Selected Cell
Cell:
Value:
Nuclear proteins
MBNP_Histones
DNA replication
DNA repair
RNA processing
Transcription
Import_Export
Ubiquitylation
Proteasome
Biogenesis Ribosomes
Ribosomes
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relative share | No. of proteins | relative share | No. of proteins | |||||||||||||||||||
Accession | Protein function | Protein function (translated) | Biological process | Kategory | Nuclei_geLC | Nuclei_SG | Cell_geLC | Cell_SG | Nuclei_geLC | Nuclei_SG | Cell_geLC | Cell_SG | Nuclei_geLC | Nuclei_SG | Cell_geLC | Cell_SG | Nuclei_geLC | Nuclei_SG | Cell_geLC | Cell_SG | ||
Pcordatum_s3379_g40455 | O65819, Histone H2B.3 (LeH2B-3) (Fragment) | Histone H2 B.3_Core component of nucleosome_nucleosome assembly_DNA-binding | Histone | Nucleus | 0.01872008129863878 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | Sum total | 9.327949081378868 | 11.223464967377089 | 0.7851556990393208 | 3.2969321257045414 | 133 | 306 | 53 | 260 | |
Pcordatum_s3803_g43191 | Q9U7D0, Histone H4 | Histone H4_Core component of nucleosome_nucleosome assembly_DNA-binding | Histone | Nucleus | 0.006685743320942422 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 11.880381296081914 | 3.4042147485758987 | ||||||||
Pcordatum_s6179_g55801 | P35063, Histone H2AX | Histone H2 AX_Core component of nucleosome_nucleosome assembly_DNA-binding | Histone | Nucleus | 0.0013371486641884844 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | ||||||||||
Pcordatum_s19016_g84296 | Q9U7D0, Histone H4 | Histone H4_Core component of nucleosome_nucleosome assembly_DNA-binding | Histone | Nucleus | 0 | 0.029904376825682474 | 0 | 0 | 0 | 1 | 0 | 0 | ||||||||||
Pcordatum_s7318_g60454 | Q01238, Major basic nuclear protein 2 (Protein p14 alpha chain) | Histone-like protein_DNA binding (1) | Nuclear protein/DNA-binding | Nucleus | 0.85577514508063 | 0.43505843858844556 | 0.03604507201178517 | 0.1902119864536989 | 1 | 1 | 1 | 1 | ||||||||||
Pcordatum_s32_g1358 | Q01238, Major basic nuclear protein 2 (Protein p14 alpha chain) | Histone-like protein_DNA binding (2) | Nuclear protein/DNA-binding | Nucleus | 0.8223464284759179 | 0.08618660938699943 | 0.03839583757777116 | 0.008066822683660291 | 1 | 1 | 1 | 1 | ||||||||||
Pcordatum_s10881_g71455 | Q01238, Major basic nuclear protein 2 (Protein p14 alpha chain) | Histone-like protein_DNA binding (3) | Nuclear protein/DNA-binding | Nucleus | 0.5816596689219907 | 0.013777720585174964 | 0.018806124527887914 | 0 | 1 | 1 | 1 | 0 | ||||||||||
Pcordatum_s1890_g28673 | Q01238, Major basic nuclear protein 2 (Protein p14 alpha chain) | Histone-like protein_DNA binding (4) | Nuclear protein/DNA-binding | Nucleus | 0.48271066777204286 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | ||||||||||
Pcordatum_s9136_g66650 | Q01238, Major basic nuclear protein 2 (Protein p14 alpha chain) | Histone-like protein_DNA binding (5) | Nuclear protein/DNA-binding | Nucleus | 0.2767897734870163 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | ||||||||||
Pcordatum_s961_g18642 | Q01238, Major basic nuclear protein 2 (Protein p14 alpha chain) | Histone-like protein_DNA binding (6) | Nuclear protein/DNA-binding | Nucleus | 0.09627470382157088 | 0.08945284653968573 | 0 | 0.04160943249441791 | 1 | 1 | 0 | 1 | ||||||||||
Pcordatum_s1890_g28674 | Q01238, Major basic nuclear protein 2 (Protein p14 alpha chain) | Histone-like protein_DNA binding (7) | Nuclear protein/DNA-binding | Nucleus | 0 | 0 | 0.013321004873920607 | 0 | 0 | 0 | 1 | 0 | ||||||||||
Pcordatum_s150_g4897 | A0A812PI39, HCc2 protein (major basic nuclear protein in Crypthecodinium cohnii) | Histone-like protein_DNA binding (8) | Nuclear protein/DNA-binding | Nucleus | 0 | 0 | 0 | 5.326891130387164E-4 | 0 | 0 | 0 | 1 | ||||||||||
Pcordatum_s594_g13510 | K9NVA6, Dinoflagellate viral nucleoprotein 5 (DNVP5) | DNA-binding protein_similarly to histones_compact DNA into chromatin | Nucleus_Viral proteins | Nucleus | 0.022731527291204236 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | ||||||||||
Pcordatum_s4916_g49685 | A0A401GH42, ATP-dependent DNA helicase (EC 3.6.4.12), Q7ZV90, DNA helicase | DNA helicase PIF1_ATP-dependent_nuclear genome stability_DNA duplex unwinding | DNA-recombination/replication/repair_DNA helicase | Nucleus | 0 | 2.2803483002506062E-4 | 0 | 0 | 0 | 1 | 0 | 0 | ||||||||||
Pcordatum_s14173_g78269 | Q6MHJ5, ATP-dependent DNA helicase pif1 (EC 3.6.4.12), Q6MHJ5, DNA helicase | DNA helicase PIF1_ATP-dependent_nuclear genome stability_DNA duplex unwinding | DNA-recombination/replication_DNA helicase | Nucleus | 0.08022891985130906 | 0.0035272461149431517 | 0.008619473741948627 | 0.0024253970564809915 | 1 | 1 | 1 | 1 | ||||||||||
Pcordatum_s7048_g59424 | A0A7S2I6F9, Hypothetical protein (Fragment), Q5R874, RNA helicase | RNA helicase A_ATP-dependent_DNA duplex unwinding | DNA-recombination/replication_mRNA-processing/splicing | Nucleus | 0 | 0 | 0 | 5.199238653730271E-4 | 0 | 0 | 0 | 1 | ||||||||||
Pcordatum_s1498_g24730 | P22840, DNA gyrase subunit B (EC 5.6.2.2) (Fragment), O24308, DNA topoisomerase (ATP-hydrolysing) | DNA topoisomerase 2_double-strand breaks_DNA topological change | DNA-recombination/replication/integration_DNA-Topoisomeras | Nucleus | 0.01872008129863878 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | ||||||||||
Pcordatum_s22_g970 | Q9Z321, DNA topoisomerase 3-beta-1 (EC 5.6.2.1) (DNA topoisomerase III beta-1), Q9Z321, DNA topoisomerase | DNA topoisomerase 3-beta-1_chromosome segregation_DNA topological change | DNA-recombination/replication/integration_DNA-Topoisomeras | Nucleus | 0 | 0 | 0 | 4.477482206611183E-4 | 0 | 0 | 0 | 1 | ||||||||||
Pcordatum_s4632_g48145 | O96821, Cell division control protein 2 homolog (EC 2.7.11.22) (EC 2.7.11.23), O96821, [RNA-polymerase]-subunit kinase;cyclin-dependent kinase | Involved in the control of the cell cycle | DNA-recombination/replication/integration | Nucleus | 0 | 0.005484233311953337 | 0 | 0.0018128309509651153 | 0 | 1 | 0 | 1 | ||||||||||
Pcordatum_s17443_g82798 | O94247, DNA polymerase alpha-associated DNA helicase A (EC 3.6.4.12), P30771, Hydrolases acting on acid anhydrides acting on acid anhydrides to facilitate cellular and subcellular movement | DNA polymerase alpha-associated DNA helicase A_DNA duplex unwinding_mitotic DNA replication lagging strand elongation | DNA-recombination/replication/integration | Nucleus | 0 | 0 | 0 | 5.376324438939067E-4 | 0 | 0 | 0 | 1 | ||||||||||
Pcordatum_s4125_g45180 | Q9MAY3, Proliferating cell nuclear antigen (PCNA) | PCNA_auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication | DNA-recombination/replication/integration | Nucleus | 0 | 0.00786755689806322 | 0 | 0.0029770004384930726 | 0 | 1 | 0 | 1 | ||||||||||
Pcordatum_s14759_g79259 | Q9D0F6, Replication factor C subunit 5 (Activator 1 36 kDa subunit) (A1 36 kDa subunit) (Activator 1 subunit 5) (Replication factor C 36 kDa subunit) (RF-C 36 kDa subunit) (RFC36), P09122, DNA-directed DNA polymerase | Replication factor C subunit 5_elongation of primed DNA templates by DNA polymerase delta and epsilon requires the action of the accessory proteins proliferating cell nuclear antigen (PCNA) and activator 1 | DNA-recombination/replication/integration | Nucleus | 0 | 0.0039859693661095505 | 0 | 0 | 0 | 1 | 0 | 0 | ||||||||||
Pcordatum_s6721_g58095 | Q99J62, Replication factor C subunit 4 (Activator 1 subunit 4), P75177, DNA-directed DNA polymerase | Replication factor C subunit 4_DNA-dependent DNA replication_DNA duplex unwinding | DNA-recombination/replication/integration_DNA-polymerase_DNA-directed | Nucleus | 0 | 8.602420381048406E-4 | 0 | 0 | 0 | 1 | 0 | 0 | ||||||||||
Pcordatum_s728_g15476 | P07746, High mobility group-T protein (HMG-T) (HMG-T1) (HMG-1) | DNA-binding protein_single-stranded DNA and unwinds double-stranded DNA | DNA-recombination/replication/integration | Nucleus | 0.0427887572540315 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | ||||||||||
Pcordatum_s704_g15125 | P26586, High mobility group protein homolog TDP-1 | DNA-binding protein_single-stranded DNA and unwinds double-stranded DNA | DNA-recombination/replication/integration | Nucleus | 0.1283662717620945 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | ||||||||||
Pcordatum_s2063_g30252 | A0A813IKA3, Hypothetical protein, P20825, Hydrolases acting on peptide bonds (peptidases) aspartic endopeptidases;RNA-directed DNA polymerase | Viral RNA-directed DNA polymerase_Retrovirus-related Pol polyprotein from transposon 297_DNA integration | Viral protein_DNA-integration | Nucleus | 0.038777311261466045 | 0.02262621441563996 | 0 | 0.0074642788800307 | 1 | 1 | 0 | 1 | ||||||||||
Pcordatum_s12958_g76026 | A0A813JVA5, Hypothetical protein (Fragment), P10978, Hydrolases acting on peptide bonds (peptidases) aspartic endopeptidases;RNA-directed DNA polymerase | Viral RNA-directed DNA polymerase_Retrovirus-related Pol polyprotein from transposon TNT 1-94_DNA integration | Viral protein_DNA-integration | Nucleus | 0 | 0.009146355808142713 | 0 | 0 | 0 | 1 | 0 | 0 | ||||||||||
Pcordatum_s8264_g63877 | A0A812T380, Hypothetical protein, Q9ZT94, Hydrolases acting on peptide bonds (peptidases) aspartic endopeptidases;RNA-directed DNA polymerase | Viral RNA-directed DNA polymerase_Retrovirus-related Pol polyprotein from transposon RE2_DNA integration | Viral protein_DNA-integration | Nucleus | 0 | 0 | 0 | 0.04811533817602926 | 0 | 0 | 0 | 1 | ||||||||||
Pcordatum_s4035_g44632 | A0A813KKV1, Hypothetical protein, Q94HW2, Hydrolases acting on peptide bonds (peptidases) aspartic endopeptidases;RNA-directed DNA polymerase | Viral RNA-directed DNA polymerase_Retrovirus-related Pol polyprotein from transposon RE1_DNA integration | Viral protein_DNA-integration | Nucleus | 0 | 0.005445154470104328 | 0 | 0.008040448205012173 | 0 | 1 | 0 | 1 | ||||||||||
Pcordatum_s9195_g66831 | P16423, Hydrolases acting on peptide bonds (peptidases) aspartic endopeptidases;RNA-directed DNA polymerase | Viral RNA-directed DNA polymerase_Retrovirus-related Pol polyprotein from type-2 retrotransposable element R2DM_DNA integration | Viral protein_DNA-integration | Nucleus | 0 | 0.0035414566028882464 | 0 | 0.0029893587656310483 | 0 | 1 | 0 | 1 | ||||||||||
Pcordatum_s636_g14135 | Q29Q26, Ankyrin repeat domain-containing protein 2B, Q9ZT94, Hydrolases acting on peptide bonds (peptidases) aspartic endopeptidases;RNA-directed DNA polymerase | Viral RNA-directed DNA polymerase_Retrovirus-related Pol polyprotein from transposon RE2_DNA integration | Viral protein_DNA-integration | Nucleus | 0.022731527291204236 | 8.708056508272911E-4 | 0.018806124527887914 | 0.0013095154715750752 | 1 | 1 | 1 | 1 | ||||||||||
Pcordatum_s2824_g36562 | A0A7S2TII6, Hypothetical protein, P16423, Hydrolases acting on peptide bonds (peptidases) aspartic endopeptidases;RNA-directed DNA polymerase | Viral RNA-directed DNA polymerase_Retrovirus-related Pol polyprotein from type-2 retrotransposable element R2DM_DNA integration | Viral protein_DNA-integration | Nucleus | 0.006685743320942422 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | ||||||||||
Pcordatum_s1811_g27907 | A0A813KE51, Hypothetical protein, Q03278, RNA-directed DNA polymerase | Viral RNA-directed DNA polymerase_Retrovirus-related Pol polyprotein from type-1 retrotransposable element R2_DNA integration | Viral protein_DNA-integration | Nucleus | 0 | 0 | 0.007052296697957968 | 0 | 0 | 0 | 1 | 0 | ||||||||||
Pcordatum_s2551_g34443 | A0A1D1VPG0, Uncharacterized protein, P15594, RNA-directed DNA polymerase | Viral RNA-directed DNA polymerase_Retrotransposable element SLACS 132 kDa protein2_DNA integration | Viral protein_DNA-integration | Nucleus | 0 | 5.325017844976665E-4 | 0 | 0 | 0 | 1 | 0 | 0 | ||||||||||
Pcordatum_s543_g12640 | A0A813HGK6, Hypothetical protein, P08548, RNA-directed DNA polymerase | Viral RNA-directed DNA polymerase_LINE-1 reverse transcriptase homolog_DNA integration | Viral protein_DNA-integration | Nucleus | 0 | 2.1431735900867332E-4 | 0 | 0 | 0 | 1 | 0 | 0 | ||||||||||
Pcordatum_s320_g8654 | A0A5F8H4E3, Reverse transcriptase domain-containing protein, P08548, RNA-directed DNA polymerase | Viral RNA-directed DNA polymerase_LINE-1 reverse transcriptase homolog_DNA integration | Viral protein_DNA-integration | Nucleus | 0 | 1.1871557633315347E-4 | 0 | 0 | 0 | 1 | 0 | 0 | ||||||||||
Pcordatum_s107_g3736 | A0A7S4UA22, Hypothetical protein, Q008X6, RNA helicase;DNA helicase;Hydrolases acting on ester bonds;RNA-directed RNA polymerase;Transferases transferring one-carbon groups methyltransferases;Hydrolases acting on peptide bonds (peptidases) serine endopeptidases | Viral RNA replication_Replicase polyprotein 1ab_methylation_transcription, DNA-templated | Viral protein | Nucleus | 0 | 0 | 0.007052296697957968 | 0 | 0 | 0 | 1 | 0 | ||||||||||
Pcordatum_s2242_g31841 | A0A1Q9BWJ7, Copia protein, P10978, Hydrolases acting on peptide bonds (peptidases) aspartic endopeptidases;RNA-directed DNA polymerase | Viral RNA-directed DNA polymerase_Retrovirus-related Pol polyprotein from transposon TNT 1-94_DNA integration | Viral protein_DNA-integration | Nucleus | 0.022731527291204236 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | ||||||||||
Pcordatum_s1368_g23370 | A0A812QMR8, RE1 protein, Q94HW2, Hydrolases acting on peptide bonds (peptidases) aspartic endopeptidases;RNA-directed DNA polymerase | Viral RNA-directed DNA polymerase_Retrovirus-related Pol polyprotein from transposon TNT 1-94_DNA integration | Viral protein_DNA-integration | Nucleus | 0.008022891985130906 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | ||||||||||
Pcordatum_s4265_g46006 | A0A1Q9CTG4, Reverse transcriptase domain-containing protein, Q82851, DNA-directed DNA polymerase;retroviral ribonuclease H;Transferases transferring phosphorus-containing groups nucleotidyltransferases;Hydrolases acting on ester bonds;Hydrolases acting on peptide bonds (peptidases) aspartic endopeptidases;exoribonuclease H;RNA-directed DNA polymerase | Gag-Pol polyprotein_Viral DNA-directed DNA polymerase_DNA integration | DNA-recombination/replication/integration | Nucleus | 0.002674297328376969 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | ||||||||||
Pcordatum_s8589_g64989 | A0A2E6D6E1, Reverse transcriptase Ty1/copia-type domain-containing protein, P10978, Hydrolases acting on peptide bonds (peptidases) aspartic endopeptidases;RNA-directed DNA polymerase | Viral_Retrovirus-related Pol polyprotein Ty1/copia-type domain-containing protein_DNA integration | Viral protein_DNA-integration | Nucleus | 0 | 1.3984280177805448E-4 | 0 | 0 | 0 | 1 | 0 | 0 | ||||||||||
Pcordatum_s7111_g59680 | A0A1Q9BW95, Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment), P04146, Hydrolases acting on peptide bonds (peptidases) aspartic endopeptidases | Viral_Retrovirus-related Pol polyprotein from transposon TNT 1-94_DNA integration | Viral protein_DNA-integration | Nucleus | 0 | 0 | 0 | 9.833159196551437E-4 | 0 | 0 | 0 | 1 | ||||||||||
Pcordatum_s7270_g60274 | A0A813D6L0, Hypothetical protein, P04146, Hydrolases acting on peptide bonds (peptidases) aspartic endopeptidases | Aspartyl protease_viral DNA integration_Pol polyprotein | Viral_Pol polyprotein_DNA integration | Nucleus | 0 | 0 | 0.009403062263943957 | 0 | 0 | 0 | 1 | 0 | ||||||||||
Pcordatum_s4062_g44813 | A0A1Q9ETT6, Copia protein, P04146, Hydrolases acting on peptide bonds (peptidases) aspartic endopeptidases | Aspartyl protease_viral DNA integration_Pol polyprotein | Viral_Pol polyprotein_DNA integration | Nucleus | 0 | 5.93686635400041E-4 | 0 | 0.00145287960194092 | 0 | 1 | 0 | 1 | ||||||||||
Pcordatum_s820_g16762 | P25600, Putative transposon Ty5-1 protein YCL074W, Q94HW2, Hydrolases acting on peptide bonds (peptidases) aspartic endopeptidases;RNA-directed DNA polymerase | Viral RNA-directed DNA polymerase_Retrovirus-related Pol polyprotein from transposon TNT 1-94_DNA integration | Viral protein_DNA-integration | Nucleus | 0.008022891985130906 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | ||||||||||
Pcordatum_s19245_g84463 | A0A7S0A5X2, Hypothetical protein, O13535, DNA-directed DNA polymerase;Hydrolases acting on peptide bonds (peptidases) aspartic endopeptidases;ribonuclease H;RNA-directed DNA polymerase | Transposon Ty1-H Gag-Pol polyprotein_Viral DNA-directed DNA polymerase_Transposon Ty1-H Gag-Pol polyprotein_DNA integration | Viral protein_DNA-integration | Nucleus | 0 | 0.008698631184635859 | 0 | 0.002997798598798446 | 0 | 1 | 0 | 1 | ||||||||||
Pcordatum_s279_g7787 | A0A7S3M3V3, Hypothetical protein (Fragment), P12502, DNA-directed DNA polymerase;retroviral ribonuclease H;Transferases transferring phosphorus-containing groups nucleotidyltransferases;Hydrolases acting on ester bonds;exoribonuclease H;HIV-1 retropepsin;RNA-directed DNA polymerase | Gag-Pol polyprotein_Viral DNA-directed DNA polymerase_DNA integration | Viral protein_DNA-integration | Nucleus | 0 | 0.0068999169222386395 | 0 | 0 | 0 | 1 | 0 | 0 | ||||||||||
Pcordatum_s2396_g33223 | O19048, Poly(rC)-binding protein 1 (Alpha-CP1) (Heterogeneous nuclear ribonucleoprotein E1) (hnRNP E1) | Poly(rC)-binding protein 1_Ribonucleoprotein_viral RNA genome replication | Ribonucleoprotein_viral RNA genome replication | Nucleus | 0 | 0.014524786237145659 | 0 | 0.005102481994918314 | 0 | 1 | 0 | 1 | ||||||||||
Pcordatum_s2734_g35849 | Q15366, Poly(rC)-binding protein 2 (Alpha-CP2) (Heterogeneous nuclear ribonucleoprotein E2) (hnRNP E2), Q28K17, polyribonucleotide nucleotidyltransferase | Poly(rC)-binding protein 2_viral RNA genome replication_Single-stranded nucleic acid binding protein | Viral protein_DNA replication | Nucleus | 0.07488032519455512 | 0.12196368786346083 | 0 | 0.002643174894461171 | 1 | 1 | 0 | 1 | ||||||||||
Pcordatum_s17111_g82438 | A0A1Q9ERZ7, LINE-1 retrotransposable element ORF2 protein, P11369, RNA-directed DNA polymerase;Hydrolases acting on ester bonds endodeoxyribonucleases producing 5\'-phosphomonoesters | RNA-directed DNA polymerase_DNA recombination | DNA-recombination/replication/integration_DNA-polymerase_RNA-directed | Nucleus | 0 | 6.331569906924368E-4 | 0 | 0 | 0 | 1 | 0 | 0 | ||||||||||
Pcordatum_s318_g8612 | P34730, Protein BMH2 | BMH2_DNA damage checkpoint signaling_DNA replication initiation | DNA-recombination/replication/integration_damage-checkpoint signaling | Nucleus | 0.07488032519455512 | 0.10187542309332108 | 0.02350765565985989 | 0.04160762395873918 | 1 | 1 | 1 | 1 | ||||||||||
Pcordatum_s2433_g33523 | P34730, Protein BMH2 | BMH2_DNA damage checkpoint signaling_DNA replication initiation | DNA-recombination/replication/integration_damage-checkpoint signaling | Nucleus | 0.041451608589843016 | 0.04864119519124791 | 0 | 0.02616725060159772 | 1 | 1 | 0 | 1 | ||||||||||
Pcordatum_s2841_g36691 | Q9DE27, RuvB-like 2 (EC 3.6.4.12) (Reptin), Q9DE27, DNA helicase | DNA helicase_RuvB-like 2_ core component of the chromatin remodeling INO80 complex | DNA-recombination/replication/repair_DNA helicase | Nucleus | 0.014708635306073328 | 0.0011770054147993243 | 0.006268708175962638 | 0 | 1 | 1 | 1 | 0 | ||||||||||
Pcordatum_s19050_g84322 | Q9DE27, RuvB-like 2 (EC 3.6.4.12) (Reptin), Q9DE27, DNA helicase | DNA helicase_RuvB-like 2_ core component of the chromatin remodeling INO80 complex | DNA-recombination/replication/repair_DNA helicase | Nucleus | 0 | 0.030866484861557 | 0 | 0.01027383905693486 | 0 | 1 | 0 | 1 | ||||||||||
Pcordatum_s11019_g71801 | A0A5A8D0A9, RRM domain-containing protein | ATP-dependent DNA helicase RRM3_DNA duplex unwinding_DNA-repair/replication | DNA-recombination/replication/integration | Nucleus | 0.013371486641884844 | 0.062215836303289154 | 0 | 0.0010388530361227534 | 1 | 1 | 0 | 1 | ||||||||||
Pcordatum_s639_g14175 | A0A1Q9ELG4, RRM domain-containing protein | ATP-dependent DNA helicase RRM3_DNA duplex unwinding_DNA-repair/replication | DNA-recombination/replication/integration | Nucleus | 0.01872008129863878 | 0.03983975547647867 | 0 | 0.002041716212238817 | 1 | 1 | 0 | 1 | ||||||||||
Pcordatum_s87_g3177 | A0A7S3M0Y9, Hypothetical protein, Q97VY9, DNA helicase | ATP-dependent DNA helicase Hel308_DNA damage,_DNA repair | DNA-repair/damage | Nucleus | 0 | 0 | 0 | 0.003921508196708842 | 0 | 0 | 0 | 1 | ||||||||||
Pcordatum_s1974_g29482 | A0A813DR07, Hypothetical protein (Fragment), Q8VEG4, exodeoxyribonuclease I | Double-strand break repair_Exonuclease 3'-5' domain-containing protein 2_DNA double-strand break processing | DNA-repair/damage_DNA double-strand break processing | Nucleus | 0 | 0.012416196334557957 | 0 | 0 | 0 | 1 | 0 | 0 | ||||||||||
Pcordatum_s4077_g44895 | A0A516AG34, NAD(P)(+)--arginine ADP-ribosyltransferase (EC 2.4.2.31) (Mono(ADP-ribosyl)transferase) (Fragment), O88554, Transferases glycosyltransferases pentosyltransferases;NAD+ ADP-ribosyltransferase | Double-strand break repair_Base-excision repair_Poly [ADP-ribose] polymerase 2 | DNA-repair/damage_base-excision repair | Nucleus | 0.017382932634450298 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | ||||||||||
Pcordatum_s859_g17303 | A0A812S7M1, Fan1 protein, Q5XVJ4, phosphodiesterase I | Homologous chromosome pairing at meiosis_interstrand cross-link repair | DNA-repair/damage | Nucleus | 0.05883454122429331 | 0.07273884763161081 | 0 | 0.003333055900242675 | 1 | 1 | 0 | 1 | ||||||||||
Pcordatum_s8716_g65340 | A0A7S2DKF4, Hypothetical protein (Fragment), A8LK52, DNA ligase (NAD+) | DNA ligase_DNA repair | DNA-recombination/replication/integration_DNA-polymerase_RNA-directed | Nucleus | 0.0681945818736127 | 0.0016923748610244097 | 0 | 0 | 1 | 1 | 0 | 0 | ||||||||||
Pcordatum_s1190_g21413 | A0A812U9D2, Parp1 protein, P27008, Transferases glycosyltransferases pentosyltransferases;NAD+ ADP-ribosyltransferase | Poly [ADP-ribose] polymerase 1 protein_base-excision repair | DNA repair/damage | Nucleus | 0 | 0.0019068879767547755 | 0 | 0 | 0 | 1 | 0 | 0 | ||||||||||
Pcordatum_s9436_g67583 | A0A7S1WQ66, Hypothetical protein, Q9VNV3, RNA helicase | Exonuclease_RNA helicase Ddx1_DEAD-box ATP-dependent_DNA duplex unwinding_double-strand break repair | RNA helicase_DNA duplex unwinding_double strand break repair | Nucleus | 0.23801246222555023 | 0.026466743787780835 | 0.014888181917911265 | 0.01473971649294087 | 1 | 1 | 1 | 1 | ||||||||||
