Selected Cell
Cell:
Value:
InvestigationInformation
StudyInformation
AssayInformation
AssayConditions
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| #Template info | |||||||||
| #TemplateVersion | LEI-MIHCSME_userTemplate_v3 | version 3 is updated version including recommendations by users, plus ISA and REMBI compliant. | |||||||
| #DateTemplateGenerated | Jan-20-2023 | ||||||||
| #CreatedBy | RH | ||||||||
| Annotation_groups | Key | Value | Comments_User | Description_Examples_Values | |||||
| DataOwner | First Name | Esmee | First Name | ||||||
| DataOwner | Middle Name(s) | Middle Name(s) if any | |||||||
| DataOwner | Last Name | Koedoot | Last Name | ||||||
| DataOwner | User name | koedoote | Institutional user name | ||||||
| DataOwner | Institute | Leiden University, Faculty of Science, Leiden Academic Centre for Drug Research | Institute level, eg. Universiteit Leiden, Faculty of Science, Institute of Biology | ||||||
| DataOwner | E-Mail Address | e.koedoot@lacdr.leidenuniv.nl | Institution email address | ||||||
| DataOwner | ORCID investigator | https://orcid.org/0000-0002-9041-0075 | orcid id as url, eg. https://orcid.org/0000-0002-3704-3675 | ||||||
| DataCollaborator | ORCID Data Collaborator | ORCID is of collaborator with experimental, collection or analysis part of this investigation | |||||||
| DataCollaborator | ORCID Data Collaborator | ORCID is of collaborator with experimental, collection or analysis part of this investigation | |||||||
| InvestigationInformation | Project ID | NA | EU/NWO/consortium ID – Examples: EuTOX | ||||||
| InvestigationInformation | Investigation Title | RNA splicing in breast cancer progression | High level concept to link related studies. Could be the main hypothesis/question you want to investigate as part of your research. Could be a chapter/thesis of your work. | ||||||
| InvestigationInformation | Investigation internal ID | NA | Corresponding internal ID for your investigation. | ||||||
| InvestigationInformation | Investigation description | investigating the signaling landscape controlling breast cancer cell migration | Short description for your investigation. | ||||||
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| # comments: | |||||||||
| # | |||||||||
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| Annotation_groups | Key | Value | Comments_User | Description_Examples_Values | |||||
| Study | Study Title | Identification of metastasis driver genes controlling breast cancer cell migration using siRNA screening | Manuscript/chapter/publication/paragraph title describing purpose or intention for one or multiple assays (screens/experiments) | ||||||
| Study | Study internal ID | NA | Study ID, linked to ELN or lab journal | ||||||
| Study | Study Description | Triple-negative breast cancer (TNBC) is an aggressive and highly metastatic breast cancer subtype. Enhanced TNBC cell motility is a prerequisite of TNBC cell dissemination. Here | Description of study with additional unstructured information about this study possibly not covered elsewhere in this template. | ||||||
| Study | Study Key Words | [RNAi screening, systems microscopy] | List of key words associated with your study (EFO-terms). Examples: FDA approved drugs, Kinase inhibitors, DNA damage response, Unfolded protein response, Oxidative stress response, Inflammatory signaling, chemical similarity | ||||||
| Biosample | Biosample Taxon | NCBITAXON:9606 | NCBI-taxon id, human = NCBITAXON:9606; | ||||||
| Biosample | Biosample description | TNBC cell lines (Hs578T and MDA-MB-231) | Description of biosample genotype; Additional unstructured information about organisms used in this experiment. | ||||||
| Biosample | Biosample Organism | Homo sapiens | Which organism is your cell lines or tissue from. Examples: Human or mouse | ||||||
| Biosample | Number of cell lines used | 2 | In case multiple cell lines are used indicate here | ||||||
| Library | Library File Name | idr0022-screenA-annotation | Library file info | ||||||
| Library | Library File Format | tab-delimited text | Library file info | ||||||
| Library | Library Type | siRNA library | Library file info | ||||||
| Library | Library Manufacturer | Dharmacon | Library file info | ||||||
| Library | Library Version | NA | Library file info | ||||||
| Library | Library Experimental Conditions | NA | Any experimental conditions some cells were grown under as part of the study enter the information here e.g. different environmental stress conditions, or mutant background compared to wild type. | ||||||
| Library | Quality Control Description | NA | A brief description of the kind of quality control measures that were taken. | ||||||
| Protocols | HCS library protocol | NA | Url/doi protocols.io or ELN associated url. At least SOP/protocol filename | ||||||
| Protocols | growth protocol | Transfection | Reverse transfections were performed at 50nM concentration using 0.3 µl INTERFERin (Polyplus) per well. Transfection reagent and siRNA were incubated for 20 minutes | Url/doi protocols.io or ELN associated url. At least SOP/protocol filename | |||||
| Protocols | treatment protocol | Phagokinetic track assay | Url/doi protocols.io or ELN associated url. At least SOP/protocol filename | ||||||
| Protocols | HCS data analysis protocol | Data analysis | Url/doi protocols.io or ELN associated url. At least SOP/protocol filename | ||||||
| Plate | Plate type | SensoPlate | Example: uclear | ||||||
| Plate | Plate type Manufacturer | Greiner Bio-One | Example: Greiner Bio-One | ||||||
