Selected Cell
Cell:
Value:
InvestigationInformation
StudyInformation
AssayInformation
AssayConditions
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| #Template info | |||||||||
| #TemplateVersion | LEI-MIHCSME_userTemplate_v3 | version 3 is updated version including recommendations by users, plus ISA and REMBI compliant. | |||||||
| #DateTemplateGenerated | Jan-20-2023 | ||||||||
| #CreatedBy | RH | ||||||||
| Annotation_groups | Key | Value | Comments_User | Description_Examples_Values | |||||
| DataOwner | First Name | Esmee | First Name | ||||||
| DataOwner | Middle Name(s) | Middle Name(s) if any | |||||||
| DataOwner | Last Name | Koedoot | Last Name | ||||||
| DataOwner | User name | koedoote | Institutional user name | ||||||
| DataOwner | Institute | Leiden University, Faculty of Science, Leiden Academic Centre for Drug Research | Institute level, eg. Universiteit Leiden, Faculty of Science, Institute of Biology | ||||||
| DataOwner | E-Mail Address | e.koedoot@lacdr.leidenuniv.nl | Institution email address | ||||||
| DataOwner | ORCID investigator | https://orcid.org/0000-0002-9041-0075 | orcid id as url, eg. https://orcid.org/0000-0002-3704-3675 | ||||||
| DataCollaborator | ORCID Data Collaborator | ORCID is of collaborator with experimental, collection or analysis part of this investigation | |||||||
| DataCollaborator | ORCID Data Collaborator | ORCID is of collaborator with experimental, collection or analysis part of this investigation | |||||||
| InvestigationInformation | Project ID | NA | EU/NWO/consortium ID – Examples: EuTOX | ||||||
| InvestigationInformation | Investigation Title | RNA splicing in breast cancer progression | High level concept to link related studies. Could be the main hypothesis/question you want to investigate as part of your research. Could be a chapter/thesis of your work. | ||||||
| InvestigationInformation | Investigation internal ID | NA | Corresponding internal ID for your investigation. | ||||||
| InvestigationInformation | Investigation description | investigating the signaling landscape controlling breast cancer cell migration | Short description for your investigation. | ||||||
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| # comments: | |||||||||
| # | |||||||||
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| Annotation_groups | Key | Value | Comments_User | Description_Examples_Values | |||||
| Study | Study Title | Identification of metastasis driver genes controlling breast cancer cell migration using siRNA screening | Manuscript/chapter/publication/paragraph title describing purpose or intention for one or multiple assays (screens/experiments) | ||||||
| Study | Study internal ID | NA | Study ID, linked to ELN or lab journal | ||||||
| Study | Study Description | Triple-negative breast cancer (TNBC) is an aggressive and highly metastatic breast cancer subtype. Enhanced TNBC cell motility is a prerequisite of TNBC cell dissemination. Here | Description of study with additional unstructured information about this study possibly not covered elsewhere in this template. | ||||||
| Study | Study Key Words | [RNAi screening, systems microscopy] | List of key words associated with your study (EFO-terms). Examples: FDA approved drugs, Kinase inhibitors, DNA damage response, Unfolded protein response, Oxidative stress response, Inflammatory signaling, chemical similarity | ||||||
| Biosample | Biosample Taxon | NCBITAXON:9606 | NCBI-taxon id, human = NCBITAXON:9606; | ||||||
| Biosample | Biosample description | TNBC cell lines (Hs578T and MDA-MB-231) | Description of biosample genotype; Additional unstructured information about organisms used in this experiment. | ||||||
| Biosample | Biosample Organism | Homo sapiens | Which organism is your cell lines or tissue from. Examples: Human or mouse | ||||||
| Biosample | Number of cell lines used | 2 | In case multiple cell lines are used indicate here | ||||||
| Library | Library File Name | idr0022-screenA-annotation | Library file info | ||||||
| Library | Library File Format | tab-delimited text | Library file info | ||||||
| Library | Library Type | siRNA library | Library file info | ||||||
| Library | Library Manufacturer | Dharmacon | Library file info | ||||||
| Library | Library Version | NA | Library file info | ||||||
| Library | Library Experimental Conditions | NA | Any experimental conditions some cells were grown under as part of the study enter the information here e.g. different environmental stress conditions, or mutant background compared to wild type. | ||||||
| Library | Quality Control Description | NA | A brief description of the kind of quality control measures that were taken. | ||||||
| Protocols | HCS library protocol | NA | Url/doi protocols.io or ELN associated url. At least SOP/protocol filename | ||||||
| Protocols | growth protocol | Transfection | Reverse transfections were performed at 50nM concentration using 0.3 µl INTERFERin (Polyplus) per well. Transfection reagent and siRNA were incubated for 20 minutes | Url/doi protocols.io or ELN associated url. At least SOP/protocol filename | |||||
| Protocols | treatment protocol | Phagokinetic track assay | Url/doi protocols.io or ELN associated url. At least SOP/protocol filename | ||||||
| Protocols | HCS data analysis protocol | Data analysis | Url/doi protocols.io or ELN associated url. At least SOP/protocol filename | ||||||
| Plate | Plate type | SensoPlate | Example: uclear | ||||||
