myo-inositol | 0 | 850.0713329 | 0 | ||||||
| N-acetyl-galactosamine | 3671.443836 | 629.3391122 | 0 | ||||||
| N-acetyl-glucosamine | 4287.622265 | 1006.047384 | 0 | ||||||
| N-acetyl-phenylalanine | 0 | 0 | 972.2001417 | ||||||
| nicotinic acid | 21321.99894 | 26841.36041 | 121129.9429 | ||||||
| oxalate | 9393.353043 | 11625.98082 | 10514.72433 | ||||||
| phenylpyruvate | 2495.374715 | 4905.818014 | 4074.834533 | ||||||
| proline | 54337.72263 | 963555.2114 | 789359.9671 | ||||||
| propane-1,2-diol | 12926.23761 | 15962.30631 | 31277.14495 | ||||||
| propane-1,3-diol | 105286.998 | 53200.53431 | 0 | ||||||
| putrescine | 8087.277356 | 0 | 0 | ||||||
| pyridoxal | 0 | 1363.784526 | 519.1638029 | ||||||
| pyroglutamate | 51637.52579 | 282849.0538 | 157454.2446 | ||||||
| pyrrole-2-carboxylate | 6045.629836 | 12082.07825 | 8520.154384 | ||||||
| pyruvate | 126135.6008 | 41206.06283 | 13904.45386 | ||||||
| quinate | 1138.771335 | 1889.73512 | 1362.196213 | ||||||
| ribonate | 3637.443671 | 6401.706855 | 4352.95201 | ||||||
| ribose | 35320.99403 | 54534.9951 | 38510.98767 | ||||||
| shikimic acid | 0 | 130438.5169 | 74191.88895 | ||||||
| sorbitol | 7360.274366 | 0 | 0 | ||||||
| succinate | 2298.598083 | 2452304.88 | 2784346.948 |