| Plate | Plate type Catalog number | NA | Example:781081 | ||||||
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| Annotation_groups | Key | Value | Comments_User | Description_Examples_Values | |||||
| Assay | Assay Title | ScreenB | Screen name | ||||||
| Assay | Assay internal ID | NA | Experimental ID, e.g. aMV-010, linked to ELN or labjournal | ||||||
| Assay | Assay Description | Validation RNAi screen using smartpool and single siRNAs to validate cell migratory regulators in Hs578T and MDA-MB-231 cells that were identified in the primary screen. | validation screen | Description of screen plus additional unstructured information about screen not covered elsewhere. Stages of HCS: either primary screen, secondary screen or validation screen. EFO terms | |||||
| Assay | Assay number of biological replicates | 4 | single and smartpooled | Total number of biol. Repl. | |||||
| Assay | Number of plates | 152 | Total number of plates, n-plates | ||||||
| Assay | Assay Technology Type | bright-field microscopy | Imaging method, Fbbi terms. | ||||||
| Assay | Assay Type | high content screen of cells treated with library of siRNAs | List of options: sub types of HCS e.g. Gene Knock down, RNAi, compount, EFO terms | ||||||
| Assay | Assay External URL | https://idr.openmicroscopy.org/webclient/?show=screen-2152 | ELN or any other external url link to this screen. | ||||||
| Assay | Assay data URL | https://idr.openmicroscopy.org/webclient/?show=screen-2152 | OMERO url link to this screen. | ||||||
| AssayComponent | Imaging protocol | NA | Migratory tracks were visualized by acquiring whole-well montages (6 x 6 images) on a BD Pathway 855 BioImager using transmitted light and a x10 objective. | Url to protocols.io or protocols in ELN, at least protocol file name or free text description of imaging protocol | |||||
| AssayComponent | Sample preparation protocol | NA | Sample preparation method (Formaldahude (PFA) fixed tissue, Live cells, unfixed tissue). FBbi terms | ||||||
| Biosample | Cell lines storage location | NA | Storage location according to Database used or at least location e.g. Example -150 liquid N2 tank 4th floor GE4.xx | ||||||
| Biosample | Cell lines clone number | NA | Storage location DB info | ||||||
| Biosample | Cell lines Passage number | NA | Passage number of your cells. In case different passage number is used for the replicates, please indicate it in Comment_users. | ||||||
| ImageData | Image number of pixelsX | 672 | Indicate number of pixels in x in images | ||||||
| ImageData | Image number of pixelsY | 512 | Indicate number of pixels in y in images | ||||||
| ImageData | Image number of z-stacks | 1 | Indicate number z stacks in image, single image is z=1 | ||||||
| ImageData | Image number of channels | 1 | Indicate number of channels in your image, single channel image c=1, including your TD channel | ||||||
| ImageData | Image number of timepoints | 1 | Indicate number of time point(s) in your image | ||||||
| ImageData | Image sites per well | 36 | Number of fields, numeric value | ||||||
| ImageAcquisition | Microscope id | BD-pathway | Url to micrometa app file link or other url describing your microscope. At least Microscope name. | ||||||
| Specimen | Channel Transmission id | 1 | only transmission channel is recorded for this study. | Channel id is dependent on different machines, first or last. If No transmission is acquired state NA | |||||
| Specimen | Channel 1 visualization method | Visualization method (example: Hoechst staining ) | |||||||
| Specimen | Channel 1 entity | Entity visualized (example: DNA ) | |||||||
| Specimen | Channel 1 label | Label used for entity (example:Nuclei) Best practice to use similar label as your CP-pipeline | |||||||
| Specimen | Channel 1 id | sequential id of channel order in your image | |||||||
| Specimen | Channel 2 visualization method | Visualization method (example: GFP ) | |||||||
| Specimen | Channel 2 entity | Entity visualized (example: MAP1LC3B ) | |||||||
| Specimen | Channel 2 label | Label used for entity (example:GFP-LC3) Best practice to use similar label as your CP-pipeline | |||||||
| Specimen | Channel 2 id | sequential id of channel order in your image | |||||||
| Specimen | Channel 3 visualization method | Visualization method (example: PI staining ) | |||||||
| Specimen | Channel 3 entity | Entity visualized (example: Death cell DNA ) | |||||||
| Specimen | Channel 3 label | Label used for entity (example:PI) Best practice to use similar label as your CP-pipeline | |||||||
| Specimen | Channel 3 id | sequential id of channel order in your image | |||||||
| Specimen | Channel 4 visualization method | Visualization method (example: Apoptotic marker Annexin V staining ) | |||||||
| Specimen | Channel 4 entity | Entity visualized (example: Apoptotic cells ) | |||||||
| Specimen | Channel 4 label | Label used for entity (example:Annexin-V) Best practice to use similar label as your CP-pipeline | |||||||
| Specimen | Channel 4 id | sequential id of channel order in your image |
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| MDA231_plate_97d | B9 | siRNA | 50 | nmol | MDAMB231 | 72 | 4 | MDA231_plate_97d | 97d | B9 | 21 | Homo sapiens | NCBITaxon | NCBITaxon_9606 | MDAMB231 | EFO | EFO_0001209 | single | PVRL3 | 25945 | NM_015480 | 11386198 | D-013952-02 | ./Validation PKT screen MDA-MB-231/MDA231 hits validation set2/MDA231_plate_97d | ||||||||