Pcordatum_s2971_g37619 | A0A7S0FSP9, Hypothetical protein, Q9VNV3, RNA helicase | Exonuclease_RNA helicase Ddx1_DEAD-box ATP-dependent_DNA duplex unwinding_double-strand break repair | RNA helicase_DNA duplex unwinding_double strand break repair | Nucleus | 0.14307490706816783 | 0.013649463681221535 | 0 | 0.029981000214115677 | 1 | 1 | 0 | 1 | ||||||||||
Pcordatum_s1870_g28486 | A0A7S1F1H0, Hypothetical protein (Fragment), Q90WU3, RNA helicase | Exonuclease_RNA helicase Ddx1_DEAD-box ATP-dependent_DNA duplex unwinding_double-strand break repair | RNA helicase_DNA duplex unwinding_double strand break repair | Nucleus | 0.10162329847832481 | 0.023408081262578234 | 0 | 0.013141573798171442 | 1 | 1 | 0 | 1 | ||||||||||
Pcordatum_s2303_g32387 | A0A7S2KVR9, Hypothetical protein (Fragment), A2VD92, RNA helicase | Exonuclease_RNA helicase Ddx1_DEAD-box ATP-dependent_DNA duplex unwinding_double-strand break repair | RNA helicase_DNA duplex unwinding_double strand break repair | Nucleus | 0.04680020324659696 | 0.004122201543909718 | 0 | 0.003220097775975446 | 1 | 1 | 0 | 1 | ||||||||||
Pcordatum_s5494_g52573 | A0A7S4UZF8, Hypothetical protein (Fragment), A2VD92, RNA helicase | Exonuclease_RNA helicase Ddx1_DEAD-box ATP-dependent_DNA duplex unwinding_double-strand break repair | RNA helicase_DNA duplex unwinding_double strand break repair | Nucleus | 0.01872008129863878 | 0.02035761151869091 | 0 | 0.015977207031110597 | 1 | 1 | 0 | 1 | ||||||||||
Pcordatum_s4160_g45392 | A0A7S1F1H0, Hypothetical protein (Fragment), Q90WU3, RNA helicase | Exonuclease_RNA helicase Ddx1_DEAD-box ATP-dependent_DNA duplex unwinding_double-strand break repair | RNA helicase_DNA duplex unwinding_double strand break repair | Nucleus | 0.017382932634450298 | 2.468709768012627E-4 | 0.0023507655659859893 | 0.0030127416248439376 | 1 | 1 | 1 | 1 | ||||||||||
Pcordatum_s1957_g29298 | A0A813JMV3, Hypothetical protein, Q9VNV3, RNA helicase | Exonuclease_RNA helicase Ddx1_DEAD-box ATP-dependent_DNA duplex unwinding_double-strand break repair | RNA helicase_DNA duplex unwinding_double strand break repair | Nucleus | 0.013371486641884844 | 0.0030727642594134256 | 0 | 0.0037927253852527427 | 1 | 1 | 0 | 1 | ||||||||||
Pcordatum_s3047_g38169 | A0A7S0FV17, Hypothetical protein (Fragment), Q9VNV3, RNA helicase | Exonuclease_RNA helicase Ddx1_DEAD-box ATP-dependent_DNA duplex unwinding_double-strand break repair | RNA helicase_DNA duplex unwinding_double strand break repair | Nucleus | 0 | 0.005236202295319822 | 0 | 0.0053241783268690715 | 0 | 1 | 0 | 1 | ||||||||||
Pcordatum_s363_g9492 | A0A7S1F1H0, Hypothetical protein (Fragment), Q90WU3, RNA helicase | Exonuclease_RNA helicase Ddx1_DEAD-box ATP-dependent_DNA duplex unwinding_double-strand break repair | RNA helicase_DNA duplex unwinding_double strand break repair | Nucleus | 0 | 0.002371048914634859 | 0 | 0.006785595724326654 | 0 | 1 | 0 | 1 | ||||||||||
Pcordatum_s3047_g38170 | A0A7S2QHJ2, Hypothetical protein (Fragment), Q9VNV3, RNA helicase | Exonuclease_RNA helicase Ddx1_DEAD-box ATP-dependent_DNA duplex unwinding_double-strand break repair | RNA helicase_DNA duplex unwinding_double strand break repair | Nucleus | 0 | 0 | 0 | 0.0023323705025064126 | 0 | 0 | 0 | 1 | ||||||||||
Pcordatum_s7354_g60595 | Q6XJU9, Osteoclast-stimulating factor 1 (Osteoclast-stimulating factor-like), Q9TXQ1, NAD+ ADP-ribosyltransferase;Transferases glycosyltransferases pentosyltransferases | Double-strand break repair_cellular response to DNA damage stimulus | DNA-repair/damage | Nucleus | 0 | 0 | 0.004701531131971979 | 0 | 0 | 0 | 1 | 0 | ||||||||||
Pcordatum_s1963_g29363 | Q6GL04, vesicle-fusing ATPase | Double-strand break repair_Transitional endoplasmic reticulum ATPase | DNA-repair/damage_Autophagy | Nucleus | 0 | 8.839503521765037E-4 | 0 | 0.003225824805624752 | 0 | 1 | 0 | 1 | ||||||||||
Pcordatum_s12793_g75715 | P53041, Serine/threonine-protein phosphatase 5 (PP5) (EC 3.1.3.16) (Protein phosphatase T) (PP-T) (PPT), P53041, protein-serine/threonine phosphatase | Double-strand break repair_Serine/threonine-protein phosphatase 5 | DNA-repair/damage_DNA double-strand break processing | Nucleus | 0.36370443665926777 | 0.10655835889114591 | 0.08854550298547226 | 0.06729561260547394 | 1 | 1 | 1 | 1 | ||||||||||
Pcordatum_s2381_g33121 | O74859, Aprataxin-like protein (EC 3.6.1.71) (EC 3.6.1.72) (Hit family protein 3), P61802, DNA-3\'-diphospho-5\'-guanosine diphosphatase;adenosine-5\'-diphospho-5\'-[DNA] diphosphatase | Double-strand break repair_mismatch repair | DNA-repair/damage_DNA double-strand break processing | Nucleus | 0.01203433797769636 | 0.005831810246692032 | 0 | 0.0014280273074890645 | 1 | 1 | 0 | 1 | ||||||||||
Pcordatum_s1820_g28008 | Q08E38, RING-type E3 ubiquitin transferase | Pre-mRNA-processing factor 19_DNA damage checkpoint signaling/PRP19C/Prp19 complex | DNA-repair/damage_Ubiquitin conjugation pathway | Nucleus | 0 | 0.005393242687611021 | 0 | 0 | 0 | 1 | 0 | 0 | ||||||||||
Pcordatum_s2100_g30583 | A0A7S3X8A6, Hypothetical protein (Fragment), Q5ZMA2, RING-type E3 ubiquitin transferase | Pre-mRNA-processing factor 19_DNA damage checkpoint signaling/PRP19C/Prp19 complex | DNA-repair/damage_Ubiquitin conjugation pathway | Nucleus | 0 | 0.003752221339910646 | 0 | 0 | 0 | 1 | 0 | 0 | ||||||||||
Pcordatum_s1542_g25226 | A0A812KZ61, POC1B protein, Q5ZMA2, RING-type E3 ubiquitin transferase | Pre-mRNA-processing factor 19_DNA repair, PRP19C/Prp19 complex | DNA-repair/damage_Ubiquitin conjugation pathway | Nucleus | 0.004011445992565453 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | ||||||||||
Pcordatum_s3608_g41991 | Q96FW1, Ubiquitin thioesterase OTUB1 (EC 3.4.19.12) (Deubiquitinating enzyme OTUB1) (OTU domain-containing ubiquitin aldehyde-binding protein 1) (Otubain-1) (hOTU1) (Ubiquitin-specific-processing protease OTUB1), Q96FW1, ubiquitinyl hydrolase 1 | Ubiquitin thioesterase OTUB1_non-catalytic role in DNA repair _cellular response to DNA damage stimulus_DNA repair | DNA_repair_Ubiquitin_Ubl conjugation pathway | Nucleus | 0 | 0 | 0 | 0.0024074548754349423 | 0 | 0 | 0 | 1 | ||||||||||
Pcordatum_s3474_g41099 | Q99NB8, Ubiquilin-4 (Ataxin-1 interacting ubiquitin-like protein) (A1Up) (Ataxin-1 ubiquitin-like-interacting protein A1U) (Connexin43-interacting protein of 75 kDa) (CIP75), Q9JK66, RBR-type E3 ubiquitin transferase | Ubiquilin_Regulator of protein degradation_DNA repair | DNA_repair_Ubiquitin_Ubl conjugation pathway | Nucleus | 0 | 0.003980386674416835 | 0 | 0 | 0 | 1 | 0 | 0 | ||||||||||
Pcordatum_s7698_g61890 | O74803, UV excision repair protein rhp23 (RAD23 homolog) | Repair protein rhp23_nucleotide-excision repair | DNA-repair/damage | Nucleus | 0 | 0.0011921584351081242 | 0 | 0 | 0 | 1 | 0 | 0 | ||||||||||
Pcordatum_s5695_g53602 | Q28811, Deoxyribodipyrimidine photo-lyase (EC 4.1.99.3) (DNA photolyase) (Photoreactivating enzyme), Q28811, deoxyribodipyrimidine photo-lyase | Deoxyribodipyrimidine photo-lyase_protein-chromophore linkage | DNA-repair/damage | Nucleus | 0.028080121947958173 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | ||||||||||
Pcordatum_s617_g13856 | Q10301, UPF0652 protein C22H10.08, Q8K1E6, mRNA N1-methyladenine demethylase | DNA-dealkylation_oxidative single-stranded DNA demethylation | DNA-repair/damage | Nucleus | 0 | 0 | 0.007835885219953298 | 0 | 0 | 0 | 1 | 0 | ||||||||||
Pcordatum_s6331_g56483 | A0A7S1WQN9, Sugar phosphate phosphatase (EC 3.1.3.-) (Fragment), O94725, Hydrolases acting on ester bonds phosphoric-monoester hydrolases | Damage-control phosphatase_regulation of response to DNA damage stimulus | DNA-repair/damage_regulation of response to DNA damage stimulus | Nucleus | 0 | 0.016164865052482328 | 0.0015671770439906595 | 0.004025370893625133 | 0 | 1 | 1 | 1 | ||||||||||
Pcordatum_s4874_g49461 | A0A7S2N0P4, Hypothetical protein (Fragment), Q54VI1, non-specific serine/threonine protein kinase | DNA damage checkpoint signaling_Kinase, Serine/threonine-protein kinase, Transferase | DNA-repair/damage_regulation of response to DNA damage stimulus | Nucleus | 0 | 0.008877277318802763 | 0 | 0 | 0 | 1 | 0 | 0 | ||||||||||
Pcordatum_s5221_g51203 | Q54MH0, non-specific serine/threonine protein kinase | DNA damage checkpoint signaling_Kinase, Serine/threonine-protein kinase, Transferase | DNA-repair/damage_regulation of response to DNA damage stimulus | Nucleus | 0 | 0.0011169733534802505 | 0 | 0.004638215815058145 | 0 | 1 | 0 | 1 | ||||||||||
Pcordatum_s11304_g72503 | Q90WU3, ATP-dependent RNA helicase DDX1 (EC 3.6.4.13) (DEAD box protein 1), Q90WU3, RNA helicase | RNA helicase DDX1_ATP-dependent_DNA duplex unwinding_DNA repair_double-strand break repair | DNA repair/damage | Nucleus | 0 | 0 | 0 | 0.0017363374273202433 | 0 | 0 | 0 | 1 | ||||||||||
Pcordatum_s8954_g66098 | A0A7S1WBK9, Hypothetical protein (Fragment), Q9EPU0, Hydrolases acting on acid anhydrides acting on acid anhydrides to facilitate cellular and subcellular movement | RNA-helicase_Regulator of nonsense transcripts 1_Nonsense-mediated mRNA decay_DNA repair | DNA repair/damage | Nucleus | 0 | 0 | 0 | 9.664061110590356E-4 | 0 | 0 | 0 | 1 | ||||||||||
Pcordatum_s5196_g51086 | A0A7S1Q388, Hypothetical protein (Fragment), Q8H136, RNA helicase | RNA helicase 14_DEAD-box ATP-dependent _Nonsense-mediated mRNA decay, Ribosome biogenesis, rRNA processing | RNA helicase_Ribosomebiogenesis_rRNA-processing | Nucleus | 0 | 0 | 0 | 0.01600885640548834 | 0 | 0 | 0 | 1 | ||||||||||
Pcordatum_s2064_g30255 | A0A7S3HIK2, Hypothetical protein (Fragment), Q5N7W4, RNA helicase | RNA helicase 30_DEAD-box ATP-dependent _Nonsense-mediated mRNA decay, Ribosome biogenesis, rRNA processing | RNA helicase_Ribosomebiogenesis_rRNA-processing | Nucleus | 0 | 0 | 0 | 0.0061531658686060815 | 0 | 0 | 0 | 1 | ||||||||||
Pcordatum_s6523_g57287 | A0A7S1Q5B2, Hypothetical protein (Fragment), Q8W4R3, RNA helicase | RNA helicase 30_DEAD-box ATP-dependent _Nonsense-mediated mRNA decay, Ribosome biogenesis, rRNA processing | RNA helicase_Ribosome biogenesis/Nonsense-mediated mRNA decay/rRNA processing | Nucleus | 0 | 0 | 0 | 5.898237693558694E-4 | 0 | 0 | 0 | 1 | ||||||||||
Pcordatum_s9712_g68359 | A0A7S2Q7H8, Hypothetical protein (Fragment), Q9LYJ9, RNA helicase | RNA helicase 46_DEAD-box ATP-dependent | RNA helicase | Nucleus | 0.004011445992565453 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | ||||||||||
Pcordatum_s6750_g58210 | Q9LYJ9, RNA helicase | RNA helicase 46_DEAD-box ATP-dependent | RNA helicase | Nucleus | 0 | 0 | 0 | 0.021822168277800095 | 0 | 0 | 0 | 1 | ||||||||||
Pcordatum_s7447_g60947 | A0A7S2AJ90, Hypothetical protein (Fragment), Q6FLF3, RNA helicase | RNA helicase DBP2_DEAD-box ATP-dependent | RNA helicase_Ribosome biogenesis/Nonsense-mediated mRNA decay/rRNA processing | Nucleus | 0 | 0.006050187745113588 | 0 | 0.0039754628444575646 | 0 | 1 | 0 | 1 | ||||||||||
Pcordatum_s132_g4421 | B7P8J4, RNA helicase (EC 3.6.4.13) (Fragment), Q59LU0, RNA helicase | RNA helicase DBP2_DEAD-box ATP-dependent _Nonsense-mediated mRNA decay, Ribosome biogenesis, rRNA processing | RNA helicase_Ribosomebiogenesis_rRNA-processing | Nucleus | 0 | 0.006037050294013328 | 0 | 0.013867248739261106 | 0 | 1 | 0 | 1 | ||||||||||
Pcordatum_s5792_g54056 | Q59LU0, RNA helicase | RNA helicase DBP2_DEAD-box ATP-dependent _Nonsense-mediated mRNA decay, Ribosome biogenesis, rRNA processing | RNA helicase_Ribosomebiogenesis_rRNA-processing | Nucleus | 0 | 0.001881874617871828 | 0 | 0 | 0 | 1 | 0 | 0 | ||||||||||
Pcordatum_s883_g17604 | A0A813L2F3, Hypothetical protein, P24782, RNA helicase | RNA helicase dbp2_DEAD-box ATP-dependent_Nonsense-mediated mRNA decay, Ribosome biogenesis, rRNA processing | RNA helicase_Ribosome biogenesis/Nonsense-mediated mRNA decay/rRNA processing | Nucleus | 0 | 0 | 0 | 0.0013325441592175467 | 0 | 0 | 0 | 1 |
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relative share | No. of proteins | relative share | No. of proteins | |||||||||||||||||||
Accession | Protein function | Protein function (translated) | Biological process | Kategory | Nuclei_geLC | Nuclei_SG | Cell_geLC | Cell_SG | Nuclei_geLC | Nuclei_SG | Cell_geLC | Cell_SG | Nuclei_geLC | Nuclei_SG | Cell_geLC | Cell_SG | Nuclei_geLC | Nuclei_SG | Cell_geLC | Cell_SG | ||
Sum total | 3.165030888134143 | 0.6543799919259883 | 0.10656803899136483 | 0.24042093074481585 | 10 | 5 | 4 | 4 | ||||||||||||||
Histones | 29.699625873669348 | 2.721809577472067 | ||||||||||||||||||||
Pcordatum_s3379_g40455 | O65819, Histone H2B.3 (LeH2B-3) (Fragment) | Histone H2 B.3_Core component of nucleosome_nucleosome assembly_DNA-binding | Histone | Nucleus | 0.01872008129863878 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | ||||||||||
Pcordatum_s3803_g43191 | Q9U7D0, Histone H4 | Histone H4_Core component of nucleosome_nucleosome assembly_DNA-binding | Histone | Nucleus | 0.006685743320942422 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | ||||||||||
Pcordatum_s6179_g55801 | P35063, Histone H2AX | Histone H2 AX_Core component of nucleosome_nucleosome assembly_DNA-binding | Histone | Nucleus | 0.0013371486641884844 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | ||||||||||
Pcordatum_s19016_g84296 | Q9U7D0, Histone H4 | Histone H4_Core component of nucleosome_nucleosome assembly_DNA-binding | Histone | Nucleus | 0 | 0.029904376825682474 | 0 | 0 | 0 | 1 | 0 | 0 | ||||||||||
Sum | 0.026742973283769688 | 0.029904376825682474 | 0 | 0 | 3 | 1 | 0 | 0 | ||||||||||||||
Nuclei | Nuclei | |||||||||||||||||||||
MBNP | ||||||||||||||||||||||
Pcordatum_s7318_g60454 | Q01238, Major basic nuclear protein 2 (Protein p14 alpha chain) | Histone-like protein_DNA binding (1) | Nuclear protein/DNA-binding | Nucleus | 0.85577514508063 | 0.43505843858844556 | 0.03604507201178517 | 0.1902119864536989 | 1 | 1 | 1 | 1 | ||||||||||
Pcordatum_s32_g1358 | Q01238, Major basic nuclear protein 2 (Protein p14 alpha chain) | Histone-like protein_DNA binding (2) | Nuclear protein/DNA-binding | Nucleus | 0.8223464284759179 | 0.08618660938699943 | 0.03839583757777116 | 0.008066822683660291 | 1 | 1 | 1 | 1 | ||||||||||
Pcordatum_s10881_g71455 | Q01238, Major basic nuclear protein 2 (Protein p14 alpha chain) | Histone-like protein_DNA binding (3) | Nuclear protein/DNA-binding | Nucleus | 0.5816596689219907 | 0.013777720585174964 | 0.018806124527887914 | 0 | 1 | 1 | 1 | 0 | ||||||||||
Pcordatum_s1890_g28673 | Q01238, Major basic nuclear protein 2 (Protein p14 alpha chain) | Histone-like protein_DNA binding (4) | Nuclear protein/DNA-binding | Nucleus | 0.48271066777204286 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | ||||||||||
Pcordatum_s9136_g66650 | Q01238, Major basic nuclear protein 2 (Protein p14 alpha chain) | Histone-like protein_DNA binding (5) | Nuclear protein/DNA-binding | Nucleus | 0.2767897734870163 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | ||||||||||
Pcordatum_s961_g18642 | Q01238, Major basic nuclear protein 2 (Protein p14 alpha chain) | Histone-like protein_DNA binding (6) | Nuclear protein/DNA-binding | Nucleus | 0.09627470382157088 | 0.08945284653968573 | 0 | 0.04160943249441791 | 1 | 1 | 0 | 1 | ||||||||||
Pcordatum_s1890_g28674 | Q01238, Major basic nuclear protein 2 (Protein p14 alpha chain) | Histone-like protein_DNA binding (7) | Nuclear protein/DNA-binding | Nucleus | 0 | 0 | 0.013321004873920607 | 0 | 0 | 0 | 1 | 0 | ||||||||||
Pcordatum_s150_g4897 | A0A812PI39, HCc2 protein (major basic nuclear protein in Crypthecodinium cohnii) | Histone-like protein_DNA binding (8) | Nuclear protein/DNA-binding | Nucleus | 0 | 0 | 0 | 5.326891130387164E-4 | 0 | 0 | 0 | 1 | ||||||||||
Sum | 3.115556387559169 | 0.6244756151003058 | 0.10656803899136483 | 0.24042093074481585 | 6 | 4 | 4 | 4 | ||||||||||||||
29.23537316672986 | 2.5974261607161306 | |||||||||||||||||||||
Viral proteins | ||||||||||||||||||||||
Pcordatum_s594_g13510 | K9NVA6, Dinoflagellate viral nucleoprotein 5 (DNVP5) | DNA-binding protein_similarly to histones_compact DNA into chromatin | Nucleus_Viral proteins | Nucleus | 0.022731527291204236 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | ||||||||||
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relative share | No. of proteins | relative share | No. of proteins | ||||||||||||||||||||
Accession | Protein function | Protein function (translated) | Biological process | Kategory | Nuclei_geLC | Nuclei_SG | Cell_geLC | Cell_SG | Nuclei_geLC | Nuclei_SG | Cell_geLC | Cell_SG | Nuclei_geLC | Nuclei_SG | Cell_geLC | Cell_SG | Nuclei_geLC | Nuclei_SG | Cell_geLC | Cell_SG | |||
Sum total | 0.5709624796084828 | 0.3684191311465617 | 0.07444090958955632 | 0.1575939980442564 | 14 | 23 | 6 | 18 | |||||||||||||||
Replication fork | 7.670009444492144 | 2.3377738728546014 | |||||||||||||||||||||
Pcordatum_s4916_g49685 | A0A401GH42, ATP-dependent DNA helicase (EC 3.6.4.12), Q7ZV90, DNA helicase | DNA helicase PIF1_ATP-dependent_nuclear genome stability_DNA duplex unwinding | DNA-recombination/replication/repair_DNA helicase | Nucleus | 0 | 2.2803483002506062E-4 | 0 | 0 | 0 | 1 | 0 | 0 | |||||||||||
Pcordatum_s14173_g78269 | Q6MHJ5, ATP-dependent DNA helicase pif1 (EC 3.6.4.12), Q6MHJ5, DNA helicase | DNA helicase PIF1_ATP-dependent_nuclear genome stability_DNA duplex unwinding | DNA-recombination/replication_DNA helicase | Nucleus | 0.08022891985130906 | 0.0035272461149431517 | 0.008619473741948627 | 0.0024253970564809915 | 1 | 1 | 1 | 1 | |||||||||||
Pcordatum_s7048_g59424 | A0A7S2I6F9, Hypothetical protein (Fragment), Q5R874, RNA helicase | RNA helicase A_ATP-dependent_DNA duplex unwinding | DNA-recombination/replication_mRNA-processing/splicing | Nucleus | 0 | 0 | 0 | 5.199238653730271E-4 | 0 | 0 | 0 | 1 | |||||||||||
Pcordatum_s1498_g24730 | P22840, DNA gyrase subunit B (EC 5.6.2.2) (Fragment), O24308, DNA topoisomerase (ATP-hydrolysing) | DNA topoisomerase 2_double-strand breaks_DNA topological change | DNA-recombination/replication/integration_DNA-Topoisomeras | Nucleus | 0.01872008129863878 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | |||||||||||
Pcordatum_s22_g970 | Q9Z321, DNA topoisomerase 3-beta-1 (EC 5.6.2.1) (DNA topoisomerase III beta-1), Q9Z321, DNA topoisomerase | DNA topoisomerase 3-beta-1_chromosome segregation_DNA topological change | DNA-recombination/replication/integration_DNA-Topoisomeras | Nucleus | 0 | 0 | 0 | 4.477482206611183E-4 | 0 | 0 | 0 | 1 | |||||||||||
Pcordatum_s4632_g48145 | O96821, Cell division control protein 2 homolog (EC 2.7.11.22) (EC 2.7.11.23), O96821, [RNA-polymerase]-subunit kinase;cyclin-dependent kinase | Involved in the control of the cell cycle | DNA-recombination/replication/integration | Nucleus | 0 | 0.005484233311953337 | 0 | 0.0018128309509651153 | 0 | 1 | 0 | 1 | |||||||||||
Pcordatum_s17443_g82798 | O94247, DNA polymerase alpha-associated DNA helicase A (EC 3.6.4.12), P30771, Hydrolases acting on acid anhydrides acting on acid anhydrides to facilitate cellular and subcellular movement | DNA polymerase alpha-associated DNA helicase A_DNA duplex unwinding_mitotic DNA replication lagging strand elongation | DNA-recombination/replication/integration | Nucleus | 0 | 0 | 0 | 5.376324438939067E-4 | 0 | 0 | 0 | 1 | |||||||||||
Pcordatum_s4125_g45180 | Q9MAY3, Proliferating cell nuclear antigen (PCNA) | PCNA_auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication | DNA-recombination/replication/integration | Nucleus | 0 | 0.00786755689806322 | 0 | 0.0029770004384930726 | 0 | 1 | 0 | 1 | |||||||||||
Pcordatum_s14759_g79259 | Q9D0F6, Replication factor C subunit 5 (Activator 1 36 kDa subunit) (A1 36 kDa subunit) (Activator 1 subunit 5) (Replication factor C 36 kDa subunit) (RF-C 36 kDa subunit) (RFC36), P09122, DNA-directed DNA polymerase | Replication factor C subunit 5_elongation of primed DNA templates by DNA polymerase delta and epsilon requires the action of the accessory proteins proliferating cell nuclear antigen (PCNA) and activator 1 | DNA-recombination/replication/integration | Nucleus | 0 | 0.0039859693661095505 | 0 | 0 | 0 | 1 | 0 | 0 | |||||||||||
Pcordatum_s6721_g58095 | Q99J62, Replication factor C subunit 4 (Activator 1 subunit 4), P75177, DNA-directed DNA polymerase | Replication factor C subunit 4_DNA-dependent DNA replication_DNA duplex unwinding | DNA-recombination/replication/integration_DNA-polymerase_DNA-directed | Nucleus | 0 | 8.602420381048406E-4 | 0 | 0 | 0 | 1 | 0 | 0 | |||||||||||
Pcordatum_s728_g15476 | P07746, High mobility group-T protein (HMG-T) (HMG-T1) (HMG-1) | DNA-binding protein_single-stranded DNA and unwinds double-stranded DNA | DNA-recombination/replication/integration | Nucleus | 0.0427887572540315 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | |||||||||||
Pcordatum_s704_g15125 | P26586, High mobility group protein homolog TDP-1 | DNA-binding protein_single-stranded DNA and unwinds double-stranded DNA | DNA-recombination/replication/integration | Nucleus | 0.1283662717620945 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | |||||||||||
Sum | 0.27010403016607387 | 0.02195328255919916 | 0.008619473741948627 | 0.008720532975867232 | 4 | 6 | 1 | 6 | |||||||||||||||
31.336487383394566 | 2.5174244074245897 | ||||||||||||||||||||||
RNA-directed DNA polymerase | |||||||||||||||||||||||
Pcordatum_s2063_g30252 | A0A813IKA3, Hypothetical protein, P20825, Hydrolases acting on peptide bonds (peptidases) aspartic endopeptidases;RNA-directed DNA polymerase | Viral RNA-directed DNA polymerase_Retrovirus-related Pol polyprotein from transposon 297_DNA integration | Viral protein_DNA-integration | Nucleus | 0.038777311261466045 | 0.02262621441563996 | 0 | 0.0074642788800307 | 1 | 1 | 0 | 1 | |||||||||||
Pcordatum_s12958_g76026 | A0A813JVA5, Hypothetical protein (Fragment), P10978, Hydrolases acting on peptide bonds (peptidases) aspartic endopeptidases;RNA-directed DNA polymerase | Viral RNA-directed DNA polymerase_Retrovirus-related Pol polyprotein from transposon TNT 1-94_DNA integration | Viral protein_DNA-integration | Nucleus | 0 | 0.009146355808142713 | 0 | 0 | 0 | 1 | 0 | 0 | |||||||||||
Pcordatum_s8264_g63877 | A0A812T380, Hypothetical protein, Q9ZT94, Hydrolases acting on peptide bonds (peptidases) aspartic endopeptidases;RNA-directed DNA polymerase | Viral RNA-directed DNA polymerase_Retrovirus-related Pol polyprotein from transposon RE2_DNA integration | Viral protein_DNA-integration | Nucleus | 0 | 0 | 0 | 0.04811533817602926 | 0 | 0 | 0 | 1 | |||||||||||
