Assays

1 Assay visible to you, out of a total of 1

SUSPHIRE - Sustainable Bioproduction of Pheromones for Insect Pest Control in Agriculture

Short Name: 03_mapAs2ToGenome-STAR Assay Class: DRY Assay Type: STAR Title: Mapping assembly2 transcripts to P citri genome Description: Mapping de novo assembled transcripts from SUSPHIRE and Ediburgh RNA-Seq datasets (assembly2) to P citri genome using STARlong. MatchAnnot also run. pISA Assay creation date: 2019-06-19 pISA Assay creator: MPE Phenodata: ../../phenodata_20190523.txt Featuredata: Data:

Submitter: Marko Petek

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: _I_T31_mealybug

Study: _S_P4_Pcitri_tr2

Organisms: No organisms

SOPs: No SOPs

Data files: _Assay_METADATA.TXT, output/PcSpadesTRsofttoGenome_STARlong.Aligned...., output/PcSpadesTRsofttoGenome_STARlong.Aligned...., scripts/STARlong_MatchAnnot_commands_mapAs2ToGe...

Snapshots: No snapshots

Created: 16th May 2022 at 10:36, Last updated: 6th Nov 2024 at 15:25

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