Selected Cell
Cell:
Value:
bygroup
bylines
allcombined
A
B
C
D
E
F
G
H
I
J
1
2
3
4
5
6
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41
42
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44
45
46
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53
54
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63
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133
134
| ###GSEA results for SxP; counts were normalized with edgeR; permutation by gene_set; p-value<0.01; FDR<0.05 | |||||||||
| ###The first colum for each contrast gives the tags statistics: The percentage of gene hits before (for positive ES) or after (for negative ES) the peak in the running enrichment score. This gives an indication of the percentage of genes contributing to the enrichment score | |||||||||
| ###The second column gives FDR q-values. Since the permutation by gene_set was used, only gene sets with FDR<0.05 should be considered. | |||||||||
| high-low | high-wt | low-wt | |||||||
| NAME | SIZE | h-l_tag | h-l_FDR | h-wt_tag | h-wt_FDR | l-wt_tag | l-wt_FDR | ||
| 1 PS | 327 | -0.68 | 0 | -0.69 | 0 | -0.63 | 0.076130085 | ||
| 1.1 PS.LIGHTREACTION | 221 | -0.66 | 0 | -0.68 | 0 | -0.56 | 0.09835544 | ||
| 1.1.1 PS.LIGHTREACTION.PHOTOSYSTEM II | 92 | -0.8 | 0 | -0.79 | 0 | -0.62 | 0.32698074 | ||
| 1.1.1.1 PS.LIGHTREACTION.PHOTOSYSTEM II.LHC-II | 38 | -0.92 | 0 | -0.92 | 0 | 0.11 | 0.2636716 | ||
| 1.1.1.2 PS.LIGHTREACTION.PHOTOSYSTEM II.PSII POLYPEPTIDE SUBUNITS | 53 | -0.72 | 0 | -0.74 | 0 | -0.68 | 0.07628681 | ||
| 1.1.2 PS.LIGHTREACTION.PHOTOSYSTEM I | 49 | -0.9 | 0 | -0.9 | 0 | -0.8 | 0.11158455 | ||
| 1.1.2.1 PS.LIGHTREACTION.PHOTOSYSTEM I.LHC-I | 20 | -1 | 0 | -1 | 0 | -0.85 | 0.034731545 | ||
| 1.1.2.2 PS.LIGHTREACTION.PHOTOSYSTEM I.PSI POLYPEPTIDE SUBUNITS | 27 | -0.85 | 0 | -0.85 | 0 | -0.85 | 0.43188563 | ||
| 1.1.4 PS.LIGHTREACTION.ATP SYNTHASE | 33 | -0.55 | 0.023821156 | -0.61 | 2.5436588E-4 | -0.15 | 0.43157664 | ||
| 1.1.6 PS.LIGHTREACTION.NADH DH | 15 | -0.33 | 0.06531188 | -0.67 | 0.039107766 | -0.47 | 0.06888999 | ||
| 1.2 PS.PHOTORESPIRATION | 40 | -0.63 | 0.019164875 | -0.65 | 3.359912E-4 | -0.28 | 0.43090528 | ||
| 1.3 PS.CALVIN CYCLE | 64 | -0.83 | 0 | -0.8 | 0 | -0.75 | 0.298029 | ||
| 2.2.1 MAJOR CHO METABOLISM.DEGRADATION.SUCROSE | 47 | 0.28 | 0.069691494 | 0.3 | 0.038280528 | 0.32 | 0.8610339 | ||
| 2.2.2 MAJOR CHO METABOLISM.DEGRADATION.STARCH | 45 | -0.53 | 0.6652691 | 0.16 | 0.76280403 | 0.38 | 0.025008662 | ||
| 2.2.2.1 MAJOR CHO METABOLISM.DEGRADATION.STARCH.STARCH CLEAVAGE | 21 | 0.33 | 0.78391147 | 0.38 | 0.2677475 | 0.52 | 0.005465854 | ||
| 3 MINOR CHO METABOLISM | 106 | 0.22 | 0.51755995 | 0.25 | 0.18555059 | 0.41 | 0.039075173 | ||
| 3.2 MINOR CHO METABOLISM.TREHALOSE | 24 | 0.17 | 0.78762037 | 0.29 | 0.24573344 | 0.58 | 0.032902814 | ||
| 8.2 TCA / ORGANIC TRANSFORMATION.OTHER ORGANIC ACID TRANSFORMATIONS | 28 | 0.36 | 0.6394126 | -0.32 | 0.28416583 | -0.71 | 2.530303E-4 | ||
| 9 MITOCHONDRIAL ELECTRON TRANSPORT / ATP SYNTHESIS | 127 | 0.54 | 0.1524293 | 0.25 | 0.6206442 | -0.57 | 0.036466043 | ||
| 9.1 MITOCHONDRIAL ELECTRON TRANSPORT / ATP SYNTHESIS.NADH-DH (TYPE I) | 43 | 0.86 | 0.018366423 | 0.51 | 0.8293647 | -0.49 | 0.033190645 | ||
| 9.1.1 MITOCHONDRIAL ELECTRON TRANSPORT / ATP SYNTHESIS.NADH-DH (TYPE I).COMPLEX I | 17 | 0.71 | 0.19087838 | -1 | 1 | -0.71 | 0.009228948 | ||
| 9.1.2 MITOCHONDRIAL ELECTRON TRANSPORT / ATP SYNTHESIS.NADH-DH (TYPE I).LOCALISATION NOT CLEAR | 26 | 0.92 | 0.028250206 | 0.58 | 0.5810636 | -0.27 | 0.29654688 | ||
| 10.5.1 CELL WALL.CELL WALL PROTEINS.AGPS | 19 | -0.53 | 0.019962203 | -0.47 | 0.010098433 | -1 | 0.2958957 | ||
| 10.5.1.1 CELL WALL.CELL WALL PROTEINS.AGPS.AGP | 19 | -0.53 | 0.01650659 | -0.47 | 0.011842307 | -1 | 0.2990918 | ||
| 10.6 CELL WALL.DEGRADATION | 110 | -0.36 | 0.061796322 | -0.39 | 0.040728014 | -0.1 | 0.5480588 | ||
| 10.6.2 CELL WALL.DEGRADATION.MANNAN-XYLOSE-ARABINOSE-FUCOSE | 36 | 0.14 | 0.6336782 | -0.36 | 0.28555548 | -0.25 | 0.009733883 | ||
| 11.1.8 LIPID METABOLISM.FA SYNTHESIS AND FA ELONGATION.ACYL COA LIGASE | 18 | 0.33 | 0.11526737 | 0.44 | 0.027511483 | 0.56 | 0.13201687 | ||
| 11.2 LIPID METABOLISM.FA DESATURATION | 15 | -0.6 | 0.03918574 | -0.6 | 0.010013015 | -0.4 | 0.44790322 | ||
| 11.6 LIPID METABOLISM.LIPID TRANSFER PROTEINS ETC | 22 | 0.55 | 0.01930489 | 0.55 | 0.020412441 | 0.27 | 0.29133773 | ||
| 11.9 LIPID METABOLISM.LIPID DEGRADATION | 114 | 0.26 | 0.023167312 | 0.42 | 0.015638635 | 0.26 | 0.5750684 | ||
| 11.9.2 LIPID METABOLISM.LIPID DEGRADATION.LIPASES | 31 | 0.45 | 0.009875635 | 0.42 | 0.007641584 | 0.26 | 0.67292994 | ||
| 11.9.2.1 LIPID METABOLISM.LIPID DEGRADATION.LIPASES.TRIACYLGLYCEROL LIPASE | 29 | 0.41 | 0.010488501 | 0.41 | 0.008721731 | 0.55 | 0.8589573 | ||
| 11.9.4 LIPID METABOLISM.LIPID DEGRADATION.BETA-OXIDATION | 30 | 0.33 | 0.11166402 | 0.5 | 0.01684036 | 0.33 | 0.09372785 | ||
| 13.2 AMINO ACID METABOLISM.DEGRADATION | 57 | 0.3 | 0.011144033 | 0.39 | 0.006208702 | 0.25 | 0.0957696 | ||
| 13.2.3 AMINO ACID METABOLISM.DEGRADATION.ASPARTATE FAMILY | 18 | 0.28 | 0.3353544 | 0.33 | 0.10599876 | 0.28 | 0.037559886 | ||
| 16 SECONDARY METABOLISM | 272 | 0.35 | 0.0065947096 | 0.4 | 1.0721982E-4 | 0.29 | 0.12820297 | ||
| 16.1.4 SECONDARY METABOLISM.ISOPRENOIDS.CAROTENOIDS | 24 | -0.75 | 0.03594651 | -0.58 | 0.07759891 | 0.54 | 0.54755175 | ||
| 16.1.5 SECONDARY METABOLISM.ISOPRENOIDS.TERPENOIDS | 16 | 0.56 | 0 | 0.44 | 2.9422782E-4 | -0.19 | 0.7107832 | ||
| 16.2 SECONDARY METABOLISM.PHENYLPROPANOIDS | 72 | 0.57 | 0 | 0.46 | 0 | 0.43 | 0.07453526 | ||