| Plate | Plate type Manufacturer | Greiner Bio-One | Example: Greiner Bio-One | ||||||
| Plate | Plate type Catalog number | NA | Example:781081 | ||||||
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| Annotation_groups | Key | Value | Comments_User | Description_Examples_Values | |||||
| Assay | Assay Title | ScreenB | Screen name | ||||||
| Assay | Assay internal ID | NA | Experimental ID, e.g. aMV-010, linked to ELN or labjournal | ||||||
| Assay | Assay Description | Validation RNAi screen using smartpool and single siRNAs to validate cell migratory regulators in Hs578T and MDA-MB-231 cells that were identified in the primary screen. | validation screen | Description of screen plus additional unstructured information about screen not covered elsewhere. Stages of HCS: either primary screen, secondary screen or validation screen. EFO terms | |||||
| Assay | Assay number of biological replicates | 4 | single and smartpooled | Total number of biol. Repl. | |||||
| Assay | Number of plates | 152 | Total number of plates, n-plates | ||||||
| Assay | Assay Technology Type | bright-field microscopy | Imaging method, Fbbi terms. | ||||||
| Assay | Assay Type | high content screen of cells treated with library of siRNAs | List of options: sub types of HCS e.g. Gene Knock down, RNAi, compount, EFO terms | ||||||
| Assay | Assay External URL | https://idr.openmicroscopy.org/webclient/?show=screen-2152 | ELN or any other external url link to this screen. | ||||||
| Assay | Assay data URL | https://idr.openmicroscopy.org/webclient/?show=screen-2152 | OMERO url link to this screen. | ||||||
| AssayComponent | Imaging protocol | NA | Migratory tracks were visualized by acquiring whole-well montages (6 x 6 images) on a BD Pathway 855 BioImager using transmitted light and a x10 objective. | Url to protocols.io or protocols in ELN, at least protocol file name or free text description of imaging protocol | |||||
| AssayComponent | Sample preparation protocol | NA | Sample preparation method (Formaldahude (PFA) fixed tissue, Live cells, unfixed tissue). FBbi terms | ||||||
| Biosample | Cell lines storage location | NA | Storage location according to Database used or at least location e.g. Example -150 liquid N2 tank 4th floor GE4.xx | ||||||
| Biosample | Cell lines clone number | NA | Storage location DB info | ||||||
| Biosample | Cell lines Passage number | NA | Passage number of your cells. In case different passage number is used for the replicates, please indicate it in Comment_users. | ||||||
| ImageData | Image number of pixelsX | 672 | Indicate number of pixels in x in images | ||||||
| ImageData | Image number of pixelsY | 512 | Indicate number of pixels in y in images | ||||||
| ImageData | Image number of z-stacks | 1 | Indicate number z stacks in image, single image is z=1 | ||||||
| ImageData | Image number of channels | 1 | Indicate number of channels in your image, single channel image c=1, including your TD channel | ||||||
| ImageData | Image number of timepoints | 1 | Indicate number of time point(s) in your image | ||||||
| ImageData | Image sites per well | 36 | Number of fields, numeric value | ||||||
| ImageAcquisition | Microscope id | BD-pathway | Url to micrometa app file link or other url describing your microscope. At least Microscope name. | ||||||
| Specimen | Channel Transmission id | 1 | only transmission channel is recorded for this study. | Channel id is dependent on different machines, first or last. If No transmission is acquired state NA | |||||
| Specimen | Channel 1 visualization method | Visualization method (example: Hoechst staining ) | |||||||
| Specimen | Channel 1 entity | Entity visualized (example: DNA ) | |||||||
| Specimen | Channel 1 label | Label used for entity (example:Nuclei) Best practice to use similar label as your CP-pipeline | |||||||
| Specimen | Channel 1 id | sequential id of channel order in your image | |||||||
| Specimen | Channel 2 visualization method | Visualization method (example: GFP ) | |||||||
| Specimen | Channel 2 entity | Entity visualized (example: MAP1LC3B ) | |||||||
| Specimen | Channel 2 label | Label used for entity (example:GFP-LC3) Best practice to use similar label as your CP-pipeline | |||||||
| Specimen | Channel 2 id | sequential id of channel order in your image | |||||||
| Specimen | Channel 3 visualization method | Visualization method (example: PI staining ) | |||||||
| Specimen | Channel 3 entity | Entity visualized (example: Death cell DNA ) | |||||||
| Specimen | Channel 3 label | Label used for entity (example:PI) Best practice to use similar label as your CP-pipeline | |||||||
| Specimen | Channel 3 id | sequential id of channel order in your image | |||||||
| Specimen | Channel 4 visualization method | Visualization method (example: Apoptotic marker Annexin V staining ) | |||||||
| Specimen | Channel 4 entity | Entity visualized (example: Apoptotic cells ) | |||||||
| Specimen | Channel 4 label | Label used for entity (example:Annexin-V) Best practice to use similar label as your CP-pipeline | |||||||
| Specimen | Channel 4 id | sequential id of channel order in your image |
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| MDA231_plate_94a | F12 | siRNA | 50 | nmol | MDAMB231 | 72 | 68 | MDA231_plate_94a | 94a | F12 | 72 | Homo sapiens | NCBITaxon | NCBITaxon_9606 | MDAMB231 | EFO | EFO_0001209 | smartpool | DNM2 | 1785 | NM_004945 | 56549118 | Positive | M-004007-01 | ./Validation PKT screen MDA-MB-231/MDA231 hits validation set2/MDA231_plate_94a | |||||||