Pcordatum_s4035_g44632 | A0A813KKV1, Hypothetical protein, Q94HW2, Hydrolases acting on peptide bonds (peptidases) aspartic endopeptidases;RNA-directed DNA polymerase | Viral RNA-directed DNA polymerase_Retrovirus-related Pol polyprotein from transposon RE1_DNA integration | Viral protein_DNA-integration | Nucleus | 0 | 0.005445154470104328 | 0 | 0.008040448205012173 | 0 | 1 | 0 | 1 | |||||||||||
Pcordatum_s9195_g66831 | P16423, Hydrolases acting on peptide bonds (peptidases) aspartic endopeptidases;RNA-directed DNA polymerase | Viral RNA-directed DNA polymerase_Retrovirus-related Pol polyprotein from type-2 retrotransposable element R2DM_DNA integration | Viral protein_DNA-integration | Nucleus | 0 | 0.0035414566028882464 | 0 | 0.0029893587656310483 | 0 | 1 | 0 | 1 | |||||||||||
Pcordatum_s636_g14135 | Q29Q26, Ankyrin repeat domain-containing protein 2B, Q9ZT94, Hydrolases acting on peptide bonds (peptidases) aspartic endopeptidases;RNA-directed DNA polymerase | Viral RNA-directed DNA polymerase_Retrovirus-related Pol polyprotein from transposon RE2_DNA integration | Viral protein_DNA-integration | Nucleus | 0.022731527291204236 | 8.708056508272911E-4 | 0.018806124527887914 | 0.0013095154715750752 | 1 | 1 | 1 | 1 | |||||||||||
Pcordatum_s2824_g36562 | A0A7S2TII6, Hypothetical protein, P16423, Hydrolases acting on peptide bonds (peptidases) aspartic endopeptidases;RNA-directed DNA polymerase | Viral RNA-directed DNA polymerase_Retrovirus-related Pol polyprotein from type-2 retrotransposable element R2DM_DNA integration | Viral protein_DNA-integration | Nucleus | 0.006685743320942422 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | |||||||||||
Pcordatum_s1811_g27907 | A0A813KE51, Hypothetical protein, Q03278, RNA-directed DNA polymerase | Viral RNA-directed DNA polymerase_Retrovirus-related Pol polyprotein from type-1 retrotransposable element R2_DNA integration | Viral protein_DNA-integration | Nucleus | 0 | 0 | 0.007052296697957968 | 0 | 0 | 0 | 1 | 0 | |||||||||||
Pcordatum_s2551_g34443 | A0A1D1VPG0, Uncharacterized protein, P15594, RNA-directed DNA polymerase | Viral RNA-directed DNA polymerase_Retrotransposable element SLACS 132 kDa protein2_DNA integration | Viral protein_DNA-integration | Nucleus | 0 | 5.325017844976665E-4 | 0 | 0 | 0 | 1 | 0 | 0 | |||||||||||
Pcordatum_s543_g12640 | A0A813HGK6, Hypothetical protein, P08548, RNA-directed DNA polymerase | Viral RNA-directed DNA polymerase_LINE-1 reverse transcriptase homolog_DNA integration | Viral protein_DNA-integration | Nucleus | 0 | 2.1431735900867332E-4 | 0 | 0 | 0 | 1 | 0 | 0 | |||||||||||
Pcordatum_s320_g8654 | A0A5F8H4E3, Reverse transcriptase domain-containing protein, P08548, RNA-directed DNA polymerase | Viral RNA-directed DNA polymerase_LINE-1 reverse transcriptase homolog_DNA integration | Viral protein_DNA-integration | Nucleus | 0 | 1.1871557633315347E-4 | 0 | 0 | 0 | 1 | 0 | 0 | |||||||||||
Sum | 0.0681945818736127 | 0.04249552166744203 | 0.025858421225845883 | 0.06791893949827826 | 3 | 8 | 2 | 5 | |||||||||||||||
2.6372291362262743 | 0.6256799941424186 | ||||||||||||||||||||||
Retrovirus-related Pol polyprotein | |||||||||||||||||||||||
Pcordatum_s107_g3736 | A0A7S4UA22, Hypothetical protein, Q008X6, RNA helicase;DNA helicase;Hydrolases acting on ester bonds;RNA-directed RNA polymerase;Transferases transferring one-carbon groups methyltransferases;Hydrolases acting on peptide bonds (peptidases) serine endopeptidases | Viral RNA replication_Replicase polyprotein 1ab_methylation_transcription, DNA-templated | Viral protein | Nucleus | 0 | 0 | 0.007052296697957968 | 0 | 0 | 0 | 1 | 0 | |||||||||||
Pcordatum_s2242_g31841 | A0A1Q9BWJ7, Copia protein, P10978, Hydrolases acting on peptide bonds (peptidases) aspartic endopeptidases;RNA-directed DNA polymerase | Viral RNA-directed DNA polymerase_Retrovirus-related Pol polyprotein from transposon TNT 1-94_DNA integration | Viral protein_DNA-integration | Nucleus | 0.022731527291204236 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | |||||||||||
Pcordatum_s1368_g23370 | A0A812QMR8, RE1 protein, Q94HW2, Hydrolases acting on peptide bonds (peptidases) aspartic endopeptidases;RNA-directed DNA polymerase | Viral RNA-directed DNA polymerase_Retrovirus-related Pol polyprotein from transposon TNT 1-94_DNA integration | Viral protein_DNA-integration | Nucleus | 0.008022891985130906 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | |||||||||||
Pcordatum_s4265_g46006 | A0A1Q9CTG4, Reverse transcriptase domain-containing protein, Q82851, DNA-directed DNA polymerase;retroviral ribonuclease H;Transferases transferring phosphorus-containing groups nucleotidyltransferases;Hydrolases acting on ester bonds;Hydrolases acting on peptide bonds (peptidases) aspartic endopeptidases;exoribonuclease H;RNA-directed DNA polymerase | Gag-Pol polyprotein_Viral DNA-directed DNA polymerase_DNA integration | DNA-recombination/replication/integration | Nucleus | 0.002674297328376969 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | |||||||||||
Pcordatum_s8589_g64989 | A0A2E6D6E1, Reverse transcriptase Ty1/copia-type domain-containing protein, P10978, Hydrolases acting on peptide bonds (peptidases) aspartic endopeptidases;RNA-directed DNA polymerase | Viral_Retrovirus-related Pol polyprotein Ty1/copia-type domain-containing protein_DNA integration | Viral protein_DNA-integration | Nucleus | 0 | 1.3984280177805448E-4 | 0 | 0 | 0 | 1 | 0 | 0 | |||||||||||
Pcordatum_s7111_g59680 | A0A1Q9BW95, Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment), P04146, Hydrolases acting on peptide bonds (peptidases) aspartic endopeptidases | Viral_Retrovirus-related Pol polyprotein from transposon TNT 1-94_DNA integration | Viral protein_DNA-integration | Nucleus | 0 | 0 | 0 | 9.833159196551437E-4 | 0 | 0 | 0 | 1 | |||||||||||
Pcordatum_s7270_g60274 | A0A813D6L0, Hypothetical protein, P04146, Hydrolases acting on peptide bonds (peptidases) aspartic endopeptidases | Aspartyl protease_viral DNA integration_Pol polyprotein | Viral_Pol polyprotein_DNA integration | Nucleus | 0 | 0 | 0.009403062263943957 | 0 | 0 | 0 | 1 | 0 | |||||||||||
Pcordatum_s4062_g44813 | A0A1Q9ETT6, Copia protein, P04146, Hydrolases acting on peptide bonds (peptidases) aspartic endopeptidases | Aspartyl protease_viral DNA integration_Pol polyprotein | Viral_Pol polyprotein_DNA integration | Nucleus | 0 | 5.93686635400041E-4 | 0 | 0.00145287960194092 | 0 | 1 | 0 | 1 | |||||||||||
Pcordatum_s820_g16762 | P25600, Putative transposon Ty5-1 protein YCL074W, Q94HW2, Hydrolases acting on peptide bonds (peptidases) aspartic endopeptidases;RNA-directed DNA polymerase | Viral RNA-directed DNA polymerase_Retrovirus-related Pol polyprotein from transposon TNT 1-94_DNA integration | Viral protein_DNA-integration | Nucleus | 0.008022891985130906 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | |||||||||||
Pcordatum_s19245_g84463 | A0A7S0A5X2, Hypothetical protein, O13535, DNA-directed DNA polymerase;Hydrolases acting on peptide bonds (peptidases) aspartic endopeptidases;ribonuclease H;RNA-directed DNA polymerase | Transposon Ty1-H Gag-Pol polyprotein_Viral DNA-directed DNA polymerase_Transposon Ty1-H Gag-Pol polyprotein_DNA integration | Viral protein_DNA-integration | Nucleus | 0 | 0.008698631184635859 | 0 | 0.002997798598798446 | 0 | 1 | 0 | 1 | |||||||||||
Pcordatum_s279_g7787 | A0A7S3M3V3, Hypothetical protein (Fragment), P12502, DNA-directed DNA polymerase;retroviral ribonuclease H;Transferases transferring phosphorus-containing groups nucleotidyltransferases;Hydrolases acting on ester bonds;exoribonuclease H;HIV-1 retropepsin;RNA-directed DNA polymerase | Gag-Pol polyprotein_Viral DNA-directed DNA polymerase_DNA integration | Viral protein_DNA-integration | Nucleus | 0 | 0.0068999169222386395 | 0 | 0 | 0 | 1 | 0 | 0 | |||||||||||
Pcordatum_s2396_g33223 | O19048, Poly(rC)-binding protein 1 (Alpha-CP1) (Heterogeneous nuclear ribonucleoprotein E1) (hnRNP E1) | Poly(rC)-binding protein 1_Ribonucleoprotein_viral RNA genome replication | Ribonucleoprotein_viral RNA genome replication | Nucleus | 0 | 0.014524786237145659 | 0 | 0.005102481994918314 | 0 | 1 | 0 | 1 | |||||||||||
Pcordatum_s2734_g35849 | Q15366, Poly(rC)-binding protein 2 (Alpha-CP2) (Heterogeneous nuclear ribonucleoprotein E2) (hnRNP E2), Q28K17, polyribonucleotide nucleotidyltransferase | Poly(rC)-binding protein 2_viral RNA genome replication_Single-stranded nucleic acid binding protein | Viral protein_DNA replication | Nucleus | 0.07488032519455512 | 0.12196368786346083 | 0 | 0.002643174894461171 | 1 | 1 | 0 | 1 | |||||||||||
Pcordatum_s17111_g82438 | A0A1Q9ERZ7, LINE-1 retrotransposable element ORF2 protein, P11369, RNA-directed DNA polymerase;Hydrolases acting on ester bonds endodeoxyribonucleases producing 5\'-phosphomonoesters | RNA-directed DNA polymerase_DNA recombination | DNA-recombination/replication/integration_DNA-polymerase_RNA-directed | Nucleus | 0 | 6.331569906924368E-4 | 0 | 0 | 0 | 1 | 0 | 0 | |||||||||||
Sum | 0.11633193378439813 | 0.15345370863535152 | 0.016455358961901926 | 0.013179651009773995 | 5 | 7 | 2 | 5 | |||||||||||||||
7.06954701223682 | 11.643230046193988 | ||||||||||||||||||||||
Further proteins related to replication | |||||||||||||||||||||||
Pcordatum_s318_g8612 | P34730, Protein BMH2 | BMH2_DNA damage checkpoint signaling_DNA replication initiation | DNA-recombination/replication/integration_damage-checkpoint signaling | Nucleus | 0.07488032519455512 | 0.10187542309332108 | 0.02350765565985989 | 0.04160762395873918 | 1 | 1 | 1 | 1 | |||||||||||
Pcordatum_s2433_g33523 | P34730, Protein BMH2 | BMH2_DNA damage checkpoint signaling_DNA replication initiation | DNA-recombination/replication/integration_damage-checkpoint signaling | Nucleus | 0.041451608589843016 | 0.04864119519124791 | 0 | 0.02616725060159772 | 1 | 1 | 0 | 1 | |||||||||||
Sum | 0.041451608589843016 | 0.04864119519124791 | 0 | 0.02616725060159772 | 9 | 15 | 4 | 11 | |||||||||||||||
Nuclei | 1.8588576970435702 |
A
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relative share | No. of proteins | relative share | No. of proteins | |||||||||||||||||||
Accession | Protein function | Protein function (translated) | Biological process | Kategory | Nuclei_geLC | Nuclei_SG | Cell_geLC | Cell_SG | Nuclei_geLC | Nuclei_SG | Cell_geLC | Cell_SG | Nuclei_geLC | Nuclei_SG | Cell_geLC | Cell_SG | Nuclei_geLC | Nuclei_SG | Cell_geLC | Cell_SG | ||
Sum total | 1.178027973150055 | 0.4755356214522492 | 0.12615775204124807 | 0.20463942911944605 | 17 | 27 | 7 | 23 | ||||||||||||||
NER/BER | 9.337737507917003 | 2.323773201960428 | ||||||||||||||||||||
Pcordatum_s2841_g36691 | Q9DE27, RuvB-like 2 (EC 3.6.4.12) (Reptin), Q9DE27, DNA helicase | DNA helicase_RuvB-like 2_ core component of the chromatin remodeling INO80 complex | DNA-recombination/replication/repair_DNA helicase | Nucleus | 0.014708635306073328 | 0.0011770054147993243 | 0.006268708175962638 | 0 | 1 | 1 | 1 | 0 | ||||||||||
Pcordatum_s19050_g84322 | Q9DE27, RuvB-like 2 (EC 3.6.4.12) (Reptin), Q9DE27, DNA helicase | DNA helicase_RuvB-like 2_ core component of the chromatin remodeling INO80 complex | DNA-recombination/replication/repair_DNA helicase | Nucleus | 0 | 0.030866484861557 | 0 | 0.01027383905693486 | 0 | 1 | 0 | 1 | ||||||||||
Pcordatum_s11019_g71801 | A0A5A8D0A9, RRM domain-containing protein | ATP-dependent DNA helicase RRM3_DNA duplex unwinding_DNA-repair/replication | DNA-recombination/replication/integration | Nucleus | 0.013371486641884844 | 0.062215836303289154 | 0 | 0.0010388530361227534 | 1 | 1 | 0 | 1 | ||||||||||
Pcordatum_s639_g14175 | A0A1Q9ELG4, RRM domain-containing protein | ATP-dependent DNA helicase RRM3_DNA duplex unwinding_DNA-repair/replication | DNA-recombination/replication/integration | Nucleus | 0.01872008129863878 | 0.03983975547647867 | 0 | 0.002041716212238817 | 1 | 1 | 0 | 1 | ||||||||||
Pcordatum_s87_g3177 | A0A7S3M0Y9, Hypothetical protein, Q97VY9, DNA helicase | ATP-dependent DNA helicase Hel308_DNA damage,_DNA repair | DNA-repair/damage | Nucleus | 0 | 0 | 0 | 0.003921508196708842 | 0 | 0 | 0 | 1 | ||||||||||
Pcordatum_s1974_g29482 | A0A813DR07, Hypothetical protein (Fragment), Q8VEG4, exodeoxyribonuclease I | Double-strand break repair_Exonuclease 3'-5' domain-containing protein 2_DNA double-strand break processing | DNA-repair/damage_DNA double-strand break processing | Nucleus | 0 | 0.012416196334557957 | 0 | 0 | 0 | 1 | 0 | 0 | ||||||||||
Pcordatum_s4077_g44895 | A0A516AG34, NAD(P)(+)--arginine ADP-ribosyltransferase (EC 2.4.2.31) (Mono(ADP-ribosyl)transferase) (Fragment), O88554, Transferases glycosyltransferases pentosyltransferases;NAD+ ADP-ribosyltransferase | Double-strand break repair_Base-excision repair_Poly [ADP-ribose] polymerase 2 | DNA-repair/damage_base-excision repair | Nucleus | 0.017382932634450298 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | ||||||||||
Pcordatum_s859_g17303 | A0A812S7M1, Fan1 protein, Q5XVJ4, phosphodiesterase I | Homologous chromosome pairing at meiosis_interstrand cross-link repair | DNA-repair/damage | Nucleus | 0.05883454122429331 | 0.07273884763161081 | 0 | 0.003333055900242675 | 1 | 1 | 0 | 1 | ||||||||||
Pcordatum_s8716_g65340 | A0A7S2DKF4, Hypothetical protein (Fragment), A8LK52, DNA ligase (NAD+) | DNA ligase_DNA repair | DNA-recombination/replication/integration_DNA-polymerase_RNA-directed | Nucleus | 0.0681945818736127 | 0.0016923748610244097 | 0 | 0 | 1 | 1 | 0 | 0 | ||||||||||
Pcordatum_s1190_g21413 | A0A812U9D2, Parp1 protein, P27008, Transferases glycosyltransferases pentosyltransferases;NAD+ ADP-ribosyltransferase | Poly [ADP-ribose] polymerase 1 protein_base-excision repair | DNA repair/damage | Nucleus | 0 | 0.0019068879767547755 | 0 | 0 | 0 | 1 | 0 | 0 | ||||||||||
Sum | 0.19121225897895328 | 0.2228533888600721 | 0.006268708175962638 | 0.020608972402247946 | 6 | 8 | 1 | 5 | ||||||||||||||
30.502657582970077 | 10.813415851620245 | |||||||||||||||||||||
RNA helicase | ||||||||||||||||||||||
Pcordatum_s9436_g67583 | A0A7S1WQ66, Hypothetical protein, Q9VNV3, RNA helicase | Exonuclease_RNA helicase Ddx1_DEAD-box ATP-dependent_DNA duplex unwinding_double-strand break repair | RNA helicase_DNA duplex unwinding_double strand break repair | Nucleus | 0.23801246222555023 | 0.026466743787780835 | 0.014888181917911265 | 0.01473971649294087 | 1 | 1 | 1 | 1 | ||||||||||
Pcordatum_s2971_g37619 | A0A7S0FSP9, Hypothetical protein, Q9VNV3, RNA helicase | Exonuclease_RNA helicase Ddx1_DEAD-box ATP-dependent_DNA duplex unwinding_double-strand break repair | RNA helicase_DNA duplex unwinding_double strand break repair | Nucleus | 0.14307490706816783 | 0.013649463681221535 | 0 | 0.029981000214115677 | 1 | 1 | 0 | 1 | ||||||||||
Pcordatum_s1870_g28486 | A0A7S1F1H0, Hypothetical protein (Fragment), Q90WU3, RNA helicase | Exonuclease_RNA helicase Ddx1_DEAD-box ATP-dependent_DNA duplex unwinding_double-strand break repair | RNA helicase_DNA duplex unwinding_double strand break repair | Nucleus | 0.10162329847832481 | 0.023408081262578234 | 0 | 0.013141573798171442 | 1 | 1 | 0 | 1 | ||||||||||
Pcordatum_s2303_g32387 | A0A7S2KVR9, Hypothetical protein (Fragment), A2VD92, RNA helicase | Exonuclease_RNA helicase Ddx1_DEAD-box ATP-dependent_DNA duplex unwinding_double-strand break repair | RNA helicase_DNA duplex unwinding_double strand break repair | Nucleus | 0.04680020324659696 | 0.004122201543909718 | 0 | 0.003220097775975446 | 1 | 1 | 0 | 1 | ||||||||||
Pcordatum_s5494_g52573 | A0A7S4UZF8, Hypothetical protein (Fragment), A2VD92, RNA helicase | Exonuclease_RNA helicase Ddx1_DEAD-box ATP-dependent_DNA duplex unwinding_double-strand break repair | RNA helicase_DNA duplex unwinding_double strand break repair | Nucleus | 0.01872008129863878 | 0.02035761151869091 | 0 | 0.015977207031110597 | 1 | 1 | 0 | 1 | ||||||||||
Pcordatum_s4160_g45392 | A0A7S1F1H0, Hypothetical protein (Fragment), Q90WU3, RNA helicase | Exonuclease_RNA helicase Ddx1_DEAD-box ATP-dependent_DNA duplex unwinding_double-strand break repair | RNA helicase_DNA duplex unwinding_double strand break repair | Nucleus | 0.017382932634450298 | 2.468709768012627E-4 | 0.0023507655659859893 | 0.0030127416248439376 | 1 | 1 | 1 | 1 | ||||||||||
Pcordatum_s1957_g29298 | A0A813JMV3, Hypothetical protein, Q9VNV3, RNA helicase | Exonuclease_RNA helicase Ddx1_DEAD-box ATP-dependent_DNA duplex unwinding_double-strand break repair | RNA helicase_DNA duplex unwinding_double strand break repair | Nucleus | 0.013371486641884844 | 0.0030727642594134256 | 0 | 0.0037927253852527427 | 1 | 1 | 0 | 1 | ||||||||||
Pcordatum_s3047_g38169 | A0A7S0FV17, Hypothetical protein (Fragment), Q9VNV3, RNA helicase | Exonuclease_RNA helicase Ddx1_DEAD-box ATP-dependent_DNA duplex unwinding_double-strand break repair | RNA helicase_DNA duplex unwinding_double strand break repair | Nucleus | 0 | 0.005236202295319822 | 0 | 0.0053241783268690715 | 0 | 1 | 0 | 1 | ||||||||||
Pcordatum_s363_g9492 | A0A7S1F1H0, Hypothetical protein (Fragment), Q90WU3, RNA helicase | Exonuclease_RNA helicase Ddx1_DEAD-box ATP-dependent_DNA duplex unwinding_double-strand break repair | RNA helicase_DNA duplex unwinding_double strand break repair | Nucleus | 0 | 0.002371048914634859 | 0 | 0.006785595724326654 | 0 | 1 | 0 | 1 | ||||||||||
Pcordatum_s3047_g38170 | A0A7S2QHJ2, Hypothetical protein (Fragment), Q9VNV3, RNA helicase | Exonuclease_RNA helicase Ddx1_DEAD-box ATP-dependent_DNA duplex unwinding_double-strand break repair | RNA helicase_DNA duplex unwinding_double strand break repair | Nucleus | 0 | 0 | 0 | 0.0023323705025064126 | 0 | 0 | 0 | 1 | ||||||||||
Sum | 0.5789853715936137 | 0.09893098824035058 | 0.017238947483897253 | 0.09830720687611286 | 7 | 9 | 2 | 10 | ||||||||||||||
33.58588870546991 | 1.0063452251778837 | |||||||||||||||||||||
Double-strand break repair | ||||||||||||||||||||||
Pcordatum_s7354_g60595 | Q6XJU9, Osteoclast-stimulating factor 1 (Osteoclast-stimulating factor-like), Q9TXQ1, NAD+ ADP-ribosyltransferase;Transferases glycosyltransferases pentosyltransferases | Double-strand break repair_cellular response to DNA damage stimulus | DNA-repair/damage | Nucleus | 0 | 0 | 0.004701531131971979 | 0 | 0 | 0 | 1 | 0 | ||||||||||
Pcordatum_s1963_g29363 | Q6GL04, vesicle-fusing ATPase | Double-strand break repair_Transitional endoplasmic reticulum ATPase | DNA-repair/damage_Autophagy | Nucleus | 0 | 8.839503521765037E-4 | 0 | 0.003225824805624752 | 0 | 1 | 0 | 1 | ||||||||||
Pcordatum_s12793_g75715 | P53041, Serine/threonine-protein phosphatase 5 (PP5) (EC 3.1.3.16) (Protein phosphatase T) (PP-T) (PPT), P53041, protein-serine/threonine phosphatase | Double-strand break repair_Serine/threonine-protein phosphatase 5 | DNA-repair/damage_DNA double-strand break processing | Nucleus | 0.36370443665926777 | 0.10655835889114591 | 0.08854550298547226 | 0.06729561260547394 | 1 | 1 | 1 | 1 | ||||||||||
Pcordatum_s2381_g33121 | O74859, Aprataxin-like protein (EC 3.6.1.71) (EC 3.6.1.72) (Hit family protein 3), P61802, DNA-3\'-diphospho-5\'-guanosine diphosphatase;adenosine-5\'-diphospho-5\'-[DNA] diphosphatase | Double-strand break repair_mismatch repair | DNA-repair/damage_DNA double-strand break processing | Nucleus | 0.01203433797769636 | 0.005831810246692032 | 0 | 0.0014280273074890645 | 1 | 1 | 0 | 1 | ||||||||||
Sum | 0.37573877463696415 | 0.11327411949001445 | 0.09324703411744424 | 0.07194946471858775 | 2 | 3 | 2 | 3 | ||||||||||||||
4.02949839845547 | 1.5743566673227898 | |||||||||||||||||||||
Further proteins involved in DNA repair | ||||||||||||||||||||||
Pcordatum_s1820_g28008 | Q08E38, RING-type E3 ubiquitin transferase | Pre-mRNA-processing factor 19_DNA damage checkpoint signaling/PRP19C/Prp19 complex | DNA-repair/damage_Ubiquitin conjugation pathway | Nucleus | 0 | 0.005393242687611021 | 0 | 0 | 0 | 1 | 0 | 0 | ||||||||||
Pcordatum_s2100_g30583 | A0A7S3X8A6, Hypothetical protein (Fragment), Q5ZMA2, RING-type E3 ubiquitin transferase | Pre-mRNA-processing factor 19_DNA damage checkpoint signaling/PRP19C/Prp19 complex | DNA-repair/damage_Ubiquitin conjugation pathway | Nucleus | 0 | 0.003752221339910646 | 0 | 0 | 0 | 1 | 0 | 0 | ||||||||||
Pcordatum_s1542_g25226 | A0A812KZ61, POC1B protein, Q5ZMA2, RING-type E3 ubiquitin transferase | Pre-mRNA-processing factor 19_DNA repair, PRP19C/Prp19 complex | DNA-repair/damage_Ubiquitin conjugation pathway | Nucleus | 0.004011445992565453 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | ||||||||||
Pcordatum_s3608_g41991 | Q96FW1, Ubiquitin thioesterase OTUB1 (EC 3.4.19.12) (Deubiquitinating enzyme OTUB1) (OTU domain-containing ubiquitin aldehyde-binding protein 1) (Otubain-1) (hOTU1) (Ubiquitin-specific-processing protease OTUB1), Q96FW1, ubiquitinyl hydrolase 1 | Ubiquitin thioesterase OTUB1_non-catalytic role in DNA repair _cellular response to DNA damage stimulus_DNA repair | DNA_repair_Ubiquitin_Ubl conjugation pathway | Nucleus | 0 | 0 | 0 | 0.0024074548754349423 | 0 | 0 | 0 | 1 | ||||||||||
Pcordatum_s3474_g41099 | Q99NB8, Ubiquilin-4 (Ataxin-1 interacting ubiquitin-like protein) (A1Up) (Ataxin-1 ubiquitin-like-interacting protein A1U) (Connexin43-interacting protein of 75 kDa) (CIP75), Q9JK66, RBR-type E3 ubiquitin transferase | Ubiquilin_Regulator of protein degradation_DNA repair | DNA_repair_Ubiquitin_Ubl conjugation pathway | Nucleus | 0 | 0.003980386674416835 | 0 | 0 | 0 | 1 | 0 | 0 | ||||||||||
Pcordatum_s7698_g61890 | O74803, UV excision repair protein rhp23 (RAD23 homolog) | Repair protein rhp23_nucleotide-excision repair | DNA-repair/damage | Nucleus | 0 | 0.0011921584351081242 | 0 | 0 | 0 | 1 | 0 | 0 | ||||||||||
Pcordatum_s5695_g53602 | Q28811, Deoxyribodipyrimidine photo-lyase (EC 4.1.99.3) (DNA photolyase) (Photoreactivating enzyme), Q28811, deoxyribodipyrimidine photo-lyase | Deoxyribodipyrimidine photo-lyase_protein-chromophore linkage | DNA-repair/damage | Nucleus | 0.028080121947958173 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | ||||||||||
Pcordatum_s617_g13856 | Q10301, UPF0652 protein C22H10.08, Q8K1E6, mRNA N1-methyladenine demethylase | DNA-dealkylation_oxidative single-stranded DNA demethylation | DNA-repair/damage | Nucleus | 0 | 0 | 0.007835885219953298 | 0 | 0 | 0 | 1 | 0 | ||||||||||