| 16.2.1 SECONDARY METABOLISM.PHENYLPROPANOIDS.LIGNIN BIOSYNTHESIS | 44 | 0.55 | 0 | 0.5 | 0 | 0.59 | 0.023717409 | ||
| 16.5 SECONDARY METABOLISM.SULFUR-CONTAINING | 24 | 0.46 | 0.015002461 | 0.54 | 0.0029080515 | 0.38 | 0.44766372 | ||
| 16.5.1 SECONDARY METABOLISM.SULFUR-CONTAINING.GLUCOSINOLATES | 22 | 0.5 | 0.0108669745 | 0.59 | 0.0032684794 | 0.36 | 0.55616 | ||
| 16.5.1.1 SECONDARY METABOLISM.SULFUR-CONTAINING.GLUCOSINOLATES.SYNTHESIS | 20 | 0.5 | 0.014126717 | 0.6 | 0.0057333694 | 0.4 | 0.42419526 | ||
| 16.5.1.1.1 SECONDARY METABOLISM.SULFUR-CONTAINING.GLUCOSINOLATES.SYNTHESIS.ALIPHATIC | 20 | 0.5 | 0.017283725 | 0.6 | 0.007950532 | 0.4 | 0.4366753 | ||
| 17 HORMONE METABOLISM | 361 | 0.24 | 0.06868056 | 0.25 | 0.0223946 | 0.42 | 0.07345289 | ||
| 17.1 HORMONE METABOLISM.ABSCISIC ACID | 51 | 0.29 | 0.027644359 | 0.57 | 0.0015286502 | 0.63 | 0.005865276 | ||
| 17.1.2 HORMONE METABOLISM.ABSCISIC ACID.SIGNAL TRANSDUCTION | 20 | 0.6 | 0.06613802 | 0.55 | 0.01443613 | 0.4 | 0.04124602 | ||
| 17.3 HORMONE METABOLISM.BRASSINOSTEROID | 42 | -0.17 | 0.16637272 | 0.31 | 1 | 0.52 | 0.033234604 | ||
| 17.6 HORMONE METABOLISM.GIBBERELIN | 20 | 0.6 | 0.0094964355 | 0.55 | 0.0077047287 | -0.2 | 0.2180508 | ||
| 17.7 HORMONE METABOLISM.JASMONATE | 33 | 0.79 | 0 | 0.73 | 0 | 0.42 | 0.0728531 | ||
| 17.7.1 HORMONE METABOLISM.JASMONATE.SYNTHESIS-DEGRADATION | 24 | 0.75 | 0.008387654 | 0.75 | 0.008232542 | 0.33 | 0.5540746 | ||
| 19 TETRAPYRROLE SYNTHESIS | 70 | -0.8 | 0 | -0.73 | 0 | 0.13 | 0.9256017 | ||
| 20.1.7 STRESS.BIOTIC.PR-PROTEINS | 60 | 0.43 | 0 | 0.45 | 0 | 0.28 | 0.10711737 | ||
| 20.1.7.3 STRESS.BIOTIC.PR-PROTEINS.PR3/4/8/11 (CHITINASES AND CHITIN BINDING PROTEINS) | 16 | 0.31 | 0.010603486 | 0.5 | 1.2253695E-4 | 0.38 | 0.043014646 | ||
| 20.2.3 STRESS.ABIOTIC.DROUGHT/SALT | 36 | 0.25 | 0.058060303 | 0.31 | 0.04120248 | 0.28 | 0.3080522 | ||
| 21.2.1 REDOX.ASCORBATE AND GLUTATHIONE.ASCORBATE | 31 | 0.19 | 0.97378373 | -0.48 | 0.15357254 | -0.52 | 0.021951912 | ||
| 21.4 REDOX.GLUTAREDOXINS | 18 | -0.44 | 0.03566066 | -0.44 | 0.015854878 | -0.17 | 0.5712155 | ||
| 23.4 NUCLEOTIDE METABOLISM.PHOSPHOTRANSFER AND PYROPHOSPHATASES | 49 | 0.1 | 0.9453975 | -0.33 | 0.35428187 | -0.47 | 0.02319725 | ||
| 26.2 MISC.UDP GLUCOSYL AND GLUCORONYL TRANSFERASES | 176 | 0.3 | 0.044461574 | 0.26 | 0.019341564 | 0.32 | 0.45163676 | ||
| 26.4 MISC.BETA 1,3 GLUCAN HYDROLASES | 52 | 0.44 | 0.025961248 | 0.48 | 0.07076017 | -0.15 | 0.7332414 | ||
| 26.4.1 MISC.BETA 1,3 GLUCAN HYDROLASES.GLUCAN ENDO-1,3-BETA-GLUCOSIDASE | 44 | 0.3 | 0.028336989 | 0.48 | 0.065564066 | 0.14 | 0.7348826 | ||
| 26.8 MISC.NITRILASES, NITRILE LYASES, BERBERINE BRIDGE ENZYMES, RETICULINE OXIDASES, TROPONINE REDUCTASES | 38 | 0.39 | 0.051637497 | 0.37 | 0.038217314 | 0.24 | 0.22716403 | ||
| 26.9 MISC.GLUTATHIONE S TRANSFERASES | 40 | 0.43 | 0.03317513 | 0.43 | 0.039047193 | 0.35 | 0.20766424 | ||
| 26.10 MISC.CYTOCHROME P450 | 119 | 0.38 | 0.024246166 | 0.39 | 7.2915544E-4 | 0.39 | 0.0022542768 | ||
| 26.12 MISC.PEROXIDASES | 27 | 0.37 | 0.027615394 | 0.41 | 0.056105755 | 0.33 | 0.6902009 | ||
| 26.18 MISC.INVERTASE/PECTIN METHYLESTERASE INHIBITOR FAMILY PROTEIN | 16 | -0.56 | 0.0044458658 | -0.75 | 1.0824537E-4 | -0.56 | 0.003358444 | ||
| 27.1.2 RNA.PROCESSING.RNA HELICASE | 52 | -0.75 | 0.032197975 | -0.52 | 0.17591128 | 0.73 | 0.38564312 | ||
| 27.3.3 RNA.REGULATION OF TRANSCRIPTION.AP2/EREBP, APETALA2/ETHYLENE-RESPONSIVE ELEMENT BINDING PROTEIN FAMILY | 72 | 0.25 | 0.07309445 | 0.36 | 0.041192688 | 0.31 | 0.024880104 | ||
| 27.3.6 RNA.REGULATION OF TRANSCRIPTION.BASIC HELIX-LOOP-HELIX FAMILY (BHLH) | 119 | 0.21 | 0.642282 | 0.34 | 0.21512465 | 0.4 | 0.043818787 | ||
| 27.3.8 RNA.REGULATION OF TRANSCRIPTION.C2C2(ZN) DOF ZINC FINGER FAMILY | 32 | 0.41 | 0.14820386 | 0.38 | 0.033149853 | 0.34 | 0.06895708 | ||
| 27.3.22 RNA.REGULATION OF TRANSCRIPTION.HOMEOBOX TRANSCRIPTION FACTOR FAMILY (HB) | 60 | 0.23 | 0.110887654 | 0.33 | 0.032452077 | 0.45 | 0.058449645 | ||
| 27.3.27 RNA.REGULATION OF TRANSCRIPTION.NAC DOMAIN TRANSCRIPTION FACTOR FAMILY | 47 | 0.34 | 0.009335056 | 0.38 | 0 | 0.53 | 0.0027121562 | ||
| 27.3.32 RNA.REGULATION OF TRANSCRIPTION.WRKY DOMAIN TRANSCRIPTION FACTOR FAMILY | 53 | 0.6 | 0 | 0.66 | 0 | 0.3 | 0.7139528 | ||
| 27.3.35 RNA.REGULATION OF TRANSCRIPTION.BZIP TRANSCRIPTION FACTOR FAMILY | 107 | 0.37 | 0.015358092 | 0.46 | 0.006303817 | 0.45 | 0.096126355 | ||
| 27.3.40 RNA.REGULATION OF TRANSCRIPTION.AUX/IAA FAMILY | 27 | -0.56 | 0.1926128 | 0.26 | 0.65819466 | 0.56 | 0.007838126 | ||
| 27.3.57 RNA.REGULATION OF TRANSCRIPTION.JUMONJI FAMILY | 22 | -0.36 | 0.23499753 | 0.32 | 1 | 0.68 | 0.038073428 | ||
| 27.3.69 RNA.REGULATION OF TRANSCRIPTION.SET-DOMAIN TRANSCRIPTIONAL REGULATOR FAMILY | 40 | -0.65 | 0.032524686 | -0.28 | 1 | 0.68 | 0.0136096375 | ||
| 28.1 DNA.SYNTHESIS/CHROMATIN STRUCTURE | 346 | -0.45 | 0.0122621795 | -0.37 | 0.0011042219 | -0.24 | 0.13580005 | ||
| 28.1.1 DNA.SYNTHESIS/CHROMATIN STRUCTURE.RETROTRANSPOSON/TRANSPOSASE | 75 | 0.24 | 0.68773705 | -0.27 | 1 | -0.45 | 0.034147106 | ||
| 28.1.1.4 DNA.SYNTHESIS/CHROMATIN STRUCTURE.RETROTRANSPOSON/TRANSPOSASE.HAT-LIKE TRANSPOSASE | 63 | 0.24 | 0.78532755 | -0.27 | 0.99915564 | -0.41 | 0.045819487 | ||
| 28.1.3 DNA.SYNTHESIS/CHROMATIN STRUCTURE.HISTONE | 55 | -0.56 | 5.5980013E-4 | -0.69 | 0 | -0.67 | 0 | ||
| 28.1.3.2 DNA.SYNTHESIS/CHROMATIN STRUCTURE.HISTONE.CORE | 51 | -0.61 | 1.7269346E-4 | -0.75 | 0 | -0.73 | 0 | ||
| 28.1.3.2.3 DNA.SYNTHESIS/CHROMATIN STRUCTURE.HISTONE.CORE.H3 | 21 | -0.71 | 0.0016797087 | -0.71 | 0 | -0.81 | 1.5625001E-4 | ||
