Assays

1 Assay visible to you, out of a total of 1

SUSPHIRE - Sustainable Bioproduction of Pheromones for Insect Pest Control in Agriculture

Short Name: 05_As2_tr_limmaDE-R Assay Class: DRY Assay Type: R Title: Assembly2 transcripts differential expression analysis using limma voom package Description: Using output files of mapReadsToAss2 by STAR the counts were analyzed for differential expression in R using limma voom approach. pISA Assay creation date: 2019-06-19 pISA Assay creator: MPE Analyst: MPE Phenodata: ../../phenodata_20190523.txt Featuredata: Data: ../_A_04_mapReadsToAs2-STAR/output/*.counts

Submitter: Marko Petek

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: _I_T31_mealybug

Study: _S_P4_Pcitri_tr2

Organisms: No organisms

SOPs: No SOPs

Data files: _Assay_METADATA.TXT, output/PCA_PC1_top10genes.txt, output/PCA_PC2_top10genes.txt, output/P_citri_alldata_RNAseq_TMMcpms.txt, output/P_citri_alldata_RNAseq_logFC_padj_TMMcpm..., output/P_citri_alldata_RNAseq_logFC_padj_TMMcpm..., output/P_citri_alldata_RNAseq_logFC_padj_counts..., output/P_citri_alldata_RNAseq_logFC_padj_counts..., output/Pcitri_tr2_counts_STAR_bothStr.txt

Snapshots: No snapshots

Created: 16th May 2022 at 10:36, Last updated: 6th Nov 2024 at 15:25

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