Pcordatum_s6331_g56483 | A0A7S1WQN9, Sugar phosphate phosphatase (EC 3.1.3.-) (Fragment), O94725, Hydrolases acting on ester bonds phosphoric-monoester hydrolases | Damage-control phosphatase_regulation of response to DNA damage stimulus | DNA-repair/damage_regulation of response to DNA damage stimulus | Nucleus | 0 | 0.016164865052482328 | 0.0015671770439906595 | 0.004025370893625133 | 0 | 1 | 1 | 1 | ||||||||||
Pcordatum_s4874_g49461 | A0A7S2N0P4, Hypothetical protein (Fragment), Q54VI1, non-specific serine/threonine protein kinase | DNA damage checkpoint signaling_Kinase, Serine/threonine-protein kinase, Transferase | DNA-repair/damage_regulation of response to DNA damage stimulus | Nucleus | 0 | 0.008877277318802763 | 0 | 0 | 0 | 1 | 0 | 0 | ||||||||||
Pcordatum_s5221_g51203 | Q54MH0, non-specific serine/threonine protein kinase | DNA damage checkpoint signaling_Kinase, Serine/threonine-protein kinase, Transferase | DNA-repair/damage_regulation of response to DNA damage stimulus | Nucleus | 0 | 0.0011169733534802505 | 0 | 0.004638215815058145 | 0 | 1 | 0 | 1 | ||||||||||
Pcordatum_s11304_g72503 | Q90WU3, ATP-dependent RNA helicase DDX1 (EC 3.6.4.13) (DEAD box protein 1), Q90WU3, RNA helicase | RNA helicase DDX1_ATP-dependent_DNA duplex unwinding_DNA repair_double-strand break repair | DNA repair/damage | Nucleus | 0 | 0 | 0 | 0.0017363374273202433 | 0 | 0 | 0 | 1 | ||||||||||
Pcordatum_s8954_g66098 | A0A7S1WBK9, Hypothetical protein (Fragment), Q9EPU0, Hydrolases acting on acid anhydrides acting on acid anhydrides to facilitate cellular and subcellular movement | RNA-helicase_Regulator of nonsense transcripts 1_Nonsense-mediated mRNA decay_DNA repair | DNA repair/damage | Nucleus | 0 | 0 | 0 | 9.664061110590356E-4 | 0 | 0 | 0 | 1 | ||||||||||
Sum | 0.032091567940523626 | 0.04047712486181197 | 0.009403062263943957 | 0.013773785122497498 | 2 | 7 | 2 | 5 | ||||||||||||||
3.4128847645281204 | 2.9387074432937395 |
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Pcordatum_s19360_g84552 | Q9QZH3, peptidylprolyl isomerase | Peptidyl-prolyl cis-trans isomerase E_accelerate the folding of proteins_rotamase_positive regulation of viral genome replication_RNA-binding | mRNA-processing/splicing | Nucleus | 0 | 0 | 0 | 0.010277380772639035 | 0 | 0 | 0 | 1 | ||||||||||
Pcordatum_s7491_g61116 | Q44556, Putative RNA-binding protein RbpD, Q5ARI5, peptidylprolyl isomerase | Peptidyl-prolyl cis-trans isomerase E_accelerate the folding of proteins_rotamase_regulation of phosphorylation of RNA polymerase II C-terminal domain_RNA-binding | mRNA-processing/splicing | Nucleus | 0 | 0.0030788907197775105 | 0 | 0.0021572816421095453 | 0 | 1 | 0 | 1 | ||||||||||
Pcordatum_s2323_g32576 | A0A3M2AFA4, RNA-binding protein, Q871A4, peptidylprolyl isomerase | Peptidyl-prolyl cis-trans isomerase E_accelerate the folding of proteins_rotamase_regulation of phosphorylation of RNA polymerase II C-terminal domain_RNA-binding | mRNA-processing_regulation of phosphorylation of RNA polymerase II C-terminal domain | Nucleus | 0.005348594656753938 | 0.03658330615987699 | 0 | 0.0026517654389351295 | 1 | 1 | 0 | 1 | ||||||||||
Pcordatum_s1132_g20689 | Q5JQF8, Polyadenylate-binding protein 1-like 2 (RNA-binding motif protein 32) (RNA-binding protein 32), Q4G338, peptidylprolyl isomerase | Polyadenylate-binding protein_Peptidyl-prolyl cis-trans isomerase E_Spliceosome component_protein folding_rotamase_RNA-binding | mRNA-processing/splicing_mRNA-transport | Nucleus | 0 | 0 | 0 | 0.04927656879307928 | 0 | 0 | 0 | 1 | ||||||||||
Pcordatum_s1465_g24399 | Q5JQF8, Polyadenylate-binding protein 1-like 2 (RNA-binding motif protein 32) (RNA-binding protein 32), Q9QZH3, peptidylprolyl isomerase | Polyadenylate-binding protein_Peptidyl-prolyl cis-trans isomerase E_Spliceosome component_protein folding_rotamase_RNA-binding | mRNA-processing/splicing_mRNA-transport | Nucleus | 0 | 0 | 0 | 0.008978400021392552 | 0 | 0 | 0 | 1 | ||||||||||
Pcordatum_s12286_g74696 | Q54BM2, Polyadenylate-binding protein 1-A (PABP-1-A) (Poly(A)-binding protein, cytoplasmic 1-A), Q8WUA2, peptidylprolyl isomerase | Polyadenylate-binding protein_Peptidyl-prolyl cis-trans isomerase E_Spliceosome component_protein folding_rotamase_RNA-binding | mRNA-processing/splicing_posttranscriptional base modification | Nucleus | 0 | 0 | 0 | 0.004360228810106976 | 0 | 0 | 0 | 1 | ||||||||||
Pcordatum_s2072_g30328 | P31209, Polyadenylate-binding protein, cytoplasmic and nuclear (PABP) (Poly(A)-binding protein) (Polyadenylate tail-binding protein), Q9UNP9, peptidylprolyl isomerase | Polyadenylate-binding protein_Peptidyl-prolyl cis-trans isomerase E_Spliceosome component_protein folding_rotamase_RNA-binding_mRNA 3'-end processing | mRNA-processing/splicing_mRNA-transport | Nucleus | 0 | 0.0012625946036727133 | 0 | 0.02865685067467356 | 0 | 1 | 0 | 1 | ||||||||||
Pcordatum_s4867_g49412 | Q6P4J8, WD40 repeat-containing protein SMU1 (Smu-1 suppressor of mec-8 and unc-52 protein homolog), P49695, non-specific serine/threonine protein kinase | SMU1_component of the spliceosome_Required for normal accumulation of ik | mRNA-processing_splicing | Nucleus | 0 | 0.0020162942334341015 | 0 | 0 | 0 | 1 | 0 | 0 | ||||||||||
Sum | 0.9132725376407348 | 3.971487022829767 | 0.025858421225845883 | 0.36382266282025416 | 21 | 45 | 3 | 35 | ||||||||||||||
35.318186275344026 | 10.915996799220482 | |||||||||||||||||||||
rRNA processing - exosome | ||||||||||||||||||||||
Pcordatum_s10527_g70535 | Q2KID0, Exosome complex component RRP4 (Exosome component 2) (Ribosomal RNA-processing protein 4) | Exosome complex component RRP4_component of the RNA exosome complex_RNA-binding_rRNA-processing | rRNA-processing_splicing | Nucleus | 0 | 0.006854530363801756 | 0 | 0 | 0 | 1 | 0 | 0 | ||||||||||
Pcordatum_s2020_g29862 | Q7KWX9, Putative exosome complex component rrp40 (Exosome component 3) (Ribosomal RNA-processing protein 40) | Exosome complex component RRP40_component of the RNA exosome complex_RNA-binding_rRNA-processing | rRNA-processing_splicing | Nucleus | 0 | 2.2655577923893857E-4 | 0 | 0 | 0 | 1 | 0 | 0 | ||||||||||
Pcordatum_s18195_g83581 | Q9SP08, Exosome complex component RRP41 homolog (Ribosomal RNA-processing protein 41) (AtRRP41) (AtRrp41p) | Exosome complex component RRP41_component of the RNA exosome complex_RNA-binding_rRNA-processing | rRNA-processing_splicing | Nucleus | 0 | 0.0030915061529532576 | 0 | 0 | 0 | 1 | 0 | 0 | ||||||||||
Pcordatum_s1107_g20420 | Q54VM4, Putative exosome complex exonuclease RRP42 (Exosome component 7) (Ribosomal RNA-processing protein 42) | Exosome complex component RRP42_component of the RNA exosome complex_RNA-binding_rRNA-processing | rRNA-processing_splicing | Nucleus | 0 | 0.0036325922322095936 | 0 | 0 | 0 | 1 | 0 | 0 | ||||||||||
Sum | 0 | 0.013805184528203547 | 0 | 0 | 0 | 4 | 0 | 0 | ||||||||||||||
Nuclei | ||||||||||||||||||||||
Further proteins involved | ||||||||||||||||||||||
Pcordatum_s31_g1346 | Q54B65, Splicing factor 3A subunit 2 | Splicing factor 3A subunit 2_component of the splicing factor SF3A complex | mRNA-processing_splicing | Nucleus | 0 | 0.007125254659653714 | 0 | 0.004316145752937977 | 0 | 1 | 0 | 1 | ||||||||||
Pcordatum_s2641_g35160 | O57683, Splicing factor 3B subunit 1 (146 kDa nuclear protein) (Pre-mRNA-splicing factor SF3b 155 kDa subunit) (SF3b155) (Spliceosome-associated protein 155) (SAP 155), Q9JLN9, non-specific serine/threonine protein kinase | Splicing factor 3B subunit 1_component of the splicing factor SF3B complex | mRNA-processing_splicing | Nucleus | 0 | 9.517401798737668E-5 | 0 | 0.0017634353202398533 | 0 | 1 | 0 | 1 | ||||||||||
Pcordatum_s3214_g39346 | A0A2T6J5B4, Putative splicing factor 3b, subunit 3 (Fragment) | Splicing factor 3B subunit 3_Component of the spliceosome C complex | mRNA-processing_splicing | Nucleus | 0 | 0.0034116046441654674 | 0 | 0.002332860314252735 | 0 | 1 | 0 | 1 | ||||||||||
Pcordatum_s4979_g49996 | Q9VHI4, Splicing factor 3B subunit 5 (Pre-mRNA-splicing factor SF3b 10 kDa subunit) | Splicing factor 3B subunit 5_Component of the spliceosome C complex | mRNA-processing_splicing | Nucleus | 0 | 0.029071323221146052 | 0 | 0.006694219459158915 | 0 | 1 | 0 | 1 | ||||||||||
Pcordatum_s7821_g62338 | P59708, Splicing factor 3B subunit 6 (Pre-mRNA branch site protein p14) (SF3b 14 kDa subunit), Q32LC7, RNA helicase;DNA helicase | Splicing factor 3B subunit 6_RNA-binding | mRNA-processing/splicing | Nucleus | 0.11900623111277511 | 0.2378487670059179 | 7.835885219953298E-4 | 0.02065649167720653 | 1 | 1 | 1 | 1 | ||||||||||
Pcordatum_s252_g7229 | Q6AYB3, Pre-mRNA-splicing factor ISY1 homolog | Splicing factor ISY1 homolog pre-mRNA_Component of the spliceosome C complex | mRNA-processing_splicing | Nucleus | 0.004011445992565453 | 0.02071439626959811 | 0 | 0 | 1 | 1 | 0 | 0 | ||||||||||
Pcordatum_s979_g18851 | P32524, Pre-mRNA-splicing factor PRP21 | Splicing factor PRP21_Pre-mRNA_necessary for binding of the U2 snRNP to the pre-mRNA | mRNA-processing_splicing | Nucleus | 0 | 0.006592651371670725 | 0 | 0.005478431349133926 | 0 | 1 | 0 | 1 | ||||||||||
Pcordatum_s2451_g33663 | Q5WR10, Spliceosome RNA helicase DDX39B (EC 3.6.4.13) (56 kDa U2AF65-associated protein) (DEAD box protein UAP56), Q5WR10, RNA helicase | Splicing factor that is required for the first ATP-dependent step in spliceosome assembly and for the interaction of U2 snRNP with the branchpoint_nuclear export of spliced and unspliced mRNA_RNA-binding | mRNA splicing_RNA helicase_nuclear export | Nucleus | 0 | 4.262783871080835E-4 | 0 | 0 | 0 | 1 | 0 | 0 | ||||||||||
Pcordatum_s3224_g39406 | C8VBH3, Pre-mRNA-splicing factor cef1 | Splicing factor_Involved in pre-mRNA splicing and cell cycle control_DNA-binding | mRNA-processing_splicing | Nucleus | 0 | 0.0013737771713451764 | 0 | 0 | 0 | 1 | 0 | 0 | ||||||||||
Pcordatum_s5523_g52740 | A0A813CNK3, Srp2 protein (Fragment) | Splicing factor_RNA-binding | mRNA-processing/splicing | Nucleus | 0 | 0.013462240502544912 | 0 | 0 | 0 | 1 | 0 | 0 | ||||||||||
Pcordatum_s2335_g32676 | A0A7S4WBT1, Hypothetical protein, O94480, Transferases transferring one-carbon groups methyltransferases | 25S rRNA (uridine-N(3))-methyltransferase_rRNA base methylation | rRNA-processing_rRNA base methylation | Nucleus | 0 | 0.0012938794278987765 | 0 | 0 | 0 | 1 | 0 | 0 | ||||||||||
Pcordatum_s3312_g40003 | A0A7S4WBT1, Hypothetical protein, O94480, Transferases transferring one-carbon groups methyltransferases | 25S rRNA (uridine-N(3))-methyltransferase_rRNA base methylation | rRNA-processing_rRNA base methylation | Nucleus | 0 | 0.0011643174791340612 | 0 | 0 | 0 | 1 | 0 | 0 | ||||||||||
Pcordatum_s7490_g61112 | A0A7S4VZ85, Hypothetical protein, O94480, Transferases transferring one-carbon groups methyltransferases | 25S rRNA (uridine-N(3))-methyltransferase_rRNA base methylation | rRNA-processing_rRNA base methylation | Nucleus | 0 | 5.709136034431317E-4 | 0 | 0.0012693358372459983 | 0 | 1 | 0 | 1 | ||||||||||
Pcordatum_s420_g10523 | A0A7S2Q2T7, Hypothetical protein, O94480, Transferases transferring one-carbon groups methyltransferases | 25S rRNA (uridine-N(3))-methyltransferase_rRNA base methylation | rRNA-processing_rRNA base methylation | Nucleus | 0 | 4.3011376880346873E-4 | 0 | 0.0014033860088663935 | 0 | 1 | 0 | 1 | ||||||||||
Pcordatum_s840_g17018 | Q9FEF8, rRNA 2'-O-methyltransferase fibrillarin 1 (AtFbr1) (AtFib1) (EC 2.1.1.-) (Fibrillarin-like protein 1) (Histone-glutamine methyltransferase) (SKP1-interacting partner 7), Q9FEF8, Transferases transferring one-carbon groups methyltransferases | Methyltransferase_Ribonucleoprotein_rRNA processing/methylation | rRNA-processing/splicing_RNA-processing box C/D RNA 3'-end processing | Nucleus | 0.18720081298638783 | 0.19985383737516849 | 0 | 0.010769076410293248 | 1 | 1 | 0 | 1 | ||||||||||
Pcordatum_s2974_g37645 | A0A7S4UVS2, Hypothetical protein, Q00416, Hydrolases acting on acid anhydrides acting on acid anhydrides to facilitate cellular and subcellular movement | Helicase SEN1_DNA-templated transcription, termination | mRNA-processing/Helicase | Nucleus | 0.004011445992565453 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | ||||||||||
Pcordatum_s1405_g23780 | A0A813BMM9, Hypothetical protein, Q9SJF3, Hydrolases | Hydrolase_mRNA-decapping enzyme-like protein | mRNA-processing/splicing | Nucleus | 0.002674297328376969 | 0.010295281008752571 | 0 | 0.005371275610169284 | 1 | 1 | 1 | 1 | ||||||||||
Pcordatum_s10593_g70715 | Q55578, Uncharacterized RNA pseudouridine synthase slr0361 (EC 5.4.99.-) (RNA pseudouridylate synthase) (RNA-uridine isomerase), P35159, 23S rRNA pseudouridine2605 synthase | Isomerase_RNA pseudouridine synthesis_RNA-binding | mRNA-processing/splicing_posttranscriptional base modification | Nucleus | 0.004011445992565453 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | ||||||||||
Pcordatum_s3869_g43582 | Q07538, Serine/threonine-protein kinase prp4 (EC 2.7.11.1), Q61136, non-specific serine/threonine protein kinase | Kinase/Transferase_role in pre-mRNA splicing and is essential for growth | mRNA-processing_splicing | Nucleus | 0.002674297328376969 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | ||||||||||
Pcordatum_s11905_g73867 | Q13523, non-specific serine/threonine protein kinase | Kinase_role in pre-mRNA splicing. Phosphorylates SF2/ASF | mRNA-processing_splicing | Nucleus | 0 | 0.0018628064631291757 | 0 | 0 | 0 | 1 | 0 | 0 | ||||||||||
Pcordatum_s713_g15264 | A0A812REG8, FlpA protein (Fragment), Q24957, Transferases transferring one-carbon groups methyltransferases | Methyltransferase_Ribonucleoprotein_rRNA processing/methylation | Ribonucleoprotein_rRNA-processing_methylation | Nucleus | 0 | 0 | 0 | 0.002247587857000703 | 0 | 0 | 0 | 1 | ||||||||||
Pcordatum_s2387_g33161 | Q0VCU0, Poly(rC)-binding protein 4 (Alpha-CP4) | DNA/RNA_Poly(rC)-binding protein 4_binding protein_Single-stranded nucleic acid binding protein_ | Ribonucleoprotein_mRNA-processing/splicing_DNA/RNA-binding | Nucleus | 0 | 0.004427147014813128 | 0 | 0 | 0 | 1 | 0 | 0 | ||||||||||
Pcordatum_s4759_g48854 | Q55G91, MYG1 protein, Q9JK81, Hydrolases acting on ester bonds | Exonuclease_MYG1 protein | Ribonucleoprotein_Nuclease activity | Nucleus | 0.020057229962827265 | 0.06270667815731104 | 0 | 0.004310170049632847 | 1 | 1 | 0 | 1 | ||||||||||
Pcordatum_s2531_g34283 | Q55G91, MYG1 protein, Q9JK81, Hydrolases acting on ester bonds | Exonuclease_MYG1 protein | Ribonucleoprotein_Nuclease activity | Nucleus | 0 | 0.005544990398167569 | 0 | 0 | 0 | 1 | 0 | 0 | ||||||||||
Pcordatum_s7561_g61378 | Q4L6I1, 30S ribosomal protein S1, Q895G2, 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase | Ribonucleoprotein_30S ribosomal protein S1_RNA-binding | Ribonucleoprotein | Nucleus | 0 | 0.002087955694071508 | 0 | 0.0023306900714382614 | 0 | 1 | 0 | 1 | ||||||||||
Pcordatum_s2449_g33650 | A0A287TNZ8, Endo/exonuclease/phosphatase domain-containing protein | Ribonucleoprotein_Exonuclease_catalytic activity | Ribonucleoprotein_Exonuclease_catalytic activity | Nucleus | 0 | 0.001907685504139449 | 0 | 0.002252907966122295 | 0 | 1 | 0 | 1 | ||||||||||
Pcordatum_s2590_g34751 | Q5ZI72, Heterogeneous nuclear ribonucleoprotein D-like (hnRNP D-like) (hnRNP DL), Q6Q151, peptidylprolyl isomerase | Nuclear ribonucleoprotein D_transcriptional regulator_binds DNA and RNA | Transcription_Ribonucleoprotein_transcription regulation_regulation of gene expression | Nucleus | 0 | 0.0036473102375812988 | 0 | 0 | 0 | 1 | 0 | 0 | ||||||||||
Pcordatum_s3217_g39362 | Q5ZIQ3, Heterogeneous nuclear ribonucleoprotein K (hnRNP K) | Nuclear ribonucleoprotein K_One of the major pre-mRNA-binding proteins | Transcription_Ribonucleoprotein_transcription regulation_regulation of gene expression | Nucleus | 0 | 0.006400809784411946 | 0 | 0.005443059405484135 | 0 | 1 | 0 | 1 | ||||||||||
Pcordatum_s2263_g32011 | A0A812HUH2, Sf3b3 protein, O15910, ribonucleoside-diphosphate reductase | RNR2_precursors necessary for DNA synthesis_DNA replication | mRNA splicing_splicing factors | Nucleus | 0 | 5.382222309204622E-4 | 0 | 0.0023489864240547275 | 0 | 1 | 0 | 1 | ||||||||||
Pcordatum_s1822_g28024 | A0A7S4QRT9, Hypothetical protein (Fragment), Q8L7S3, Transferases transferring one-carbon groups methyltransferases | Zinc finger CCCH domain-containing protein 24_Transferase_RNA-processing | RNA-processing_RNA methylation_DNA-binding | Nucleus | 0 | 0.0047107912542968 | 0 | 0 | 0 | 1 | 0 | 0 | ||||||||||
Pcordatum_s12508_g75140 | A0A812VCW7, TRPT1 protein | rRNA-processing_egulation of protein kinase activity | rRNA-processing_splicing | Nucleus | 0.005348594656753938 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | ||||||||||
Pcordatum_s3935_g43997 | P49964, Signal recognition particle 19 kDa protein (SRP19) | SRP19_Component of the signal recognition particle (SRP) complex_Mediates binding of SRP54 to the SRP complex | Ribonucleoprotein | Nucleus | 0 | 0 | 0 | 4.679209290442651E-4 | 0 | 0 | 0 | 1 | ||||||||||
Pcordatum_s6227_g56044 | A1Z7K9, poly(A)-specific ribonuclease | PAN2-PAN3 deadenylation complex catalytic subunit PAN2 | Ribonuclease_mRNA-processing | Nucleus | 0 | 0.009285393832287141 | 0 | 0 | 0 | 1 | 0 | 0 | ||||||||||
Pcordatum_s14322_g78519 | O94386, Uncharacterized protein C29A10.09c, P69341, poly(A)-specific ribonuclease | Poly(A)-specific ribonuclease PARN_Nonsense-mediated mRNA decay | Ribonuclease_ rRNA/tRNA processing | Nucleus | 0 | 0.0021422165572251243 | 0 | 0 | 0 | 1 | 0 | 0 | ||||||||||
Pcordatum_s593_g13492 | Q29Q26, Ankyrin repeat domain-containing protein 2B, Q9VBP3, Transferases glycosyltransferases pentosyltransferases;NAD+ ADP-ribosyltransferase | Regulation of transcription, protein targeting | Chloroplast_Transcription/Transcription regulation | Nucleus | 0.01203433797769636 | 0.021259252478309267 | 0.007835885219953298 | 0.007782822297577349 | 1 | 1 | 1 | 1 | ||||||||||
Pcordatum_s704_g15127 | P40618, High mobility group protein B3 (High mobility group protein 2a) (HMG-2a) (High mobility group protein 4) (HMG-4) | DNA geometric change_Immunity_Transcription | Transcription_transcription regulation_DNA-binding | Nucleus | 0 | 0 | 0.004701531131971979 | 0 | 0 | 0 | 1 | 0 | ||||||||||
Pcordatum_s7662_g61756 | Q23SI8, Probable alpha-tubulin polyglutamylase Ttll1 (EC 6.-.-.-) (Tubulin-tyrosine ligase family protein 1), Q8CHB8, Ligases | Tubulin polyglutamylase TTLL5_Transcription | Transcription | Nucleus | 0 | 0 | 0 | 2.810765867356645E-4 | 0 | 0 | 0 | 1 | ||||||||||
Pcordatum_s73_g2763 | A0A6T1AMQ0, Hypothetical protein, Q54Y06, cyclin-dependent kinase | Kinase_regulation of transcription involved in G1/S transition of mitotic cell cycle | Transcription_regulation | Nucleus | 0 | 4.26923659264774E-4 | 0 | 0.00487249654110672 | 0 | 1 | 0 | 1 | ||||||||||
Pcordatum_s6_g313 | A0A7S2PKG4, Hypothetical protein (Fragment), F1QCV2, acetylspermidine deacetylase;acetylputrescine deacetylase | Polyamine deacetylase_Histone deacetylase | DNA-recombination/replication/integration | Nucleus | 0 | 0.0021969704373074484 | 0 | 0 | 0 | 1 | 0 | 0 | ||||||||||
Sum | 0.3610301393308909 | 0.662874963617574 | 0.013321004873920605 | 0.09239237586770183 | 10 | 31 | 4 | 20 | ||||||||||||||
27.10232018889979 | 7.174563457127195 |
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49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
relative share | No. of proteins | relative share | No. of proteins | |||||||||||||||||||
Accession | Protein function | Protein function (translated) | Biological process | Kategory | Nuclei_geLC | Nuclei_SG | Cell_geLC | Cell_SG | Nuclei_geLC | Nuclei_SG | Cell_geLC | Cell_SG | Nuclei_geLC | Nuclei_SG | Cell_geLC | Cell_SG | Nuclei_geLC | Nuclei_SG | Cell_geLC | Cell_SG | ||
Sum total | 0.5789853715936137 | 1.7260219976151212 | 0.1363444028271874 | 0.5006180710319132 | 21 | 61 | 7 | 41 | ||||||||||||||
RNA polymerase II constituents | 4.246491675404241 | 3.4477820468152682 | ||||||||||||||||||||
Pcordatum_s5255_g51380 | Q54DH7, DNA-directed RNA polymerase II subunit rpb3 (RNA polymerase II subunit 3) (RNA polymerase II subunit B3) (DNA-directed RNA polymerase II subunit C), O28002, DNA-directed RNA polymerase | Rpb3_DNA-directed RNA polymerase II subunit polr2c_transcription by RNA polymerase II | Transcription/RNA polymerase | Nucleus | 0.005348594656753938 | 0.020466800267901687 | 0 | 0 | 1 | 1 | 0 | 0 | ||||||||||
Pcordatum_s1739_g27204 | A8XGH1, DNA-directed RNA polymerases I, II, and III subunit RPABC1 (RNA polymerases I, II, and III subunit ABC1) (RPB5 homolog), P31815, DNA-directed RNA polymerase | Rpb5_RPABC1_DNA-directed RNA polymerases I, II, and III subunit RPABC1_Rpb5_transcription, DNA-templated | Transcription/RNA polymerase | Nucleus | 0 | 0.01322235151548402 | 0 | 0 | 0 | 1 | 0 | 0 | ||||||||||
Pcordatum_s2294_g32292 | Q923G2, DNA-directed RNA polymerases I, II, and III subunit RPABC3 (RNA polymerases I, II, and III subunit ABC3) (DNA-directed RNA polymerase II subunit H) (RPB17) (RPB8 homolog) | Rpb5_RpABC3_DNA-directed RNA polymerases I, II, and III subunit RPABC3_Polr2h_transcription, DNA-templated | Transcription/RNA polymerase | Nucleus | 0 | 0.012095517823429621 | 0 | 0 | 0 | 1 | 0 | 0 | ||||||||||
Pcordatum_s766_g16002 | A0A812TRV7, POLR2I protein | Rpb9_DNA-directed RNA polymerase II subunit RPB9_POLR2I | Transcription/RNA polymerase | Nucleus | 0 | 0.014593591099696141 | 0 | 0 | 0 | 1 | 0 | 0 | ||||||||||
Pcordatum_s348_g9186 | O08740, DNA-directed RNA polymerase II subunit RPB11 (RNA polymerase II subunit B11) (DNA-directed RNA polymerase II subunit J) (RNA polymerase II 13.3 kDa subunit) (RPB14), Q980K0, DNA-directed RNA polymerase | Rpb11_DNA-directed RNA polymerase II subunit RPB11_Polr2j_transcription | Transcription/RNA polymerase | Nucleus | 0 | 0.00411719887213313 | 0 | 0 | 0 | 1 | 0 | 0 | ||||||||||
Pcordatum_s771_g16064 | P20290, Transcription factor BTF3 (Nascent polypeptide-associated complex subunit beta) (NAC-beta) (RNA polymerase B transcription factor 3) | BTF3_transcription factor_form a stable complex with RNA polymerase II. Required for the initiation of transcription | Transcription/Transcription factors/regulation_chromatin-binding/RNA-binding | Nucleus | 0 | 0 | 0 | 0.01733277987797062 | 0 | 0 | 0 | 1 | ||||||||||