| 28.1.3.2.4 DNA.SYNTHESIS/CHROMATIN STRUCTURE.HISTONE.CORE.H4 | 16 | -0.88 | 0.020640608 | -0.88 | 1.1316561E-4 | -0.88 | 1.25E-4 | ||
| 29.2.1.1 PROTEIN.SYNTHESIS.RIBOSOMAL PROTEIN.PROKARYOTIC | 134 | -0.49 | 0 | -0.51 | 0 | -0.76 | 0 | ||
| 29.2.1.1.1 PROTEIN.SYNTHESIS.RIBOSOMAL PROTEIN.PROKARYOTIC.CHLOROPLAST | 94 | -0.7 | 0 | -0.69 | 0 | -0.74 | 1.7857144E-4 | ||
| 29.2.1.1.1.1 PROTEIN.SYNTHESIS.RIBOSOMAL PROTEIN.PROKARYOTIC.CHLOROPLAST.30S SUBUNIT | 27 | -0.74 | 0 | -0.78 | 0 | -0.67 | 0.0014762966 | ||
| 29.2.1.1.1.2 PROTEIN.SYNTHESIS.RIBOSOMAL PROTEIN.PROKARYOTIC.CHLOROPLAST.50S SUBUNIT | 66 | -0.68 | 0 | -0.65 | 0 | -0.79 | 1.3888889E-4 | ||
| 29.2.1.1.3 PROTEIN.SYNTHESIS.RIBOSOMAL PROTEIN.PROKARYOTIC.UNKNOWN ORGANELLAR | 23 | -0.09 | 0.92883414 | -0.65 | 0.104387775 | -0.74 | 0.008506156 | ||
| 29.2.1.1.3.2 PROTEIN.SYNTHESIS.RIBOSOMAL PROTEIN.PROKARYOTIC.UNKNOWN ORGANELLAR.50S SUBUNIT | 16 | 1 | 0.9488194 | -0.69 | 0.29636392 | -0.88 | 0.022044923 | ||
| 29.2.1.2 PROTEIN.SYNTHESIS.RIBOSOMAL PROTEIN.EUKARYOTIC | 359 | -0.92 | 0.9973535 | -0.75 | 0 | -0.8 | 0 | ||
| 29.2.1.2.1 PROTEIN.SYNTHESIS.RIBOSOMAL PROTEIN.EUKARYOTIC.40S SUBUNIT | 135 | -0.38 | 1 | -0.73 | 0 | -0.81 | 0 | ||
| 29.2.1.2.2 PROTEIN.SYNTHESIS.RIBOSOMAL PROTEIN.EUKARYOTIC.60S SUBUNIT | 223 | 0.98 | 0.9986812 | -0.75 | 0 | -0.79 | 0 | ||
| 29.2.2 PROTEIN.SYNTHESIS.RIBOSOME BIOGENESIS | 187 | -0.48 | 0.10582101 | -0.45 | 0.02159551 | -0.24 | 0.5650544 | ||
| 29.2.2.3 PROTEIN.SYNTHESIS.RIBOSOME BIOGENESIS.PRE-RRNA PROCESSING AND MODIFICATIONS | 150 | -0.55 | 0.08186086 | -0.5 | 0.006685409 | -0.26 | 0.2917789 | ||
| 29.2.2.3.3 PROTEIN.SYNTHESIS.RIBOSOME BIOGENESIS.PRE-RRNA PROCESSING AND MODIFICATIONS.METHYLOTRANSFERASES | 99 | -0.46 | 0.105065525 | -0.48 | 0.011422412 | -0.2 | 0.16167387 | ||
| 29.3.2 PROTEIN.TARGETING.MITOCHONDRIA | 30 | 0.3 | 0.53077406 | 0.2 | 1 | -0.47 | 0.034118805 | ||
| 29.3.3 PROTEIN.TARGETING.CHLOROPLAST | 38 | -0.71 | 0.050828613 | -0.63 | 0.010055174 | -0.32 | 0.8852134 | ||
| 29.3.4 PROTEIN.TARGETING.SECRETORY PATHWAY | 152 | 0.51 | 0.03965825 | 0.45 | 0.17059357 | -0.24 | 0.5672916 | ||
| 29.4.1.57 PROTEIN.POSTRANSLATIONAL MODIFICATION.KINASE.RECEPTOR LIKE CYTOPLASMATIC KINASE VII | 48 | 0.31 | 1.3384188E-4 | 0.38 | 0.009904807 | -0.17 | 0.35126272 | ||
| 29.5.2 PROTEIN.DEGRADATION.AUTOPHAGY | 22 | 0.64 | 0.11612758 | 0.41 | 0.040441904 | 0.36 | 0.11818822 | ||
| 29.5.9 PROTEIN.DEGRADATION.AAA TYPE | 25 | 0.28 | 0.029034935 | 0.32 | 0.057617012 | 0.12 | 0.9502508 | ||
| 29.5.11.3 PROTEIN.DEGRADATION.UBIQUITIN.E2 | 53 | 0.72 | 0.00812613 | 0.28 | 0.21067885 | -0.53 | 0.033184744 | ||
| 29.5.11.4.1 PROTEIN.DEGRADATION.UBIQUITIN.E3.HECT | 15 | 1 | 0.9764751 | 0.73 | 0.05364892 | 0.87 | 0.008390166 | ||
| 29.5.11.4.5 PROTEIN.DEGRADATION.UBIQUITIN.E3.BTB/POZ CULLIN3 | 23 | 0.26 | 0.18370198 | 0.48 | 0.046761144 | 0.48 | 0.46090564 | ||
| 29.5.11.20 PROTEIN.DEGRADATION.UBIQUITIN.PROTEASOM | 78 | 0.79 | 0.013309115 | 0.6 | 0.6270864 | -0.5 | 0.06610675 | ||
| 30.1 SIGNALLING.IN SUGAR AND NUTRIENT PHYSIOLOGY | 41 | 0.39 | 0.03297991 | 0.46 | 0.027456196 | 0.32 | 0.18390733 | ||
| 30.1.1 SIGNALLING.IN SUGAR AND NUTRIENT PHYSIOLOGY.MISC | 39 | 0.41 | 0.024945958 | 0.49 | 0.019286465 | 0.33 | 0.16357456 | ||
| 30.2.3 SIGNALLING.RECEPTOR KINASES.LEUCINE RICH REPEAT III | 45 | -0.6 | 0 | -0.53 | 1.18554446E-4 | 0.44 | 0.28105342 | ||
| 30.2.6 SIGNALLING.RECEPTOR KINASES.LEUCINE RICH REPEAT VI | 32 | -0.5 | 0.36622906 | -0.44 | 0.029873006 | -0.47 | 0.13298897 | ||
| 30.2.19 SIGNALLING.RECEPTOR KINASES.LEGUME-LECTIN | 25 | 0.68 | 0.014431678 | 0.68 | 5.311018E-4 | 0.52 | 0.30005696 | ||
| 30.2.24 SIGNALLING.RECEPTOR KINASES.S-LOCUS GLYCOPROTEIN LIKE | 26 | 0.42 | 0.03720701 | 0.42 | 0.10619319 | 0.54 | 0.34974986 | ||
| 30.3 SIGNALLING.CALCIUM | 238 | 0.26 | 0.02944596 | 0.33 | 0.16819595 | -0.16 | 0.111446895 | ||
| 30.4.1 SIGNALLING.PHOSPHINOSITIDES.PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE | 22 | -0.45 | 0.27307945 | 0.59 | 0.65782493 | 0.82 | 0.026724309 | ||
| 30.11 SIGNALLING.LIGHT | 137 | -0.26 | 0.66970533 | 0.24 | 0.4591947 | 0.47 | 0.024941403 | ||
| 31.3.1 CELL.CYCLE.PEPTIDYLPROLYL ISOMERASE | 38 | 0.53 | 0.99491733 | -0.34 | 0.733659 | -0.45 | 0.009380837 | ||
| 33.1 DEVELOPMENT.STORAGE PROTEINS | 16 | 0.5 | 0.034799278 | 0.5 | 0.0039873696 | 0.63 | 0.31968057 | ||
| 33.2 DEVELOPMENT.LATE EMBRYOGENESIS ABUNDANT | 20 | 0.35 | 0.7179628 | -0.25 | 0.9947229 | -0.25 | 0.024278346 | ||
| 34.2 TRANSPORT.SUGARS | 53 | 0.3 | 0.10484578 | 0.32 | 0.039852962 | 0.32 | 0.19666202 | ||
| 34.3 TRANSPORT.AMINO ACIDS | 57 | 0.35 | 0.23792817 | 0.42 | 0.0090678055 | 0.32 | 0.006438417 | ||
| 34.4 TRANSPORT.NITRATE | 15 | 0.4 | 0.1131374 | 0.53 | 0.009838893 | 0.47 | 0.008825157 | ||
| 34.12 TRANSPORT.METAL | 82 | 0.23 | 0.066981815 | 0.48 | 0.019830966 | 0.41 | 0.38803294 | ||
| 34.13 TRANSPORT.PEPTIDES AND OLIGOPEPTIDES | 46 | 0.37 | 0.01644566 | 0.41 | 0.0014277414 | 0.43 | 0.094972834 | ||
| 34.16 TRANSPORT.ABC TRANSPORTERS AND MULTIDRUG RESISTANCE SYSTEMS | 98 | 0.16 | 0.34510082 | 0.23 | 0.10757597 | 0.4 | 0.03920121 | ||
| 34.19.1 TRANSPORT.MAJOR INTRINSIC PROTEINS.PIP | 22 | 0.55 | 0.22007534 | 0.45 | 0.0028360193 | 0.64 | 0.007071973 | ||
| 34.22 TRANSPORT.CYCLIC NUCLEOTIDE OR CALCIUM REGULATED CHANNELS | 19 | 0.42 | 0.009147273 | 0.32 | 0.007604857 | 0.26 | 0.09648176 | ||
| 35.1.5 NOT ASSIGNED.NO ONTOLOGY.PENTATRICOPEPTIDE (PPR) REPEAT-CONTAINING PROTEIN | 344 | -0.62 | 0 | -0.41 | 0.0017006496 | 0.38 | 0.17218587 | ||