| MDA231_plate_94a | F2 | siRNA | 50 | nmol | MDAMB231 | 72 | 1 | MDA231_plate_94a | 94a | F2 | 62 | Homo sapiens | NCBITaxon | NCBITaxon_9606 | MDAMB231 | EFO | EFO_0001209 | single | BUD31 | 8896 | NM_003910 | 32171174 | D-018665-01 | ./Validation PKT screen MDA-MB-231/MDA231 hits validation set2/MDA231_plate_94a | ||||||||
| MDA231_plate_94a | F3 | siRNA | 50 | nmol | MDAMB231 | 72 | 1 | MDA231_plate_94a | 94a | F3 | 63 | Homo sapiens | NCBITaxon | NCBITaxon_9606 | MDAMB231 | EFO | EFO_0001209 | single | ST18 | 9705 | NM_014682 | 7662167 | D-008451-01 | ./Validation PKT screen MDA-MB-231/MDA231 hits validation set2/MDA231_plate_94a | ||||||||
| MDA231_plate_94a | F4 | siRNA | 50 | nmol | MDAMB231 | 72 | 1 | MDA231_plate_94a | 94a | F4 | 64 | Homo sapiens | NCBITaxon | NCBITaxon_9606 | MDAMB231 | EFO | EFO_0001209 | single | CLIP2 | 7461 | NM_003388 | 116008448 | D-013511-01 | ./Validation PKT screen MDA-MB-231/MDA231 hits validation set2/MDA231_plate_94a | ||||||||
| MDA231_plate_94a | F5 | siRNA | 50 | nmol | MDAMB231 | 72 | 1 | MDA231_plate_94a | 94a | F5 | 65 | Homo sapiens | NCBITaxon | NCBITaxon_9606 | MDAMB231 | EFO | EFO_0001209 | single | MED21 | 9412 | NM_004264 | 141803148 | D-016221-03 | ./Validation PKT screen MDA-MB-231/MDA231 hits validation set2/MDA231_plate_94a | ||||||||
| MDA231_plate_94a | F6 | siRNA | 50 | nmol | MDAMB231 | 72 | 1 | MDA231_plate_94a | 94a | F6 | 66 | Homo sapiens | NCBITaxon | NCBITaxon_9606 | MDAMB231 | EFO | EFO_0001209 | single | ONECUT2 | 9480 | NM_004852 | 119220563 | D-019872-03 | ./Validation PKT screen MDA-MB-231/MDA231 hits validation set2/MDA231_plate_94a | ||||||||
| MDA231_plate_94a | F7 | siRNA | 50 | nmol | MDAMB231 | 72 | 1 | MDA231_plate_94a | 94a | F7 | 67 | Homo sapiens | NCBITaxon | NCBITaxon_9606 | MDAMB231 | EFO | EFO_0001209 | smartpool | ST18 | 9705 | NM_014682 | 7662167 | D-008451-01 | D-008451-02 | D-008451-03 | D-008451-04 | ./Validation PKT screen MDA-MB-231/MDA231 hits validation set2/MDA231_plate_94a | |||||
| MDA231_plate_94a | F8 | siRNA | 50 | nmol | MDAMB231 | 72 | 1 | MDA231_plate_94a | 94a | F8 | 68 | Homo sapiens | NCBITaxon | NCBITaxon_9606 | MDAMB231 | EFO | EFO_0001209 | single | ONECUT2 | 9480 | NM_004852 | 119220563 | D-019872-04 | ./Validation PKT screen MDA-MB-231/MDA231 hits validation set2/MDA231_plate_94a | ||||||||
| MDA231_plate_94a | F9 | siRNA | 50 | nmol | MDAMB231 | 72 | 1 | MDA231_plate_94a | 94a | F9 | 69 | Homo sapiens | NCBITaxon | NCBITaxon_9606 | MDAMB231 | EFO | EFO_0001209 | single | TARBP1 | 6894 | NM_005646 | 110825987 | D-012151-18 | ./Validation PKT screen MDA-MB-231/MDA231 hits validation set2/MDA231_plate_94a | ||||||||
| MDA231_plate_94a | G1 | siRNA | 50 | nmol | MDAMB231 | 72 | 103 | MDA231_plate_94a | 94a | G1 | 73 | Homo sapiens | NCBITaxon | NCBITaxon_9606 | MDAMB231 | EFO | EFO_0001209 | mock | Negative | ./Validation PKT screen MDA-MB-231/MDA231 hits validation set2/MDA231_plate_94a | ||||||||||||
| MDA231_plate_94a | G10 | siRNA | 50 | nmol | MDAMB231 | 72 | 1 | MDA231_plate_94a | 94a | G10 | 82 | Homo sapiens | NCBITaxon | NCBITaxon_9606 | MDAMB231 | EFO | EFO_0001209 | single | BUD31 | 8896 | NM_003910 | 32171174 | D-018665-03 | ./Validation PKT screen MDA-MB-231/MDA231 hits validation set2/MDA231_plate_94a | ||||||||
| MDA231_plate_94a | G11 | siRNA | 50 | nmol | MDAMB231 | 72 | 1 | MDA231_plate_94a | 94a | G11 | 83 | Homo sapiens | NCBITaxon | NCBITaxon_9606 | MDAMB231 | EFO | EFO_0001209 | single | ZNF215 | 7762 | NM_013250 | 93004073 | D-020661-04 | ./Validation PKT screen MDA-MB-231/MDA231 hits validation set2/MDA231_plate_94a | ||||||||
| MDA231_plate_94a | G12 | siRNA | 50 | nmol | MDAMB231 | 72 | 104 | MDA231_plate_94a | 94a | G12 | 84 | Homo sapiens | NCBITaxon | NCBITaxon_9606 | MDAMB231 | EFO | EFO_0001209 | mock | Negative | ./Validation PKT screen MDA-MB-231/MDA231 hits validation set2/MDA231_plate_94a | ||||||||||||
| MDA231_plate_94a | G2 | siRNA | 50 | nmol | MDAMB231 | 72 | 1 | MDA231_plate_94a | 94a | G2 | 74 | Homo sapiens | NCBITaxon | NCBITaxon_9606 | MDAMB231 | EFO | EFO_0001209 | single | ZNF154 | 7710 | NM_003444 | 145977221 | D-023833-04 | ./Validation PKT screen MDA-MB-231/MDA231 hits validation set2/MDA231_plate_94a | ||||||||
| MDA231_plate_94a | G3 | siRNA | 50 | nmol | MDAMB231 | 72 | 1 | MDA231_plate_94a | 94a | G3 | 75 | Homo sapiens | NCBITaxon | NCBITaxon_9606 | MDAMB231 | EFO | EFO_0001209 | smartpool | VDR | 7421 | NM_000376 | 63054843 | D-003448-02 | D-003448-03 | D-003448-04 | D-003448-17 | ./Validation PKT screen MDA-MB-231/MDA231 hits validation set2/MDA231_plate_94a | |||||
| MDA231_plate_94a | G4 | siRNA | 50 | nmol | MDAMB231 | 72 | 1 | MDA231_plate_94a | 94a | G4 | 76 | Homo sapiens | NCBITaxon | NCBITaxon_9606 | MDAMB231 | EFO | EFO_0001209 | single | ZNF174 | 7727 | NM_003450 | 73808087 | D-019558-01 | ./Validation PKT screen MDA-MB-231/MDA231 hits validation set2/MDA231_plate_94a | ||||||||
| MDA231_plate_94a | G5 | siRNA | 50 | nmol | MDAMB231 | 72 | 1 | MDA231_plate_94a | 94a | G5 | 77 | Homo sapiens | NCBITaxon | NCBITaxon_9606 | MDAMB231 | EFO | EFO_0001209 | single | ZNF187 | 7741 | NM_152736 | 161353476 | D-016249-04 | ./Validation PKT screen MDA-MB-231/MDA231 hits validation set2/MDA231_plate_94a | ||||||||
| MDA231_plate_94a | G6 | siRNA | 50 | nmol | MDAMB231 | 72 | 1 | MDA231_plate_94a | 94a | G6 | 78 | Homo sapiens | NCBITaxon | NCBITaxon_9606 | MDAMB231 | EFO | EFO_0001209 | single | TAF7 | 6879 | NM_005642 | 14717406 | D-013669-04 | ./Validation PKT screen MDA-MB-231/MDA231 hits validation set2/MDA231_plate_94a | ||||||||