Pcordatum_s643_g14257 | Q64152, Transcription factor BTF3 (Nascent polypeptide-associated complex subunit beta) (NAC-beta) (RNA polymerase B transcription factor 3) | BTF3_transcription factor_form a stable complex with RNA polymerase II. Required for the initiation of transcription | Transcription/Transcription factors/regulation_chromatin-binding/RNA-binding | Nucleus | 0 | 0 | 0 | 0.0023075408147505408 | 0 | 0 | 0 | 1 | ||||||||||
Sum | 0.005348594656753938 | 0.0644954595786446 | 0 | 0.01964032069272116 | 1 | 5 | 0 | 2 | ||||||||||||||
Nuclei | 3.2838292504331186 | |||||||||||||||||||||
RNA polymerase (I, II or III) constituents_no clear assignments | ||||||||||||||||||||||
Pcordatum_s116_g4023 | O27124, DNA-directed RNA polymerase subunit Rpo2C (EC 2.7.7.6) (DNA-directed RNA polymerase subunit B'), Q8CFI7, DNA-directed RNA polymerase | Rpo2C_DNA-directed RNA polymerase subunit_transcription, DNA-templated | Transcription/RNA polymerase | Nucleus | 0.017382932634450298 | 0.001560231823632932 | 0 | 0.001524866857519628 | 1 | 1 | 0 | 1 | ||||||||||
Pcordatum_s3724_g42733 | A0A813BCS9, RpoC2 protein, Q19VA0, DNA-directed RNA polymerase | RpoC2_DNA-directed RNA polymerase subunit beta_transcription, DNA-templated | Transcription/RNA polymerase | Nucleus | 0 | 0 | 0 | 0.0023176384722901062 | 0 | 0 | 0 | 1 | ||||||||||
Pcordatum_s5600_g53141 | P31813, DNA-directed RNA polymerase subunit Rpo1N (EC 2.7.7.6) (DNA-directed RNA polymerase subunit A'), P35084;P24928, DNA-directed RNA polymerase;RNA-directed RNA polymerase | RpoN1_DNA-directed RNA polymerase subunit_transcription, DNA-templated_Forms the clamp head domain (Rpb10?) | Transcription/RNA polymerase | Nucleus | 0.006685743320942422 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | ||||||||||
Pcordatum_s13520_g77097 | A0A7S2IHT2, DNA-directed RNA polymerase (EC 2.7.7.6) (Fragment), A1B017, DNA-directed RNA polymerase | Rpo2C_DNA-directed RNA polymerase subunit_transcription, DNA-templated | Transcription/RNA polymerase | Nucleus | 0 | 0 | 0 | 0.00523028518288177 | 0 | 0 | 0 | 1 | ||||||||||
Pcordatum_s7160_g59875 | P49465, DNA-directed RNA polymerase | RpoA_DNA-directed RNA polymerase subunit alpha_transcription, DNA-templated | Transcription/RNA polymerase | Nucleus | 0 | 0.01032130940248874 | 0 | 0.004505213087018348 | 0 | 1 | 0 | 1 | ||||||||||
Pcordatum_s18283_g83660 | A0A813EBT7, Hypothetical protein, A5EX69, DNA-directed RNA polymerase | RpoC2_DNA-directed RNA polymerase subunit beta_transcription, DNA-templated | Transcription/RNA polymerase | Nucleus | 0 | 0 | 0 | 0.0026814631018929115 | 0 | 0 | 0 | 1 | ||||||||||
Pcordatum_s632_g14073 | O15160, DNA-directed RNA polymerases I and III subunit RPAC1 (DNA-directed RNA polymerase I subunit C) (RNA polymerases I and III subunit AC1) (AC40) (DNA-directed RNA polymerases I and III 40 kDa polypeptide) (RPA40) (RPA39) (RPC40), Q2NFZ6, DNA-directed RNA polymerase | RpAC1_DNA-directed RNA polymerases I, II, and III subunit RPABC1_POLR1C_transcription, DNA-templated | Transcription/RNA polymerase | Nucleus | 0 | 0.004557143978514939 | 0 | 0 | 0 | 1 | 0 | 0 | ||||||||||
Sum | 0.02406867595539272 | 0.016438685204636608 | 0 | 0.016259466701602766 | 2 | 3 | 0 | 5 | ||||||||||||||
Nuclei | 1.0110224096720328 | |||||||||||||||||||||
Cold-shock proteins | ||||||||||||||||||||||
Pcordatum_s5233_g51267 | Q9KN00, Cold shock-like protein CspA | Activator_DNA-binding_CspA_negative regulation of DNA-templated transcription, termination | Transcription/stress response/coldshockprotein(CSP) | Nucleus | 0.10429759580670178 | 0.11441400363018168 | 0 | 8.60034070888509E-4 | 1 | 1 | 0 | 1 | ||||||||||
Pcordatum_s676_g14708 | P72366, Cold shock-like protein CspA | Activator_DNA-binding_CspA | Transcription/stress response/coldshockprotein(CSP) | Nucleus | 0.07488032519455512 | 0.2926461485819515 | 0 | 0.014392402286971787 | 1 | 1 | 0 | 1 | ||||||||||
Pcordatum_s12129_g74351 | P0A9Y4, Cold shock protein CspA (CSP-A) (7.4 kDa cold shock protein) (CS7.4) | Activator_DNA-binding_CspA | Transcription/stress response/coldshockprotein(CSP) | Nucleus | 0.020057229962827265 | 0.1891089684289285 | 0 | 0.022552063135473456 | 1 | 1 | 0 | 1 | ||||||||||
Pcordatum_s18023_g83425 | Q9Z3S6, Cold shock protein CspA | Activator_DNA-binding_CspA_stress response | Transcription/stress response/coldshockprotein(CSP) | Nucleus | 0.002674297328376969 | 0.025614404521033217 | 0 | 0 | 1 | 1 | 0 | 0 | ||||||||||
Pcordatum_s4306_g46247 | Q9S1B7, Cold shock-like protein CspA | Activator_DNA-binding_CspA_stress response | Transcription/stress response/coldshockprotein(CSP) | Nucleus | 0 | 0.019664125206472385 | 0 | 0.016010891008126908 | 0 | 1 | 0 | 1 | ||||||||||
Pcordatum_s155_g5017 | Q9Z3S6, Cold shock protein CspA | Activator_DNA-binding_CspA_stress response | Transcription/stress response/coldshockprotein(CSP) | Nucleus | 0 | 0.016636421244293022 | 0 | 0 | 0 | 1 | 0 | 0 | ||||||||||
Pcordatum_s5021_g50221 | Q9S1B7, Cold shock-like protein CspA | Activator_DNA-binding_CspA_stress response | Transcription/stress response/coldshockprotein(CSP) | Nucleus | 0 | 0.004985416184084707 | 0 | 0 | 0 | 1 | 0 | 0 | ||||||||||
Pcordatum_s4008_g44466 | P42016, Cold shock protein CspB (Major cold shock protein) | Activator_DNA-binding_CspA_stress response | Transcription/stress response/coldshockprotein(CSP) | Nucleus | 0 | 0.0022838284197473644 | 0 | 0 | 0 | 1 | 0 | 0 | ||||||||||
Pcordatum_s1810_g27893 | Q81DK5, Cold shock-like protein CspE | Activator_DNA-binding_CspE_negative regulation of DNA-templated transcription, termination | Transcription/stress response/coldshockprotein(CSP) | Nucleus | 0 | 0.006312646757160746 | 0 | 0.011658499185961088 | 0 | 1 | 0 | 1 | ||||||||||
Pcordatum_s64_g2440 | Q9S170, Cold shock-like protein CspG | Activator_DNA-binding_CspG_stress response | Transcription/stress response/coldshockprotein(CSP) | Nucleus | 0.002674297328376969 | 0.022499842576413936 | 0 | 0 | 1 | 1 | 0 | 0 | ||||||||||
Pcordatum_s12818_g75775 | Q9S170, Cold shock-like protein CspG | Activator_DNA-binding_CspG_stress response | Transcription/stress response/coldshockprotein(CSP) | Nucleus | 0 | 0.037543964145961194 | 0 | 0.009427519714943372 | 0 | 1 | 0 | 1 | ||||||||||
Pcordatum_s2497_g34001 | P48859, Cold shock protein ScoF | Activator_DNA-binding_ScoF_regulation of gene expression | Transcription/stress response/coldshockprotein(CSP) | Nucleus | 0 | 0.023347686688811577 | 0 | 0.009437843439442779 | 0 | 1 | 0 | 1 | ||||||||||
Pcordatum_s107_g3743 | P48859, Cold shock protein ScoF | Activator_DNA-binding_ScoF_regulation of gene expression | Transcription/stress response/coldshockprotein(CSP) | Nucleus | 0 | 0.017908187412889482 | 0 | 0 | 0 | 1 | 0 | 0 | ||||||||||
Pcordatum_s540_g12593 | P48859, Cold shock protein ScoF | Activator_DNA-binding_ScoF_regulation of gene expression | Transcription/stress response/coldshockprotein(CSP) | Nucleus | 0 | 0.012643346634210925 | 0 | 0 | 0 | 1 | 0 | 0 | ||||||||||
Pcordatum_s4360_g46589 | P55390, Probable cold shock protein y4cH | Activator_DNA-binding_y4cH | Transcription/stress response/coldshockprotein(CSP) | Nucleus | 0 | 0.08778238918124195 | 0 | 0.0116921831629774 | 0 | 1 | 0 | 1 | ||||||||||
Pcordatum_s7024_g59327 | P71478, Cold shock protein 1, Q8WZ42, non-specific serine/threonine protein kinase | Activator_DNA-binding_Csp1 | Transcription/stress response/coldshockprotein(CSP) | Nucleus | 0 | 0.004369145023200498 | 0 | 0.0019937598744912094 | 0 | 1 | 0 | 1 | ||||||||||
Pcordatum_s2731_g35816 | P71478, Cold shock protein 1 | Activator_DNA-binding_Csp2 | Transcription/stress response/coldshockprotein(CSP) | Nucleus | 0.008022891985130906 | 0.19286314733605608 | 0.016455358961901926 | 0 | 1 | 1 | 1 | 0 | ||||||||||
Pcordatum_s2849_g36736 | P0DA49, Major cold shock protein | Activator_DNA-binding_MCsp | Transcription/stress response/coldshockprotein(CSP) | Nucleus | 0 | 0.033446195941018296 | 0 | 0 | 0 | 1 | 0 | 0 | ||||||||||
Pcordatum_s17894_g83279 | A0A812RMB8, CspLB protein | Activator_DNA-binding_CspA_stress response | Transcription/stress response/mRNA-stabilization | Nucleus | 0 | 0.03658838133414309 | 0 | 0 | 0 | 1 | 0 | 0 | ||||||||||
Sum | 0.21260663760596898 | 1.1406582492478001 | 0.016455358961901926 | 0.09802519587927652 | 6 | 19 | 1 | 9 | ||||||||||||||
12.920206608570739 | 11.63637816804349 | |||||||||||||||||||||
Transcription machinery | ||||||||||||||||||||||
Pcordatum_s13775_g77579 | A0A391PCX9, Uncharacterized protein (Fragment), P79621, Transferases acyltransferases transferring groups other than aminoacyl groups;non-specific serine/threonine protein kinase | Activator_MHC class II transactivator_for transcriptional activity of the HLA class II promoter | Transcription/Transcription regulation | Nucleus | 0 | 2.6566362208375535E-4 | 0 | 0 | 0 | 1 | 0 | 0 | ||||||||||
Pcordatum_s741_g15660 | A0A391PCX9, Uncharacterized protein (Fragment), P79621, Transferases acyltransferases transferring groups other than aminoacyl groups;non-specific serine/threonine protein kinase | Activator_MHC class II transactivator_for transcriptional activity of the HLA class II promoter | Transcription/Transcription regulation | Nucleus | 0 | 0.009133718624220109 | 0 | 0.0036448022378634372 | 0 | 1 | 0 | 1 | ||||||||||
Pcordatum_s8986_g66198 | A0A7S3F2E4, Hypothetical protein, P79621, Transferases acyltransferases transferring groups other than aminoacyl groups;non-specific serine/threonine protein kinase | Activator_MHC class II transactivator_for transcriptional activity of the HLA class II promoter | Transcription/Transcription regulation | Nucleus | 0 | 0 | 7.835885219953298E-4 | 0 | 0 | 0 | 1 | 0 | ||||||||||
Pcordatum_s1099_g20323 | Q8N7H5, RNA polymerase II-associated factor 1 homolog (hPAF1) (Pancreatic differentiation protein 2) | Chromatin regulator_PAF1_RNA polymerase II-associated factor 1_histone ubiquitination_Component of the PAF1 complex (PAF1C) | Transcription/Transcription factors/regulation_chromatin-binding/RNA-binding | Nucleus | 0 | 0.005988488126535653 | 0 | 0 | 0 | 1 | 0 | 0 | ||||||||||
Pcordatum_s211_g6305 | Q54I57, c-Myc-binding protein homolog | Chromatin regulator_Regulator_transcription coactivator activity_c-Myc-binding protein homolog | Transcription/Transcription factors/regulation_chromatin-binding/RNA-binding | Nucleus | 0 | 1.7924790482988598E-4 | 0 | 0.00211169147187494 | 0 | 1 | 0 | 1 | ||||||||||
Pcordatum_s9252_g67014 | A0A7S1MNK1, Hypothetical protein, Q6GND3, Oxidoreductases acting on paired donors, with incorporation or reduction of molecular oxygen with 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor | Chromatin regulator_Histone H4-R3 demethylation_Bifunctional arginine demethylase and lysyl-hydroxylase | Transcription | Nucleus | 0.005348594656753938 | 0.0011749028426033662 | 0 | 0.0025595301193199944 | 1 | 1 | 0 | 1 | ||||||||||
Pcordatum_s18945_g84242 | A0A812U814, Hypothetical protein, A6H737, protein-lysine 6-oxidase | Chromatin regulator_Oxidoreductase_transcription corepressor | Transcription_Chromatin regulator/organization | Nucleus | 0.004011445992565453 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | ||||||||||
DNA methylation | ||||||||||||||||||||||
Pcordatum_s9628_g68136 | A0A812Y2Z7, Hypothetical protein, Q9Y6K1, Transferases transferring one-carbon groups methyltransferases;DNA (cytosine-5-)-methyltransferase | Histone-lysine N-methyltransferase _DNA-methylation_Chromatin regulator_Methyltransferase_Repressor_Transferase | Transcription_Chromatin regulator/organization | Nucleus | 0.00936004064931939 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | ||||||||||
Pcordatum_s1401_g23734 | Q9HYV6, Putative ankyrin repeat protein PA3287, Q96KQ7, Transferases transferring one-carbon groups methyltransferases | Histone-lysine N-methyltransferase _DNA-methylation_Chromatin regulator_Methyltransferase_Transferase | Transcription_Chromatin regulator/organization | Nucleus | 0 | 0.017404150105775718 | 0 | 0.00532591150689452 | 0 | 1 | 0 | 1 | ||||||||||
Pcordatum_s8705_g65310 | Q1RK83, Putative ankyrin repeat protein RBE_0150, Q5DW34, Transferases transferring one-carbon groups methyltransferases | Histone-lysine N-methyltransferase _DNA-methylation_Chromatin regulator_Methyltransferase_Transferase | Transcription_Chromatin regulator/organization | Nucleus | 0 | 0.0024857478530488377 | 0 | 0.0023363266743036304 | 0 | 1 | 0 | 1 | ||||||||||
Pcordatum_s7653_g61725 | A0A7J9GVB0, Uncharacterized protein (Fragment), Q7XI75, type I protein arginine methyltransferase | Histone-arginine methyltransferase CARM1_Chromatin regulator/organization_ Methyltransferase_Transferase | Transcription_Chromatin regulator/organization | Nucleus | 0 | 0.0012704611237851766 | 0 | 9.922078867422236E-4 | 0 | 1 | 0 | 1 | ||||||||||
Pcordatum_s3811_g43234 | A0A7S4Q394, Hypothetical protein, Q9H7B4, [histone H3]-lysine4 N-trimethyltransferase | Histone-lysine N-methyltransferase _DNA-methylation_Chromatin regulator_Methyltransferase_Repressor_Transferase | Transcription_Chromatin regulator/organization | Nucleus | 0 | 0.001188460808142819 | 0 | 2.631570123855999E-4 | 0 | 1 | 0 | 1 | ||||||||||
Pcordatum_s5635_g53304 | Q502M6, Ankyrin repeat domain-containing protein 29, Q9H9B1, Transferases transferring one-carbon groups methyltransferases | Histone-lysine N-methyltransferase _DNA-methylation_Chromatin regulator_Methyltransferase_Transferase | Transcription_Chromatin regulator/organization | Nucleus | 0 | 0 | 0 | 9.412674651247144E-4 | 0 | 0 | 0 | 1 | ||||||||||
Pcordatum_s17494_g82851 | E9Q5F9, [histone H3]-lysine36 N-trimethyltransferase;Transferases transferring one-carbon groups methyltransferases | Histone-lysine N-methyltransferase _DNA-methylation_Chromatin regulator_Methyltransferase_Transferase | Transcription_Chromatin regulator/organization | Nucleus | 0 | 0.10329284676335476 | 0 | 0 | 0 | 1 | 0 | 0 | ||||||||||
Sum | 0.00936004064931939 | 0.1256416666541073 | 0 | 0.009858870545450687 | 1 | 5 | 0 | 5 | ||||||||||||||
Nuclei | 12.744022357823114 | |||||||||||||||||||||
RNA-binding proteins | ||||||||||||||||||||||
Pcordatum_s10667_g70923 | A0A812NNZ7, PABPC4 protein | Polyadenylate-binding protein | mRNA-processing/splicing | Nucleus | 0.01203433797769636 | 0.07663150629371354 | 0 | 0.040038719257442526 | 1 | 1 | 0 | 1 | ||||||||||
Pcordatum_s17791_g83167 | O14327, Polyadenylate-binding protein 2 (PABP-2) (Poly(A)-binding protein 2) (Poly(A)-binding protein II) (PABII) | Polyadenylate-binding protein 2_homologous chromosome pairing at meiosis | mRNA-processing/transport/translation | Nucleus | 0.0013371486641884844 | 0.08828918158295732 | 0 | 0.017544755330648212 | 1 | 1 | 0 | 1 | ||||||||||
Pcordatum_s4_g175 | Q9LX90, Polyadenylate-binding protein 3 (AtPabN2) (AtPabN3) (Poly(A)-binding protein 3) (Nuclear poly(A)-binding protein 3) (Poly(A)-binding protein III) (PABIII) | Polyadenylate-binding protein 3_Involved in the 3'-end formation of mRNA precursors | mRNA-processing/transport/translation | Nucleus | 0 | 0.002993627792106942 | 0 | 0 | 0 | 1 | 0 | 0 | ||||||||||
Pcordatum_s9195_g66832 | P0CP46, Polyadenylate-binding protein, cytoplasmic and nuclear (PABP) (Poly(A)-binding protein) (Polyadenylate tail-binding protein), P0C1I2, peptidylprolyl isomerase | Polyadenylate-binding protein, cytoplasmic and nuclear_mRNA cleavage and polyadenylation | mRNA-processing/transport/translation | Nucleus | 0.05482309523172786 | 0.026755448701032712 | 0.09873215377141155 | 0.1424839763355306 | 1 | 1 | 1 | 1 | ||||||||||
Pcordatum_s4838_g49273 | P0CP46, Polyadenylate-binding protein, cytoplasmic and nuclear (PABP) (Poly(A)-binding protein) (Polyadenylate tail-binding protein), O95071, HECT-type E3 ubiquitin transferase | Polyadenylate-binding protein, cytoplasmic and nuclear_mRNA cleavage and polyadenylation | mRNA-processing/transport/translation | Nucleus | 0.053485946567539376 | 0.003668553467009425 | 0 | 0.028258972825353373 | 1 | 1 | 0 | 1 | ||||||||||
Pcordatum_s4838_g49274 | P31209, Polyadenylate-binding protein, cytoplasmic and nuclear (PABP) (Poly(A)-binding protein) (Polyadenylate tail-binding protein), Q5R723, peptidylprolyl isomerase | Polyadenylate-binding protein, cytoplasmic and nuclear_mRNA cleavage and polyadenylation | mRNA-processing/transport/translation | Nucleus | 0.020057229962827265 | 0 | 0 | 0.0019508900433400243 | 1 | 0 | 0 | 1 | ||||||||||
Pcordatum_s8322_g64077 | A0A1V4R2B6, RNA-binding protein | RNA-binding protein | mRNA-processing/splicing | Nucleus | 0 | 0.02186718585289916 | 0 | 0 | 0 | 1 | 0 | 0 | ||||||||||
Pcordatum_s15903_g80919 | A0A812W7H0, RBM25 protein (Fragment) | RNA-binding protein | mRNA-processing/splicing | Nucleus | 0 | 0.007976723896527144 | 0 | 0 | 0 | 1 | 0 | 0 | ||||||||||
Pcordatum_s6739_g58169 | A0A3G5A8R3, Putative RNA-binding protein C17H9.04c | RNA-binding protein (putative) | mRNA-processing/splicing_metal-ion binding | Nucleus | 0 | 0.001670239850975239 | 0 | 0 | 0 | 1 | 0 | 0 | ||||||||||
Pcordatum_s2428_g33492 | Q44556, Putative RNA-binding protein RbpD, Q4G338, peptidylprolyl isomerase | RNA-binding protein RbpD (putative) | mRNA-processing/splicing | Nucleus | 0.013371486641884844 | 0.023649514552665812 | 0.004701531131971979 | 0.0018221750519718774 | 1 | 1 | 1 | 1 | ||||||||||
Pcordatum_s16458_g81640 | A0A6B2G4F4, Lupus La protein homolog A (Trinotate prediction) (Fragment) | RNA-binding protein_histone mRNA metabolic process | mRNA-processing_splicing | Nucleus | 0 | 0.011667898140265495 | 0 | 0 | 0 | 1 | 0 | 0 | ||||||||||
Pcordatum_s10060_g69309 | Q9LZ82, Protein BTR1 (Binding to ToMV RNA 1), B2J2V3, polyribonucleotide nucleotidyltransferase | RNA-binding protein_regulation by virus of viral protein levels in host cell_viral genomic RNA-binding | mRNA-processing/splicing | Nucleus | 0 | 0.0019098605788249227 | 0 | 0 | 0 | 1 | 0 | 0 | ||||||||||
Pcordatum_s6712_g58063 | A0A845D3L8, S1 RNA-binding domain-containing protein | RNA-binding protein_S1 RNA-binding domain-containing protein | mRNA-processing/splicing | Nucleus | 0.01203433797769636 | 0.016764243133309358 | 0 | 0.030868614454104784 | 1 | 1 | 0 | 1 | ||||||||||
Pcordatum_s13960_g77894 | A0A7C6XZA5, S1 RNA-binding domain-containing protein | RNA-binding protein_S1 RNA-binding domain-containing protein | mRNA-processing/splicing | Nucleus | 0.002674297328376969 | 0.003935072618469467 | 0 | 0.010724465863551287 | 1 | 1 | 0 | 1 | ||||||||||
Pcordatum_s196_g5960 | Q5RF83, Cold-inducible RNA-binding protein (Glycine-rich RNA-binding protein CIRP), Q9QZH3, peptidylprolyl isomerase | RNA-binding_Cold-inducible RNA-binding protein | mRNA stabilization/stress response_Cold-inducible mRNA binding protein that plays a protective role in the genotoxic stress response by stabilizing transcripts of genes | Nucleus | 0 | 0.014570462805540606 | 0 | 0 | 0 | 1 | 0 | 0 | ||||||||||
Pcordatum_s2565_g34568 | Q3EDF8, Pentatricopeptide repeat-containing protein At1g09900 | RNA-binding/mRNA-binding/Transcription/Translation | Transcription/Translation | Nucleus | 0 | 0.003004865677981889 | 0 | 0 | 0 | 1 | 0 | 0 | ||||||||||
Pcordatum_s3874_g43615 | A0A1Q9CKV7, CCHC-type domain-containing protein | CCHC-type zinc finger nucleic acid binding protein_Transcription_Transcription regulation_mediates transcriptional repression | Transcription | Nucleus | 0 | 0.0052881140778131275 | 0 | 0 | 0 | 1 | 0 | 0 | ||||||||||
Sum | 0.16981788035193754 | 0.3106424990220922 | 0.10343368490338353 | 0.2736925691619427 | 8 | 16 | 2 | 8 | ||||||||||||||
1.6418044132389065 | 1.1350052358867164 | |||||||||||||||||||||
DNA/Histone methylation | ||||||||||||||||||||||
Pcordatum_s899_g17814 | A0A812Y2Z7, Hypothetical protein, O88509, DNA (cytosine-5-)-methyltransferase | DNA (cytosine-5)-methyltransferase 3B_DNA methylation_may transcriptional co-repressor | DNA-methylation | Nucleus | 0.14842350172492177 | 0.017323382332455128 | 0.009403062263943957 | 0.010021623685405564 | 1 | 1 | 1 | 1 | ||||||||||
Pcordatum_s2924_g37294 | A0A812PD87, Hypothetical protein, P25264, DNA (cytosine-5-)-methyltransferase | Type II methyltransferase M.HgiCII_DNA restriction-modification system | DNA-methylation | Nucleus | 0 | 0 | 0.003917942609976649 | 0 | 0 | 0 | 1 | 0 | ||||||||||
Pcordatum_s11941_g73944 | P58467, [histone H3]-lysine4 N-methyltransferase | Histone-lysine N-methyltransferase_histone H3-K4 dimethylation_monomethylation_trimethylation | Histone_Methylation | Nucleus | 0 | 0.011816673248751894 | 0 | 0.02145902938464214 | 0 | 1 | 0 | 1 | ||||||||||
Pcordatum_s1420_g23921 | Q9M2Z2, COMPASS-like H3K4 histone methylase component WDR5A (AtWDR5A), P49695, non-specific serine/threonine protein kinase | COMPASS-like H3K4 histone methylase component WDR5A | Histone_Methylation | Nucleus | 0 | 0.002023761989854228 | 0 | 0 | 0 | 1 | 0 | 0 | ||||||||||
Pcordatum_s4521_g47531 | A8X8C6, WD repeat-containing protein tag-125, P49695, non-specific serine/threonine protein kinase | Histone H3-K4 methylation_Set1 complex_MLL3/4 complex | Histone_Methylation | Nucleus | 0 | 0.00131492690060521 | 0 | 6.245853322140899E-4 | 0 | 1 | 0 | 1 | ||||||||||
Pcordatum_s3689_g42505 | Q5LJZ2, [histone H3]-lysine4 N-trimethyltransferase | Histone H3-K4 dimethylation/methylation/trimethylation_regulates chromatin changes at active promoters _Chromatin organization_ | Transcription_Chromatin regulator/organization | Nucleus | 0 | 0.0060462001081902205 | 0 | 0 | 0 | 1 | 0 | 0 | ||||||||||
Pcordatum_s426_g10623 | A0A7S4R0X6, Hypothetical protein, Q8CIG3, [histone H3]-N6,N6-dimethyl-L-lysine4 FAD-dependent demethylase | Histone H3-K4 dimethylation_Transcriptional activation | Transcription_Chromatin regulator/organization | Nucleus | 0 | 0 | 0 | 0.0167061976209446 | 0 | 0 | 0 | 1 |
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relative share | No. of proteins | relative share | No. of proteins | |||||||||||||||||||
Accession | Protein function | Protein function (translated) | Biological process | Kategory | Nuclei_geLC | Nuclei_SG | Cell_geLC | Cell_SG | Nuclei_geLC | Nuclei_SG | Cell_geLC | Cell_SG | Nuclei_geLC | Nuclei_SG | Cell_geLC | Cell_SG | Nuclei_geLC | Nuclei_SG | Cell_geLC | Cell_SG | ||