| MDA231_plate_97d | C1 | siRNA | 50 | nmol | MDAMB231 | 72 | 125 | MDA231_plate_97d | 97d | C1 | 25 | Homo sapiens | NCBITaxon | NCBITaxon_9606 | MDAMB231 | EFO | EFO_0001209 | smartpool | DNM2 | 1785 | NM_004945 | 56549118 | Positive | M-004007-01 | ./Validation PKT screen MDA-MB-231/MDA231 hits validation set2/MDA231_plate_97d | |||||||
| MDA231_plate_97d | C10 | siRNA | 50 | nmol | MDAMB231 | 72 | 4 | MDA231_plate_97d | 97d | C10 | 34 | Homo sapiens | NCBITaxon | NCBITaxon_9606 | MDAMB231 | EFO | EFO_0001209 | single | PVRL3 | 25945 | NM_015480 | 11386198 | D-013952-03 | ./Validation PKT screen MDA-MB-231/MDA231 hits validation set2/MDA231_plate_97d | ||||||||
| MDA231_plate_97d | C11 | siRNA | 50 | nmol | MDAMB231 | 72 | 4 | MDA231_plate_97d | 97d | C11 | 35 | Homo sapiens | NCBITaxon | NCBITaxon_9606 | MDAMB231 | EFO | EFO_0001209 | single | GPBAR1 | 151306 | NM_170699 | 116284380 | D-005519-04 | ./Validation PKT screen MDA-MB-231/MDA231 hits validation set2/MDA231_plate_97d | ||||||||
| MDA231_plate_97d | C12 | siRNA | 50 | nmol | MDAMB231 | 72 | 126 | MDA231_plate_97d | 97d | C12 | 36 | Homo sapiens | NCBITaxon | NCBITaxon_9606 | MDAMB231 | EFO | EFO_0001209 | smartpool | DNM2 | 1785 | NM_004945 | 56549118 | Positive | M-004007-01 | ./Validation PKT screen MDA-MB-231/MDA231 hits validation set2/MDA231_plate_97d | |||||||
| MDA231_plate_97d | C2 | siRNA | 50 | nmol | MDAMB231 | 72 | 4 | MDA231_plate_97d | 97d | C2 | 26 | Homo sapiens | NCBITaxon | NCBITaxon_9606 | MDAMB231 | EFO | EFO_0001209 | single | PTPNS1 | 140885 | NM_080792 | 91105786 | D-013223-01 | ./Validation PKT screen MDA-MB-231/MDA231 hits validation set2/MDA231_plate_97d | ||||||||
| MDA231_plate_97d | C3 | siRNA | 50 | nmol | MDAMB231 | 72 | 4 | MDA231_plate_97d | 97d | C3 | 27 | Homo sapiens | NCBITaxon | NCBITaxon_9606 | MDAMB231 | EFO | EFO_0001209 | smartpool | GPBAR1 | 151306 | NM_170699 | 116284380 | D-005519-01 | D-005519-03 | D-005519-04 | D-005519-18 | ./Validation PKT screen MDA-MB-231/MDA231 hits validation set2/MDA231_plate_97d | |||||
| MDA231_plate_97d | C4 | siRNA | 50 | nmol | MDAMB231 | 72 | 4 | MDA231_plate_97d | 97d | C4 | 28 | Homo sapiens | NCBITaxon | NCBITaxon_9606 | MDAMB231 | EFO | EFO_0001209 | single | IQGAP1 | 8826 | NM_003870 | 57242794 | D-004694-01 | ./Validation PKT screen MDA-MB-231/MDA231 hits validation set2/MDA231_plate_97d | ||||||||
| MDA231_plate_97d | C5 | siRNA | 50 | nmol | MDAMB231 | 72 | 4 | MDA231_plate_97d | 97d | C5 | 29 | Homo sapiens | NCBITaxon | NCBITaxon_9606 | MDAMB231 | EFO | EFO_0001209 | single | PTPRJ | 5795 | NM_001098503 | 148728159 | D-008476-19 | ./Validation PKT screen MDA-MB-231/MDA231 hits validation set2/MDA231_plate_97d | ||||||||
| MDA231_plate_97d | C6 | siRNA | 50 | nmol | MDAMB231 | 72 | 4 | MDA231_plate_97d | 97d | C6 | 30 | Homo sapiens | NCBITaxon | NCBITaxon_9606 | MDAMB231 | EFO | EFO_0001209 | single | TLR1 | 7096 | NM_003263 | 41350336 | D-008086-03 | ./Validation PKT screen MDA-MB-231/MDA231 hits validation set2/MDA231_plate_97d | ||||||||
| MDA231_plate_97d | C7 | siRNA | 50 | nmol | MDAMB231 | 72 | 4 | MDA231_plate_97d | 97d | C7 | 31 | Homo sapiens | NCBITaxon | NCBITaxon_9606 | MDAMB231 | EFO | EFO_0001209 | smartpool | AP1G1 | 164 | NM_001128 | 71772941 | D-019183-01 | D-019183-03 | D-019183-18 | D-019183-17 | ./Validation PKT screen MDA-MB-231/MDA231 hits validation set2/MDA231_plate_97d | |||||
| MDA231_plate_97d | C8 | siRNA | 50 | nmol | MDAMB231 | 72 | 4 | MDA231_plate_97d | 97d | C8 | 32 | Homo sapiens | NCBITaxon | NCBITaxon_9606 | MDAMB231 | EFO | EFO_0001209 | single | PTPRJ | 5795 | NM_001098503 | 148728159 | D-008476-21 | ./Validation PKT screen MDA-MB-231/MDA231 hits validation set2/MDA231_plate_97d | ||||||||
| MDA231_plate_97d | C9 | siRNA | 50 | nmol | MDAMB231 | 72 | 4 | MDA231_plate_97d | 97d | C9 | 33 | Homo sapiens | NCBITaxon | NCBITaxon_9606 | MDAMB231 | EFO | EFO_0001209 | single | GPR20 | 2843 | NM_005293 | 89257345 | D-005555-03 | ./Validation PKT screen MDA-MB-231/MDA231 hits validation set2/MDA231_plate_97d | ||||||||
| MDA231_plate_97d | D1 | siRNA | 50 | nmol | MDAMB231 | 72 | 126 | MDA231_plate_97d | 97d | D1 | 37 | Homo sapiens | NCBITaxon | NCBITaxon_9606 | MDAMB231 | EFO | EFO_0001209 | smartpool | ILK | 3611 | NM_001014794 | 62420872 | M-004499-00 | ./Validation PKT screen MDA-MB-231/MDA231 hits validation set2/MDA231_plate_97d | ||||||||
| MDA231_plate_97d | D10 | siRNA | 50 | nmol | MDAMB231 | 72 | 4 | MDA231_plate_97d | 97d | D10 | 46 | Homo sapiens | NCBITaxon | NCBITaxon_9606 | MDAMB231 | EFO | EFO_0001209 | single | CYSLTR1 | 10800 | NM_006639 | 29029598 | D-005475-19 | ./Validation PKT screen MDA-MB-231/MDA231 hits validation set2/MDA231_plate_97d | ||||||||
| MDA231_plate_97d | D11 | siRNA | 50 | nmol | MDAMB231 | 72 | 4 | MDA231_plate_97d | 97d | D11 | 47 | Homo sapiens | NCBITaxon | NCBITaxon_9606 | MDAMB231 | EFO | EFO_0001209 | single | PVRL3 | 25945 | NM_015480 | 11386198 | D-013952-04 | ./Validation PKT screen MDA-MB-231/MDA231 hits validation set2/MDA231_plate_97d | ||||||||
| MDA231_plate_97d | D12 | siRNA | 50 | nmol | MDAMB231 | 72 | 191 | MDA231_plate_97d | 97d | D12 | 48 | Homo sapiens | NCBITaxon | NCBITaxon_9606 | MDAMB231 | EFO | EFO_0001209 | mock | Negative | ./Validation PKT screen MDA-MB-231/MDA231 hits validation set2/MDA231_plate_97d | ||||||||||||
| MDA231_plate_97d | D2 | siRNA | 50 | nmol | MDAMB231 | 72 | 4 | MDA231_plate_97d | 97d | D2 | 38 | Homo sapiens | NCBITaxon | NCBITaxon_9606 | MDAMB231 | EFO | EFO_0001209 | smartpool | CYSLTR1 | 10800 | NM_006639 | 29029598 | D-005475-01 | D-005475-03 | D-005475-05 | D-005475-19 | ./Validation PKT screen MDA-MB-231/MDA231 hits validation set2/MDA231_plate_97d | |||||