| 35.1.27 NOT ASSIGNED.NO ONTOLOGY.TETRATRICOPEPTIDE REPEAT (TPR) | 177 | -0.39 | 0.001440207 | -0.32 | 0.048738062 | 0.32 | 0.6724545 | ||
| 35.1.40 NOT ASSIGNED.NO ONTOLOGY.GLYCINE RICH PROTEINS | 17 | 0.53 | 0.086896986 | 0.59 | 0.03836053 | 0.47 | 0.17253765 |
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| ###GSEA results for SxP; counts were normalized with edgeR; permutation by gene_set; p-value<0.01; FDR<0.05 | |||||||||
| ###The first colum for each contrast gives the tags statistics: The percentage of gene hits before (for positive ES) or after (for negative ES) the peak in the running enrichment score. This gives an indication of the percentage of genes contributing to the enrichment score | |||||||||
| ###The second column gives FDR q-values. Since the permutation by gene_set was used, only gene sets with FDR<0.05 should be considered. | |||||||||
| high1-wt | high2-wt | low1-wt | low2-wt | ||||||
| NAME | SIZE | h1-w_tag | h1-w_FDR | h2-w_tag | h2-w_FDR | l1-w_tag | l1-wt_FDR | l2-wt_tag | l2-wt_FDR |
| 1 PS | 327 | -0.71 | 0 | -0.72 | 0 | -0.54 | 0.22886541 | -0.63 | 0.10133779 |
| 1.1 PS.LIGHTREACTION | 221 | -0.67 | 0 | -0.69 | 0 | -0.53 | 0.20674433 | -0.65 | 0.16354212 |
| 1.1.1 PS.LIGHTREACTION.PHOTOSYSTEM II | 92 | -0.79 | 0 | -0.8 | 0 | -0.53 | 0.5398772 | 0.05 | 0.4531852 |
| 1.1.1.1 PS.LIGHTREACTION.PHOTOSYSTEM II.LHC-II | 38 | -0.89 | 0 | -0.92 | 0 | 0.11 | 0.21668893 | 0.08 | 0.22491582 |
| 1.1.1.2 PS.LIGHTREACTION.PHOTOSYSTEM II.PSII POLYPEPTIDE SUBUNITS | 53 | -0.77 | 0 | -0.72 | 0 | -0.7 | 0.077949345 | -0.72 | 0.3739436 |
| 1.1.2 PS.LIGHTREACTION.PHOTOSYSTEM I | 49 | -0.88 | 0 | -0.88 | 0 | -0.63 | 0.57967484 | -0.84 | 0.08912777 |
| 1.1.2.1 PS.LIGHTREACTION.PHOTOSYSTEM I.LHC-I | 20 | -1 | 0 | -1 | 0 | -1 | 0.63424 | -0.85 | 0.043710813 |
| 1.1.2.2 PS.LIGHTREACTION.PHOTOSYSTEM I.PSI POLYPEPTIDE SUBUNITS | 27 | -0.85 | 0 | -0.85 | 0 | -0.74 | 0.49830413 | -0.85 | 0.44311962 |
| 1.1.4 PS.LIGHTREACTION.ATP SYNTHASE | 33 | -0.55 | 1.7376758E-4 | -0.61 | 0.0029318286 | -0.09 | 0.62246823 | -0.15 | 0.4389502 |
| 1.1.6 PS.LIGHTREACTION.NADH DH | 15 | -0.47 | 0.021872235 | -0.4 | 0.021785889 | -0.33 | 0.1877887 | -0.33 | 0.07688964 |
| 1.2 PS.PHOTORESPIRATION | 40 | -0.58 | 0.0046308814 | -0.58 | 1.1052755E-4 | -0.68 | 0.5735644 | -0.5 | 0.4475646 |
| 1.3 PS.CALVIN CYCLE | 64 | -0.81 | 0 | -0.8 | 0 | -0.52 | 0.94917697 | -0.73 | 0.16696365 |
| 2.2 MAJOR CHO METABOLISM.DEGRADATION | 92 | 0.2 | 0.088641524 | 0.24 | 0.16607907 | 0.26 | 0.5888069 | 0.28 | 0.034705065 |
| 2.2.1 MAJOR CHO METABOLISM.DEGRADATION.SUCROSE | 47 | 0.34 | 0.04986095 | 0.3 | 0.06379577 | -0.21 | 0.38008517 | 0.28 | 0.34415329 |
| 2.2.2 MAJOR CHO METABOLISM.DEGRADATION.STARCH | 45 | 0.16 | 0.4955098 | 0.22 | 0.8496986 | 0.31 | 0.12989631 | 0.33 | 0.0071875514 |
| 2.2.2.1 MAJOR CHO METABOLISM.DEGRADATION.STARCH.STARCH CLEAVAGE | 21 | 0.24 | 0.25740162 | 0.43 | 0.14768204 | 0.38 | 0.13835807 | 0.43 | 0.009970122 |
| 3 MINOR CHO METABOLISM | 106 | 0.25 | 0.14923313 | 0.23 | 0.28202128 | 0.34 | 0.30227384 | 0.41 | 0.006037227 |
| 3.2 MINOR CHO METABOLISM.TREHALOSE | 24 | 0.21 | 0.5065927 | 0.29 | 0.08147449 | 0.5 | 0.54240316 | 0.63 | 0.002348945 |
| 5 FERMENTATION | 16 | 0.38 | 0.10815595 | 0.5 | 0.036756814 | 0.13 | 1 | 0.38 | 0.7794181 |
| 8 TCA / ORGANIC TRANSFORMATION | 102 | 0.25 | 0.9787616 | -0.22 | 0.6692487 | -0.41 | 0.21664628 | -0.42 | 0.045424 |
| 8.2 TCA / ORGANIC TRANSFORMATION.OTHER ORGANIC ACID TRANSFORMATIONS | 28 | -0.18 | 0.5144735 | -0.32 | 0.071223766 | -0.75 | 0.028531684 | -0.64 | 7.3265977E-4 |
| 9.1 MITOCHONDRIAL ELECTRON TRANSPORT / ATP SYNTHESIS.NADH-DH (TYPE I) | 43 | 0.81 | 0.12292758 | -1 | 0.99612164 | -0.6 | 0.13131009 | -0.6 | 0.03593558 |
| 10.5.1 CELL WALL.CELL WALL PROTEINS.AGPS | 19 | -0.79 | 3.1511212E-4 | -0.26 | 0.13879487 | 0.58 | 0.45139873 | -0.79 | 0.061465506 |
| 10.5.1.1 CELL WALL.CELL WALL PROTEINS.AGPS.AGP | 19 | -0.79 | 6.359397E-4 | -0.26 | 0.13463786 | 0.58 | 0.47622532 | -0.79 | 0.058826298 |
| 10.6 CELL WALL.DEGRADATION | 110 | -0.41 | 0.048843674 | -0.28 | 0.07131803 | 0.32 | 0.55164856 | -0.14 | 0.15728869 |
| 10.6.2 CELL WALL.DEGRADATION.MANNAN-XYLOSE-ARABINOSE-FUCOSE | 36 | -0.33 | 0.52835923 | -0.28 | 0.52651936 | -0.17 | 0.18970048 | -0.28 | 2.8538206E-4 |
| 11.1.8 LIPID METABOLISM.FA SYNTHESIS AND FA ELONGATION.ACYL COA LIGASE | 18 | 0.56 | 0.024085753 | 0.44 | 0.038308956 | 0.22 | 0.52313703 | 0.33 | 0.08543265 |
| 11.2 LIPID METABOLISM.FA DESATURATION | 15 | -0.53 | 0.014420427 | -0.4 | 0.007801382 | -1 | 0.97078246 | -0.6 | 0.38414523 |
| 11.6 LIPID METABOLISM.LIPID TRANSFER PROTEINS ETC | 22 | 0.5 | 0.014772623 | 0.55 | 0.09868902 | 0.09 | 0.8324676 | 0.41 | 0.120417275 |
| 11.9 LIPID METABOLISM.LIPID DEGRADATION | 114 | 0.39 | 0.050937954 | 0.33 | 0.01249595 | -0.21 | 0.20141217 | 0.35 | 0.08791565 |
| 11.9.2 LIPID METABOLISM.LIPID DEGRADATION.LIPASES | 31 | 0.35 | 0.018994607 | 0.42 | 0.0010181912 | -0.23 | 0.066801 | 0.58 | 0.088378474 |
| 11.9.2.1 LIPID METABOLISM.LIPID DEGRADATION.LIPASES.TRIACYLGLYCEROL LIPASE | 29 | 0.34 | 0.01901275 | 0.41 | 0.0015510775 | -0.24 | 0.06419616 | 0.59 | 0.1083041 |
| 11.9.4 LIPID METABOLISM.LIPID DEGRADATION.BETA-OXIDATION | 30 | 0.6 | 0.0091033615 | 0.5 | 0.0431595 | 0.17 | 0.7786751 | 0.33 | 0.0068781385 |
| 13.2 AMINO ACID METABOLISM.DEGRADATION | 57 | 0.32 | 0.0090007 | 0.26 | 0.0030272903 | 0.19 | 0.8136744 | 0.23 | 0.008359415 |
| 13.2.3 AMINO ACID METABOLISM.DEGRADATION.ASPARTATE FAMILY | 18 | 0.28 | 0.14234638 | 0.28 | 0.07437859 | 0.33 | 0.45121333 | 0.28 | 0.007291763 |
| 16 SECONDARY METABOLISM | 272 | 0.37 | 5.896551E-4 | 0.35 | 1.2190477E-4 | -0.22 | 0.3280745 | 0.37 | 1.527778E-4 |