Sum total | 0.15243494771748725 | 0.8041150333735769 | 0.014888181917911265 | 0.15690322784176616 | 6 | 17 | 2 | 13 | ||||||||||||||
NPC components | 10.238654293584363 | 5.124910713656645 | ||||||||||||||||||||
Pcordatum_s945_g18443 | Q02199, Nucleoporin NUP49/NSP49 (Nuclear pore protein NUP49/NSP49), P49687, Hydrolases acting on peptide bonds (peptidases) serine endopeptidases | NUP_Component Nuclear pore complex_NLS-bearing protein import into nucleus_mRNA/tRNA/ribosomal large subunit export | Nuclear import/export | Nucleus | 0.005348594656753938 | 0.004401626138503571 | 0 | 2.2100305994057822E-4 | 1 | 1 | 0 | 1 | ||||||||||
Pcordatum_s548_g12716 | A0A7S4RL33, Nuclear pore complex protein Nup85 | NUP_Component Nuclear pore complex_mRNA/protein transport | Nuclear import/export | Nucleus | 0 | 0 | 0 | 3.244588363291557E-4 | 0 | 0 | 0 | 1 | ||||||||||
Sum | 0.005348594656753938 | 0.004401626138503571 | 0 | 5.454618962697339E-4 | 1 | 1 | 0 | 2 | ||||||||||||||
Nuclei | 8.06953917148952 | |||||||||||||||||||||
Import_Export | ||||||||||||||||||||||
Pcordatum_s5186_g51027 | O80480, Importin subunit alpha-4 (IMPa-4), Q8GUG9, RING-type E3 ubiquitin transferase | Importin a subunit_NLS-bearing protein import into nucleus | Nuclear import/export | Nucleus | 0.006685743320942422 | 0.014527468829257742 | 0 | 0.001680702348503369 | 1 | 1 | 0 | 1 | ||||||||||
Pcordatum_s942_g18394 | P38545, GTP-binding nuclear protein Ran (GTPase Ran) (Ras-like protein TC4), Q5R9Y4, small monomeric GTPase | RAN GTP_Nucleocytoplasmic transport_protein transport | Nuclear import/export | Nucleus | 0.05482309523172786 | 0.12080292300631304 | 0.006268708175962638 | 0.09046822954571099 | 1 | 1 | 1 | 1 | ||||||||||
Pcordatum_s12353_g74818 | P32836, GTP-binding nuclear protein GSP2/CNR2, Q4R8X3, small monomeric GTPase | GSP2/CNR2_Nucleus organization_mRNA export_protein import | Nuclear import/export | Nucleus | 0 | 0.001406983311543408 | 0 | 0.0013635906883690465 | 0 | 1 | 0 | 1 | ||||||||||
Pcordatum_s8024_g63084 | Q96VN3, Nuclear transport factor 2 (NTF-2) | Nuclear transport factor (NTF)_mRNA transport_ | Nuclear import/export | Nucleus | 0 | 0.0021031522158740175 | 0 | 0.0029320131134847106 | 0 | 1 | 0 | 1 | ||||||||||
Sum | 0.06150883855267028 | 0.1388405273629882 | 0.006268708175962638 | 0.0964445356960681 | 2 | 4 | 1 | 4 | ||||||||||||||
9.812043698018346 | 1.4395893594275295 | |||||||||||||||||||||
Import_Export_further proteins | ||||||||||||||||||||||
Pcordatum_s7752_g62085 | Q9PW80, Insulin-like growth factor 2 mRNA-binding protein 3 (IGF2 mRNA-binding protein 3) (IMP-3) (Decapentaplegic and Vg-related 1 RNA-binding protein) (IGF-II mRNA-binding protein 3) (VICKZ family member 3) (Vg1 RNA-binding protein) (Vg1-RBP) | mRNA transport, Translation regulation, Transport | Nuclear import/export_mRNA transport_Translation regulation | Nucleus | 0 | 0.0017822416967792304 | 0 | 0.001488666001683753 | 0 | 1 | 0 | 1 | ||||||||||
Pcordatum_s441_g10901 | Q9PW80, Insulin-like growth factor 2 mRNA-binding protein 3 (IGF2 mRNA-binding protein 3) (IMP-3) (Decapentaplegic and Vg-related 1 RNA-binding protein) (IGF-II mRNA-binding protein 3) (VICKZ family member 3) (Vg1 RNA-binding protein) (Vg1-RBP) | mRNA transport, Translation regulation, Transport | Nuclear import/export_mRNA transport_Translation regulation | Nucleus | 0 | 0.001170088677299518 | 0 | 0 | 0 | 1 | 0 | 0 | ||||||||||
Pcordatum_s1393_g23648 | Q5RB68, Insulin-like growth factor 2 mRNA-binding protein 2 (IGF2 mRNA-binding protein 2) (IMP-2) (IGF-II mRNA-binding protein 2) (VICKZ family member 2) | mRNA transport, Translation regulation, Transport | Nuclear import/export_mRNA transport_Translation regulation | Nucleus | 0 | 0.015286569894488058 | 0 | 0.0062886930110307715 | 0 | 1 | 0 | 1 | ||||||||||
Pcordatum_s604_g13656 | O42254, Insulin-like growth factor 2 mRNA-binding protein 1 (IGF2 mRNA-binding protein 1) (IMP-1) (IGF-II mRNA-binding protein 1) (VICKZ family member 1) (Zip-code binding polypeptide) (Zipcode-binding protein 1) (ZBP-1), B9DTE3, polyribonucleotide nucleotidyltransferase | mRNA transport, Translation regulation, Transport | Nuclear import/export_mRNA transport_Translation regulation | Nucleus | 0.005348594656753938 | 0.009044294053651335 | 0 | 0 | 1 | 1 | 0 | 0 | ||||||||||
Pcordatum_s17796_g83170 | A0A813G3T8, Hypothetical protein (Fragment), P49792, Transferases acyltransferases aminoacyltransferases | E3 SUMO-protein ligase RanBP2_centrosome localization_NLS-bearing protein import into nucleus_nuclear export | Nuclear protein export | Nucleus | 0.06418313588104725 | 0.3877868154241509 | 0 | 0.01217453469962485 | 1 | 1 | 0 | 1 | ||||||||||
Pcordatum_s18441_g83801 | A0A7S3TIX4, Hypothetical protein, Q9ERU9, Transferases acyltransferases aminoacyltransferases | E3 SUMO-protein ligase RanBP2_centrosome localization_NLS-bearing protein import into nucleus_nuclear export | Nuclear protein export | Nucleus | 0 | 0.033860910181048615 | 0 | 0.006699268287928699 | 0 | 1 | 0 | 1 | ||||||||||
Pcordatum_s2406_g33315 | A0A7S2BVC2, Hypothetical protein (Fragment), P49792, Transferases acyltransferases aminoacyltransferases | E3 SUMO-protein ligase RanBP2_centrosome localization_NLS-bearing protein import into nucleus_nuclear export | Nuclear protein export | Nucleus | 0.016045783970261813 | 0.016560221127811928 | 0.008619473741948627 | 0.005198786519810587 | 1 | 1 | 1 | 1 | ||||||||||
Pcordatum_s50_g1978 | A0A7S4VR13, Hypothetical protein (Fragment), H2QII6, Transferases acyltransferases aminoacyltransferases | E3 SUMO-protein ligase RanBP2_centrosome localization_NLS-bearing protein import into nucleus_nuclear export | Nuclear protein export | Nucleus | 0 | 0.033835534309718085 | 0 | 0 | 0 | 1 | 0 | 0 | ||||||||||
Pcordatum_s6065_g55316 | H2QII6, Transferases acyltransferases aminoacyltransferases | E3 SUMO-protein ligase RanBP2_centrosome localization_NLS-bearing protein import into nucleus_nuclear export | Nuclear protein export | Nucleus | 0 | 0.008827903123442511 | 0 | 0 | 0 | 1 | 0 | 0 | ||||||||||
Pcordatum_s1459_g24337 | A0A7S3U1G8, Hypothetical protein, P97343, non-specific serine/threonine protein kinase | Kinase_regulation of cell cycle/protein export from nucleus | Nuclear protein export | Nucleus | 0 | 0.00894223954940891 | 0 | 0 | 0 | 1 | 0 | 0 | ||||||||||
Pcordatum_s7000_g59218 | A0A7S2FDZ7, Hypothetical protein, Q63285, non-specific serine/threonine protein kinase | Kinase_regulation of cell cycle/protein export from nucleus | Nuclear protein export | Nucleus | 0 | 0.1145894596548099 | 0 | 0.027506697338655746 | 0 | 1 | 0 | 1 | ||||||||||
Pcordatum_s4695_g48498 | Q7XKC0, Probable protein arginine N-methyltransferase 6.1 (EC 2.1.1.-), Q54EF2, type I protein arginine methyltransferase | mRNA export_histone methyltransferase activity | Nuclear import/export | Nucleus | 0 | 0 | 0 | 5.56584390693912E-4 | 0 | 0 | 0 | 1 | ||||||||||
Pcordatum_s6018_g55104 | Q5RBU8, Heterogeneous nuclear ribonucleoproteins A2/B1 (hnRNP A2/B1), Q4KMD7, polynucleotide adenylyltransferase;RNA uridylyltransferase | Ribonucleoproteins A2/B1_nuclear_mRNA transport_mRNA export from nucleus | Nuclear protein export_Ribonucleoprotein_mRNA-export | Nucleus | 0 | 0.02918660217947616 | 0 | 0 | 0 | 1 | 0 | 0 | ||||||||||
Sum | 0.085577514508063 | 0.6608728798720851 | 0.008619473741948627 | 0.05991323024942832 | 3 | 12 | 1 | 7 | ||||||||||||||
9.928392042263624 | 11.030499893275092 |
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relative share | No. of proteins | relative share | No. of proteins | |||||||||||||||||||
Accession | Protein function | Protein function (translated) | Biological process | Kategory | Nuclei_geLC | Nuclei_SG | Cell_geLC | Cell_SG | Nuclei_geLC | Nuclei_SG | Cell_geLC | Cell_SG | Nuclei_geLC | Nuclei_SG | Cell_geLC | Cell_SG | Nuclei_geLC | Nuclei_SG | Cell_geLC | Cell_SG | ||
Sum total | 0.10429759580670178 | 1.0426523565224262 | 0.007835885219953298 | 0.3030611238395877 | 9 | 30 | 2 | 32 | ||||||||||||||
Ubiquitin-conjugation system | 13.310250581659668 | 3.440402857722883 | ||||||||||||||||||||
Pcordatum_s760_g15913 | P84589, Ubiquitin (Fragment), A7E320, RING-type E3 ubiquitin transferase | Ubiquitin_Fragment | Ubiquitin_Ubl conjugation pathway | Nucleus | 0.005348594656753938 | 0.0017465124699458496 | 0 | 0 | 1 | 1 | 0 | 0 | ||||||||||
Pcordatum_s10634_g70829 | Q5U300, E1 ubiquitin-activating enzyme | E1 Ubiquitin-like modifier-activating enzyme 1 Uba1_Catalyzes the first step in ubiquitin conjugation to mark cellular proteins for degradation through the ubiquitin-proteasome_cellular response to DNA damage stimulus | Ubiquitin_Ubl conjugation pathway | Nucleus | 0.005348594656753938 | 0.022853074705334864 | 0 | 0 | 1 | 1 | 0 | 0 | ||||||||||
Pcordatum_s5982_g54945 | A0A1Q9DYY1, Ubiquitin-activating enzyme E1 2, Q29504, E1 ubiquitin-activating enzyme | E1 Ubiquitin-like modifier-activating enzyme 1 Uba1_Catalyzes the first step in ubiquitin conjugation to mark cellular proteins for degradation through the ubiquitin-proteasome | Ubiquitin_Ubl conjugation pathway | Nucleus | 0 | 0 | 0 | 0.002943165750170201 | 0 | 0 | 0 | 1 | ||||||||||
Pcordatum_s7294_g60369 | P31255, Ubiquitin-activating enzyme E1 Y (EC 6.2.1.45) (Fragment), Q55C16, E1 ubiquitin-activating enzyme | E1 Ubiquitin-like modifier-activating enzyme 1 Uba1_Catalyzes the first step in ubiquitin conjugation to mark cellular proteins for degradation through the ubiquitin-proteasome | Ubiquitin_Ubl conjugation pathway | Nucleus | 0 | 0 | 0 | 0.00435683780570936 | 0 | 0 | 0 | 1 | ||||||||||
Pcordatum_s5589_g53083 | A0A813IQ53, Hypothetical protein (Fragment), P31251, E1 ubiquitin-activating enzyme | E1 Ubiquitin-activating enzyme Uba2_ cellular response to DNA damage stimulus | Ubiquitin_Ubl conjugation pathway | Nucleus | 0 | 0.008031100763663986 | 0 | 0.011771758732841437 | 0 | 1 | 0 | 1 | ||||||||||
Pcordatum_s2674_g35403 | A0A7S1M4I5, Hypothetical protein (Fragment), P20973, E1 ubiquitin-activating enzyme | E1 Ubiquitin-activating enzyme Uba1_ cellular response to DNA damage stimulus | Ubiquitin_Ubl conjugation pathway | Nucleus | 0 | 0.0018776694734799126 | 0 | 0.015187103006466245 | 0 | 1 | 0 | 1 | ||||||||||
Pcordatum_s6888_g58764 | Q5UQ88, E2 ubiquitin-conjugating enzyme | E2 ubiquitin-conjugating enzyme R521_DNA protection | Ubiquitin_Ubl conjugation pathway | Nucleus | 0 | 0.009774133114113077 | 0 | 0 | 0 | 1 | 0 | 0 | ||||||||||
Pcordatum_s507_g12087 | P46595, Ubiquitin-conjugating enzyme E2 4 (EC 2.3.2.23) (E2 ubiquitin-conjugating enzyme 4) (Ubiquitin carrier protein 4) (Ubiquitin-protein ligase 4), P46595, E2 ubiquitin-conjugating enzyme | E2 Ubiquitin-conjugating enzyme E24_positive regulation of mitotic metaphase/anaphase transition | Ubiquitin_Ubl conjugation pathway | Nucleus | 0 | 0.01579771244557437 | 0 | 0 | 0 | 1 | 0 | 0 | ||||||||||
Pcordatum_s2708_g35653 | P53152, Ubiquitin-conjugating enzyme variant MMS2 (UEV MMS2), Q94490, E2 ubiquitin-conjugating enzyme | E2 Ubiquitin-conjugating enzyme E2B_protein ubiquitination and degradation | Ubiquitin_Ubl conjugation pathway | Nucleus | 0 | 0.12548585880413787 | 0.0023507655659859893 | 0.017709708855678873 | 0 | 1 | 1 | 1 | ||||||||||
Pcordatum_s212_g6315 | O74196, Ubiquitin-conjugating enzyme E2-16 kDa (EC 2.3.2.23) (Colletotrichum hard-surface-induced protein 1) (E2 ubiquitin-conjugating enzyme 1) (Ubiquitin carrier protein) (Ubiquitin-protein ligase), O74196, E2 ubiquitin-conjugating enzyme | E2 Ubiquitin-conjugating enzyme E2-16 kDa_Catalyzes the covalent attachment of ubiquitin to other proteins. | Ubiquitin_Ubl conjugation pathway | Nucleus | 0 | 0.03918752308079462 | 0 | 0.001820291160639869 | 0 | 1 | 0 | 1 | ||||||||||
Pcordatum_s1535_g25128 | O74196, Ubiquitin-conjugating enzyme E2-16 kDa (EC 2.3.2.23) (Colletotrichum hard-surface-induced protein 1) (E2 ubiquitin-conjugating enzyme 1) (Ubiquitin carrier protein) (Ubiquitin-protein ligase), O74196, E2 ubiquitin-conjugating enzyme | E2 Ubiquitin-conjugating enzyme E2-16 kDa_Catalyzes the covalent attachment of ubiquitin to other proteins. | Ubiquitin_Ubl conjugation pathway | Nucleus | 0 | 0.05650191510454979 | 0 | 0.008868606834563097 | 0 | 1 | 0 | 1 | ||||||||||
Pcordatum_s3011_g37904 | P70711, Ubiquitin-conjugating enzyme E2 D2B (EC 2.3.2.23) (E2 ubiquitin-conjugating enzyme D2B) (Ubiquitin carrier protein D2B) (Ubiquitin-conjugating enzyme E2(17)KB 2B) (Ubiquitin-conjugating enzyme E2-17 kDa 2B) (Ubiquitin-protein ligase D2B), Q66KB0, E2 ubiquitin-conjugating enzyme | E2 Ubiquitin-conjugating enzyme E2-16 kDa_Catalyzes the covalent attachment of ubiquitin to other proteins_Apoptosis regulation | Ubiquitin_Ubl conjugation pathway | Nucleus | 0 | 9.487675778036193E-4 | 0 | 0 | 0 | 1 | 0 | 0 | ||||||||||
Pcordatum_s7734_g62018 | P53152, Ubiquitin-conjugating enzyme variant MMS2 (UEV MMS2), P21734, E2 ubiquitin-conjugating enzyme | E2 Ubiquitin-conjugating enzyme variant MMS2_free ubiquitin chain polymerization_postreplication repair | Ubiquitin_Ubl conjugation pathway | Nucleus | 0 | 0.054877134314500954 | 0 | 0.004036274856654799 | 0 | 1 | 0 | 1 | ||||||||||
Pcordatum_s805_g16552 | A0A7S3HIG9, Hypothetical protein (Fragment), Q5BDP1, HECT-type E3 ubiquitin transferase | E3 ubiquitin ligase RSP5_cellular response to UV_chromatin assembly/disassembly | Ubiquitin_Ubl conjugation pathway | Nucleus | 0 | 0.031821342648479946 | 0 | 0.009457209842335825 | 0 | 1 | 0 | 1 | ||||||||||
Pcordatum_s2839_g36673 | A0A7S2CC24, Hypothetical protein (Fragment), O95714, HECT-type E3 ubiquitin transferase | E3 ubiquitin ligase HERC2_cellular response to DNA damage stimulus | Ubiquitin_Ubl conjugation pathway | Nucleus | 0 | 7.393803880820197E-4 | 0 | 0 | 0 | 1 | 0 | 0 | ||||||||||
Pcordatum_s7766_g62144 | A0A813JWM0, Hypothetical protein, Q5U5Q3, RING-type E3 ubiquitin transferase | E3 ubiquitin ligase MEX3C_post-transcriptional regulation_RNA-binding | Ubiquitin_Ubl conjugation pathway | Nucleus | 0 | 0.0011572847376510296 | 0 | 0 | 0 | 1 | 0 | 0 | ||||||||||
Pcordatum_s1458_g24327 | A0A813K212, Hypothetical protein, Q9ZT50, RING-type E3 ubiquitin transferase | E3 ubiquitin ligase RHA2A_signaling and responses to salt and osmotic stresses | Ubiquitin_Ubl conjugation pathway | Nucleus | 0.008022891985130906 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | ||||||||||
Pcordatum_s10309_g69962 | P19848, Ubiquitin, A7E320, RING-type E3 ubiquitin transferase | E3 ubiquitin ligase UHRF1_histone monoubiquination_DNA repair_chromatin organization | Ubiquitin_Ubl conjugation pathway | Nucleus | 0 | 0 | 0.005485119653967308 | 0.0098030169352393 | 0 | 0 | 1 | 1 | ||||||||||
Pcordatum_s9870_g68792 | A0A7S1LPN1, Hypothetical protein, Q05A36, RING-type E3 ubiquitin transferase | E3 ubiquitin ligase MEX3C_post-transcriptional regulation_RNA-binding | Ubiquitin_Ubl conjugation pathway | Nucleus | 0.01203433797769636 | 0.017866280973949357 | 0 | 0.010497720702830747 | 1 | 1 | 0 | 1 | ||||||||||
Pcordatum_s3749_g42890 | Q54KL5, WD repeat-containing protein 5 homolog, Q922B6, RING-type E3 ubiquitin transferase | E3 ubiquitin-protein ligase TRAF7_apoptosis | Ubiquitin_Ubl conjugation pathway | Nucleus | 0 | 0 | 0 | 0.008857378842224328 | 0 | 0 | 0 | 1 | ||||||||||
Pcordatum_s8425_g64409 | A0A7S3LZT3, Hypothetical protein, Q5WA76, RING-type E3 ubiquitin transferase;Transferases transferring phosphorus-containing groups protein-serine/threonine kinases | PUB70_Kinase/Transferase_ U-box domain-containing protein 70_functions as an E3 ubiquitin ligase | Ubiquitin_Ubl conjugation pathway | Nucleus | 0 | 0.0019986761284817647 | 0 | 0.0019912203889756617 | 0 | 1 | 0 | 1 | ||||||||||
Pcordatum_s754_g15838 | A0A7S4VRD1, Hypothetical protein, O95155, RING-type E3 ubiquitin transferase | E4 B_Ubiquitin conjugation factor | Ubiquitin_Ubl conjugation pathway | Nucleus | 0 | 0 | 0 | 2.797051138459623E-4 | 0 | 0 | 0 | 1 | ||||||||||
Sum | 0.03075441927633514 | 0.39066436673054306 | 0.007835885219953298 | 0.10757999882817569 | 4 | 16 | 2 | 14 | ||||||||||||||
3.9248174792073383 | 3.6313847461041826 | |||||||||||||||||||||
Deubiquitylation | ||||||||||||||||||||||
Pcordatum_s192_g5850 | F1M625, Ubiquitin carboxyl-terminal hydrolase 46 (EC 3.4.19.12) (Deubiquitinating enzyme 46) (Ubiquitin thioesterase 46) (Ubiquitin-specific-processing protease 46), Q9FPT1, ubiquitinyl hydrolase 1 | DUBs_Usp46 Ubiquitin carboxyl-terminal hydrolase _Deubiquitinating enzyme | Ubiquitin_Ubl conjugation pathway | Nucleus | 0 | 0 | 0 | 0.002331353201187128 | 0 | 0 | 0 | 1 | ||||||||||
Pcordatum_s6358_g56600 | P56399, Ubiquitin carboxyl-terminal hydrolase 5 (EC 3.4.19.12) (Deubiquitinating enzyme 5) (Isopeptidase T) (Ubiquitin thioesterase 5) (Ubiquitin-specific-processing protease 5), P56399, ubiquitinyl hydrolase 1 | DUBs_Usp5 Ubiquitin carboxyl-terminal hydrolase_Deubiquitinating enzyme | Ubiquitin_Ubl conjugation pathway | Nucleus | 0 | 0.004866939865966955 | 0 | 0.0044057059468616605 | 0 | 1 | 0 | 1 | ||||||||||
Pcordatum_s6240_g56095 | A0A7S2CGX2, Hypothetical protein (Fragment), Q6P8X6, ubiquitinyl hydrolase 1 | DUBs_Usp50 Ubiquitin carboxyl-terminal hydrolase _Deubiquitinating enzyme | Ubiquitin_Ubl conjugation pathway | Nucleus | 0.008022891985130906 | 0.0029546939552369633 | 0 | 0.0029895245480682647 | 1 | 1 | 0 | 1 | ||||||||||
Pcordatum_s2856_g36801 | Q84WC6, Ubiquitin carboxyl-terminal hydrolase 7 (EC 3.4.19.12) (Deubiquitinating enzyme 7) (AtUBP7) (Ubiquitin thioesterase 7) (Ubiquitin-specific-processing protease 7), Q84WC6, ubiquitinyl hydrolase 1 | DUBs_Usp7 Ubiquitin carboxyl-terminal hydrolase_Deubiquitinating enzyme | Ubiquitin_Ubl conjugation pathway | Nucleus | 0.004011445992565453 | 0.06370822754748215 | 0 | 0.021826614261343632 | 1 | 1 | 0 | 1 | ||||||||||
Pcordatum_s2082_g30427 | A0A813KVR4, Hypothetical protein (Fragment), Q9FPT1, ubiquitinyl hydrolase 1 | DUBs_Usp12 Ubiquitin carboxyl-terminal hydrolase_Deubiquitinating enzyme | Ubiquitin_Ubl conjugation pathway | Nucleus | 0 | 0 | 0 | 0.0012402937684717556 | 0 | 0 | 0 | 1 | ||||||||||
Sum | 0.01203433797769636 | 0.07152986136868607 | 0 | 0.03279349172593244 | 2 | 3 | 0 | 5 | ||||||||||||||
Nuclei | 2.1812212608065056 | |||||||||||||||||||||
SUMO related proteins | ||||||||||||||||||||||
Pcordatum_s2768_g36110 | Q17QV3, Small ubiquitin-related modifier 3 (SUMO-3) | SUMO 3 - small ubiquitin-related modifier 3_negative regulation of DNA binding_regulation of protein localization to nucleus | Ubiquitin_Ubl conjugation pathway | Nucleus | 0.01203433797769636 | 0.3074395565427531 | 0 | 0.0501921399804354 | 1 | 1 | 0 | 1 | ||||||||||
Pcordatum_s7164_g59892 | P40984, SUMO-conjugating enzyme ubc9 (EC 2.3.2.-) (Ubiquitin carrier protein 9) (Ubiquitin carrier protein hus5) (Ubiquitin-conjugating enzyme E2-18 kDa), P40984, Transferases acyltransferases aminoacyltransferases | SUMO 9 - conjugating enzyme ubc9_protein modification_SUMO-conjugating enzyme ubc9_DNA repair | Ubiquitin_Ubl conjugation pathway | Nucleus | 0 | 0.026998622050868667 | 0 | 0.0013923464056608238 | 0 | 1 | 0 | 1 | ||||||||||
Pcordatum_s2674_g35405 | O42939, Ubiquitin-activating enzyme E1-like (Pmt3-activating enzyme subunit 2), P22314, E1 ubiquitin-activating enzyme | SUMO E1 Ubiquitin-activating enzyme E1-like Uba2_the dimeric enzyme acts as a SUMO/pmt3 E1 ligase | Ubiquitin_Ubl conjugation pathway | Nucleus | 0 | 0 | 0 | 0.0027399692310997666 | 0 | 0 | 0 | 1 | ||||||||||
Pcordatum_s18140_g83534 | Q9Z1F9, SUMO-activating enzyme subunit 2 (EC 2.3.2.-) (Anthracycline-associated resistance ARX) (Ubiquitin-like 1-activating enzyme E1B) (Ubiquitin-like modifier-activating enzyme 2), Q9Z1F9, Transferases acyltransferases aminoacyltransferases | SUMO subunit 2_positive regulation of protein sumoylation | Ubiquitin_Ubl conjugation pathway | Nucleus | 0 | 0.00946984016561531 | 0 | 4.967067885973545E-4 | 0 | 1 | 0 | 1 | ||||||||||
Pcordatum_s6071_g55343 | A0A7S3X513, Hypothetical protein (Fragment), Q54L40, Transferases acyltransferases aminoacyltransferases | SUMO-activating enzyme subunit 2_protein modification by small protein conjugation | Ubiquitin_Ubl conjugation pathway | Nucleus | 0 | 0 | 0 | 0.027762605137195775 | 0 | 0 | 0 | 0 | ||||||||||
Sum | 0.01203433797769636 | 0.3439080187592371 | 0 | 0.08258376754298913 | 1 | 3 | 0 | 4 | ||||||||||||||
Nuclei | 4.164353710070386 | |||||||||||||||||||||
Neddylation related proteins | ||||||||||||||||||||||
Pcordatum_s9829_g68666 | Q6P8D9, NEDD8-conjugating enzyme Ubc12 (EC 2.3.2.34) (NEDD8 carrier protein) (Ubiquitin-conjugating enzyme E2 M), Q6P8D9, E2 NEDD8-conjugating enzyme | NEDD8-conjugating enzyme_cell proliferation | Ubiquitin_Ubl conjugation pathway | Nucleus | 0 | 0.04422071840547024 | 0 | 0.002884388340611536 | 0 | 1 | 0 | 1 | ||||||||||
Pcordatum_s1304_g22671 | Q7ZVX6, NEDD8-activating enzyme E1 catalytic subunit (EC 6.2.1.64) (NEDD8-activating enzyme E1C) (Ubiquitin-activating enzyme E1C) (Ubiquitin-like modifier-activating enzyme 3) (Ubiquitin-activating enzyme 3), Q7ZVX6, E1 NEDD8-activating enzyme | NEDD8-activating enzyme E1 catalytic subunit of the dimeric uba3-nae1 E1 enzyme_protein modification | Ubiquitin_Ubl conjugation pathway | Nucleus | 0 | 0.0036551405064490037 | 0 | 0.002642994040893298 | 0 | 1 | 0 | 1 | ||||||||||
Pcordatum_s12076_g74225 | A0A812UZA1, Cand1 protein | Cullin-associated NEDD8-dissociated protein 1_Factor of SCF E3 ubiquitin ligase complexes_protein ubiquitination/neddylation | Ubiquitin_Ubl conjugation pathway | Nucleus | 0 | 0 | 0 | 0.004472810156107802 | 0 | 0 | 0 | 1 | ||||||||||
Pcordatum_s3496_g41259 | P34600, WW domain-containing protein ZK1098.1, P46934, HECT-type E3 ubiquitin transferase | E3 ubiquitin-protein ligase NEDD4 | Ubiquitin_Ubl conjugation pathway | Nucleus | 0.01872008129863878 | 0.03055602920145039 | 0 | 0 | 1 | 1 | 0 | 0 | ||||||||||
Pcordatum_s519_g12270 | A7Y521, COP9 signalosome complex subunit 4 (SGN4) (Signalosome subunit 4) | COP9 signalosome complex subunit 4_component of the COP9 signalosome complex (CSN)_protein deneddylation | Ubiquitin_Ubl conjugation pathway | Nucleus | 0 | 0 | 0 | 0.003350915190070115 | 0 | 0 | 0 | 1 | ||||||||||
Pcordatum_s2276_g32139 | Q54QX3, COP9 signalosome complex subunit 1 (Signalosome subunit 1) | COP9 signalosome complex subunit 1_component of the COP9 signalosome complex (CSN)_protein deneddylation | Ubiquitin_Ubl conjugation pathway | Nucleus | 0 | 0 | 0 | 9.237849535636759E-4 | 0 | 0 | 0 | 1 | ||||||||||
