Assays

1 Assay visible to you, out of a total of 1

SUSPHIRE - Sustainable Bioproduction of Pheromones for Insect Pest Control in Agriculture

Short Name: 03-IPS Assay Class: DRY Assay Type: IPS Title: InterProScan for P citri unmapped transcripts Description: Prediction of ORF usning ANGEL (https://github.com/PacificBiosciences/ANGEL) and InterProScan Pfam domain search for all Iso-Seq isoforms that did not map to the P citri genome pISA Assay creation date: 2020-09-21 pISA Assay creator: MPE Phenodata: None Featuredata: Data:

Submitter: Marko Petek

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: _I_T31_mealybug

Study: _S_P4_Pcitri_IsoSeq

Organisms: No organisms

SOPs: No SOPs

Data files: _ASSAY_METADATA.TXT, output/Pcitri.IsoSeq_nonred.dumb.pep.rmstar.tsv, output/Pcitri.ignored_ids.dumb.final.pep.rmstar..., reports/Pcitri.ignored_ids.dumb.final.pep.rmsta..., scripts/IsoSeq_ANGEL_IPS_commands.txt

Snapshots: No snapshots

Created: 16th May 2022 at 10:33, Last updated: 6th Nov 2024 at 15:25

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