| MDA231_plate_94a | G7 | siRNA | 50 | nmol | MDAMB231 | 72 | 1 | MDA231_plate_94a | 94a | G7 | 79 | Homo sapiens | NCBITaxon | NCBITaxon_9606 | MDAMB231 | EFO | EFO_0001209 | smartpool | CLIP2 | 7461 | NM_003388 | 116008448 | D-013511-01 | D-013511-02 | D-013511-03 | D-013511-04 | ./Validation PKT screen MDA-MB-231/MDA231 hits validation set2/MDA231_plate_94a | |||||
| MDA231_plate_94a | G8 | siRNA | 50 | nmol | MDAMB231 | 72 | 1 | MDA231_plate_94a | 94a | G8 | 80 | Homo sapiens | NCBITaxon | NCBITaxon_9606 | MDAMB231 | EFO | EFO_0001209 | smartpool | ZNF174 | 7727 | NM_003450 | 73808087 | D-019558-01 | D-019558-20 | D-019558-21 | D-019558-22 | ./Validation PKT screen MDA-MB-231/MDA231 hits validation set2/MDA231_plate_94a | |||||
| MDA231_plate_94a | G9 | siRNA | 50 | nmol | MDAMB231 | 72 | 1 | MDA231_plate_94a | 94a | G9 | 81 | Homo sapiens | NCBITaxon | NCBITaxon_9606 | MDAMB231 | EFO | EFO_0001209 | smartpool | ZNF215 | 7762 | NM_013250 | 93004073 | D-020661-01 | D-020661-02 | D-020661-03 | D-020661-04 | ./Validation PKT screen MDA-MB-231/MDA231 hits validation set2/MDA231_plate_94a | |||||
| MDA231_plate_94a | H1 | siRNA | 50 | nmol | MDAMB231 | 72 | 68 | MDA231_plate_94a | 94a | H1 | 85 | Homo sapiens | NCBITaxon | NCBITaxon_9606 | MDAMB231 | EFO | EFO_0001209 | smartpool | ILK | 3611 | NM_001014794 | 62420872 | M-004499-00 | ./Validation PKT screen MDA-MB-231/MDA231 hits validation set2/MDA231_plate_94a | ||||||||
| MDA231_plate_94a | H10 | siRNA | 50 | nmol | MDAMB231 | 72 | 1 | MDA231_plate_94a | 94a | H10 | 94 | Homo sapiens | NCBITaxon | NCBITaxon_9606 | MDAMB231 | EFO | EFO_0001209 | smartpool | DNAJB6 | 10049 | NM_005494 | 24234719 | D-013020-01 | D-013020-02 | D-013020-03 | D-013020-04 | ./Validation PKT screen MDA-MB-231/MDA231 hits validation set2/MDA231_plate_94a | |||||
| MDA231_plate_94a | H11 | siRNA | 50 | nmol | MDAMB231 | 72 | 1 | MDA231_plate_94a | 94a | H11 | 95 | Homo sapiens | NCBITaxon | NCBITaxon_9606 | MDAMB231 | EFO | EFO_0001209 | single | ST18 | 9705 | NM_014682 | 7662167 | D-008451-03 | ./Validation PKT screen MDA-MB-231/MDA231 hits validation set2/MDA231_plate_94a | ||||||||
| MDA231_plate_94a | H12 | siRNA | 50 | nmol | MDAMB231 | 72 | 34 | MDA231_plate_94a | 94a | H12 | 96 | Homo sapiens | NCBITaxon | NCBITaxon_9606 | MDAMB231 | EFO | EFO_0001209 | GFP | P-002048-01 | D-001300-01 | ./Validation PKT screen MDA-MB-231/MDA231 hits validation set2/MDA231_plate_94a | |||||||||||
| MDA231_plate_94a | H2 | siRNA | 50 | nmol | MDAMB231 | 72 | 1 | MDA231_plate_94a | 94a | H2 | 86 | Homo sapiens | NCBITaxon | NCBITaxon_9606 | MDAMB231 | EFO | EFO_0001209 | single | CREB5 | 9586 | NM_004904 | 59938775 | D-008436-01 | ./Validation PKT screen MDA-MB-231/MDA231 hits validation set2/MDA231_plate_94a | ||||||||
| MDA231_plate_94a | H3 | siRNA | 50 | nmol | MDAMB231 | 72 | 1 | MDA231_plate_94a | 94a | H3 | 87 | Homo sapiens | NCBITaxon | NCBITaxon_9606 | MDAMB231 | EFO | EFO_0001209 | single | MED12 | 9968 | NM_005120 | 110347428 | D-009092-04 | ./Validation PKT screen MDA-MB-231/MDA231 hits validation set2/MDA231_plate_94a | ||||||||
| MDA231_plate_94a | H4 | siRNA | 50 | nmol | MDAMB231 | 72 | 1 | MDA231_plate_94a | 94a | H4 | 88 | Homo sapiens | NCBITaxon | NCBITaxon_9606 | MDAMB231 | EFO | EFO_0001209 | single | ONECUT2 | 9480 | NM_004852 | 119220563 | D-019872-01 | ./Validation PKT screen MDA-MB-231/MDA231 hits validation set2/MDA231_plate_94a | ||||||||
| MDA231_plate_94a | H5 | siRNA | 50 | nmol | MDAMB231 | 72 | 1 | MDA231_plate_94a | 94a | H5 | 89 | Homo sapiens | NCBITaxon | NCBITaxon_9606 | MDAMB231 | EFO | EFO_0001209 | single | MED21 | 9412 | NM_004264 | 141803148 | D-016221-01 | ./Validation PKT screen MDA-MB-231/MDA231 hits validation set2/MDA231_plate_94a | ||||||||
| MDA231_plate_94a | H6 | siRNA | 50 | nmol | MDAMB231 | 72 | 1 | MDA231_plate_94a | 94a | H6 | 90 | Homo sapiens | NCBITaxon | NCBITaxon_9606 | MDAMB231 | EFO | EFO_0001209 | single | DNAJB6 | 10049 | NM_005494 | 24234719 | D-013020-03 | ./Validation PKT screen MDA-MB-231/MDA231 hits validation set2/MDA231_plate_94a | ||||||||
| MDA231_plate_94a | H7 | siRNA | 50 | nmol | MDAMB231 | 72 | 1 | MDA231_plate_94a | 94a | H7 | 91 | Homo sapiens | NCBITaxon | NCBITaxon_9606 | MDAMB231 | EFO | EFO_0001209 | single | CREB5 | 9586 | NM_004904 | 59938775 | D-008436-22 | ./Validation PKT screen MDA-MB-231/MDA231 hits validation set2/MDA231_plate_94a | ||||||||
| MDA231_plate_94a | H8 | siRNA | 50 | nmol | MDAMB231 | 72 | 1 | MDA231_plate_94a | 94a | H8 | 92 | Homo sapiens | NCBITaxon | NCBITaxon_9606 | MDAMB231 | EFO | EFO_0001209 | smartpool | MED21 | 9412 | NM_004264 | 141803148 | D-016221-01 | D-016221-02 | D-016221-03 | D-016221-04 | ./Validation PKT screen MDA-MB-231/MDA231 hits validation set2/MDA231_plate_94a | |||||
| MDA231_plate_94a | H9 | siRNA | 50 | nmol | MDAMB231 | 72 | 1 | MDA231_plate_94a | 94a | H9 | 93 | Homo sapiens | NCBITaxon | NCBITaxon_9606 | MDAMB231 | EFO | EFO_0001209 | single | NR1D2 | 9975 | NM_005126 | 24307892 | D-003432-02 | ./Validation PKT screen MDA-MB-231/MDA231 hits validation set2/MDA231_plate_94a | ||||||||
| MDA231_plate_94b | A1 | siRNA | 50 | nmol | MDAMB231 | 72 | 35 | MDA231_plate_94b | 94b | A1 | 1 | Homo sapiens | NCBITaxon | NCBITaxon_9606 | MDAMB231 | EFO | EFO_0001209 | GFP | P-002048-01 | D-001300-01 | ./Validation PKT screen MDA-MB-231/MDA231 hits validation set2/MDA231_plate_94b | |||||||||||