Sum | 0.01872008129863878 | 0.07843188811336962 | 0 | 0.014274892681246428 | 1 | 3 | 0 | 5 | ||||||||||||||
Nuclei | 5.494394239223188 | |||||||||||||||||||||
Further proteins | ||||||||||||||||||||||
Pcordatum_s3561_g41676 | A5GA37, Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE (EC 2.1.1.163) (EC 2.1.1.201) (2-methoxy-6-polyprenyl-1,4-benzoquinol methylase) (Demethylmenaquinone methyltransferase), A5GA37, demethylmenaquinone methyltransferase;2-methoxy-6-polyprenyl-1,4-benzoquinol methylase | Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE_Ubiquinone biosynthesis | Ubiquitin_Ubl conjugation pathway | Nucleus | 0.03075441927633514 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | ||||||||||
Pcordatum_s1322_g22866 | Q1ZXC9, Ubiquitin-fold modifier-conjugating enzyme 1 (Ufm1-conjugating enzyme 1) | Ubiquitin-fold modifier-conjugating enzyme 1_protein K69-linked ufmylation | Ubiquitin_Ubl conjugation pathway | Nucleus | 0 | 0.0011231433153380444 | 0 | 0 | 0 | 1 | 0 | 0 | ||||||||||
Pcordatum_s6068_g55327 | P18101, Ubiquitin-60S ribosomal protein L40 (CEP52) [Cleaved into: Ubiquitin; 60S ribosomal protein L40], Q7KTX7, RBR-type E3 ubiquitin transferase | Ubiquitin-60S ribosomal protein L40_cellular protein modification process | Ubiquitin_Ubl conjugation pathway_Ribonucleoprotein_cellular protein modification process | Nucleus | 0 | 0.06867218299467019 | 0 | 0.032289445296705584 | 0 | 1 | 0 | 1 | ||||||||||
Pcordatum_s2335_g32680 | A0PGB3, S-phase kinase-associated protein 1 homolog (Telomerase-associated protein of 20 kDa) (p20) | SKP1_component of the SCF (SKP1-CUL1-F-box protein) ubiquitin ligase complex_cell cycle progression, signal transduction and transcription | Ubiquitin_Ubl conjugation pathway | Nucleus | 0 | 0.04839468672689423 | 0 | 0.01999079983612801 | 0 | 1 | 0 | 1 | ||||||||||
Pcordatum_s2307_g32419 | Q6DKJ4, Nucleoredoxin (EC 1.8.1.8), Q6DKJ4, protein-disulfide reductase | Ubiquitin_pathway_Cell_Differentiation/nuclear protein | Ubiquitin_pathway_Cell_Differentiation/nuclear protein | Nucleus | 0 | 0.025180767131239283 | 0 | 0.009156616141400554 | 0 | 1 | 0 | 1 | ||||||||||
Pcordatum_s5640_g53336 | Q6DKJ4, Nucleoredoxin (EC 1.8.1.8), Q6DKJ4, protein-disulfide reductase | Ubiquitin_pathway_Cell_Differentiation/nuclear protein | Ubiquitin_pathway_Cell_Differentiation/nuclear protein | Nucleus | 0 | 0.014747441382448646 | 0 | 0.004392111787009887 | 0 | 1 | 0 | 1 | ||||||||||
Sum | 0.03075441927633514 | 0.1581182215505904 | 0 | 0.06582897306124404 | 1 | 5 | 0 | 4 | ||||||||||||||
Nuclei | 2.4019548566173894 |
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relative share | No. of proteins | relative share | No. of proteins | |||||||||||||||||||
Accession | Protein function | Protein function (translated) | Biological process | Kategory | Nuclei_geLC | Nuclei_SG | Cell_geLC | Cell_SG | Nuclei_geLC | Nuclei_SG | Cell_geLC | Cell_SG | Nuclei_geLC | Nuclei_SG | Cell_geLC | Cell_SG | Nuclei_geLC | Nuclei_SG | Cell_geLC | Cell_SG | ||
Sum total | 0.1631321370309951 | 0.15913604049940888 | 0.08619473741948627 | 0.4330843496332041 | 3 | 20 | 9 | 23 | ||||||||||||||
Proteasome subunits | 1.8925997330565032 | 0.367448144072136 | ||||||||||||||||||||
Pcordatum_s2212_g31602 | P85200, 26S proteasome regulatory subunit 6B homolog, D1C4U5, Hydrolases acting on peptide bonds (peptidases) metalloendopeptidases | 19S RPT3 (Rpt3, O74894, PRS6B_SCHPO)_26S proteasome regulatory subunit 6B homolog | Proteasome | Nucleus | 0.0427887572540315 | 0.02251144297473646 | 0.005485119653967308 | 0.0037024719193188803 | 1 | 1 | 1 | 1 | ||||||||||
Pcordatum_s141_g4689 | Q27562, Proteasome subunit alpha type-1 (Proteasome subunit C2), Q8ZST5, proteasome endopeptidase complex | 20S a1 | Proteasome_proteasomal protein catabolic process_alpha_type | Nucleus | 0 | 0.010275560331604277 | 0.008619473741948627 | 0.045712246392919244 | 0 | 1 | 1 | 1 | ||||||||||
Pcordatum_s766_g16006 | P0DKK4, Proteasome subunit alpha type-4-3 (20S proteasome alpha subunit C) (20S proteasome subunit alpha-3), Q8TW10, proteasome endopeptidase complex | 20S a4 | Proteasome_proteasomal protein catabolic process_alpha_type | Nucleus | 0 | 0.0028089639513102266 | 0.006268708175962638 | 0.009203185935127802 | 0 | 1 | 1 | 1 | ||||||||||
Pcordatum_s1553_g25328 | Q9Z2U1, Proteasome subunit alpha type-5 (Macropain zeta chain) (Multicatalytic endopeptidase complex zeta chain) (Proteasome zeta chain), A9A2U7, proteasome endopeptidase complex | 20S a5 | Proteasome_proteasomal protein catabolic process_alpha_type | Nucleus | 0 | 0.01542185953992452 | 0.005485119653967308 | 0.04909993514179017 | 0 | 1 | 1 | 1 | ||||||||||
Pcordatum_s5884_g54489 | O23715, Proteasome subunit alpha type-3 (20S proteasome alpha subunit G-1) (DiDi 17A-2a) (Proteasome component 8) (Proteasome subunit alpha type-7), Q8TW10, proteasome endopeptidase complex | 20S a3 | Proteasome_proteasomal protein catabolic process_alpha_type | Nucleus | 0 | 0.010684401869983812 | 0.005485119653967308 | 0.05536688804684956 | 0 | 1 | 1 | 1 | ||||||||||
Pcordatum_s9211_g66893 | P60901, Proteasome subunit alpha type-6 (Macropain iota chain) (Multicatalytic endopeptidase complex iota chain) (Proteasome iota chain), A3MS44, proteasome endopeptidase complex | 20S a6 | Proteasome_proteasomal protein catabolic process_alpha_type | Nucleus | 0 | 0.005325525362403274 | 0 | 0.02499305881218348 | 0 | 1 | 0 | 1 | ||||||||||
Pcordatum_s492_g11827 | Q5VRG3, Proteasome subunit alpha type-4-2 (20S proteasome alpha subunit C) (20S proteasome subunit alpha-3), Q8TW10, proteasome endopeptidase complex | 20S a4 | Proteasome_proteasomal protein catabolic process_alpha_type | Nucleus | 0 | 0.0037928154837905364 | 0 | 0.012903826712071973 | 0 | 1 | 0 | 1 | ||||||||||
Pcordatum_s5438_g52296 | Q9CWH6, Proteasome subunit alpha type-8 (Proteasome alpha 4 subunit) (Alpha4s) (Proteasome subunit alpha-type 7-like), C7P6N4, proteasome endopeptidase complex | 20S a7 | Proteasome_proteasomal protein catabolic process_alpha_type | Nucleus | 0 | 0.0033751358919390253 | 0 | 0.02341933134907688 | 0 | 1 | 0 | 1 | ||||||||||
Pcordatum_s1505_g24809 | Q10KF0, Proteasome subunit alpha type-2 (20S proteasome alpha subunit B) (20S proteasome subunit alpha-2), Q8TW10, proteasome endopeptidase complex | 20S a2 | Proteasome_proteasomal protein catabolic process_alpha_type | Nucleus | 0.006685743320942422 | 0.014918112242768816 | 0.009403062263943957 | 0.05617146035692374 | 1 | 1 | 1 | 1 | ||||||||||
Pcordatum_s3585_g41835 | Q7DLR9, Proteasome subunit beta type-4 (20S proteasome beta subunit G-1) (Proteasome component H) (Proteasome subunit beta type-7), A3MXQ6, proteasome endopeptidase complex | 20S b4 | Proteasome_proteasomal protein catabolic process_alpha_type | Nucleus | 0 | 0.009561410809873752 | 0.004701531131971979 | 0.023782545597888113 | 0 | 1 | 1 | 1 | ||||||||||
Pcordatum_s542_g12629 | Q86A21, Proteasome subunit beta type-1, Q5B7I7, proteasome endopeptidase complex | 20S b1 | Proteasome_proteasomal protein catabolic process_beta_type | Nucleus | 0 | 0 | 0.005485119653967308 | 0.01317051036903109 | 0 | 0 | 1 | 1 | ||||||||||
Pcordatum_s1126_g20627 | Q09720, Probable proteasome subunit beta type-4, A5UM14, proteasome endopeptidase complex | 20S b4 | Proteasome_proteasomal protein catabolic process_beta_type | Nucleus | 0 | 0.0035479818269446677 | 0 | 0.013677653915607775 | 0 | 1 | 0 | 1 | ||||||||||
Pcordatum_s1026_g19439 | O65084, Proteasome subunit beta type-3 (20S proteasome alpha subunit C) (20S proteasome subunit beta-3), A8AB58, proteasome endopeptidase complex | 20S b3 | Proteasome_proteasomal protein catabolic process_beta_type | Nucleus | 0 | 0.0023159470226028593 | 0 | 0.030289581614298663 | 0 | 1 | 0 | 1 | ||||||||||
Pcordatum_s679_g14754 | O24361, Proteasome subunit beta type-5 (EC 3.4.25.1) (20S proteasome subunit E) (Proteasome epsilon chain), O24361, proteasome endopeptidase complex | 20S b5 | Proteasome_proteasomal protein catabolic process_beta_type | Nucleus | 0 | 0.0010801420888062296 | 0 | 0.009095728773550039 | 0 | 1 | 0 | 1 | ||||||||||
Pcordatum_s2479_g33861 | Q9Z2X2, 26S proteasome non-ATPase regulatory subunit 10 (26S proteasome regulatory subunit p28) (Gankyrin), Q80SY4, RING-type E3 ubiquitin transferase | 19S RPN10 (Rpn10, O94444, RPN10_SCHPO | Proteasome_Apoptosis_nucleus | Nucleus | 0.11365763645602117 | 0.013593926774252437 | 0.03526148348978984 | 0.012976846340100621 | 1 | 1 | 1 | 1 | ||||||||||
Pcordatum_s2306_g32411 | O75832, 26S proteasome non-ATPase regulatory subunit 10 (26S proteasome regulatory subunit p28) (Gankyrin) (p28(GANK)), Q3UES3, Transferases glycosyltransferases pentosyltransferases;NAD+ ADP-ribosyltransferase | 19S RPN10 | Proteasome_Apoptosis_nucleus | Nucleus | 0 | 0 | 0 | 2.234822609335014E-4 | 0 | 0 | 0 | 1 | ||||||||||
Pcordatum_s373_g9671 | Q9SSB5, 26S proteasome regulatory subunit 7 homolog A (26S proteasome AAA-ATPase subunit RPT1a) (26S proteasome subunit 7 homolog A) (Regulatory particle triple-A ATPase subunit 1a), D3F124, Hydrolases acting on peptide bonds (peptidases) metalloendopeptidases | 19S RPT1 (Rpt1, O42931, PRS7_SCHPO) | Proteasome_ubiquitin-dependent protein catabolic process_nuclear proteosome complex | Nucleus | 0 | 0.02665539526550092 | 0 | 0.015238420206350153 | 0 | 1 | 0 | 1 | ||||||||||
Pcordatum_s5938_g54730 | F6XBL2, 26S proteasome non-ATPase regulatory subunit 11 (26S proteasome regulatory subunit RPN6) | 19S RNP6 | Proteasome_ubiquitin-dependent protein catabolic process_nuclear proteosome complex | Nucleus | 0 | 0.007608266244807903 | 0 | 0.010613693053229187 | 0 | 1 | 0 | 1 | ||||||||||
Pcordatum_s1561_g25409 | O48844, 26S proteasome non-ATPase regulatory subunit 1 homolog A (26S proteasome regulatory subunit RPN2a) (AtRPN2a) (26S proteasome regulatory subunit S1 homolog A), Q9ZT94, Hydrolases acting on peptide bonds (peptidases) aspartic endopeptidases;RNA-directed DNA polymerase | 19S RNP2 | Proteasome_ubiquitin-dependent protein catabolic process_nuclear proteosome complex | Nucleus | 0 | 0.00251308129159629 | 0 | 0.0035925656990095063 | 0 | 1 | 0 | 1 | ||||||||||
Pcordatum_s18518_g83872 | Q54NQ0, 26S proteasome non-ATPase regulatory subunit 13 (26S proteasome regulatory subunit RPN9) (26S proteasome regulatory subunit S11) | 19S RNP9 | Proteasome_ubiquitin-dependent protein catabolic process_nuclear proteosome complex | Nucleus | 0 | 0.0016017394988807213 | 0 | 0.00645978802180378 | 0 | 1 | 0 | 1 | ||||||||||
Pcordatum_s5553_g52902 | Q9C5U3, 26S proteasome regulatory subunit 8 homolog A (26S proteasome AAA-ATPase subunit RPT6a) (26S proteasome subunit 8 homolog A) (Regulatory particle triple-A ATPase subunit 6a), B0K657, Hydrolases acting on peptide bonds (peptidases) metalloendopeptidases | 19S RPT6 (Rpt6, P41836, PRS8_SCHPO) | Proteasome_ubiquitin-dependent protein catabolic process_nuclear proteosome complex | Nucleus | 0 | 0.001207021445458861 | 0 | 0.0072633807083853155 | 0 | 1 | 0 | 1 | ||||||||||
Pcordatum_s10166_g69583 | Q9D8W5, 26S proteasome non-ATPase regulatory subunit 12 (26S proteasome regulatory subunit RPN5) (26S proteasome regulatory subunit p55) | 19S RNP5 | Proteasome_ubiquitin-dependent protein catabolic process_nuclear proteosome complex | Nucleus | 0 | 3.3731058222325833E-4 | 0 | 0.005546552859699352 | 0 | 1 | 0 | 1 | ||||||||||
Pcordatum_s114_g3952 | O48844, 26S proteasome non-ATPase regulatory subunit 1 homolog A (26S proteasome regulatory subunit RPN2a) (AtRPN2a) (26S proteasome regulatory subunit S1 homolog A) | 19S RNP2 | Proteasome_ubiquitin-dependent protein catabolic process_nuclear proteosome complex | Nucleus | 0 | 0 | 0 | 5.811955470552706E-4 | 0 | 0 | 0 | 1 | ||||||||||
Sum | 0.1631321370309951 | 0.15913604049940888 | 0.08619473741948627 | 0.4330843496332041 | 3 | 20 | 9 | 23 | ||||||||||||||
1.8925997330565032 | 0.367448144072136 | |||||||||||||||||||||
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relative share | No. of proteins | relative share | No. of proteins | |||||||||||||||||||
Accession | Protein function | Protein function (translated) | Biological process | Kategory | Nuclei_geLC | Nuclei_SG | Cell_geLC | Cell_SG | Nuclei_geLC | Nuclei_SG | Cell_geLC | Cell_SG | Nuclei_geLC | Nuclei_SG | Cell_geLC | Cell_SG | Nuclei_geLC | Nuclei_SG | Cell_geLC | Cell_SG | ||
Sum total | 1.3919717594202126 | 0.34973900682769804 | 0.10970239307934616 | 0.26916939128718226 | 11 | 16 | 6 | 17 | ||||||||||||||
small nucleolar ribonucleoproteins | 12.688617999549193 | 1.299326811102955 | ||||||||||||||||||||
Pcordatum_s2069_g30290 | Q60YI3, Putative H/ACA ribonucleoprotein complex subunit 2-like protein, P62426, ribonuclease P | H/ACA ribonucleoprotein complex subunit 2_subunit of H/ACA small nucleolar ribonucleoprotein (H/ACA snoRNP) complex | Ribonucleoprotein_Ribosomebiogenesis_rRNA-processing | Nucleus | 0.00936004064931939 | 0.0015719989776813443 | 7.835885219953298E-4 | 0 | 1 | 1 | 1 | 0 | ||||||||||
Pcordatum_s2069_g30291 | Q60YI3, Putative H/ACA ribonucleoprotein complex subunit 2-like protein, P62426, ribonuclease P | H/ACA ribonucleoprotein complex subunit 2_subunit of H/ACA small nucleolar ribonucleoprotein (H/ACA snoRNP) complex | Ribonucleoprotein_Ribosomebiogenesis_rRNA-processing | Nucleus | 0 | 0.023751525555414526 | 0 | 0.00588851681428553 | 0 | 1 | 0 | 1 | ||||||||||
Pcordatum_s970_g18748 | Q9LD90, H/ACA ribonucleoprotein complex subunit 4 (EC 5.4.99.-) (CBF5 homolog) (Dyskerin) (Nopp-140-associated protein of 57 kDa homolog) (AtNAP57) (Nucleolar protein NAP57 homolog), Q9LD90, Isomerases intramolecular transferases transferring other groups | H/ACA ribonucleoprotein complex subunit 4_subunit of H/ACA small nucleolar ribonucleoprotein (H/ACA snoRNP) complex | Ribonucleoprotein_Ribosomebiogenesis_rRNA-processing | Nucleus | 0.7220602786617816 | 0.001782299698770843 | 0.02742559826983654 | 0.0017960718536755682 | 1 | 1 | 1 | 1 | ||||||||||
Pcordatum_s2209_g31576 | A0A7S1M3B8, H/ACA ribonucleoprotein complex subunit (Fragment) | H/ACA ribonucleoprotein complex subunit fragment_subunit of H/ACA small nucleolar ribonucleoprotein (H/ACA snoRNP) complex | Ribonucleoprotein_Ribosomebiogenesis_rRNA-processing | Nucleus | 0 | 0.006302061393691442 | 0 | 0 | 0 | 1 | 0 | 0 | ||||||||||
Pcordatum_s1336_g23010 | O43102, H/ACA ribonucleoprotein complex subunit cbf5 (EC 5.4.99.-) (Centromere-binding factor 5) (H/ACA snoRNP protein cbf5) (Small nucleolar RNP protein cbf5), O43102, Isomerases intramolecular transferases transferring other groups | H/ACA ribonucleoprotein complex subunit cbf5_subunit of H/ACA small nucleolar ribonucleoprotein (H/ACA snoRNP) complex | Ribonucleoprotein_DNA-binding_RNA-processing | Nucleus | 0 | 0.005193788338953086 | 0.04701531131971978 | 0.011662342324278386 | 0 | 1 | 1 | 1 | ||||||||||
Pcordatum_s6927_g58915 | Q9P7S7, Nucleolar protein 58 | Nucleolar protein_Required for pre-18S rRNA processing_Nucleolus_processing factors | Ribonucleoprotein_Ribosomebiogenesis_rRNA-processing | Nucleus | 0.41451608589843014 | 0.04545108565255318 | 0.004701531131971979 | 0.016445693127554464 | 1 | 1 | 1 | 1 | ||||||||||
Pcordatum_s15129_g79832 | A0A0F8CDX6, Nucleolar protein 56 (Fragment) | Nucleolar protein_Required for pre-18S rRNA processing_Nucleolus_processing factors | Ribonucleoprotein_Ribosomebiogenesis_rRNA-processing | Nucleus | 0.06685743320942422 | 0.04401009867342687 | 0 | 0.017659521990594163 | 1 | 1 | 0 | 1 | ||||||||||
Pcordatum_s5413_g52184 | Q8N5L8, Ribonuclease P protein subunit p25-like protein (RNase P protein subunit-like p25) (Rpp25-like protein), Q9BUL9, ribonuclease P | Ribonuclease P protein subunit p25-like protein | Ribonuclease_ rRNA/tRNA processing | Nucleus | 0.0427887572540315 | 0.012906240661195176 | 0 | 0.0340765799699021 | 1 | 1 | 0 | 1 | ||||||||||
Pcordatum_s6625_g57706 | Q91WE3, Ribonuclease P protein subunit p25 (RNase P protein subunit p25) (EC 3.1.26.5), Q91WE3, ribonuclease P | Ribonuclease P protein subunit p25-like protein | Ribonuclease_ rRNA/tRNA processing | Nucleus | 0.029417270612146655 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | ||||||||||
Pcordatum_s6625_g57707 | Q91WE3, Ribonuclease P protein subunit p25 (RNase P protein subunit p25) (EC 3.1.26.5), Q91WE3, ribonuclease P | Ribonuclease P protein subunit p25-like protein | Ribonuclease_ rRNA/tRNA processing | Nucleus | 0 | 0.02733430857732677 | 0 | 0.039499172779955294 | 0 | 1 | 0 | 1 | ||||||||||
Pcordatum_s14031_g78007 | Q2KIR4, Ribonuclease P protein subunit p25-like protein (RNase P protein subunit-like p25) (Rpp25-like protein), Q9BUL9, ribonuclease P | Ribonuclease P protein subunit p25-like protein | Ribonuclease_ rRNA/tRNA processing | Nucleus | 0 | 0.00797215623968765 | 0 | 0.011409147329256446 | 0 | 1 | 0 | 1 | ||||||||||
Pcordatum_s3713_g42667 | Q99JH1, Ribonuclease P protein subunit p25-like protein (RNase P protein subunit-like p25) (Rpp25-like protein), Q9BUL9, ribonuclease P | Ribonuclease P protein subunit p25-like protein | Ribonuclease_ rRNA/tRNA processing | Nucleus | 0 | 0 | 0 | 0.004457512958491893 | 0 | 0 | 0 | 1 | ||||||||||
Pcordatum_s2577_g34655 | Q9WZI1, Ribonuclease R (RNase R) (EC 3.1.13.1) (VacB protein homolog), Q9SHL7, Hydrolases acting on ester bonds endoribonucleases producing 5\'-phosphomonoesters | Ribonuclease P protein subunit p25-like protein | Ribonuclease_ rRNA/tRNA processing | Nucleus | 0 | 0 | 0 | 0.0010709922222468182 | 0 | 0 | 0 | 1 | ||||||||||
Pcordatum_s172_g5388 | Q9U3U0, 60S acidic ribosomal protein P0 (CcP0), P19889, Hydrolases acting on ester bonds | Ribosome biogenesis | Translation | Nucleus | 0.020057229962827265 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | ||||||||||
Pcordatum_s14390_g78628 | Q9U3U0, 60S acidic ribosomal protein P0 (CcP0), P19889, Hydrolases acting on ester bonds | Ribosome biogenesis | Translation | Nucleus | 0.016045783970261813 | 0.09886801982820614 | 0.021940478615869233 | 0.1039184600997187 | 1 | 1 | 1 | 1 | ||||||||||
Pcordatum_s1690_g26702 | Q9DG68, 60S acidic ribosomal protein P0 (60S ribosomal protein L10E), P19889, Hydrolases acting on ester bonds | Ribosome biogenesis | Translation | Nucleus | 0.025405824619581203 | 0.0031681412843714467 | 0 | 0.012144091015699594 | 1 | 1 | 0 | 1 | ||||||||||
Pcordatum_s497_g11913 | O04204, 60S acidic ribosomal protein P0-1, P19889, Hydrolases acting on ester bonds | Ribosome biogenesis | Translation | Nucleus | 0 | 0.0010238076544524613 | 0 | 0.003368322345977873 | 0 | 1 | 0 | 1 | ||||||||||
Pcordatum_s16388_g81544 | A0A3B0W1N6, SSU ribosomal protein S1p | Ribosome biogenesis_structural constituent of ribosome | Translation | Nucleus | 0 | 0 | 0 | 0.0021804911833198893 | 0 | 0 | 0 | 1 | ||||||||||
Pcordatum_s20102_g85041 | H9L427, 50S ribosomal subunit assembly factor BipA (EC 3.6.5.-) (GTP-binding protein BipA) (Ribosome-dependent GTPase BipA), H9L427, Hydrolases acting on acid anhydrides acting on GTP to facilitate cellular and subcellular movement | Ribosome biogenesis_Hydrolase, RNA-binding, rRNA-binding, tRNA-binding | Translation | Nucleus | 0 | 0 | 0 | 0.002170167458820483 | 0 | 0 | 0 | 1 | ||||||||||
Pcordatum_s1621_g25999 | O74945, Ribosome assembly protein 1 (EC 3.6.5.-) (EF-2 like GTPase) (Elongation factor-like 1), A4SFN5, Elongation factor 4. | Ribosome assembly protein 1_EF-2 like GTPase | Translation_Proteinbiosynthesis | Nucleus | 0 | 0 | 0.007835885219953298 | 0 | 0 | 0 | 1 | 1 | ||||||||||
Pcordatum_s1876_g28539 | B0G104, 60S ribosome subunit biogenesis protein NIP7 homolog | Ribosome_biosgenesis_structural constituent of ribosome, 60S ribosomal protein NIP7 | Translation | Nucleus | 0.010697189313507875 | 5.875964262807147E-4 | 0 | 0 | 1 | 1 | 0 | 0 | ||||||||||
Pcordatum_s912_g17996 | A0A7S1WFB2, Hypothetical protein (Fragment), Q9NRR4, ribonuclease III | Ribonuclease III_Ribosome biogenesis, RNA-mediated gene silencing | Ribonuclease_ rRNA/tRNA processing | Nucleus | 0 | 0.06945158475696493 | 0 | 0 | 0 | 1 | 0 | 0 | ||||||||||
Pcordatum_s119_g4084 | P10775, Ribonuclease inhibitor (Ribonuclease/angiogenin inhibitor 1), Q9C000, Hydrolases acting on peptide bonds (peptidases);Hydrolases acting on acid anhydrides acting on acid anhydrides to facilitate cellular and subcellular movement | Ribonuclease inhibitor | Ribonuclease_ rRNA/tRNA processing | Nucleus | 0.034765865268900596 | 3.642931087214545E-4 | 0 | 0.0014223078134050866 | 1 | 1 | 0 | 1 | ||||||||||
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relative share | No. of proteins | relative share | No. of proteins | |||||||||||||||||||
Accession | Protein function | Protein function (translated) | Biological process | Kategory | Nuclei_geLC | Nuclei_SG | Cell_geLC | Cell_SG | Nuclei_geLC | Nuclei_SG | Cell_geLC | Cell_SG | Nuclei_geLC | Nuclei_SG | Cell_geLC | Cell_SG | Nuclei_geLC | Nuclei_SG | Cell_geLC | Cell_SG | ||
Sum total | 2.931029871901157 | 2.027390666952003 | 0.8784027331567648 | 3.3461985666978187 | 66 | 91 | 54 | 107 | ||||||||||||||
30S consituents | 3.336772258628741 | 0.605878768561163 | ||||||||||||||||||||
Pcordatum_s1647_g26264 | Q9Z8M3, 30S ribosomal protein S1, Q8RI52, 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase | structural constituent of ribosome | Translation | Nucleus/Nucleolus/ER/Cytoplasm | 0.01203433797769636 | 0.02289606868161773 | 0.010186650785939288 | 0.04868751365138688 | 1 | 1 | 1 | 1 | ||||||||||
Pcordatum_s763_g15956 | Q4L6I1, 30S ribosomal protein S1, Q895G2, 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase | structural constituent of ribosome, 30S ribosomal protein S1 | Translation | Nucleus/Nucleolus/ER/Cytoplasm | 0.013371486641884844 | 0.10886393805774802 | 0.006268708175962638 | 0.08441264924810295 | 1 | 1 | 1 | 1 | ||||||||||
Pcordatum_s4495_g47378 | Q49XT0, 30S ribosomal protein S1, Q895G2, 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase | structural constituent of ribosome, 30S ribosomal protein S1 | Translation | Nucleus/Nucleolus/ER/Cytoplasm | 0 | 0.06533271832757294 | 0 | 0.05306545104001473 | 0 | 1 | 0 | 1 | Information: | |||||||||