| MDA231_plate_97d | D3 | siRNA | 50 | nmol | MDAMB231 | 72 | 4 | MDA231_plate_97d | 97d | D3 | 39 | Homo sapiens | NCBITaxon | NCBITaxon_9606 | MDAMB231 | EFO | EFO_0001209 | single | AP1G1 | 164 | NM_001128 | 71772941 | D-019183-03 | ./Validation PKT screen MDA-MB-231/MDA231 hits validation set2/MDA231_plate_97d | ||||||||
| MDA231_plate_97d | D4 | siRNA | 50 | nmol | MDAMB231 | 72 | 4 | MDA231_plate_97d | 97d | D4 | 40 | Homo sapiens | NCBITaxon | NCBITaxon_9606 | MDAMB231 | EFO | EFO_0001209 | single | GPBAR1 | 151306 | NM_170699 | 116284380 | D-005519-01 | ./Validation PKT screen MDA-MB-231/MDA231 hits validation set2/MDA231_plate_97d | ||||||||
| MDA231_plate_97d | D5 | siRNA | 50 | nmol | MDAMB231 | 72 | 4 | MDA231_plate_97d | 97d | D5 | 41 | Homo sapiens | NCBITaxon | NCBITaxon_9606 | MDAMB231 | EFO | EFO_0001209 | single | ZNF483 | 158399 | XM_088567 | 55741869 | D-026189-18 | ./Validation PKT screen MDA-MB-231/MDA231 hits validation set2/MDA231_plate_97d | ||||||||
| MDA231_plate_97d | D6 | siRNA | 50 | nmol | MDAMB231 | 72 | 4 | MDA231_plate_97d | 97d | D6 | 42 | Homo sapiens | NCBITaxon | NCBITaxon_9606 | MDAMB231 | EFO | EFO_0001209 | single | VCL | 7414 | NM_003373 | 50593538 | D-009288-03 | ./Validation PKT screen MDA-MB-231/MDA231 hits validation set2/MDA231_plate_97d | ||||||||
| MDA231_plate_97d | D7 | siRNA | 50 | nmol | MDAMB231 | 72 | 4 | MDA231_plate_97d | 97d | D7 | 43 | Homo sapiens | NCBITaxon | NCBITaxon_9606 | MDAMB231 | EFO | EFO_0001209 | single | PTPNS1 | 140885 | NM_080792 | 91105786 | D-013223-04 | ./Validation PKT screen MDA-MB-231/MDA231 hits validation set2/MDA231_plate_97d | ||||||||
| MDA231_plate_97d | D8 | siRNA | 50 | nmol | MDAMB231 | 72 | 4 | MDA231_plate_97d | 97d | D8 | 44 | Homo sapiens | NCBITaxon | NCBITaxon_9606 | MDAMB231 | EFO | EFO_0001209 | smartpool | PTPRJ | 5795 | NM_001098503 | 148728159 | D-008476-06 | D-008476-19 | D-008476-20 | D-008476-21 | ./Validation PKT screen MDA-MB-231/MDA231 hits validation set2/MDA231_plate_97d | |||||
| MDA231_plate_97d | D9 | siRNA | 50 | nmol | MDAMB231 | 72 | 4 | MDA231_plate_97d | 97d | D9 | 45 | Homo sapiens | NCBITaxon | NCBITaxon_9606 | MDAMB231 | EFO | EFO_0001209 | smartpool | TLR1 | 7096 | NM_003263 | 41350336 | D-008086-01 | D-008086-03 | D-008086-04 | D-008086-17 | ./Validation PKT screen MDA-MB-231/MDA231 hits validation set2/MDA231_plate_97d | |||||
| MDA231_plate_97d | E1 | siRNA | 50 | nmol | MDAMB231 | 72 | 192 | MDA231_plate_97d | 97d | E1 | 49 | Homo sapiens | NCBITaxon | NCBITaxon_9606 | MDAMB231 | EFO | EFO_0001209 | mock | Negative | ./Validation PKT screen MDA-MB-231/MDA231 hits validation set2/MDA231_plate_97d | ||||||||||||
| MDA231_plate_97d | E10 | siRNA | 50 | nmol | MDAMB231 | 72 | 4 | MDA231_plate_97d | 97d | E10 | 58 | Homo sapiens | NCBITaxon | NCBITaxon_9606 | MDAMB231 | EFO | EFO_0001209 | single | PVRL3 | 25945 | NM_015480 | 11386198 | D-013952-05 | ./Validation PKT screen MDA-MB-231/MDA231 hits validation set2/MDA231_plate_97d | ||||||||
| MDA231_plate_97d | E11 | siRNA | 50 | nmol | MDAMB231 | 72 | 4 | MDA231_plate_97d | 97d | E11 | 59 | Homo sapiens | NCBITaxon | NCBITaxon_9606 | MDAMB231 | EFO | EFO_0001209 | single | CYSLTR1 | 10800 | NM_006639 | 29029598 | D-005475-03 | ./Validation PKT screen MDA-MB-231/MDA231 hits validation set2/MDA231_plate_97d | ||||||||
| MDA231_plate_97d | E12 | siRNA | 50 | nmol | MDAMB231 | 72 | 127 | MDA231_plate_97d | 97d | E12 | 60 | Homo sapiens | NCBITaxon | NCBITaxon_9606 | MDAMB231 | EFO | EFO_0001209 | smartpool | ILK | 3611 | NM_001014794 | 62420872 | M-004499-00 | ./Validation PKT screen MDA-MB-231/MDA231 hits validation set2/MDA231_plate_97d | ||||||||
| MDA231_plate_97d | E2 | siRNA | 50 | nmol | MDAMB231 | 72 | 4 | MDA231_plate_97d | 97d | E2 | 50 | Homo sapiens | NCBITaxon | NCBITaxon_9606 | MDAMB231 | EFO | EFO_0001209 | single | PTPN6 | 5777 | NM_080548 | 94557302 | D-009778-04 | ./Validation PKT screen MDA-MB-231/MDA231 hits validation set2/MDA231_plate_97d | ||||||||
| MDA231_plate_97d | E3 | siRNA | 50 | nmol | MDAMB231 | 72 | 4 | MDA231_plate_97d | 97d | E3 | 51 | Homo sapiens | NCBITaxon | NCBITaxon_9606 | MDAMB231 | EFO | EFO_0001209 | smartpool | EMR3 | 84658 | NM_032571 | 133930785 | D-005489-01 | D-005489-02 | D-005489-03 | D-005489-05 | ./Validation PKT screen MDA-MB-231/MDA231 hits validation set2/MDA231_plate_97d | |||||
| MDA231_plate_97d | E4 | siRNA | 50 | nmol | MDAMB231 | 72 | 4 | MDA231_plate_97d | 97d | E4 | 52 | Homo sapiens | NCBITaxon | NCBITaxon_9606 | MDAMB231 | EFO | EFO_0001209 | single | TLR1 | 7096 | NM_003263 | 41350336 | D-008086-01 | ./Validation PKT screen MDA-MB-231/MDA231 hits validation set2/MDA231_plate_97d | ||||||||
| MDA231_plate_97d | E5 | siRNA | 50 | nmol | MDAMB231 | 72 | 4 | MDA231_plate_97d | 97d | E5 | 53 | Homo sapiens | NCBITaxon | NCBITaxon_9606 | MDAMB231 | EFO | EFO_0001209 | single | EMR3 | 84658 | NM_032571 | 133930785 | D-005489-01 | ./Validation PKT screen MDA-MB-231/MDA231 hits validation set2/MDA231_plate_97d | ||||||||
| MDA231_plate_97d | E6 | siRNA | 50 | nmol | MDAMB231 | 72 | 4 | MDA231_plate_97d | 97d | E6 | 54 | Homo sapiens | NCBITaxon | NCBITaxon_9606 | MDAMB231 | EFO | EFO_0001209 | single | IQGAP1 | 8826 | NM_003870 | 57242794 | D-004694-03 | ./Validation PKT screen MDA-MB-231/MDA231 hits validation set2/MDA231_plate_97d | ||||||||