| MDA231_plate_94b | A10 | siRNA | 50 | nmol | MDAMB231 | 72 | 2 | MDA231_plate_94b | 94b | A10 | 10 | Homo sapiens | NCBITaxon | NCBITaxon_9606 | MDAMB231 | EFO | EFO_0001209 | single | VDR | 7421 | NM_000376 | 63054843 | D-003448-04 | ./Validation PKT screen MDA-MB-231/MDA231 hits validation set2/MDA231_plate_94b | ||||||||
| MDA231_plate_94b | A11 | siRNA | 50 | nmol | MDAMB231 | 72 | 2 | MDA231_plate_94b | 94b | A11 | 11 | Homo sapiens | NCBITaxon | NCBITaxon_9606 | MDAMB231 | EFO | EFO_0001209 | smartpool | ZNF187 | 7741 | NM_152736 | 161353476 | D-016249-01 | D-016249-02 | D-016249-04 | D-016249-17 | ./Validation PKT screen MDA-MB-231/MDA231 hits validation set2/MDA231_plate_94b | |||||
| MDA231_plate_94b | A12 | siRNA | 50 | nmol | MDAMB231 | 72 | 69 | MDA231_plate_94b | 94b | A12 | 12 | Homo sapiens | NCBITaxon | NCBITaxon_9606 | MDAMB231 | EFO | EFO_0001209 | smartpool | ILK | 3611 | NM_001014794 | 62420872 | M-004499-00 | ./Validation PKT screen MDA-MB-231/MDA231 hits validation set2/MDA231_plate_94b | ||||||||
| MDA231_plate_94b | A2 | siRNA | 50 | nmol | MDAMB231 | 72 | 2 | MDA231_plate_94b | 94b | A2 | 2 | Homo sapiens | NCBITaxon | NCBITaxon_9606 | MDAMB231 | EFO | EFO_0001209 | single | ZNF215 | 7762 | NM_013250 | 93004073 | D-020661-02 | ./Validation PKT screen MDA-MB-231/MDA231 hits validation set2/MDA231_plate_94b | ||||||||
| MDA231_plate_94b | A3 | siRNA | 50 | nmol | MDAMB231 | 72 | 2 | MDA231_plate_94b | 94b | A3 | 3 | Homo sapiens | NCBITaxon | NCBITaxon_9606 | MDAMB231 | EFO | EFO_0001209 | single | TAF7 | 6879 | NM_005642 | 14717406 | D-013669-02 | ./Validation PKT screen MDA-MB-231/MDA231 hits validation set2/MDA231_plate_94b | ||||||||
| MDA231_plate_94b | A4 | siRNA | 50 | nmol | MDAMB231 | 72 | 2 | MDA231_plate_94b | 94b | A4 | 4 | Homo sapiens | NCBITaxon | NCBITaxon_9606 | MDAMB231 | EFO | EFO_0001209 | single | ZNF154 | 7710 | NM_003444 | 145977221 | D-023833-02 | ./Validation PKT screen MDA-MB-231/MDA231 hits validation set2/MDA231_plate_94b | ||||||||
| MDA231_plate_94b | A5 | siRNA | 50 | nmol | MDAMB231 | 72 | 2 | MDA231_plate_94b | 94b | A5 | 5 | Homo sapiens | NCBITaxon | NCBITaxon_9606 | MDAMB231 | EFO | EFO_0001209 | single | ZNF174 | 7727 | NM_003450 | 73808087 | D-019558-22 | ./Validation PKT screen MDA-MB-231/MDA231 hits validation set2/MDA231_plate_94b | ||||||||
| MDA231_plate_94b | A6 | siRNA | 50 | nmol | MDAMB231 | 72 | 2 | MDA231_plate_94b | 94b | A6 | 6 | Homo sapiens | NCBITaxon | NCBITaxon_9606 | MDAMB231 | EFO | EFO_0001209 | smartpool | ONECUT2 | 9480 | NM_004852 | 119220563 | D-019872-01 | D-019872-02 | D-019872-03 | D-019872-04 | ./Validation PKT screen MDA-MB-231/MDA231 hits validation set2/MDA231_plate_94b | |||||
| MDA231_plate_94b | A7 | siRNA | 50 | nmol | MDAMB231 | 72 | 2 | MDA231_plate_94b | 94b | A7 | 7 | Homo sapiens | NCBITaxon | NCBITaxon_9606 | MDAMB231 | EFO | EFO_0001209 | smartpool | TARBP1 | 6894 | NM_005646 | 110825987 | D-012151-02 | D-012151-03 | D-012151-17 | D-012151-18 | ./Validation PKT screen MDA-MB-231/MDA231 hits validation set2/MDA231_plate_94b | |||||
| MDA231_plate_94b | A8 | siRNA | 50 | nmol | MDAMB231 | 72 | 2 | MDA231_plate_94b | 94b | A8 | 8 | Homo sapiens | NCBITaxon | NCBITaxon_9606 | MDAMB231 | EFO | EFO_0001209 | single | ONECUT2 | 9480 | NM_004852 | 119220563 | D-019872-02 | ./Validation PKT screen MDA-MB-231/MDA231 hits validation set2/MDA231_plate_94b | ||||||||
| MDA231_plate_94b | A9 | siRNA | 50 | nmol | MDAMB231 | 72 | 2 | MDA231_plate_94b | 94b | A9 | 9 | Homo sapiens | NCBITaxon | NCBITaxon_9606 | MDAMB231 | EFO | EFO_0001209 | single | CLIP2 | 7461 | NM_003388 | 116008448 | D-013511-02 | ./Validation PKT screen MDA-MB-231/MDA231 hits validation set2/MDA231_plate_94b | ||||||||
| MDA231_plate_94b | B1 | siRNA | 50 | nmol | MDAMB231 | 72 | 105 | MDA231_plate_94b | 94b | B1 | 13 | Homo sapiens | NCBITaxon | NCBITaxon_9606 | MDAMB231 | EFO | EFO_0001209 | mock | Negative | ./Validation PKT screen MDA-MB-231/MDA231 hits validation set2/MDA231_plate_94b | ||||||||||||
| MDA231_plate_94b | B10 | siRNA | 50 | nmol | MDAMB231 | 72 | 2 | MDA231_plate_94b | 94b | B10 | 22 | Homo sapiens | NCBITaxon | NCBITaxon_9606 | MDAMB231 | EFO | EFO_0001209 | single | ST18 | 9705 | NM_014682 | 7662167 | D-008451-04 | ./Validation PKT screen MDA-MB-231/MDA231 hits validation set2/MDA231_plate_94b | ||||||||
| MDA231_plate_94b | B11 | siRNA | 50 | nmol | MDAMB231 | 72 | 2 | MDA231_plate_94b | 94b | B11 | 23 | Homo sapiens | NCBITaxon | NCBITaxon_9606 | MDAMB231 | EFO | EFO_0001209 | single | CREB5 | 9586 | NM_004904 | 59938775 | D-008436-21 | ./Validation PKT screen MDA-MB-231/MDA231 hits validation set2/MDA231_plate_94b | ||||||||
| MDA231_plate_94b | B12 | siRNA | 50 | nmol | MDAMB231 | 72 | 106 | MDA231_plate_94b | 94b | B12 | 24 | Homo sapiens | NCBITaxon | NCBITaxon_9606 | MDAMB231 | EFO | EFO_0001209 | mock | Negative | ./Validation PKT screen MDA-MB-231/MDA231 hits validation set2/MDA231_plate_94b | ||||||||||||
| MDA231_plate_94b | B2 | siRNA | 50 | nmol | MDAMB231 | 72 | 2 | MDA231_plate_94b | 94b | B2 | 14 | Homo sapiens | NCBITaxon | NCBITaxon_9606 | MDAMB231 | EFO | EFO_0001209 | single | ST18 | 9705 | NM_014682 | 7662167 | D-008451-02 | ./Validation PKT screen MDA-MB-231/MDA231 hits validation set2/MDA231_plate_94b | ||||||||