| 16.1 SECONDARY METABOLISM.ISOPRENOIDS | 97 | 0.26 | 0.1393193 | 0.29 | 0.03261879 | -0.14 | 0.08831047 | 0.28 | 0.16245332 |
| 16.1.5 SECONDARY METABOLISM.ISOPRENOIDS.TERPENOIDS | 16 | 0.44 | 2.219731E-4 | 0.5 | 0 | -0.25 | 0.06299355 | 0.5 | 0.111096025 |
| 16.2 SECONDARY METABOLISM.PHENYLPROPANOIDS | 72 | 0.57 | 0 | 0.5 | 0 | 0.14 | 0.772443 | 0.56 | 0 |
| 16.2.1 SECONDARY METABOLISM.PHENYLPROPANOIDS.LIGNIN BIOSYNTHESIS | 44 | 0.57 | 1.7757848E-4 | 0.5 | 0 | 0.2 | 0.379277 | 0.64 | 0 |
| 16.5 SECONDARY METABOLISM.SULFUR-CONTAINING | 24 | 0.5 | 0.009852733 | 0.54 | 0.00972129 | 0.29 | 0.9662423 | 0.5 | 0.28396988 |
| 16.5.1 SECONDARY METABOLISM.SULFUR-CONTAINING.GLUCOSINOLATES | 22 | 0.55 | 0.013217016 | 0.59 | 0.0040456858 | 0.27 | 0.99461555 | 0.5 | 0.3434796 |
| 16.5.1.1 SECONDARY METABOLISM.SULFUR-CONTAINING.GLUCOSINOLATES.SYNTHESIS | 20 | 0.55 | 0.013542046 | 0.6 | 0.0048465393 | 0.3 | 0.95357805 | 0.55 | 0.2722648 |
| 16.5.1.1.1 SECONDARY METABOLISM.SULFUR-CONTAINING.GLUCOSINOLATES.SYNTHESIS.ALIPHATIC | 20 | 0.55 | 0.01936325 | 0.6 | 0.0045521064 | 0.3 | 0.96475065 | 0.55 | 0.24820788 |
| 16.8 SECONDARY METABOLISM.FLAVONOIDS | 45 | 0.53 | 0.06859261 | 0.27 | 0.031335175 | -0.29 | 0.45041254 | 0.49 | 0.058552884 |
| 17 HORMONE METABOLISM | 361 | 0.23 | 0.032183178 | 0.24 | 0.02480053 | 0.27 | 0.4218649 | 0.39 | 0.027226612 |
| 17.1 HORMONE METABOLISM.ABSCISIC ACID | 51 | 0.47 | 4.3905247E-4 | 0.53 | 0.006546753 | 0.37 | 0.08544952 | 0.61 | 1.8333334E-4 |
| 17.1.2 HORMONE METABOLISM.ABSCISIC ACID.SIGNAL TRANSDUCTION | 20 | 0.6 | 0.0099755395 | 0.65 | 0.021173703 | 0.35 | 0.11238225 | 0.7 | 0.0068289484 |
| 17.4 HORMONE METABOLISM.CYTOKININ | 18 | 0.11 | 1 | -0.11 | 0.9951911 | 0.56 | 0.039267104 | -0.33 | 0.6703844 |
| 17.6 HORMONE METABOLISM.GIBBERELIN | 20 | 0.6 | 0.0059445524 | 0.5 | 0.05938467 | -0.35 | 0.19577864 | -0.2 | 0.37051365 |
| 17.7 HORMONE METABOLISM.JASMONATE | 33 | 0.79 | 0.0011733698 | 0.64 | 1.0666667E-4 | -0.27 | 0.3976645 | 0.73 | 0.011227489 |
| 17.7.1 HORMONE METABOLISM.JASMONATE.SYNTHESIS-DEGRADATION | 24 | 0.79 | 0.024215229 | 0.88 | 0.0041474076 | -0.29 | 0.17633013 | 0.75 | 0.08177987 |
| 19 TETRAPYRROLE SYNTHESIS | 70 | -0.7 | 0 | -0.67 | 0 | 0.13 | 0.3193062 | -0.61 | 0.09954431 |
| 20.1.2.2 STRESS.BIOTIC.RECEPTORS.TIR-NBS-LRR | 25 | 0.44 | 0.21811482 | 0.68 | 0.100975364 | 0.28 | 0.3543182 | 0.6 | 0.007248987 |
| 20.1.7 STRESS.BIOTIC.PR-PROTEINS | 60 | 0.52 | 0 | 0.37 | 0 | -0.2 | 0.24873833 | 0.3 | 0.016726736 |
| 20.1.7.3 STRESS.BIOTIC.PR-PROTEINS.PR3/4/8/11 (CHITINASES AND CHITIN BINDING PROTEINS) | 16 | 0.44 | 0.001656476 | 0.5 | 5.233576E-4 | 0.25 | 0.21417937 | 0.44 | 0.0071703875 |
| 21.2.1 REDOX.ASCORBATE AND GLUTATHIONE.ASCORBATE | 31 | -0.35 | 0.48396775 | -0.55 | 0.043349415 | -0.65 | 0.057773907 | -0.65 | 0.115120165 |
| 21.4 REDOX.GLUTAREDOXINS | 18 | -0.44 | 0.04056684 | -0.44 | 0.014765607 | -0.22 | 0.25382268 | -0.22 | 0.43634123 |
| 23.1 NUCLEOTIDE METABOLISM.SYNTHESIS | 38 | -0.68 | 0.1661373 | -0.68 | 0.07461778 | 0.39 | 0.9398955 | -0.58 | 0.044381414 |
| 23.4 NUCLEOTIDE METABOLISM.PHOSPHOTRANSFER AND PYROPHOSPHATASES | 49 | -0.37 | 0.77271926 | -0.29 | 0.31097904 | -0.45 | 0.14887618 | -0.49 | 0.044337805 |
| 26.2 MISC.UDP GLUCOSYL AND GLUCORONYL TRANSFERASES | 176 | 0.27 | 0.06283478 | 0.35 | 0.019109935 | 0.28 | 0.9648087 | 0.21 | 0.08497241 |
| 26.3 MISC.GLUCO-, GALACTO- AND MANNOSIDASES | 130 | 0.21 | 0.19777207 | 0.18 | 0.22841515 | 0.3 | 0.4435844 | 0.35 | 0.043691225 |
| 26.4 MISC.BETA 1,3 GLUCAN HYDROLASES | 52 | 0.38 | 0.1991943 | 0.44 | 0.014646097 | -0.15 | 0.7988274 | 0.15 | 0.5824349 |
| 26.4.1 MISC.BETA 1,3 GLUCAN HYDROLASES.GLUCAN ENDO-1,3-BETA-GLUCOSIDASE | 44 | 0.43 | 0.2110302 | 0.45 | 0.008232738 | 0.3 | 0.94121635 | 0.16 | 0.38830838 |
| 26.8 MISC.NITRILASES, NITRILE LYASES, BERBERINE BRIDGE ENZYMES, RETICULINE OXIDASES, TROPONINE REDUCTASES | 38 | 0.32 | 0.04333527 | 0.34 | 0.0964908 | -0.08 | 0.38380766 | 0.29 | 0.18407887 |
| 26.9 MISC.GLUTATHIONE S TRANSFERASES | 40 | 0.45 | 0.027506005 | 0.33 | 0.055029824 | -0.23 | 0.40119052 | 0.43 | 0.016198862 |
| 26.10 MISC.CYTOCHROME P450 | 119 | 0.4 | 0.0018070647 | 0.34 | 7.1709696E-4 | 0.3 | 0.13539442 | 0.38 | 0 |
| 26.18 MISC.INVERTASE/PECTIN METHYLESTERASE INHIBITOR FAMILY PROTEIN | 16 | -0.75 | 1.8204222E-4 | -0.5 | 2.7324262E-4 | -0.63 | 0.1783952 | -0.63 | 7.752404E-5 |
| 27.3.3 RNA.REGULATION OF TRANSCRIPTION.AP2/EREBP, APETALA2/ETHYLENE-RESPONSIVE ELEMENT BINDING PROTEIN FAMILY | 72 | 0.4 | 0.07410493 | 0.24 | 0.0147968475 | 0.26 | 0.29266995 | 0.36 | 0.007812603 |
| 27.3.6 RNA.REGULATION OF TRANSCRIPTION.BASIC HELIX-LOOP-HELIX FAMILY (BHLH) | 119 | 0.3 | 0.34142444 | 0.38 | 0.13710296 | 0.41 | 0.29029208 | 0.48 | 0.034543637 |
| 27.3.8 RNA.REGULATION OF TRANSCRIPTION.C2C2(ZN) DOF ZINC FINGER FAMILY | 32 | 0.53 | 0.008766378 | 0.41 | 0.037678193 | 0.38 | 0.29621294 | 0.28 | 0.07922037 |
| 27.3.12 RNA.REGULATION OF TRANSCRIPTION.C3H ZINC FINGER FAMILY | 34 | 0.26 | 0.02415784 | 0.24 | 0.10939952 | 0.32 | 0.0906931 | 0.18 | 0.16765939 |
| 27.3.22 RNA.REGULATION OF TRANSCRIPTION.HOMEOBOX TRANSCRIPTION FACTOR FAMILY (HB) | 60 | 0.23 | 0.11062129 | 0.3 | 0.006888031 | 0.27 | 0.19522601 | 0.5 | 0.025534881 |
| 27.3.25 RNA.REGULATION OF TRANSCRIPTION.MYB DOMAIN TRANSCRIPTION FACTOR FAMILY | 91 | 0.27 | 0.16131689 | 0.33 | 0.099592626 | -0.26 | 0.5789431 | 0.48 | 0.04124036 |
| 27.3.27 RNA.REGULATION OF TRANSCRIPTION.NAC DOMAIN TRANSCRIPTION FACTOR FAMILY | 47 | 0.4 | 3.7605996E-4 | 0.36 | 0 | 0.38 | 0.3203006 | 0.62 | 0 |