| MDA231_plate_97d | E7 | siRNA | 50 | nmol | MDAMB231 | 72 | 4 | MDA231_plate_97d | 97d | E7 | 55 | Homo sapiens | NCBITaxon | NCBITaxon_9606 | MDAMB231 | EFO | EFO_0001209 | single | PTPN6 | 5777 | NM_080548 | 94557302 | D-009778-02 | ./Validation PKT screen MDA-MB-231/MDA231 hits validation set2/MDA231_plate_97d | ||||||||
| MDA231_plate_97d | E8 | siRNA | 50 | nmol | MDAMB231 | 72 | 4 | MDA231_plate_97d | 97d | E8 | 56 | Homo sapiens | NCBITaxon | NCBITaxon_9606 | MDAMB231 | EFO | EFO_0001209 | single | DUSP11 | 8446 | NM_003584 | 4503414 | D-007885-04 | ./Validation PKT screen MDA-MB-231/MDA231 hits validation set2/MDA231_plate_97d | ||||||||
| MDA231_plate_97d | E9 | siRNA | 50 | nmol | MDAMB231 | 72 | 4 | MDA231_plate_97d | 97d | E9 | 57 | Homo sapiens | NCBITaxon | NCBITaxon_9606 | MDAMB231 | EFO | EFO_0001209 | smartpool | DUSP11 | 8446 | NM_003584 | 4503414 | D-007885-01 | D-007885-02 | D-007885-03 | D-007885-04 | ./Validation PKT screen MDA-MB-231/MDA231 hits validation set2/MDA231_plate_97d | |||||
| MDA231_plate_97d | F1 | siRNA | 50 | nmol | MDAMB231 | 72 | 127 | MDA231_plate_97d | 97d | F1 | 61 | Homo sapiens | NCBITaxon | NCBITaxon_9606 | MDAMB231 | EFO | EFO_0001209 | smartpool | DNM2 | 1785 | NM_004945 | 56549118 | Positive | M-004007-01 | ./Validation PKT screen MDA-MB-231/MDA231 hits validation set2/MDA231_plate_97d | |||||||
| MDA231_plate_97d | F10 | siRNA | 50 | nmol | MDAMB231 | 72 | 4 | MDA231_plate_97d | 97d | F10 | 70 | Homo sapiens | NCBITaxon | NCBITaxon_9606 | MDAMB231 | EFO | EFO_0001209 | smartpool | PTPN6 | 5777 | NM_080548 | 94557302 | D-009778-01 | D-009778-02 | D-009778-03 | D-009778-04 | ./Validation PKT screen MDA-MB-231/MDA231 hits validation set2/MDA231_plate_97d | |||||
| MDA231_plate_97d | F11 | siRNA | 50 | nmol | MDAMB231 | 72 | 4 | MDA231_plate_97d | 97d | F11 | 71 | Homo sapiens | NCBITaxon | NCBITaxon_9606 | MDAMB231 | EFO | EFO_0001209 | single | LGALS1 | 3956 | NM_002305 | 85815826 | D-011718-03 | ./Validation PKT screen MDA-MB-231/MDA231 hits validation set2/MDA231_plate_97d | ||||||||
| MDA231_plate_97d | F12 | siRNA | 50 | nmol | MDAMB231 | 72 | 128 | MDA231_plate_97d | 97d | F12 | 72 | Homo sapiens | NCBITaxon | NCBITaxon_9606 | MDAMB231 | EFO | EFO_0001209 | smartpool | DNM2 | 1785 | NM_004945 | 56549118 | Positive | M-004007-01 | ./Validation PKT screen MDA-MB-231/MDA231 hits validation set2/MDA231_plate_97d | |||||||
| MDA231_plate_97d | F2 | siRNA | 50 | nmol | MDAMB231 | 72 | 4 | MDA231_plate_97d | 97d | F2 | 62 | Homo sapiens | NCBITaxon | NCBITaxon_9606 | MDAMB231 | EFO | EFO_0001209 | single | NCK2 | 8440 | NM_001004722 | 52630426 | D-019547-17 | ./Validation PKT screen MDA-MB-231/MDA231 hits validation set2/MDA231_plate_97d | ||||||||
| MDA231_plate_97d | F3 | siRNA | 50 | nmol | MDAMB231 | 72 | 4 | MDA231_plate_97d | 97d | F3 | 63 | Homo sapiens | NCBITaxon | NCBITaxon_9606 | MDAMB231 | EFO | EFO_0001209 | smartpool | IQGAP1 | 8826 | NM_003870 | 57242794 | D-004694-01 | D-004694-03 | D-004694-04 | D-004694-05 | ./Validation PKT screen MDA-MB-231/MDA231 hits validation set2/MDA231_plate_97d | |||||
| MDA231_plate_97d | F4 | siRNA | 50 | nmol | MDAMB231 | 72 | 4 | MDA231_plate_97d | 97d | F4 | 64 | Homo sapiens | NCBITaxon | NCBITaxon_9606 | MDAMB231 | EFO | EFO_0001209 | smartpool | GPR20 | 2843 | NM_005293 | 89257345 | D-005555-02 | D-005555-03 | D-005555-04 | D-005555-05 | ./Validation PKT screen MDA-MB-231/MDA231 hits validation set2/MDA231_plate_97d | |||||
| MDA231_plate_97d | F5 | siRNA | 50 | nmol | MDAMB231 | 72 | 4 | MDA231_plate_97d | 97d | F5 | 65 | Homo sapiens | NCBITaxon | NCBITaxon_9606 | MDAMB231 | EFO | EFO_0001209 | single | AP1G1 | 164 | NM_001128 | 71772941 | D-019183-01 | ./Validation PKT screen MDA-MB-231/MDA231 hits validation set2/MDA231_plate_97d | ||||||||
| MDA231_plate_97d | F6 | siRNA | 50 | nmol | MDAMB231 | 72 | 4 | MDA231_plate_97d | 97d | F6 | 66 | Homo sapiens | NCBITaxon | NCBITaxon_9606 | MDAMB231 | EFO | EFO_0001209 | single | NCK2 | 8440 | NM_001004722 | 52630426 | D-019547-01 | ./Validation PKT screen MDA-MB-231/MDA231 hits validation set2/MDA231_plate_97d | ||||||||
| MDA231_plate_97d | F7 | siRNA | 50 | nmol | MDAMB231 | 72 | 4 | MDA231_plate_97d | 97d | F7 | 67 | Homo sapiens | NCBITaxon | NCBITaxon_9606 | MDAMB231 | EFO | EFO_0001209 | single | ZNF483 | 158399 | XM_088567 | 55741869 | D-026189-19 | ./Validation PKT screen MDA-MB-231/MDA231 hits validation set2/MDA231_plate_97d | ||||||||
| MDA231_plate_97d | F8 | siRNA | 50 | nmol | MDAMB231 | 72 | 4 | MDA231_plate_97d | 97d | F8 | 68 | Homo sapiens | NCBITaxon | NCBITaxon_9606 | MDAMB231 | EFO | EFO_0001209 | single | DUSP11 | 8446 | NM_003584 | 4503414 | D-007885-02 | ./Validation PKT screen MDA-MB-231/MDA231 hits validation set2/MDA231_plate_97d | ||||||||
| MDA231_plate_97d | F9 | siRNA | 50 | nmol | MDAMB231 | 72 | 4 | MDA231_plate_97d | 97d | F9 | 69 | Homo sapiens | NCBITaxon | NCBITaxon_9606 | MDAMB231 | EFO | EFO_0001209 | smartpool | PVRL3 | 25945 | NM_015480 | 11386198 | D-013952-02 | D-013952-03 | D-013952-04 | D-013952-05 | ./Validation PKT screen MDA-MB-231/MDA231 hits validation set2/MDA231_plate_97d | |||||
| MDA231_plate_97d | G1 | siRNA | 50 | nmol | MDAMB231 | 72 | 193 | MDA231_plate_97d | 97d | G1 | 73 | Homo sapiens | NCBITaxon | NCBITaxon_9606 | MDAMB231 | EFO | EFO_0001209 | mock | Negative | ./Validation PKT screen MDA-MB-231/MDA231 hits validation set2/MDA231_plate_97d | ||||||||||||