| MDA231_plate_94b | B3 | siRNA | 50 | nmol | MDAMB231 | 72 | 2 | MDA231_plate_94b | 94b | B3 | 15 | Homo sapiens | NCBITaxon | NCBITaxon_9606 | MDAMB231 | EFO | EFO_0001209 | single | MED12 | 9968 | NM_005120 | 110347428 | D-009092-03 | ./Validation PKT screen MDA-MB-231/MDA231 hits validation set2/MDA231_plate_94b | ||||||||
| MDA231_plate_94b | B4 | siRNA | 50 | nmol | MDAMB231 | 72 | 2 | MDA231_plate_94b | 94b | B4 | 16 | Homo sapiens | NCBITaxon | NCBITaxon_9606 | MDAMB231 | EFO | EFO_0001209 | single | DNAJB6 | 10049 | NM_005494 | 24234719 | D-013020-01 | ./Validation PKT screen MDA-MB-231/MDA231 hits validation set2/MDA231_plate_94b | ||||||||
| MDA231_plate_94b | B5 | siRNA | 50 | nmol | MDAMB231 | 72 | 2 | MDA231_plate_94b | 94b | B5 | 17 | Homo sapiens | NCBITaxon | NCBITaxon_9606 | MDAMB231 | EFO | EFO_0001209 | single | MED21 | 9412 | NM_004264 | 141803148 | D-016221-02 | ./Validation PKT screen MDA-MB-231/MDA231 hits validation set2/MDA231_plate_94b | ||||||||
| MDA231_plate_94b | B6 | siRNA | 50 | nmol | MDAMB231 | 72 | 2 | MDA231_plate_94b | 94b | B6 | 18 | Homo sapiens | NCBITaxon | NCBITaxon_9606 | MDAMB231 | EFO | EFO_0001209 | single | NR1D2 | 9975 | NM_005126 | 24307892 | D-003432-03 | ./Validation PKT screen MDA-MB-231/MDA231 hits validation set2/MDA231_plate_94b | ||||||||
| MDA231_plate_94b | B7 | siRNA | 50 | nmol | MDAMB231 | 72 | 2 | MDA231_plate_94b | 94b | B7 | 19 | Homo sapiens | NCBITaxon | NCBITaxon_9606 | MDAMB231 | EFO | EFO_0001209 | smartpool | CREB5 | 9586 | NM_004904 | 59938775 | D-008436-01 | D-008436-20 | D-008436-21 | D-008436-22 | ./Validation PKT screen MDA-MB-231/MDA231 hits validation set2/MDA231_plate_94b | |||||
| MDA231_plate_94b | B8 | siRNA | 50 | nmol | MDAMB231 | 72 | 2 | MDA231_plate_94b | 94b | B8 | 20 | Homo sapiens | NCBITaxon | NCBITaxon_9606 | MDAMB231 | EFO | EFO_0001209 | single | NR1D2 | 9975 | NM_005126 | 24307892 | D-003432-01 | ./Validation PKT screen MDA-MB-231/MDA231 hits validation set2/MDA231_plate_94b | ||||||||
| MDA231_plate_94b | B9 | siRNA | 50 | nmol | MDAMB231 | 72 | 2 | MDA231_plate_94b | 94b | B9 | 21 | Homo sapiens | NCBITaxon | NCBITaxon_9606 | MDAMB231 | EFO | EFO_0001209 | smartpool | MED12 | 9968 | NM_005120 | 110347428 | D-009092-01 | D-009092-02 | D-009092-03 | D-009092-04 | ./Validation PKT screen MDA-MB-231/MDA231 hits validation set2/MDA231_plate_94b | |||||
| MDA231_plate_94b | C1 | siRNA | 50 | nmol | MDAMB231 | 72 | 69 | MDA231_plate_94b | 94b | C1 | 25 | Homo sapiens | NCBITaxon | NCBITaxon_9606 | MDAMB231 | EFO | EFO_0001209 | smartpool | DNM2 | 1785 | NM_004945 | 56549118 | Positive | M-004007-01 | ./Validation PKT screen MDA-MB-231/MDA231 hits validation set2/MDA231_plate_94b | |||||||
| MDA231_plate_94b | C10 | siRNA | 50 | nmol | MDAMB231 | 72 | 2 | MDA231_plate_94b | 94b | C10 | 34 | Homo sapiens | NCBITaxon | NCBITaxon_9606 | MDAMB231 | EFO | EFO_0001209 | single | ZNF174 | 7727 | NM_003450 | 73808087 | D-019558-21 | ./Validation PKT screen MDA-MB-231/MDA231 hits validation set2/MDA231_plate_94b | ||||||||
| MDA231_plate_94b | C11 | siRNA | 50 | nmol | MDAMB231 | 72 | 2 | MDA231_plate_94b | 94b | C11 | 35 | Homo sapiens | NCBITaxon | NCBITaxon_9606 | MDAMB231 | EFO | EFO_0001209 | single | CLIP2 | 7461 | NM_003388 | 116008448 | D-013511-04 | ./Validation PKT screen MDA-MB-231/MDA231 hits validation set2/MDA231_plate_94b | ||||||||
| MDA231_plate_94b | C12 | siRNA | 50 | nmol | MDAMB231 | 72 | 70 | MDA231_plate_94b | 94b | C12 | 36 | Homo sapiens | NCBITaxon | NCBITaxon_9606 | MDAMB231 | EFO | EFO_0001209 | smartpool | DNM2 | 1785 | NM_004945 | 56549118 | Positive | M-004007-01 | ./Validation PKT screen MDA-MB-231/MDA231 hits validation set2/MDA231_plate_94b | |||||||
| MDA231_plate_94b | C2 | siRNA | 50 | nmol | MDAMB231 | 72 | 2 | MDA231_plate_94b | 94b | C2 | 26 | Homo sapiens | NCBITaxon | NCBITaxon_9606 | MDAMB231 | EFO | EFO_0001209 | single | TARBP1 | 6894 | NM_005646 | 110825987 | D-012151-17 | ./Validation PKT screen MDA-MB-231/MDA231 hits validation set2/MDA231_plate_94b | ||||||||
| MDA231_plate_94b | C3 | siRNA | 50 | nmol | MDAMB231 | 72 | 2 | MDA231_plate_94b | 94b | C3 | 27 | Homo sapiens | NCBITaxon | NCBITaxon_9606 | MDAMB231 | EFO | EFO_0001209 | single | CLIP2 | 7461 | NM_003388 | 116008448 | D-013511-03 | ./Validation PKT screen MDA-MB-231/MDA231 hits validation set2/MDA231_plate_94b | ||||||||
| MDA231_plate_94b | C4 | siRNA | 50 | nmol | MDAMB231 | 72 | 2 | MDA231_plate_94b | 94b | C4 | 28 | Homo sapiens | NCBITaxon | NCBITaxon_9606 | MDAMB231 | EFO | EFO_0001209 | single | BUD31 | 8896 | NM_003910 | 32171174 | D-018665-02 | ./Validation PKT screen MDA-MB-231/MDA231 hits validation set2/MDA231_plate_94b | ||||||||
| MDA231_plate_94b | C5 | siRNA | 50 | nmol | MDAMB231 | 72 | 2 | MDA231_plate_94b | 94b | C5 | 29 | Homo sapiens | NCBITaxon | NCBITaxon_9606 | MDAMB231 | EFO | EFO_0001209 | single | NR1D2 | 9975 | NM_005126 | 24307892 | D-003432-04 | ./Validation PKT screen MDA-MB-231/MDA231 hits validation set2/MDA231_plate_94b | ||||||||
| MDA231_plate_94b | C6 | siRNA | 50 | nmol | MDAMB231 | 72 | 2 | MDA231_plate_94b | 94b | C6 | 30 | Homo sapiens | NCBITaxon | NCBITaxon_9606 | MDAMB231 | EFO | EFO_0001209 | single | MED21 | 9412 | NM_004264 | 141803148 | D-016221-04 | ./Validation PKT screen MDA-MB-231/MDA231 hits validation set2/MDA231_plate_94b | ||||||||
| MDA231_plate_94b | C7 | siRNA | 50 | nmol | MDAMB231 | 72 | 2 | MDA231_plate_94b | 94b | C7 | 31 | Homo sapiens | NCBITaxon | NCBITaxon_9606 | MDAMB231 | EFO | EFO_0001209 | single | DNAJB6 | 10049 | NM_005494 | 24234719 | D-013020-02 | ./Validation PKT screen MDA-MB-231/MDA231 hits validation set2/MDA231_plate_94b | ||||||||