Pcordatum_s8976_g66169 | P38494, 30S ribosomal protein S1 homolog, Q97I09, 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase | structural constituent of ribosome, 30S ribosomal protein S1 | Translation | Nucleus/Nucleolus/ER/Cytoplasm | 0 | 0.15962438101754245 | 0.009403062263943957 | 0.12798705575745897 | 0 | 1 | 1 | 1 | Ribosomes are assigned to Translation for functional categorization | |||||||||
Pcordatum_s1420_g23927 | P38494, 30S ribosomal protein S1 homolog, Q8RI52, 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase | structural constituent of ribosome, 30S ribosomal protein S1 | Translation | Nucleus/Nucleolus/ER/Cytoplasm | 0 | 0.013328495160135134 | 0 | 0.01808309611768295 | 0 | 1 | 0 | 1 | ||||||||||
Pcordatum_s3905_g43819 | P38494, 30S ribosomal protein S1 homolog, Q895G2, 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase | structural constituent of ribosome, 30S ribosomal protein S1 | Translation | Nucleus/Nucleolus/ER/Cytoplasm | 0 | 0.06623174919756872 | 0 | 0.045757459784887454 | 0 | 1 | 0 | 1 | ||||||||||
Pcordatum_s10643_g70854 | B9JCL9, 30S ribosomal protein S16 | structural constituent of ribosome, 30S ribosomal protein S16 | Translation | Nucleus/Nucleolus/ER/Cytoplasm | 0.005348594656753938 | 5.620465489753506E-4 | 0.018022536005892584 | 0.011989310503861777 | 1 | 1 | 1 | 1 | ||||||||||
Pcordatum_s6675_g57914 | A6UVG8, 30S ribosomal protein S17e | structural constituent of ribosome, 30S ribosomal protein S17 | Translation | Nucleus/Nucleolus/ER/Cytoplasm | 0.00936004064931939 | 0.005883649526695821 | 0 | 0.015356728582000287 | 1 | 1 | 0 | 1 | ||||||||||
Pcordatum_s3280_g39778 | A4YCX0, 30S ribosomal protein S19 | structural constituent of ribosome, 30S ribosomal protein S19 | Translation | Nucleus/Nucleolus/ER/Cytoplasm | 0.01203433797769636 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | ||||||||||
Pcordatum_s1536_g25144 | A0T0E0, 30S ribosomal protein S2, chloroplastic | structural constituent of ribosome, 30S ribosomal protein S2 | Translation | Nucleus/Nucleolus/ER/Cytoplasm | 0 | 0 | 0 | 0.002503216839623597 | 0 | 0 | 0 | 1 | ||||||||||
Pcordatum_s2679_g35444 | B7KK85, 30S ribosomal protein S4 | structural constituent of ribosome, 30S ribosomal protein S4 | Translation | Nucleus/Nucleolus/ER/Cytoplasm | 0 | 0.009314199071371765 | 0 | 0.0256863308223626 | 0 | 1 | 0 | 1 | ||||||||||
Pcordatum_s8091_g63307 | P54067, 30S ribosomal protein S6e | structural constituent of ribosome, 30S ribosomal protein S6 | Translation | Nucleus/Nucleolus/ER/Cytoplasm | 0.044125905918219986 | 0 | 0 | 0.004475598315279175 | 1 | 0 | 0 | 1 | ||||||||||
Pcordatum_s75_g2820 | P54067, 30S ribosomal protein S6e | structural constituent of ribosome, 30S ribosomal protein S6 | Translation | Nucleus/Nucleolus/ER/Cytoplasm | 0 | 0 | 0 | 0.002809032687331197 | 0 | 0 | 0 | 1 | ||||||||||
Pcordatum_s6013_g55078 | Q8DMK7, 30S ribosomal protein S9 | structural constituent of ribosome, 30S ribosomal protein S9 | Translation | Nucleus/Nucleolus/ER/Cytoplasm | 0 | 0 | 0 | 6.964972321395174E-4 | 0 | 0 | 0 | 1 | ||||||||||
Sum | 0.09627470382157088 | 0.4520372455892279 | 0.04388095723173847 | 0.441509940582132 | 6 | 9 | 4 | 13 | ||||||||||||||
2.1939973486252202 | 1.023843868596063 | |||||||||||||||||||||
40S consituents | ||||||||||||||||||||||
Pcordatum_s2166_g31187 | P63326, 40S ribosomal protein S10 | structural constituent of ribosome, 40S ribosomal protein S10 | Translation | Nucleus/Nucleolus/ER/Cytoplasm | 0 | 0.004530463062373129 | 0 | 0.021524739514302595 | 0 | 1 | 0 | 1 | ||||||||||
Pcordatum_s1141_g20807 | P62282, 40S ribosomal protein S11 | structural constituent of ribosome, 40S ribosomal protein S11 | Translation | Nucleus/Nucleolus/ER/Cytoplasm | 0 | 0.0032564493166016783 | 0 | 0.011584424578786515 | 0 | 1 | 0 | 1 | ||||||||||
Pcordatum_s297_g8149 | Q9SMI3, 40S ribosomal protein S12 | structural constituent of ribosome, 40S ribosomal protein S12 | Translation | Nucleus/Nucleolus/ER/Cytoplasm | 0 | 0.1924629335939289 | 0.008619473741948627 | 0.1527074778160742 | 0 | 1 | 1 | 1 | ||||||||||
Pcordatum_s3026_g38006 | Q9SMI3, 40S ribosomal protein S12 | structural constituent of ribosome, 40S ribosomal protein S12 | Translation | Nucleus/Nucleolus/ER/Cytoplasm | 0 | 6.478532453172872E-4 | 0 | 0 | 0 | 1 | 0 | 0 | ||||||||||
Pcordatum_s1357_g23252 | P78571, 40S ribosomal protein S13 | structural constituent of ribosome, 40S ribosomal protein S13 | Translation | Nucleus/Nucleolus/ER/Cytoplasm | 0.032091567940523626 | 5.610532648689842E-4 | 0 | 0.003529131310078117 | 1 | 1 | 0 | 1 | ||||||||||
Pcordatum_s4321_g46332 | Q9CAX6, 40S ribosomal protein S14-2 | structural constituent of ribosome, 40S ribosomal protein S14 | Translation | Nucleus/Nucleolus/ER/Cytoplasm | 0 | 0.06599176595727146 | 0 | 0.09928936231870748 | 0 | 1 | 0 | 1 | ||||||||||
Pcordatum_s13257_g76611 | Q29303, 40S ribosomal protein S14 (Fragment) | structural constituent of ribosome, 40S ribosomal protein S14 | Translation | Nucleus/Nucleolus/ER/Cytoplasm | 0.006685743320942422 | 0 | 7.835885219953298E-4 | 4.58350761077662E-4 | 1 | 0 | 1 | 1 | ||||||||||
Pcordatum_s2206_g31545 | P46793, 40S ribosomal protein S15a (Ribosomal protein S24) | structural constituent of ribosome, 40S ribosomal protein S15 | Translation | Nucleus/Nucleolus/ER/Cytoplasm | 0.028080121947958173 | 0.016933028928902118 | 0.0525004309736871 | 0.07415674483664882 | 1 | 1 | 1 | 1 | ||||||||||
Pcordatum_s1194_g21468 | P46793, 40S ribosomal protein S15a (Ribosomal protein S24) | structural constituent of ribosome, 40S ribosomal protein S15 | Translation | Nucleus/Nucleolus/ER/Cytoplasm | 0 | 0 | 0.03917942609976649 | 0 | 0 | 0 | 1 | 0 | ||||||||||
Pcordatum_s2367_g32987 | O65059, 40S ribosomal protein S15 | structural constituent of ribosome, 40S ribosomal protein S15 | Translation | Nucleus/Nucleolus/ER/Cytoplasm | 0.038777311261466045 | 0.005821224883222727 | 0.014104593395915936 | 0.019430455198335413 | 1 | 1 | 1 | 1 | ||||||||||
Pcordatum_s569_g13076 | P46293, 40S ribosomal protein S16 | structural constituent of ribosome, 40S ribosomal protein S16 | Translation | Nucleus/Nucleolus/ER/Cytoplasm | 0.026742973283769688 | 0.009329257838444195 | 0 | 0.03620763784467009 | 1 | 1 | 0 | 1 | ||||||||||
Pcordatum_s12535_g75200 | Q4MYY1, 40S ribosomal protein S17 | structural constituent of ribosome, 40S ribosomal protein S17 | Translation | Nucleus/Nucleolus/ER/Cytoplasm | 0.01203433797769636 | 0 | 0.0023507655659859893 | 0 | 1 | 0 | 1 | 0 | ||||||||||
Pcordatum_s3694_g42540 | Q4MYY1, 40S ribosomal protein S17 | structural constituent of ribosome, 40S ribosomal protein S17 | Translation | Nucleus/Nucleolus/ER/Cytoplasm | 0 | 0.0033959441064300567 | 0 | 0.0023905827446654747 | 0 | 1 | 0 | 1 | ||||||||||
Pcordatum_s12903_g75930 | Q8IT98, 40S ribosomal protein S18 | structural constituent of ribosome, 40S ribosomal protein S18 | Translation | Nucleus/Nucleolus/ER/Cytoplasm | 0.016045783970261813 | 0 | 0.014104593395915936 | 0 | 1 | 0 | 1 | 0 | ||||||||||
Pcordatum_s2620_g34992 | Q8ISP0, 40S ribosomal protein S18 | structural constituent of ribosome, 40S ribosomal protein S18 | Translation | Nucleus/Nucleolus/ER/Cytoplasm | 0.0427887572540315 | 0.018562304873300933 | 0 | 0.029725695260801887 | 1 | 1 | 0 | 1 | ||||||||||
Pcordatum_s341_g9062 | Q9LF30, 40S ribosomal protein S19-2 | structural constituent of ribosome, 40S ribosomal protein S19 | Translation | Nucleus/Nucleolus/ER/Cytoplasm | 0.028080121947958173 | 0.030808700377412915 | 0 | 0.07600672612468114 | 1 | 1 | 0 | 1 | ||||||||||
Pcordatum_s5928_g54689 | Q93VB8, 40S ribosomal protein S2-2 | structural constituent of ribosome, 40S ribosomal protein S2 | Translation | Nucleus/Nucleolus/ER/Cytoplasm | 0 | 0.0011141675071359896 | 0 | 0.005562754325154625 | 0 | 1 | 0 | 1 | ||||||||||
Pcordatum_s13364_g76803 | Q9LF30, 40S ribosomal protein S19-2 | structural constituent of ribosome, 40S ribosomal protein S20 | Translation | Nucleus/Nucleolus/ER/Cytoplasm | 0 | 0 | 0 | 0.009286755354615699 | 0 | 0 | 0 | 1 | ||||||||||
Pcordatum_s4121_g45156 | P23403, 40S ribosomal protein S20 (S22) | structural constituent of ribosome, 40S ribosomal protein S20 | Translation | Nucleus/Nucleolus/ER/Cytoplasm | 0 | 0.043874156505584766 | 0 | 0.06852164908434506 | 0 | 1 | 0 | 1 | ||||||||||
Pcordatum_s280_g7816 | Q9SMI2, 40S ribosomal protein S21 | structural constituent of ribosome, 40S ribosomal protein S21 | Translation | Nucleus/Nucleolus/ER/Cytoplasm | 0 | 0.05452259714076874 | 0 | 0.05936216942811985 | 0 | 1 | 0 | 1 | ||||||||||
Pcordatum_s1556_g25356 | Q962Q7, 40S ribosomal protein S23 | structural constituent of ribosome, 40S ribosomal protein S23 | Translation | Nucleus/Nucleolus/ER/Cytoplasm | 0 | 0.011273629602278634 | 0 | 0.0588165944983702 | 0 | 1 | 0 | 1 | ||||||||||
Pcordatum_s2149_g31025 | Q8LC83, 40S ribosomal protein S24-2 | structural constituent of ribosome, 40S ribosomal protein S24 | Translation | Nucleus/Nucleolus/ER/Cytoplasm | 0 | 0.002413825383449175 | 0 | 0.013237200122184191 | 0 | 1 | 0 | 1 | ||||||||||
Pcordatum_s1546_g25265 | Q03409, 40S ribosomal protein S25 (S31) | structural constituent of ribosome, 40S ribosomal protein S25 | Translation | Nucleus/Nucleolus/ER/Cytoplasm | 0.01203433797769636 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | ||||||||||
Pcordatum_s1282_g22422 | Q03409, 40S ribosomal protein S25 (S31) | structural constituent of ribosome, 40S ribosomal protein S25 | Translation | Nucleus/Nucleolus/ER/Cytoplasm | 0 | 0 | 0.007835885219953298 | 0 | 0 | 0 | 1 | 0 | ||||||||||
Pcordatum_s15992_g81029 | Q03409, 40S ribosomal protein S25 (S31) | structural constituent of ribosome, 40S ribosomal protein S25 | Translation | Nucleus/Nucleolus/ER/Cytoplasm | 0 | 0.03994887172319993 | 0 | 0.035227260795492876 | 0 | 1 | 0 | 1 | ||||||||||
Pcordatum_s255_g7297 | P27085, 40S ribosomal protein S26 | structural constituent of ribosome, 40S ribosomal protein S26 | Translation | Nucleus/Nucleolus/ER/Cytoplasm | 0.017382932634450298 | 0 | 0.0023507655659859893 | 0 | 1 | 0 | 1 | 0 | ||||||||||
Pcordatum_s9444_g67613 | Q9M2F1, 40S ribosomal protein S27-2 | structural constituent of ribosome, 40S ribosomal protein S27 | Translation | Nucleus/Nucleolus/ER/Cytoplasm | 0 | 0.051601834350625174 | 0 | 0.03561986374908344 | 0 | 1 | 0 | 1 | ||||||||||
Pcordatum_s3878_g43641 | Q8L953, 40S ribosomal protein S27-3 | structural constituent of ribosome, 40S ribosomal protein S27 | Translation | Nucleus/Nucleolus/ER/Cytoplasm | 0 | 0.004743330371591486 | 0 | 0 | 0 | 1 | 0 | 0 | ||||||||||
Pcordatum_s562_g12970 | P33286, 40S ribosomal protein S28 (S33) | structural constituent of ribosome, 40S ribosomal protein S28 | Translation | Nucleus/Nucleolus/ER/Cytoplasm | 0.00936004064931939 | 0 | 0.004701531131971979 | 0 | 1 | 0 | 1 | 0 | ||||||||||
Pcordatum_s4793_g49038 | P33286, 40S ribosomal protein S28 (S33) | structural constituent of ribosome, 40S ribosomal protein S28 | Translation | Nucleus/Nucleolus/ER/Cytoplasm | 0 | 0.16014567391716097 | 0 | 0.08953683367116601 | 0 | 1 | 0 | 1 | ||||||||||
Pcordatum_s1586_g25643 | Q9SIP7, 40S ribosomal protein S3-1, P02350, DNA-(apurinic or apyrimidinic site) lyase | structural constituent of ribosome, 40S ribosomal protein S3 | Translation | Nucleus/Nucleolus/ER/Cytoplasm | 0.06953173053780119 | 0.029045222324920367 | 0 | 0.08159434781541827 | 1 | 1 | 0 | 1 | ||||||||||
Pcordatum_s10196_g69662 | Q9FJA6, 40S ribosomal protein S3-3, P02350, DNA-(apurinic or apyrimidinic site) lyase | structural constituent of ribosome, 40S ribosomal protein S3 | Translation | Nucleus/Nucleolus/ER/Cytoplasm | 0.00936004064931939 | 0 | 0.025074832703850553 | 0 | 1 | 0 | 1 | 0 | ||||||||||
Pcordatum_s2004_g29732 | Q5CP76, 40S ribosomal protein S3a | structural constituent of ribosome, 40S ribosomal protein S3 | Translation | Nucleus/Nucleolus/ER/Cytoplasm | 0.06953173053780119 | 0.020550758150760975 | 0.010970239307934617 | 0.07872480453850296 | 1 | 1 | 1 | 1 | ||||||||||
Pcordatum_s15012_g79653 | P49397, 40S ribosomal protein S3a (CYC07 protein) | structural constituent of ribosome, 40S ribosomal protein S3 | Translation | Nucleus/Nucleolus/ER/Cytoplasm | 0 | 0 | 0.017238947483897253 | 0 | 0 | 0 | 1 | 0 | ||||||||||
Pcordatum_s1637_g26172 | P47961, 40S ribosomal protein S4 | structural constituent of ribosome, 40S ribosomal protein S4 | Translation | Nucleus/Nucleolus/ER/Cytoplasm | 0.09493755515738239 | 0.010465371849156612 | 0.03134354087981319 | 0.03461235866472531 | 1 | 1 | 1 | 1 | ||||||||||
Pcordatum_s647_g14318 | P51427, 40S ribosomal protein S5-2 (AtRPS5A) (Protein ARABIDOPSIS MINUTE-LIKE 1) | structural constituent of ribosome, 40S ribosomal protein S5 | Translation | Nucleus/Nucleolus/ER/Cytoplasm | 0.1363891637472254 | 0 | 0.02350765565985989 | 0 | 1 | 0 | 1 | 0 | ||||||||||
Pcordatum_s5777_g53967 | Q90YR8, 40S ribosomal protein S6 | structural constituent of ribosome, 40S ribosomal protein S6 | Translation | Nucleus/Nucleolus/ER/Cytoplasm | 0.21661808359853446 | 0 | 0.050933253929696436 | 0 | 1 | 0 | 1 | 0 | ||||||||||
Pcordatum_s3276_g39755 | Q90YR8, 40S ribosomal protein S6 | structural constituent of ribosome, 40S ribosomal protein S6 | Translation | Nucleus/Nucleolus/ER/Cytoplasm | 0 | 0.009299024300316108 | 0 | 0.049250194314431166 | 0 | 1 | 0 | 1 | ||||||||||
Pcordatum_s6880_g58731 | P51427, 40S ribosomal protein S5-2 (AtRPS5A) (Protein ARABIDOPSIS MINUTE-LIKE 1) | structural constituent of ribosome, 40S ribosomal protein S6 | Translation | Nucleus/Nucleolus/ER/Cytoplasm | 0.11365763645602117 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | ||||||||||
Pcordatum_s453_g11134 | Q9ZNS1, 40S ribosomal protein S7, Q9V3G3, peptidylprolyl isomerase | structural constituent of ribosome, 40S ribosomal protein S7 | Translation | Nucleus/Nucleolus/ER/Cytoplasm | 0.10964619046345572 | 0.025783262819115492 | 0.014888181917911265 | 0.03094856680223523 | 1 | 1 | 1 | 1 | ||||||||||
Pcordatum_s5280_g51516 | Q9ZNS1, 40S ribosomal protein S7 | structural constituent of ribosome, 40S ribosomal protein S7 | Translation | Nucleus/Nucleolus/ER/Cytoplasm | 0.05616024389591635 | 0.0011168718499949286 | 0.025074832703850553 | 0.0035136834011556474 | 1 | 1 | 1 | 1 | ||||||||||
Pcordatum_s16353_g81497 | Q9ZNS1, 40S ribosomal protein S7 | structural constituent of ribosome, 40S ribosomal protein S7 | Translation | Nucleus/Nucleolus/ER/Cytoplasm | 0.04680020324659696 | 0.0020539230254927963 | 0.004701531131971979 | 0.00405209954384367 | 1 | 1 | 1 | 1 | ||||||||||
Pcordatum_s7026_g59338 | Q9ZNS1, 40S ribosomal protein S7 | structural constituent of ribosome, 40S ribosomal protein S7 | Translation | Nucleus/Nucleolus/ER/Cytoplasm | 0.04546305458240847 | 0.020314472537429015 | 0.018022536005892584 | 0.040597858204782636 | 1 | 1 | 1 | 1 | ||||||||||
Pcordatum_s3210_g39316 | P51427, 40S ribosomal protein S5-2 (AtRPS5A) (Protein ARABIDOPSIS MINUTE-LIKE 1) | structural constituent of ribosome, 40S ribosomal protein S7 | Translation | Nucleus/Nucleolus/ER/Cytoplasm | 0 | 0.02162524504538497 | 0.014888181917911265 | 0.058368228361352185 | 0 | 1 | 1 | 1 | ||||||||||
Pcordatum_s2158_g31107 | Q4N3P0, 40S ribosomal protein S8 | structural constituent of ribosome, 40S ribosomal protein S8 | Translation | Nucleus/Nucleolus/ER/Cytoplasm | 0.03075441927633514 | 0 | 0.03369430644579918 | 0 | 1 | 0 | 1 | 0 | ||||||||||
Pcordatum_s400_g10175 | Q08069, 40S ribosomal protein S8, O23300, Delta3-Delta2-enoyl-CoA isomerase | structural constituent of ribosome, 40S ribosomal protein S8 | Translation | Nucleus/Nucleolus/ER/Cytoplasm | 0.11633193378439814 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | ||||||||||
Pcordatum_s482_g11652 | Q08069, 40S ribosomal protein S8 | structural constituent of ribosome, 40S ribosomal protein S8 | Translation | Nucleus/Nucleolus/ER/Cytoplasm | 0 | 0.010651268232275097 | 0 | 0.03097343416781774 | 0 | 1 | 0 | 1 | ||||||||||
Pcordatum_s3236_g39475 | Q9LXG1, 40S ribosomal protein S9-1 | structural constituent of ribosome, 40S ribosomal protein S9 | Translation | Nucleus/Nucleolus/ER/Cytoplasm | 0 | 0.005419706096284285 | 0 | 0.014462106266256101 | 0 | 1 | 0 | 1 | ||||||||||
Pcordatum_s8023_g63082 | Q8MPF7, 40S ribosomal protein SA | structural constituent of ribosome, 40S ribosomal protein SA | Translation | Nucleus/Nucleolus/ER/Cytoplasm | 0 | 0 | 0 | 0.01296162449813799 | 0 | 0 | 0 | 1 | ||||||||||
Pcordatum_s1835_g28145 | Q4Z694, 40S ribosomal protein SA | structural constituent of ribosome, 40S ribosomal protein SA | Translation | Nucleus/Nucleolus/ER/Cytoplasm | 0 | 0 | 0.022724067137864564 | 0.008519408737262008 | 0 | 0 | 1 | 1 | ||||||||||
Pcordatum_s120_g4131 | Q4Z694, 40S ribosomal protein SA | structural constituent of ribosome, 40S ribosomal protein SA | Translation | Nucleus/Nucleolus/ER/Cytoplasm | 0 | 0.0701737095525422 | 0 | 0.16921413366713245 | 0 | 1 | 0 | 1 | ||||||||||
Sum | 1.3852860160992702 | 0.9484379017335424 | 0.43959316083938 | 1.519975258320415 | 25 | 33 | 23 | 35 | ||||||||||||||
3.1512911016498517 | 0.6239824605971376 | |||||||||||||||||||||
50S consituents | ||||||||||||||||||||||
Pcordatum_s371_g9630 | P49550, 50S ribosomal protein L12, chloroplastic | structural constituent of ribosome, 50S ribosomal protein L12 | Translation | Nucleus/Nucleolus/ER/Cytoplasm | 0 | 0.00892259137475013 | 0.003134354087981319 | 0.005307072593574435 | 0 | 1 | 1 | 1 | ||||||||||
Pcordatum_s2216_g31629 | Q8DMK9, 50S ribosomal protein L17 | structural constituent of ribosome, 50S ribosomal protein L17 | Translation | Nucleus/Nucleolus/ER/Cytoplasm | 0 | 0.0017135238372161653 | 0 | 0.006131463440461344 | 0 | 1 | 0 | 1 | ||||||||||
Pcordatum_s170_g5347 | B9MQX0, 50S ribosomal protein L19 | structural constituent of ribosome, 50S ribosomal protein L19 | Translation | Nucleus/Nucleolus/ER/Cytoplasm | 0 | 0.003274719943959657 | 0.007052296697957968 | 0.004612218114676429 | 0 | 1 | 1 | 1 | ||||||||||
Pcordatum_s2790_g36276 | O24694, 50S ribosomal protein L22 | structural constituent of ribosome, 50S ribosomal protein L22 | Translation | Nucleus/Nucleolus/ER/Cytoplasm | 0 | 0.0051793603435394435 | 0.05328401949568243 | 0.01620259579007209 | 0 | 1 | 1 | 1 | ||||||||||
Pcordatum_s9178_g66778 | Q748Z1, 50S ribosomal protein L23 | structural constituent of ribosome, 50S ribosomal protein L23 | Translation | Nucleus/Nucleolus/ER/Cytoplasm | 0 | 0.0013957454256684607 | 0 | 0.011191218779969706 | 0 | 1 | 0 | 1 | ||||||||||
Pcordatum_s671_g14644 | Q110B8, 50S ribosomal protein L24 | structural constituent of ribosome, 50S ribosomal protein L24 | Translation | Nucleus/Nucleolus/ER/Cytoplasm | 0 | 0 | 0 | 0.02774866434133891 | 0 | 0 | 0 | 1 | ||||||||||
Pcordatum_s875_g17504 | Q9RY65, 50S ribosomal protein L27 | structural constituent of ribosome, 50S ribosomal protein L27 | Translation | Nucleus/Nucleolus/ER/Cytoplasm | 0 | 5.225979444298096E-4 | 0 | 0.002862844159338687 | 0 | 1 | 0 | 1 | ||||||||||
Pcordatum_s5182_g51006 | Q8DG62, 50S ribosomal protein L28 | structural constituent of ribosome, 50S ribosomal protein L28 | Translation | Nucleus/Nucleolus/ER/Cytoplasm | 0 | 0 | 0 | 0.012670224186902921 | 0 | 0 | 0 | 1 | ||||||||||
Pcordatum_s2823_g36557 | B8I7X9, 50S ribosomal protein L3 | structural constituent of ribosome, 50S ribosomal protein L3 | Translation | Nucleus/Nucleolus/ER/Cytoplasm | 0 | 0 | 0 | 0.010696282849224439 | 0 | 0 | 0 | 1 | ||||||||||
Pcordatum_s6286_g56284 | Q110A8, 50S ribosomal protein L4 | structural constituent of ribosome, 50S ribosomal protein L4 | Translation | Nucleus/Nucleolus/ER/Cytoplasm | 0 | 5.854358520931442E-4 | 0.010186650785939288 | 0.014909794202394596 | 0 | 1 | 1 | 1 | ||||||||||
Pcordatum_s11819_g73675 | B2XTU9, 50S ribosomal protein L5, chloroplastic | structural constituent of ribosome, 50S ribosomal protein L5 | Translation | Nucleus/Nucleolus/ER/Cytoplasm | 0 | 0 | 0 | 0.004900227421513885 | 0 | 0 | 0 | 1 | ||||||||||
Pcordatum_s5310_g51666 | Q5N3N7, 50S ribosomal protein L10 | structural constituent of ribosome, 50S ribosomal protein L50 | Translation | Nucleus/Nucleolus/ER/Cytoplasm | 0 | 0.003834511665511067 | 0 | 0.009803695136118824 | 0 | 1 | 0 | 1 | ||||||||||
Pcordatum_s541_g12614 | C0QQX0, 50S ribosomal protein L9, Q8GY31, protein-tyrosine-phosphatase;arsenate reductase (glutathione/glutaredoxin) | structural constituent of ribosome, 50S ribosomal protein L9 | Translation | Nucleus/Nucleolus/ER/Cytoplasm | 0 | 0.005801939221011526 | 0 | 0.003430965500549819 | 0 | 1 | 0 | 1 | ||||||||||
Sum | 0 | 0.031230425608179402 | 0.07365732106756101 | 0.13046726651613608 | 0 | 9 | 4 | 13 | ||||||||||||||
Cell | 0.23937364859496654 | |||||||||||||||||||||
60S consituents | ||||||||||||||||||||||
Pcordatum_s3770_g43005 | Q7ZV96, 60S ribosomal protein L10 (Protein QM) (Ribosomal protein L10) | structural constituent of ribosome, 60S ribosomal protein L10 | Translation | Nucleus/Nucleolus/ER/Cytoplasm | 0.04680020324659696 | 0.01841497981460485 | 0 | 0.04178018840475116 | 1 | 1 | 0 | 1 | ||||||||||
Pcordatum_s3560_g41670 | B7F845, 60S ribosomal protein L10a | structural constituent of ribosome, 60S ribosomal protein L10 | Translation | Nucleus/Nucleolus/ER/Cytoplasm | 0.04546305458240847 | 0.00313674770641111 | 0.021940478615869233 | 0.08705009711291481 | 1 | 1 | 1 | 1 | ||||||||||
Pcordatum_s1291_g22510 | Q94793, 60S ribosomal protein L11 (Fragment), B4UIA9, Translocases catalysing the translocation of hydrons linked to oxidoreductase reactions | structural constituent of ribosome, 60S ribosomal protein L11 | Translation | Nucleus/Nucleolus/ER/Cytoplasm | 0 | 0 | 0.009403062263943957 | 0 | 0 | 0 | 1 | 0 | ||||||||||
Pcordatum_s178_g5535 | Q7ZV96, 60S ribosomal protein L10 (Protein QM) (Ribosomal protein L10) | structural constituent of ribosome, 60S ribosomal protein L11 | Translation | Nucleus/Nucleolus/ER/Cytoplasm | 0.006685743320942422 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | ||||||||||
Pcordatum_s3471_g41082 | P42795, 60S ribosomal protein L11-1 (L16A) | structural constituent of ribosome, 60S ribosomal protein L11 | Translation | Nucleus/Nucleolus/ER/Cytoplasm | 0.01203433797769636 | 0 | 0.007052296697957968 | 0 | 1 | 0 | 1 | 0 | ||||||||||
Pcordatum_s12445_g75006 | P42795, 60S ribosomal protein L11-1 (L16A) | structural constituent of ribosome, 60S ribosomal protein L11 | Translation | Nucleus/Nucleolus/ER/Cytoplasm | 0 | 0.028443306656960286 | 0 | 0.07824855680977122 | 0 | 1 | 0 | 1 |