| MDA231_plate_97d | G10 | siRNA | 50 | nmol | MDAMB231 | 72 | 4 | MDA231_plate_97d | 97d | G10 | 82 | Homo sapiens | NCBITaxon | NCBITaxon_9606 | MDAMB231 | EFO | EFO_0001209 | single | LGALS1 | 3956 | NM_002305 | 85815826 | D-011718-01 | ./Validation PKT screen MDA-MB-231/MDA231 hits validation set2/MDA231_plate_97d | ||||||||
| MDA231_plate_97d | G11 | siRNA | 50 | nmol | MDAMB231 | 72 | 4 | MDA231_plate_97d | 97d | G11 | 83 | Homo sapiens | NCBITaxon | NCBITaxon_9606 | MDAMB231 | EFO | EFO_0001209 | single | PTPN6 | 5777 | NM_080548 | 94557302 | D-009778-01 | ./Validation PKT screen MDA-MB-231/MDA231 hits validation set2/MDA231_plate_97d | ||||||||
| MDA231_plate_97d | G12 | siRNA | 50 | nmol | MDAMB231 | 72 | 194 | MDA231_plate_97d | 97d | G12 | 84 | Homo sapiens | NCBITaxon | NCBITaxon_9606 | MDAMB231 | EFO | EFO_0001209 | mock | Negative | ./Validation PKT screen MDA-MB-231/MDA231 hits validation set2/MDA231_plate_97d | ||||||||||||
| MDA231_plate_97d | G2 | siRNA | 50 | nmol | MDAMB231 | 72 | 4 | MDA231_plate_97d | 97d | G2 | 74 | Homo sapiens | NCBITaxon | NCBITaxon_9606 | MDAMB231 | EFO | EFO_0001209 | single | IQGAP1 | 8826 | NM_003870 | 57242794 | D-004694-05 | ./Validation PKT screen MDA-MB-231/MDA231 hits validation set2/MDA231_plate_97d | ||||||||
| MDA231_plate_97d | G3 | siRNA | 50 | nmol | MDAMB231 | 72 | 4 | MDA231_plate_97d | 97d | G3 | 75 | Homo sapiens | NCBITaxon | NCBITaxon_9606 | MDAMB231 | EFO | EFO_0001209 | single | GPR20 | 2843 | NM_005293 | 89257345 | D-005555-02 | ./Validation PKT screen MDA-MB-231/MDA231 hits validation set2/MDA231_plate_97d | ||||||||
| MDA231_plate_97d | G4 | siRNA | 50 | nmol | MDAMB231 | 72 | 4 | MDA231_plate_97d | 97d | G4 | 76 | Homo sapiens | NCBITaxon | NCBITaxon_9606 | MDAMB231 | EFO | EFO_0001209 | smartpool | LGALS1 | 3956 | NM_002305 | 85815826 | D-011718-01 | D-011718-02 | D-011718-03 | D-011718-04 | ./Validation PKT screen MDA-MB-231/MDA231 hits validation set2/MDA231_plate_97d | |||||
| MDA231_plate_97d | G5 | siRNA | 50 | nmol | MDAMB231 | 72 | 4 | MDA231_plate_97d | 97d | G5 | 77 | Homo sapiens | NCBITaxon | NCBITaxon_9606 | MDAMB231 | EFO | EFO_0001209 | single | EMR3 | 84658 | NM_032571 | 133930785 | D-005489-05 | ./Validation PKT screen MDA-MB-231/MDA231 hits validation set2/MDA231_plate_97d | ||||||||
| MDA231_plate_97d | G6 | siRNA | 50 | nmol | MDAMB231 | 72 | 4 | MDA231_plate_97d | 97d | G6 | 78 | Homo sapiens | NCBITaxon | NCBITaxon_9606 | MDAMB231 | EFO | EFO_0001209 | single | AP1G1 | 164 | NM_001128 | 71772941 | D-019183-18 | ./Validation PKT screen MDA-MB-231/MDA231 hits validation set2/MDA231_plate_97d | ||||||||
| MDA231_plate_97d | G7 | siRNA | 50 | nmol | MDAMB231 | 72 | 4 | MDA231_plate_97d | 97d | G7 | 79 | Homo sapiens | NCBITaxon | NCBITaxon_9606 | MDAMB231 | EFO | EFO_0001209 | single | GPR20 | 2843 | NM_005293 | 89257345 | D-005555-05 | ./Validation PKT screen MDA-MB-231/MDA231 hits validation set2/MDA231_plate_97d | ||||||||
| MDA231_plate_97d | G8 | siRNA | 50 | nmol | MDAMB231 | 72 | 4 | MDA231_plate_97d | 97d | G8 | 80 | Homo sapiens | NCBITaxon | NCBITaxon_9606 | MDAMB231 | EFO | EFO_0001209 | smartpool | ZNF483 | 158399 | XM_088567 | 55741869 | D-026189-03 | D-026189-17 | D-026189-18 | D-026189-19 | ./Validation PKT screen MDA-MB-231/MDA231 hits validation set2/MDA231_plate_97d | |||||
| MDA231_plate_97d | G9 | siRNA | 50 | nmol | MDAMB231 | 72 | 4 | MDA231_plate_97d | 97d | G9 | 81 | Homo sapiens | NCBITaxon | NCBITaxon_9606 | MDAMB231 | EFO | EFO_0001209 | single | DUSP11 | 8446 | NM_003584 | 4503414 | D-007885-01 | ./Validation PKT screen MDA-MB-231/MDA231 hits validation set2/MDA231_plate_97d | ||||||||
| MDA231_plate_97d | H1 | siRNA | 50 | nmol | MDAMB231 | 72 | 128 | MDA231_plate_97d | 97d | H1 | 85 | Homo sapiens | NCBITaxon | NCBITaxon_9606 | MDAMB231 | EFO | EFO_0001209 | smartpool | ILK | 3611 | NM_001014794 | 62420872 | M-004499-00 | ./Validation PKT screen MDA-MB-231/MDA231 hits validation set2/MDA231_plate_97d | ||||||||
| MDA231_plate_97d | H10 | siRNA | 50 | nmol | MDAMB231 | 72 | 4 | MDA231_plate_97d | 97d | H10 | 94 | Homo sapiens | NCBITaxon | NCBITaxon_9606 | MDAMB231 | EFO | EFO_0001209 | single | PTPRJ | 5795 | NM_001098503 | 148728159 | D-008476-06 | ./Validation PKT screen MDA-MB-231/MDA231 hits validation set2/MDA231_plate_97d | ||||||||
| MDA231_plate_97d | H11 | siRNA | 50 | nmol | MDAMB231 | 72 | 4 | MDA231_plate_97d | 97d | H11 | 95 | Homo sapiens | NCBITaxon | NCBITaxon_9606 | MDAMB231 | EFO | EFO_0001209 | single | LGALS1 | 3956 | NM_002305 | 85815826 | D-011718-02 | ./Validation PKT screen MDA-MB-231/MDA231 hits validation set2/MDA231_plate_97d | ||||||||
| MDA231_plate_97d | H12 | siRNA | 50 | nmol | MDAMB231 | 72 | 64 | MDA231_plate_97d | 97d | H12 | 96 | Homo sapiens | NCBITaxon | NCBITaxon_9606 | MDAMB231 | EFO | EFO_0001209 | GFP | P-002048-01 | D-001300-01 | ./Validation PKT screen MDA-MB-231/MDA231 hits validation set2/MDA231_plate_97d | |||||||||||
| MDA231_plate_97d | H2 | siRNA | 50 | nmol | MDAMB231 | 72 | 4 | MDA231_plate_97d | 97d | H2 | 86 | Homo sapiens | NCBITaxon | NCBITaxon_9606 | MDAMB231 | EFO | EFO_0001209 | single | NCK2 | 8440 | NM_001004722 | 52630426 | D-019547-04 | ./Validation PKT screen MDA-MB-231/MDA231 hits validation set2/MDA231_plate_97d | ||||||||
| MDA231_plate_97d | H3 | siRNA | 50 | nmol | MDAMB231 | 72 | 4 | MDA231_plate_97d | 97d | H3 | 87 | Homo sapiens | NCBITaxon | NCBITaxon_9606 | MDAMB231 | EFO | EFO_0001209 | single | VCL | 7414 | NM_003373 | 50593538 | D-009288-04 | ./Validation PKT screen MDA-MB-231/MDA231 hits validation set2/MDA231_plate_97d | ||||||||