| MDA231_plate_94b | C8 | siRNA | 50 | nmol | MDAMB231 | 72 | 2 | MDA231_plate_94b | 94b | C8 | 32 | Homo sapiens | NCBITaxon | NCBITaxon_9606 | MDAMB231 | EFO | EFO_0001209 | single | ZNF187 | 7741 | NM_152736 | 161353476 | D-016249-17 | ./Validation PKT screen MDA-MB-231/MDA231 hits validation set2/MDA231_plate_94b | ||||||||
| MDA231_plate_94b | C9 | siRNA | 50 | nmol | MDAMB231 | 72 | 2 | MDA231_plate_94b | 94b | C9 | 33 | Homo sapiens | NCBITaxon | NCBITaxon_9606 | MDAMB231 | EFO | EFO_0001209 | smartpool | TAF7 | 6879 | NM_005642 | 14717406 | D-013669-02 | D-013669-03 | D-013669-04 | D-013669-17 | ./Validation PKT screen MDA-MB-231/MDA231 hits validation set2/MDA231_plate_94b | |||||
| MDA231_plate_94b | D1 | siRNA | 50 | nmol | MDAMB231 | 72 | 70 | MDA231_plate_94b | 94b | D1 | 37 | Homo sapiens | NCBITaxon | NCBITaxon_9606 | MDAMB231 | EFO | EFO_0001209 | smartpool | ILK | 3611 | NM_001014794 | 62420872 | M-004499-00 | ./Validation PKT screen MDA-MB-231/MDA231 hits validation set2/MDA231_plate_94b | ||||||||
| MDA231_plate_94b | D10 | siRNA | 50 | nmol | MDAMB231 | 72 | 2 | MDA231_plate_94b | 94b | D10 | 46 | Homo sapiens | NCBITaxon | NCBITaxon_9606 | MDAMB231 | EFO | EFO_0001209 | single | BUD31 | 8896 | NM_003910 | 32171174 | D-018665-04 | ./Validation PKT screen MDA-MB-231/MDA231 hits validation set2/MDA231_plate_94b | ||||||||
| MDA231_plate_94b | D11 | siRNA | 50 | nmol | MDAMB231 | 72 | 2 | MDA231_plate_94b | 94b | D11 | 47 | Homo sapiens | NCBITaxon | NCBITaxon_9606 | MDAMB231 | EFO | EFO_0001209 | single | TARBP1 | 6894 | NM_005646 | 110825987 | D-012151-03 | ./Validation PKT screen MDA-MB-231/MDA231 hits validation set2/MDA231_plate_94b | ||||||||
| MDA231_plate_94b | D12 | siRNA | 50 | nmol | MDAMB231 | 72 | 107 | MDA231_plate_94b | 94b | D12 | 48 | Homo sapiens | NCBITaxon | NCBITaxon_9606 | MDAMB231 | EFO | EFO_0001209 | mock | Negative | ./Validation PKT screen MDA-MB-231/MDA231 hits validation set2/MDA231_plate_94b | ||||||||||||
| MDA231_plate_94b | D2 | siRNA | 50 | nmol | MDAMB231 | 72 | 2 | MDA231_plate_94b | 94b | D2 | 38 | Homo sapiens | NCBITaxon | NCBITaxon_9606 | MDAMB231 | EFO | EFO_0001209 | single | VDR | 7421 | NM_000376 | 63054843 | D-003448-03 | ./Validation PKT screen MDA-MB-231/MDA231 hits validation set2/MDA231_plate_94b | ||||||||
| MDA231_plate_94b | D3 | siRNA | 50 | nmol | MDAMB231 | 72 | 2 | MDA231_plate_94b | 94b | D3 | 39 | Homo sapiens | NCBITaxon | NCBITaxon_9606 | MDAMB231 | EFO | EFO_0001209 | single | ZNF187 | 7741 | NM_152736 | 161353476 | D-016249-01 | ./Validation PKT screen MDA-MB-231/MDA231 hits validation set2/MDA231_plate_94b | ||||||||
| MDA231_plate_94b | D4 | siRNA | 50 | nmol | MDAMB231 | 72 | 2 | MDA231_plate_94b | 94b | D4 | 40 | Homo sapiens | NCBITaxon | NCBITaxon_9606 | MDAMB231 | EFO | EFO_0001209 | single | ZNF154 | 7710 | NM_003444 | 145977221 | D-023833-01 | ./Validation PKT screen MDA-MB-231/MDA231 hits validation set2/MDA231_plate_94b | ||||||||
| MDA231_plate_94b | D5 | siRNA | 50 | nmol | MDAMB231 | 72 | 2 | MDA231_plate_94b | 94b | D5 | 41 | Homo sapiens | NCBITaxon | NCBITaxon_9606 | MDAMB231 | EFO | EFO_0001209 | smartpool | BUD31 | 8896 | NM_003910 | 32171174 | D-018665-01 | D-018665-02 | D-018665-03 | D-018665-04 | ./Validation PKT screen MDA-MB-231/MDA231 hits validation set2/MDA231_plate_94b | |||||
| MDA231_plate_94b | D6 | siRNA | 50 | nmol | MDAMB231 | 72 | 2 | MDA231_plate_94b | 94b | D6 | 42 | Homo sapiens | NCBITaxon | NCBITaxon_9606 | MDAMB231 | EFO | EFO_0001209 | single | MED12 | 9968 | NM_005120 | 110347428 | D-009092-02 | ./Validation PKT screen MDA-MB-231/MDA231 hits validation set2/MDA231_plate_94b | ||||||||
| MDA231_plate_94b | D7 | siRNA | 50 | nmol | MDAMB231 | 72 | 2 | MDA231_plate_94b | 94b | D7 | 43 | Homo sapiens | NCBITaxon | NCBITaxon_9606 | MDAMB231 | EFO | EFO_0001209 | smartpool | NR1D2 | 9975 | NM_005126 | 24307892 | D-003432-01 | D-003432-02 | D-003432-03 | D-003432-04 | ./Validation PKT screen MDA-MB-231/MDA231 hits validation set2/MDA231_plate_94b | |||||
| MDA231_plate_94b | D8 | siRNA | 50 | nmol | MDAMB231 | 72 | 2 | MDA231_plate_94b | 94b | D8 | 44 | Homo sapiens | NCBITaxon | NCBITaxon_9606 | MDAMB231 | EFO | EFO_0001209 | single | DNAJB6 | 10049 | NM_005494 | 24234719 | D-013020-04 | ./Validation PKT screen MDA-MB-231/MDA231 hits validation set2/MDA231_plate_94b | ||||||||
| MDA231_plate_94b | D9 | siRNA | 50 | nmol | MDAMB231 | 72 | 2 | MDA231_plate_94b | 94b | D9 | 45 | Homo sapiens | NCBITaxon | NCBITaxon_9606 | MDAMB231 | EFO | EFO_0001209 | single | ZNF154 | 7710 | NM_003444 | 145977221 | D-023833-03 | ./Validation PKT screen MDA-MB-231/MDA231 hits validation set2/MDA231_plate_94b | ||||||||
| MDA231_plate_94b | E1 | siRNA | 50 | nmol | MDAMB231 | 72 | 108 | MDA231_plate_94b | 94b | E1 | 49 | Homo sapiens | NCBITaxon | NCBITaxon_9606 | MDAMB231 | EFO | EFO_0001209 | mock | Negative | ./Validation PKT screen MDA-MB-231/MDA231 hits validation set2/MDA231_plate_94b | ||||||||||||
| MDA231_plate_94b | E10 | siRNA | 50 | nmol | MDAMB231 | 72 | 2 | MDA231_plate_94b | 94b | E10 | 58 | Homo sapiens | NCBITaxon | NCBITaxon_9606 | MDAMB231 | EFO | EFO_0001209 | single | MED12 | 9968 | NM_005120 | 110347428 | D-009092-01 | ./Validation PKT screen MDA-MB-231/MDA231 hits validation set2/MDA231_plate_94b | ||||||||