| 27.3.32 RNA.REGULATION OF TRANSCRIPTION.WRKY DOMAIN TRANSCRIPTION FACTOR FAMILY | 53 | 0.55 | 0 | 0.58 | 0 | -0.25 | 0.18964848 | 0.4 | 0.09632791 |
| 27.3.35 RNA.REGULATION OF TRANSCRIPTION.BZIP TRANSCRIPTION FACTOR FAMILY | 107 | 0.5 | 0.0046387245 | 0.46 | 0.003394396 | 0.36 | 0.58235383 | 0.44 | 0.018075787 |
| 27.3.40 RNA.REGULATION OF TRANSCRIPTION.AUX/IAA FAMILY | 27 | -0.19 | 0.64965236 | 0.19 | 0.96826917 | 0.56 | 0.020862512 | 0.63 | 0.011766956 |
| 27.3.63 RNA.REGULATION OF TRANSCRIPTION.PHD FINGER TRANSCRIPTION FACTOR | 32 | -0.34 | 0.99825853 | 0.59 | 0.43449914 | 0.59 | 0.07137724 | 0.72 | 0.04674485 |
| 27.3.69 RNA.REGULATION OF TRANSCRIPTION.SET-DOMAIN TRANSCRIPTIONAL REGULATOR FAMILY | 40 | -0.4 | 0.33784863 | -0.15 | 1 | 0.83 | 0 | 0.55 | 0.4620402 |
| 28.1 DNA.SYNTHESIS/CHROMATIN STRUCTURE | 346 | -0.36 | 0.001019109 | -0.3 | 0.002071807 | 0.28 | 0.099563226 | -0.36 | 0 |
| 28.1.1.4 DNA.SYNTHESIS/CHROMATIN STRUCTURE.RETROTRANSPOSON/TRANSPOSASE.HAT-LIKE TRANSPOSASE | 63 | -0.25 | 0.99412966 | -0.27 | 1 | -0.48 | 0.17942931 | -0.37 | 0.048842132 |
| 28.1.3 DNA.SYNTHESIS/CHROMATIN STRUCTURE.HISTONE | 55 | -0.53 | 0 | -0.65 | 0 | 0.98 | 1 | -0.65 | 0 |
| 28.1.3.2 DNA.SYNTHESIS/CHROMATIN STRUCTURE.HISTONE.CORE | 51 | -0.57 | 0 | -0.71 | 0 | 0.35 | 1 | -0.71 | 0 |
| 28.1.3.2.3 DNA.SYNTHESIS/CHROMATIN STRUCTURE.HISTONE.CORE.H3 | 21 | -0.71 | 0 | -0.76 | 0 | 0.38 | 0.9999268 | -0.76 | 0 |
| 28.1.3.2.4 DNA.SYNTHESIS/CHROMATIN STRUCTURE.HISTONE.CORE.H4 | 16 | -0.94 | 0.0019710772 | -0.88 | 5.846299E-5 | 0.5 | 0.93810785 | -0.88 | 0 |
| 29.1 PROTEIN.AA ACTIVATION | 80 | -0.54 | 0.050278563 | -0.41 | 0.060346577 | 0.13 | 0.9521383 | -0.59 | 0.045210283 |
| 29.2.1.1 PROTEIN.SYNTHESIS.RIBOSOMAL PROTEIN.PROKARYOTIC | 134 | -0.51 | 0 | -0.57 | 0 | -0.63 | 0.02541579 | -0.77 | 0 |
| 29.2.1.1.1 PROTEIN.SYNTHESIS.RIBOSOMAL PROTEIN.PROKARYOTIC.CHLOROPLAST | 94 | -0.69 | 0 | -0.69 | 0 | -0.66 | 0.050373886 | -0.78 | 0 |
| 29.2.1.1.1.1 PROTEIN.SYNTHESIS.RIBOSOMAL PROTEIN.PROKARYOTIC.CHLOROPLAST.30S SUBUNIT | 27 | -0.78 | 0 | -0.78 | 0 | -0.56 | 0.074750826 | -0.74 | 0 |
| 29.2.1.1.1.2 PROTEIN.SYNTHESIS.RIBOSOMAL PROTEIN.PROKARYOTIC.CHLOROPLAST.50S SUBUNIT | 66 | -0.65 | 0 | -0.65 | 0 | -0.68 | 0.063561395 | -0.8 | 0 |
| 29.2.1.1.3 PROTEIN.SYNTHESIS.RIBOSOMAL PROTEIN.PROKARYOTIC.UNKNOWN ORGANELLAR | 23 | -0.7 | 0.67815953 | -0.65 | 0.05259525 | -0.65 | 0.20352784 | -0.7 | 0.00618697 |
| 29.2.1.1.3.2 PROTEIN.SYNTHESIS.RIBOSOMAL PROTEIN.PROKARYOTIC.UNKNOWN ORGANELLAR.50S SUBUNIT | 16 | -0.75 | 0.9496246 | -0.81 | 0.14729407 | -0.81 | 0.14722912 | -0.88 | 0.009673826 |
| 29.2.1.2 PROTEIN.SYNTHESIS.RIBOSOMAL PROTEIN.EUKARYOTIC | 359 | -0.7 | 0 | -0.82 | 0 | -0.46 | 0.06388026 | -0.88 | 0 |
| 29.2.1.2.1 PROTEIN.SYNTHESIS.RIBOSOMAL PROTEIN.EUKARYOTIC.40S SUBUNIT | 135 | -0.71 | 1.6621246E-4 | -0.78 | 0 | -0.53 | 0.19311222 | -0.85 | 0 |
| 29.2.1.2.2 PROTEIN.SYNTHESIS.RIBOSOMAL PROTEIN.EUKARYOTIC.60S SUBUNIT | 223 | -0.74 | 0 | -0.85 | 0 | -0.45 | 0.07201602 | -0.88 | 0 |
| 29.2.2 PROTEIN.SYNTHESIS.RIBOSOME BIOGENESIS | 187 | -0.49 | 0.018829055 | -0.48 | 0.04404152 | 0.29 | 0.96363294 | -0.37 | 0.1088703 |
| 29.2.2.3 PROTEIN.SYNTHESIS.RIBOSOME BIOGENESIS.PRE-RRNA PROCESSING AND MODIFICATIONS | 150 | -0.47 | 0.0039060272 | -0.49 | 0.03949409 | -0.13 | 0.9790902 | -0.39 | 0.06968038 |
| 29.2.2.3.3 PROTEIN.SYNTHESIS.RIBOSOME BIOGENESIS.PRE-RRNA PROCESSING AND MODIFICATIONS.METHYLOTRANSFERASES | 99 | -0.51 | 0.0073951357 | -0.47 | 0.060399868 | -0.16 | 0.53108805 | -0.27 | 0.25949928 |
| 29.3.2 PROTEIN.TARGETING.MITOCHONDRIA | 30 | 0.37 | 1 | -1 | 1 | -0.37 | 0.9526236 | -0.73 | 0.00844048 |
| 29.3.3 PROTEIN.TARGETING.CHLOROPLAST | 38 | -0.68 | 0.049743097 | -0.63 | 0.005072763 | 0.16 | 0.6830795 | -0.47 | 0.23829395 |
| 29.4.1.57 PROTEIN.POSTRANSLATIONAL MODIFICATION.KINASE.RECEPTOR LIKE CYTOPLASMATIC KINASE VII | 48 | 0.42 | 0.014405927 | 0.4 | 0.014655115 | -0.33 | 0.06666437 | 0.21 | 0.94196856 |
| 29.5.2 PROTEIN.DEGRADATION.AUTOPHAGY | 22 | 0.59 | 0.018514566 | 0.45 | 0.023536652 | 0.36 | 0.8929801 | 0.55 | 0.0029523498 |
| 29.5.3 PROTEIN.DEGRADATION.CYSTEINE PROTEASE | 48 | 0.48 | 0.020175852 | 0.33 | 0.17012058 | -0.17 | 0.61099964 | 0.35 | 0.09863737 |
| 29.5.9 PROTEIN.DEGRADATION.AAA TYPE | 25 | 0.24 | 0.06830216 | 0.28 | 0.032145746 | -0.2 | 0.5752229 | 0.04 | 0.993707 |
| 29.5.11.3 PROTEIN.DEGRADATION.UBIQUITIN.E2 | 53 | 0.66 | 0.06285515 | 0.17 | 0.8483536 | -0.66 | 0.029674966 | -0.43 | 0.36686432 |
| 29.5.11.4.1 PROTEIN.DEGRADATION.UBIQUITIN.E3.HECT | 15 | 0.47 | 0.1762318 | 0.93 | 0.110698804 | 0.8 | 0.03046303 | 0.93 | 0.0022835338 |
| 29.5.11.4.3 PROTEIN.DEGRADATION.UBIQUITIN.E3.SCF | 240 | 0.34 | 0.45180616 | 0.3 | 0.8539541 | 0.37 | 0.59961385 | 0.57 | 0.0069584246 |
| 29.5.11.4.3.2 PROTEIN.DEGRADATION.UBIQUITIN.E3.SCF.FBOX | 219 | 0.36 | 0.44086018 | 0.19 | 0.83293647 | 0.39 | 0.5420592 | 0.56 | 0.0027041303 |
| 29.5.11.4.5 PROTEIN.DEGRADATION.UBIQUITIN.E3.BTB/POZ CULLIN3 | 23 | 0.57 | 0.011061243 | 0.43 | 0.16630904 | -0.17 | 0.5070262 | 0.43 | 0.04644402 |
| 29.5.11.4.5.2 PROTEIN.DEGRADATION.UBIQUITIN.E3.BTB/POZ CULLIN3.BTB/POZ | 17 | 0.53 | 0.05581836 | 0.41 | 0.2731611 | -0.18 | 0.50813884 | 0.53 | 0.022172147 |
| 29.5.11.20 PROTEIN.DEGRADATION.UBIQUITIN.PROTEASOM | 78 | 0.59 | 0.29756752 | 0.29 | 0.84790504 | -0.5 | 0.19142532 | -0.45 | 0.04874335 |
| 29.6 PROTEIN.FOLDING | 99 | -0.35 | 0.048686318 | -0.35 | 0.20330776 | 0.16 | 0.9518993 | -0.53 | 1.468995E-4 |
| 29.8 PROTEIN.ASSEMBLY AND COFACTOR LIGATION | 36 | -0.36 | 0.42965066 | -0.61 | 0.036039494 | -0.25 | 0.15218899 | -0.33 | 0.16539183 |