| MDA231_plate_97d | H4 | siRNA | 50 | nmol | MDAMB231 | 72 | 4 | MDA231_plate_97d | 97d | H4 | 88 | Homo sapiens | NCBITaxon | NCBITaxon_9606 | MDAMB231 | EFO | EFO_0001209 | smartpool | NCK2 | 8440 | NM_001004722 | 52630426 | D-019547-01 | D-019547-04 | D-019547-17 | D-019547-18 | ./Validation PKT screen MDA-MB-231/MDA231 hits validation set2/MDA231_plate_97d | |||||
| MDA231_plate_97d | H5 | siRNA | 50 | nmol | MDAMB231 | 72 | 4 | MDA231_plate_97d | 97d | H5 | 89 | Homo sapiens | NCBITaxon | NCBITaxon_9606 | MDAMB231 | EFO | EFO_0001209 | single | PTPRJ | 5795 | NM_001098503 | 148728159 | D-008476-20 | ./Validation PKT screen MDA-MB-231/MDA231 hits validation set2/MDA231_plate_97d | ||||||||
| MDA231_plate_97d | H6 | siRNA | 50 | nmol | MDAMB231 | 72 | 4 | MDA231_plate_97d | 97d | H6 | 90 | Homo sapiens | NCBITaxon | NCBITaxon_9606 | MDAMB231 | EFO | EFO_0001209 | single | GPBAR1 | 151306 | NM_170699 | 116284380 | D-005519-18 | ./Validation PKT screen MDA-MB-231/MDA231 hits validation set2/MDA231_plate_97d | ||||||||
| MDA231_plate_97d | H7 | siRNA | 50 | nmol | MDAMB231 | 72 | 4 | MDA231_plate_97d | 97d | H7 | 91 | Homo sapiens | NCBITaxon | NCBITaxon_9606 | MDAMB231 | EFO | EFO_0001209 | single | AP1G1 | 164 | NM_001128 | 71772941 | D-019183-17 | ./Validation PKT screen MDA-MB-231/MDA231 hits validation set2/MDA231_plate_97d | ||||||||
| MDA231_plate_97d | H8 | siRNA | 50 | nmol | MDAMB231 | 72 | 4 | MDA231_plate_97d | 97d | H8 | 92 | Homo sapiens | NCBITaxon | NCBITaxon_9606 | MDAMB231 | EFO | EFO_0001209 | single | CYSLTR1 | 10800 | NM_006639 | 29029598 | D-005475-01 | ./Validation PKT screen MDA-MB-231/MDA231 hits validation set2/MDA231_plate_97d | ||||||||
| MDA231_plate_97d | H9 | siRNA | 50 | nmol | MDAMB231 | 72 | 4 | MDA231_plate_97d | 97d | H9 | 93 | Homo sapiens | NCBITaxon | NCBITaxon_9606 | MDAMB231 | EFO | EFO_0001209 | single | IQGAP1 | 8826 | NM_003870 | 57242794 | D-004694-04 | ./Validation PKT screen MDA-MB-231/MDA231 hits validation set2/MDA231_plate_97d | ||||||||
| MDA231_plate_98a | A1 | siRNA | 50 | nmol | MDAMB231 | 72 | 65 | MDA231_plate_98a | 98a | A1 | 1 | Homo sapiens | NCBITaxon | NCBITaxon_9606 | MDAMB231 | EFO | EFO_0001209 | GFP | P-002048-01 | D-001300-01 | ./Validation PKT screen MDA-MB-231/MDA231 hits validation set2/MDA231_plate_98a | |||||||||||
| MDA231_plate_98a | A10 | siRNA | 50 | nmol | MDAMB231 | 72 | 1 | MDA231_plate_98a | 98a | A10 | 10 | Homo sapiens | NCBITaxon | NCBITaxon_9606 | MDAMB231 | EFO | EFO_0001209 | single | STK22B | 23617 | NM_053006 | 34222349 | D-005379-02 | ./Validation PKT screen MDA-MB-231/MDA231 hits validation set2/MDA231_plate_98a | ||||||||
| MDA231_plate_98a | A11 | siRNA | 50 | nmol | MDAMB231 | 72 | 1 | MDA231_plate_98a | 98a | A11 | 11 | Homo sapiens | NCBITaxon | NCBITaxon_9606 | MDAMB231 | EFO | EFO_0001209 | single | PPP2R5D | 5528 | NM_006245 | 31083266 | D-009799-04 | ./Validation PKT screen MDA-MB-231/MDA231 hits validation set2/MDA231_plate_98a | ||||||||
| MDA231_plate_98a | A12 | siRNA | 50 | nmol | MDAMB231 | 72 | 129 | MDA231_plate_98a | 98a | A12 | 12 | Homo sapiens | NCBITaxon | NCBITaxon_9606 | MDAMB231 | EFO | EFO_0001209 | smartpool | ILK | 3611 | NM_001014794 | 62420872 | M-004499-00 | ./Validation PKT screen MDA-MB-231/MDA231 hits validation set2/MDA231_plate_98a | ||||||||
| MDA231_plate_98a | A2 | siRNA | 50 | nmol | MDAMB231 | 72 | 1 | MDA231_plate_98a | 98a | A2 | 2 | Homo sapiens | NCBITaxon | NCBITaxon_9606 | MDAMB231 | EFO | EFO_0001209 | smartpool | OPN1SW | 611 | NM_001708 | 4502386 | D-005680-01 | D-005680-02 | D-005680-03 | D-005680-04 | ./Validation PKT screen MDA-MB-231/MDA231 hits validation set2/MDA231_plate_98a | |||||
| MDA231_plate_98a | A3 | siRNA | 50 | nmol | MDAMB231 | 72 | 1 | MDA231_plate_98a | 98a | A3 | 3 | Homo sapiens | NCBITaxon | NCBITaxon_9606 | MDAMB231 | EFO | EFO_0001209 | single | PHF17 | 79960 | NM_024900 | 111154093 | D-017133-03 | ./Validation PKT screen MDA-MB-231/MDA231 hits validation set2/MDA231_plate_98a | ||||||||
| MDA231_plate_98a | A4 | siRNA | 50 | nmol | MDAMB231 | 72 | 1 | MDA231_plate_98a | 98a | A4 | 4 | Homo sapiens | NCBITaxon | NCBITaxon_9606 | MDAMB231 | EFO | EFO_0001209 | single | HRAS | 3265 | NM_005343 | 4885424 | D-004142-03 | ./Validation PKT screen MDA-MB-231/MDA231 hits validation set2/MDA231_plate_98a | ||||||||
| MDA231_plate_98a | A5 | siRNA | 50 | nmol | MDAMB231 | 72 | 1 | MDA231_plate_98a | 98a | A5 | 5 | Homo sapiens | NCBITaxon | NCBITaxon_9606 | MDAMB231 | EFO | EFO_0001209 | single | KEAP1 | 9817 | NM_012289 | 22027641 | D-012453-01 | ./Validation PKT screen MDA-MB-231/MDA231 hits validation set2/MDA231_plate_98a | ||||||||
| MDA231_plate_98a | A6 | siRNA | 50 | nmol | MDAMB231 | 72 | 1 | MDA231_plate_98a | 98a | A6 | 6 | Homo sapiens | NCBITaxon | NCBITaxon_9606 | MDAMB231 | EFO | EFO_0001209 | single | PON2 | 5445 | NM_001018161 | 66529395 | D-009676-17 | ./Validation PKT screen MDA-MB-231/MDA231 hits validation set2/MDA231_plate_98a | ||||||||
| MDA231_plate_98a | A7 | siRNA | 50 | nmol | MDAMB231 | 72 | 1 | MDA231_plate_98a | 98a | A7 | 7 | Homo sapiens | NCBITaxon | NCBITaxon_9606 | MDAMB231 | EFO | EFO_0001209 | single | TIMP2 | 7077 | NM_003255 | 73858577 | D-011793-17 | ./Validation PKT screen MDA-MB-231/MDA231 hits validation set2/MDA231_plate_98a | ||||||||
| MDA231_plate_98a | A8 | siRNA | 50 | nmol | MDAMB231 | 72 | 1 | MDA231_plate_98a | 98a | A8 | 8 | Homo sapiens | NCBITaxon | NCBITaxon_9606 | MDAMB231 | EFO | EFO_0001209 | single | KEAP1 | 9817 | NM_012289 | 22027641 | D-012453-03 | ./Validation PKT screen MDA-MB-231/MDA231 hits validation set2/MDA231_plate_98a | ||||||||