| MDA231_plate_94b | E11 | siRNA | 50 | nmol | MDAMB231 | 72 | 2 | MDA231_plate_94b | 94b | E11 | 59 | Homo sapiens | NCBITaxon | NCBITaxon_9606 | MDAMB231 | EFO | EFO_0001209 | single | VDR | 7421 | NM_000376 | 63054843 | D-003448-17 | ./Validation PKT screen MDA-MB-231/MDA231 hits validation set2/MDA231_plate_94b | ||||||||
| MDA231_plate_94b | E12 | siRNA | 50 | nmol | MDAMB231 | 72 | 71 | MDA231_plate_94b | 94b | E12 | 60 | Homo sapiens | NCBITaxon | NCBITaxon_9606 | MDAMB231 | EFO | EFO_0001209 | smartpool | ILK | 3611 | NM_001014794 | 62420872 | M-004499-00 | ./Validation PKT screen MDA-MB-231/MDA231 hits validation set2/MDA231_plate_94b | ||||||||
| MDA231_plate_94b | E2 | siRNA | 50 | nmol | MDAMB231 | 72 | 2 | MDA231_plate_94b | 94b | E2 | 50 | Homo sapiens | NCBITaxon | NCBITaxon_9606 | MDAMB231 | EFO | EFO_0001209 | single | TAF7 | 6879 | NM_005642 | 14717406 | D-013669-03 | ./Validation PKT screen MDA-MB-231/MDA231 hits validation set2/MDA231_plate_94b | ||||||||
| MDA231_plate_94b | E3 | siRNA | 50 | nmol | MDAMB231 | 72 | 2 | MDA231_plate_94b | 94b | E3 | 51 | Homo sapiens | NCBITaxon | NCBITaxon_9606 | MDAMB231 | EFO | EFO_0001209 | single | ZNF215 | 7762 | NM_013250 | 93004073 | D-020661-03 | ./Validation PKT screen MDA-MB-231/MDA231 hits validation set2/MDA231_plate_94b | ||||||||
| MDA231_plate_94b | E4 | siRNA | 50 | nmol | MDAMB231 | 72 | 2 | MDA231_plate_94b | 94b | E4 | 52 | Homo sapiens | NCBITaxon | NCBITaxon_9606 | MDAMB231 | EFO | EFO_0001209 | single | ZNF174 | 7727 | NM_003450 | 73808087 | D-019558-20 | ./Validation PKT screen MDA-MB-231/MDA231 hits validation set2/MDA231_plate_94b | ||||||||
| MDA231_plate_94b | E5 | siRNA | 50 | nmol | MDAMB231 | 72 | 2 | MDA231_plate_94b | 94b | E5 | 53 | Homo sapiens | NCBITaxon | NCBITaxon_9606 | MDAMB231 | EFO | EFO_0001209 | single | TARBP1 | 6894 | NM_005646 | 110825987 | D-012151-02 | ./Validation PKT screen MDA-MB-231/MDA231 hits validation set2/MDA231_plate_94b | ||||||||
| MDA231_plate_94b | E6 | siRNA | 50 | nmol | MDAMB231 | 72 | 2 | MDA231_plate_94b | 94b | E6 | 54 | Homo sapiens | NCBITaxon | NCBITaxon_9606 | MDAMB231 | EFO | EFO_0001209 | single | CREB5 | 9586 | NM_004904 | 59938775 | D-008436-20 | ./Validation PKT screen MDA-MB-231/MDA231 hits validation set2/MDA231_plate_94b | ||||||||
| MDA231_plate_94b | E7 | siRNA | 50 | nmol | MDAMB231 | 72 | 2 | MDA231_plate_94b | 94b | E7 | 55 | Homo sapiens | NCBITaxon | NCBITaxon_9606 | MDAMB231 | EFO | EFO_0001209 | single | VDR | 7421 | NM_000376 | 63054843 | D-003448-02 | ./Validation PKT screen MDA-MB-231/MDA231 hits validation set2/MDA231_plate_94b | ||||||||
| MDA231_plate_94b | E8 | siRNA | 50 | nmol | MDAMB231 | 72 | 2 | MDA231_plate_94b | 94b | E8 | 56 | Homo sapiens | NCBITaxon | NCBITaxon_9606 | MDAMB231 | EFO | EFO_0001209 | single | ZNF187 | 7741 | NM_152736 | 161353476 | D-016249-02 | ./Validation PKT screen MDA-MB-231/MDA231 hits validation set2/MDA231_plate_94b | ||||||||
| MDA231_plate_94b | E9 | siRNA | 50 | nmol | MDAMB231 | 72 | 2 | MDA231_plate_94b | 94b | E9 | 57 | Homo sapiens | NCBITaxon | NCBITaxon_9606 | MDAMB231 | EFO | EFO_0001209 | single | ZNF215 | 7762 | NM_013250 | 93004073 | D-020661-01 | ./Validation PKT screen MDA-MB-231/MDA231 hits validation set2/MDA231_plate_94b | ||||||||
| MDA231_plate_94b | F1 | siRNA | 50 | nmol | MDAMB231 | 72 | 71 | MDA231_plate_94b | 94b | F1 | 61 | Homo sapiens | NCBITaxon | NCBITaxon_9606 | MDAMB231 | EFO | EFO_0001209 | smartpool | DNM2 | 1785 | NM_004945 | 56549118 | Positive | M-004007-01 | ./Validation PKT screen MDA-MB-231/MDA231 hits validation set2/MDA231_plate_94b | |||||||
| MDA231_plate_94b | F10 | siRNA | 50 | nmol | MDAMB231 | 72 | 2 | MDA231_plate_94b | 94b | F10 | 70 | Homo sapiens | NCBITaxon | NCBITaxon_9606 | MDAMB231 | EFO | EFO_0001209 | smartpool | ZNF154 | 7710 | NM_003444 | 145977221 | D-023833-01 | D-023833-02 | D-023833-03 | D-023833-04 | ./Validation PKT screen MDA-MB-231/MDA231 hits validation set2/MDA231_plate_94b | |||||
| MDA231_plate_94b | F11 | siRNA | 50 | nmol | MDAMB231 | 72 | 2 | MDA231_plate_94b | 94b | F11 | 71 | Homo sapiens | NCBITaxon | NCBITaxon_9606 | MDAMB231 | EFO | EFO_0001209 | single | TAF7 | 6879 | NM_005642 | 14717406 | D-013669-17 | ./Validation PKT screen MDA-MB-231/MDA231 hits validation set2/MDA231_plate_94b | ||||||||
| MDA231_plate_94b | F12 | siRNA | 50 | nmol | MDAMB231 | 72 | 72 | MDA231_plate_94b | 94b | F12 | 72 | Homo sapiens | NCBITaxon | NCBITaxon_9606 | MDAMB231 | EFO | EFO_0001209 | smartpool | DNM2 | 1785 | NM_004945 | 56549118 | Positive | M-004007-01 | ./Validation PKT screen MDA-MB-231/MDA231 hits validation set2/MDA231_plate_94b | |||||||
| MDA231_plate_94b | F2 | siRNA | 50 | nmol | MDAMB231 | 72 | 2 | MDA231_plate_94b | 94b | F2 | 62 | Homo sapiens | NCBITaxon | NCBITaxon_9606 | MDAMB231 | EFO | EFO_0001209 | single | BUD31 | 8896 | NM_003910 | 32171174 | D-018665-01 | ./Validation PKT screen MDA-MB-231/MDA231 hits validation set2/MDA231_plate_94b | ||||||||
| MDA231_plate_94b | F3 | siRNA | 50 | nmol | MDAMB231 | 72 | 2 | MDA231_plate_94b | 94b | F3 | 63 | Homo sapiens | NCBITaxon | NCBITaxon_9606 | MDAMB231 | EFO | EFO_0001209 | single | ST18 | 9705 | NM_014682 | 7662167 | D-008451-01 | ./Validation PKT screen MDA-MB-231/MDA231 hits validation set2/MDA231_plate_94b | ||||||||
| MDA231_plate_94b | F4 | siRNA | 50 | nmol | MDAMB231 | 72 | 2 | MDA231_plate_94b | 94b | F4 | 64 | Homo sapiens | NCBITaxon | NCBITaxon_9606 | MDAMB231 | EFO | EFO_0001209 | single | CLIP2 | 7461 | NM_003388 | 116008448 | D-013511-01 | ./Validation PKT screen MDA-MB-231/MDA231 hits validation set2/MDA231_plate_94b |