| 30.1 SIGNALLING.IN SUGAR AND NUTRIENT PHYSIOLOGY | 41 | 0.39 | 0.029967716 | 0.41 | 0.008097974 | 0.44 | 0.48874685 | 0.22 | 0.25714973 |
| 30.1.1 SIGNALLING.IN SUGAR AND NUTRIENT PHYSIOLOGY.MISC | 39 | 0.41 | 0.027583743 | 0.44 | 0.006533415 | 0.46 | 0.49045488 | 0.23 | 0.23879354 |
| 30.2.3 SIGNALLING.RECEPTOR KINASES.LEUCINE RICH REPEAT III | 45 | -0.53 | 0 | -0.4 | 0.0093819685 | 0.71 | 0.056103617 | -0.38 | 1 |
| 30.2.6 SIGNALLING.RECEPTOR KINASES.LEUCINE RICH REPEAT VI | 32 | -0.41 | 0.09525151 | -0.53 | 0.019639608 | 0.47 | 0.6083403 | -0.44 | 0.0010093258 |
| 30.2.19 SIGNALLING.RECEPTOR KINASES.LEGUME-LECTIN | 25 | 0.68 | 4.387366E-4 | 0.64 | 4.891564E-4 | 0.4 | 0.4670752 | 0.6 | 0.22157839 |
| 30.2.24 SIGNALLING.RECEPTOR KINASES.S-LOCUS GLYCOPROTEIN LIKE | 26 | 0.42 | 0.28495482 | 0.5 | 0.022523744 | -0.19 | 0.5066824 | 0.69 | 0.05942564 |
| 30.4.1 SIGNALLING.PHOSPHINOSITIDES.PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE | 22 | 0.36 | 0.920576 | 0.64 | 0.19061351 | 0.95 | 0.061923232 | 0.73 | 0.028416736 |
| 30.6 SIGNALLING.MAP KINASES | 70 | 0.4 | 0.28715125 | 0.37 | 0.016283862 | 0.3 | 0.32171714 | 0.51 | 0.009264792 |
| 30.11 SIGNALLING.LIGHT | 137 | 0.28 | 0.45390198 | 0.26 | 0.5774002 | 0.52 | 0.08470214 | 0.42 | 0.014448512 |
| 31.3 CELL.CYCLE | 105 | -0.17 | 0.14173974 | -0.22 | 0.049593944 | 0.21 | 0.7761407 | -0.21 | 0.009707306 |
| 31.3.1 CELL.CYCLE.PEPTIDYLPROLYL ISOMERASE | 38 | -0.18 | 0.9928613 | -0.32 | 0.31286275 | -0.55 | 0.06741125 | -0.53 | 0.048852943 |
| 33.1 DEVELOPMENT.STORAGE PROTEINS | 16 | 0.44 | 0.007455917 | 0.5 | 0.0015017855 | -0.19 | 0.79372007 | 0.81 | 0.19071557 |
| 33.3 DEVELOPMENT.SQUAMOSA PROMOTER BINDING LIKE (SPL) | 23 | 0.26 | 0.88053906 | 0.39 | 0.2667489 | 0.26 | 0.5419834 | 0.52 | 0.045515183 |
| 34.2 TRANSPORT.SUGARS | 53 | 0.19 | 0.07090984 | 0.42 | 0.023324626 | 0.23 | 0.7821433 | 0.34 | 0.08502282 |
| 34.3 TRANSPORT.AMINO ACIDS | 57 | 0.4 | 0.010675183 | 0.35 | 0.016327389 | 0.18 | 0.30911893 | 0.3 | 0.0017604637 |
| 34.4 TRANSPORT.NITRATE | 15 | 0.53 | 0.049854167 | 0.53 | 0.003144083 | 0.73 | 0.103615664 | 0.47 | 0.0021520716 |
| 34.10 TRANSPORT.NUCLEOTIDES | 16 | 0.44 | 0.08502921 | 0.25 | 0.15890177 | -0.31 | 0.2272854 | 0.44 | 0.02712706 |
| 34.12 TRANSPORT.METAL | 82 | 0.43 | 0.024233364 | 0.35 | 0.0739362 | -0.13 | 0.61367685 | 0.5 | 0.04030466 |
| 34.13 TRANSPORT.PEPTIDES AND OLIGOPEPTIDES | 46 | 0.37 | 0.0060728723 | 0.35 | 0.002947578 | 0.11 | 0.82442504 | 0.35 | 0.03518032 |
| 34.16 TRANSPORT.ABC TRANSPORTERS AND MULTIDRUG RESISTANCE SYSTEMS | 98 | 0.17 | 0.17659272 | 0.26 | 0.076915294 | 0.49 | 0.20609249 | 0.37 | 0.025028309 |
| 34.19.1 TRANSPORT.MAJOR INTRINSIC PROTEINS.PIP | 22 | 0.45 | 0.0038156267 | 0.36 | 0.11082029 | 0.64 | 0.05460933 | 0.59 | 0.014365824 |
| 34.22 TRANSPORT.CYCLIC NUCLEOTIDE OR CALCIUM REGULATED CHANNELS | 19 | 0.32 | 0.013851852 | 0.32 | 0.0035390612 | 0.26 | 0.4525727 | 0.26 | 0.15086642 |
| 35.1.5 NOT ASSIGNED.NO ONTOLOGY.PENTATRICOPEPTIDE (PPR) REPEAT-CONTAINING PROTEIN | 344 | -0.37 | 3.9840693E-4 | -0.4 | 0.020016717 | 0.44 | 0.09157254 | 0.37 | 0.5025684 |
| 35.1.27 NOT ASSIGNED.NO ONTOLOGY.TETRATRICOPEPTIDE REPEAT (TPR) | 177 | -0.36 | 0.014375224 | -0.29 | 0.22916399 | 0.45 | 0.45498872 | 0.23 | 0.9454502 |
| 35.1.40 NOT ASSIGNED.NO ONTOLOGY.GLYCINE RICH PROTEINS | 17 | 0.65 | 0.030568654 | 0.53 | 0.022884183 | 0.41 | 0.29081956 | 0.47 | 0.18719077 |
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| ###GSEA results for SxP; counts were normalized with edgeR; permutation by gene_set; p-value<0.01; FDR<0.05 | |||||||||||||||||||||||
| ###The first colum for each contrast gives the tags statistics: The percentage of gene hits before (for positive ES) or after (for negative ES) the peak in the running enrichment score. This gives an indication of the percentage of genes contributing to the enrichment score | |||||||||||||||||||||||
| ###The second column gives FDR q-values. Since the permutation by gene_set was used, only gene sets with FDR<0.05 should be considered. | |||||||||||||||||||||||
| high-wt | high1-wt | high2-wt | low-wt | low1-wt | low2-wt | high-low | |||||||||||||||||
| NAME | SIZE | h-w_tag | h-w_FDR | h1-w_tag | h1-w_FDR | h2-w_tag | h2-w_FDR | l-w_tag | l-w_FDR | l1-w_tag | l1-w_FDR | l2-w_tag | l2-w_FDR | h-l_tag | h-l_FDR | high-wt | high1-wt | high2-wt | low-wt | low1-wt | low2-wt | high-low | |
| 1 PS | 327 | -0.69 | 0 | -0.71 | 0 | -0.72 | 0 | -0.63 | 0.076130085 | -0.54 | 0.22886541 | -0.63 | 0.10133779 | -0.68 | 0 | - | - | - | - | ||||
| 1.1 PS.LIGHTREACTION | 221 | -0.68 | 0 | -0.67 | 0 | -0.69 | 0 | -0.56 | 0.09835544 | -0.53 | 0.20674433 | -0.65 | 0.16354212 | -0.66 | 0 | - | - | - | - | ||||
| 1.1.1 PS.LIGHTREACTION.PHOTOSYSTEM II | 92 | -0.79 | 0 | -0.79 | 0 | -0.8 | 0 | -0.62 | 0.32698074 | -0.53 | 0.5398772 | 0.05 | 0.4531852 | -0.8 | 0 | - | - | - | - | ||||
| 1.1.1.1 PS.LIGHTREACTION.PHOTOSYSTEM II.LHC-II | 38 | -0.92 | 0 | -0.89 | 0 | -0.92 | 0 | 0.11 | 0.2636716 | 0.11 | 0.21668893 | 0.08 | 0.22491582 | -0.92 | 0 | - | - | - | - | ||||
| 1.1.1.2 PS.LIGHTREACTION.PHOTOSYSTEM II.PSII POLYPEPTIDE SUBUNITS | 53 | -0.74 | 0 | -0.77 | 0 | -0.72 | 0 | -0.68 | 0.07628681 | -0.7 | 0.077949345 | -0.72 | 0.3739436 | -0.72 | 0 | - | - | - | - | ||||
| 1.1.2 PS.LIGHTREACTION.PHOTOSYSTEM I | 49 | -0.9 | 0 | -0.88 | 0 | -0.88 | 0 | -0.8 | 0.11158455 | -0.63 | 0.57967484 | -0.84 | 0.08912777 | -0.9 | 0 | - | - | - | - | ||||
| 1.1.2.1 PS.LIGHTREACTION.PHOTOSYSTEM I.LHC-I | 20 | -1 | 0 | -1 | 0 | -1 | 0 | -0.85 | 0.034731545 | -1 | 0.63424 | -0.85 | 0.043710813 | -1 | 0 | - | - | - | - | - | - | ||