| MDA231_plate_98a | A9 | siRNA | 50 | nmol | MDAMB231 | 72 | 1 | MDA231_plate_98a | 98a | A9 | 9 | Homo sapiens | NCBITaxon | NCBITaxon_9606 | MDAMB231 | EFO | EFO_0001209 | single | RHOG | 391 | NM_001665 | 4502218 | D-008995-02 | ./Validation PKT screen MDA-MB-231/MDA231 hits validation set2/MDA231_plate_98a | ||||||||
| MDA231_plate_98a | B1 | siRNA | 50 | nmol | MDAMB231 | 72 | 195 | MDA231_plate_98a | 98a | B1 | 13 | Homo sapiens | NCBITaxon | NCBITaxon_9606 | MDAMB231 | EFO | EFO_0001209 | mock | Negative | ./Validation PKT screen MDA-MB-231/MDA231 hits validation set2/MDA231_plate_98a | ||||||||||||
| MDA231_plate_98a | B10 | siRNA | 50 | nmol | MDAMB231 | 72 | 1 | MDA231_plate_98a | 98a | B10 | 22 | Homo sapiens | NCBITaxon | NCBITaxon_9606 | MDAMB231 | EFO | EFO_0001209 | single | PPP1R8 | 5511 | NM_014110 | 20336237 | D-010903-18 | ./Validation PKT screen MDA-MB-231/MDA231 hits validation set2/MDA231_plate_98a | ||||||||
| MDA231_plate_98a | B11 | siRNA | 50 | nmol | MDAMB231 | 72 | 1 | MDA231_plate_98a | 98a | B11 | 23 | Homo sapiens | NCBITaxon | NCBITaxon_9606 | MDAMB231 | EFO | EFO_0001209 | single | KEAP1 | 9817 | NM_012289 | 22027641 | D-012453-02 | ./Validation PKT screen MDA-MB-231/MDA231 hits validation set2/MDA231_plate_98a | ||||||||
| MDA231_plate_98a | B12 | siRNA | 50 | nmol | MDAMB231 | 72 | 196 | MDA231_plate_98a | 98a | B12 | 24 | Homo sapiens | NCBITaxon | NCBITaxon_9606 | MDAMB231 | EFO | EFO_0001209 | mock | Negative | ./Validation PKT screen MDA-MB-231/MDA231 hits validation set2/MDA231_plate_98a | ||||||||||||
| MDA231_plate_98a | B2 | siRNA | 50 | nmol | MDAMB231 | 72 | 1 | MDA231_plate_98a | 98a | B2 | 14 | Homo sapiens | NCBITaxon | NCBITaxon_9606 | MDAMB231 | EFO | EFO_0001209 | smartpool | CREBZF | 58487 | NM_021212 | 88900494 | D-013938-03 | D-013938-04 | D-013938-17 | D-013938-18 | ./Validation PKT screen MDA-MB-231/MDA231 hits validation set2/MDA231_plate_98a | |||||
| MDA231_plate_98a | B3 | siRNA | 50 | nmol | MDAMB231 | 72 | 1 | MDA231_plate_98a | 98a | B3 | 15 | Homo sapiens | NCBITaxon | NCBITaxon_9606 | MDAMB231 | EFO | EFO_0001209 | single | OPN1SW | 611 | NM_001708 | 4502386 | D-005680-04 | ./Validation PKT screen MDA-MB-231/MDA231 hits validation set2/MDA231_plate_98a | ||||||||
| MDA231_plate_98a | B4 | siRNA | 50 | nmol | MDAMB231 | 72 | 1 | MDA231_plate_98a | 98a | B4 | 16 | Homo sapiens | NCBITaxon | NCBITaxon_9606 | MDAMB231 | EFO | EFO_0001209 | single | FASTK | 10922 | NM_006712 | 39995105 | D-005317-01 | ./Validation PKT screen MDA-MB-231/MDA231 hits validation set2/MDA231_plate_98a | ||||||||
| MDA231_plate_98a | B5 | siRNA | 50 | nmol | MDAMB231 | 72 | 1 | MDA231_plate_98a | 98a | B5 | 17 | Homo sapiens | NCBITaxon | NCBITaxon_9606 | MDAMB231 | EFO | EFO_0001209 | single | CREBZF | 58487 | NM_021212 | 88900494 | D-013938-18 | ./Validation PKT screen MDA-MB-231/MDA231 hits validation set2/MDA231_plate_98a | ||||||||
| MDA231_plate_98a | B6 | siRNA | 50 | nmol | MDAMB231 | 72 | 1 | MDA231_plate_98a | 98a | B6 | 18 | Homo sapiens | NCBITaxon | NCBITaxon_9606 | MDAMB231 | EFO | EFO_0001209 | single | PON2 | 5445 | NM_001018161 | 66529395 | D-009676-02 | ./Validation PKT screen MDA-MB-231/MDA231 hits validation set2/MDA231_plate_98a | ||||||||
| MDA231_plate_98a | B7 | siRNA | 50 | nmol | MDAMB231 | 72 | 1 | MDA231_plate_98a | 98a | B7 | 19 | Homo sapiens | NCBITaxon | NCBITaxon_9606 | MDAMB231 | EFO | EFO_0001209 | smartpool | RHOC | 389 | NM_001042679 | 111494250 | D-008555-01 | D-008555-02 | D-008555-03 | D-008555-04 | ./Validation PKT screen MDA-MB-231/MDA231 hits validation set2/MDA231_plate_98a | |||||
| MDA231_plate_98a | B8 | siRNA | 50 | nmol | MDAMB231 | 72 | 1 | MDA231_plate_98a | 98a | B8 | 20 | Homo sapiens | NCBITaxon | NCBITaxon_9606 | MDAMB231 | EFO | EFO_0001209 | single | MXD1 | 4084 | NM_002357 | 70167417 | D-009325-02 | ./Validation PKT screen MDA-MB-231/MDA231 hits validation set2/MDA231_plate_98a | ||||||||
| MDA231_plate_98a | B9 | siRNA | 50 | nmol | MDAMB231 | 72 | 1 | MDA231_plate_98a | 98a | B9 | 21 | Homo sapiens | NCBITaxon | NCBITaxon_9606 | MDAMB231 | EFO | EFO_0001209 | smartpool | ZNF446 | 55663 | NM_017908 | 142366514 | D-020365-01 | D-020365-03 | D-020365-04 | D-020365-17 | ./Validation PKT screen MDA-MB-231/MDA231 hits validation set2/MDA231_plate_98a | |||||
| MDA231_plate_98a | C1 | siRNA | 50 | nmol | MDAMB231 | 72 | 129 | MDA231_plate_98a | 98a | C1 | 25 | Homo sapiens | NCBITaxon | NCBITaxon_9606 | MDAMB231 | EFO | EFO_0001209 | smartpool | DNM2 | 1785 | NM_004945 | 56549118 | Positive | M-004007-01 | ./Validation PKT screen MDA-MB-231/MDA231 hits validation set2/MDA231_plate_98a | |||||||
| MDA231_plate_98a | C10 | siRNA | 50 | nmol | MDAMB231 | 72 | 1 | MDA231_plate_98a | 98a | C10 | 34 | Homo sapiens | NCBITaxon | NCBITaxon_9606 | MDAMB231 | EFO | EFO_0001209 | single | ZNF446 | 55663 | NM_017908 | 142366514 | D-020365-17 | ./Validation PKT screen MDA-MB-231/MDA231 hits validation set2/MDA231_plate_98a | ||||||||
| MDA231_plate_98a | C11 | siRNA | 50 | nmol | MDAMB231 | 72 | 1 | MDA231_plate_98a | 98a | C11 | 35 | Homo sapiens | NCBITaxon | NCBITaxon_9606 | MDAMB231 | EFO | EFO_0001209 | smartpool | PPP1R8 | 5511 | NM_014110 | 20336237 | D-010903-02 | D-010903-17 | D-010903-18 | D-010903-19 | ./Validation PKT screen MDA-MB-231/MDA231 hits validation set2/MDA231_plate_98a |