| 1.1.2.2 PS.LIGHTREACTION.PHOTOSYSTEM I.PSI POLYPEPTIDE SUBUNITS | 27 | -0.85 | 0 | -0.85 | 0 | -0.85 | 0 | -0.85 | 0.43188563 | -0.74 | 0.49830413 | -0.85 | 0.44311962 | -0.85 | 0 | - | - | - | - | ||||
| 1.1.4 PS.LIGHTREACTION.ATP SYNTHASE | 33 | -0.61 | 2.5436588E-4 | -0.55 | 1.7376758E-4 | -0.61 | 0.0029318286 | -0.15 | 0.43157664 | -0.09 | 0.62246823 | -0.15 | 0.4389502 | -0.55 | 0.023821156 | - | - | - | - | ||||
| 1.1.6 PS.LIGHTREACTION.NADH DH | 15 | -0.67 | 0.039107766 | -0.47 | 0.021872235 | -0.4 | 0.021785889 | -0.47 | 0.06888999 | -0.33 | 0.1877887 | -0.33 | 0.07688964 | -0.33 | 0.06531188 | - | - | - | |||||
| 1.2 PS.PHOTORESPIRATION | 40 | -0.65 | 3.359912E-4 | -0.58 | 0.0046308814 | -0.58 | 1.1052755E-4 | -0.28 | 0.43090528 | -0.68 | 0.5735644 | -0.5 | 0.4475646 | -0.63 | 0.019164875 | - | - | - | - | ||||
| 1.3 PS.CALVIN CYCLE | 64 | -0.8 | 0 | -0.81 | 0 | -0.8 | 0 | -0.75 | 0.298029 | -0.52 | 0.94917697 | -0.73 | 0.16696365 | -0.83 | 0 | - | - | - | - | ||||
| 2.2 MAJOR CHO METABOLISM.DEGRADATION | 92 | 0.2 | 0.104238465 | 0.2 | 0.088641524 | 0.24 | 0.16607907 | 0.32 | 0.17801796 | 0.26 | 0.5888069 | 0.28 | 0.034705065 | 0.23 | 0.44141513 | + | |||||||
| 2.2.1 MAJOR CHO METABOLISM.DEGRADATION.SUCROSE | 47 | 0.3 | 0.038280528 | 0.34 | 0.04986095 | 0.3 | 0.06379577 | 0.32 | 0.8610339 | -0.21 | 0.38008517 | 0.28 | 0.34415329 | 0.28 | 0.069691494 | + | + | ||||||
| 2.2.2 MAJOR CHO METABOLISM.DEGRADATION.STARCH | 45 | 0.16 | 0.76280403 | 0.16 | 0.4955098 | 0.22 | 0.8496986 | 0.38 | 0.025008662 | 0.31 | 0.12989631 | 0.33 | 0.0071875514 | -0.53 | 0.6652691 | + | + | ||||||
| 2.2.2.1 MAJOR CHO METABOLISM.DEGRADATION.STARCH.STARCH CLEAVAGE | 21 | 0.38 | 0.2677475 | 0.24 | 0.25740162 | 0.43 | 0.14768204 | 0.52 | 0.005465854 | 0.38 | 0.13835807 | 0.43 | 0.009970122 | 0.33 | 0.78391147 | + | + | ||||||
| 3 MINOR CHO METABOLISM | 106 | 0.25 | 0.18555059 | 0.25 | 0.14923313 | 0.23 | 0.28202128 | 0.41 | 0.039075173 | 0.34 | 0.30227384 | 0.41 | 0.006037227 | 0.22 | 0.51755995 | + | + | ||||||
| 3.2 MINOR CHO METABOLISM.TREHALOSE | 24 | 0.29 | 0.24573344 | 0.21 | 0.5065927 | 0.29 | 0.08147449 | 0.58 | 0.032902814 | 0.5 | 0.54240316 | 0.63 | 0.002348945 | 0.17 | 0.78762037 | + | + | ||||||
| 5 FERMENTATION | 16 | 0.44 | 0.08059801 | 0.38 | 0.10815595 | 0.5 | 0.036756814 | 0.13 | 0.8510719 | 0.13 | 1 | 0.38 | 0.7794181 | 0.63 | 0.07884005 | + | |||||||
| 8 TCA / ORGANIC TRANSFORMATION | 102 | -0.24 | 0.98512816 | 0.25 | 0.9787616 | -0.22 | 0.6692487 | -0.39 | 0.057508778 | -0.41 | 0.21664628 | -0.42 | 0.045424 | 0.36 | 0.57342577 | - | |||||||
| 8.2 TCA / ORGANIC TRANSFORMATION.OTHER ORGANIC ACID TRANSFORMATIONS | 28 | -0.32 | 0.28416583 | -0.18 | 0.5144735 | -0.32 | 0.071223766 | -0.71 | 2.530303E-4 | -0.75 | 0.028531684 | -0.64 | 7.3265977E-4 | 0.36 | 0.6394126 | - | - | - | |||||
| 9 MITOCHONDRIAL ELECTRON TRANSPORT / ATP SYNTHESIS | 127 | 0.25 | 0.6206442 | 0.44 | 0.32280862 | 0.14 | 0.85019165 | -0.57 | 0.036466043 | -0.54 | 0.06810276 | -0.43 | 0.087006465 | 0.54 | 0.1524293 | - | |||||||
| 9.1 MITOCHONDRIAL ELECTRON TRANSPORT / ATP SYNTHESIS.NADH-DH (TYPE I) | 43 | 0.51 | 0.8293647 | 0.81 | 0.12292758 | -1 | 0.99612164 | -0.49 | 0.033190645 | -0.6 | 0.13131009 | -0.6 | 0.03593558 | 0.86 | 0.018366423 | - | - | + | |||||
| 9.1.1 MITOCHONDRIAL ELECTRON TRANSPORT / ATP SYNTHESIS.NADH-DH (TYPE I).COMPLEX I | 17 | -1 | 1 | 0.71 | 0.874699 | -0.71 | 0.75887024 | -0.71 | 0.009228948 | -0.76 | 0.067774385 | -0.76 | 0.063045844 | 0.71 | 0.19087838 | - | |||||||
| 9.1.2 MITOCHONDRIAL ELECTRON TRANSPORT / ATP SYNTHESIS.NADH-DH (TYPE I).LOCALISATION NOT CLEAR | 26 | 0.58 | 0.5810636 | 0.65 | 0.08489241 | 1 | 0.99962133 | -0.27 | 0.29654688 | -0.27 | 0.49786273 | -0.5 | 0.25942388 | 0.92 | 0.028250206 | + | |||||||
| 10.5.1 CELL WALL.CELL WALL PROTEINS.AGPS | 19 | -0.47 | 0.010098433 | -0.79 | 3.1511212E-4 | -0.26 | 0.13879487 | -1 | 0.2958957 | 0.58 | 0.45139873 | -0.79 | 0.061465506 | -0.53 | 0.019962203 | - | - | - | |||||
| 10.5.1.1 CELL WALL.CELL WALL PROTEINS.AGPS.AGP | 19 | -0.47 | 0.011842307 | -0.79 | 6.359397E-4 | -0.26 | 0.13463786 | -1 | 0.2990918 | 0.58 | 0.47622532 | -0.79 | 0.058826298 | -0.53 | 0.01650659 | - | - | - | |||||
| 10.6 CELL WALL.DEGRADATION | 110 | -0.39 | 0.040728014 | -0.41 | 0.048843674 | -0.28 | 0.07131803 | -0.1 | 0.5480588 | 0.32 | 0.55164856 | -0.14 | 0.15728869 | -0.36 | 0.061796322 | - | - | ||||||
| 10.6.2 CELL WALL.DEGRADATION.MANNAN-XYLOSE-ARABINOSE-FUCOSE | 36 | -0.36 | 0.28555548 | -0.33 | 0.52835923 | -0.28 | 0.52651936 | -0.25 | 0.009733883 | -0.17 | 0.18970048 | -0.28 | 2.8538206E-4 | 0.14 | 0.6336782 | - | - | ||||||
| 11.1.8 LIPID METABOLISM.FA SYNTHESIS AND FA ELONGATION.ACYL COA LIGASE | 18 | 0.44 | 0.027511483 | 0.56 | 0.024085753 | 0.44 | 0.038308956 | 0.56 | 0.13201687 | 0.22 | 0.52313703 | 0.33 | 0.08543265 | 0.33 | 0.11526737 | + | + | + | |||||
| 11.2 LIPID METABOLISM.FA DESATURATION | 15 | -0.6 | 0.010013015 | -0.53 | 0.014420427 | -0.4 | 0.007801382 | -0.4 | 0.44790322 | -1 | 0.97078246 | -0.6 | 0.38414523 | -0.6 | 0.03918574 | - | - | - | - | ||||
| 11.6 LIPID METABOLISM.LIPID TRANSFER PROTEINS ETC | 22 | 0.55 | 0.020412441 | 0.5 | 0.014772623 | 0.55 | 0.09868902 | 0.27 | 0.29133773 | 0.09 | 0.8324676 | 0.41 | 0.120417275 | 0.55 | 0.01930489 | + | + | + | |||||
| 11.9 LIPID METABOLISM.LIPID DEGRADATION | 114 | 0.42 | 0.015638635 | 0.39 | 0.050937954 | 0.33 | 0.01249595 | 0.26 | 0.5750684 | -0.21 | 0.20141217 | 0.35 | 0.08791565 | 0.26 | 0.023167312 | + | + | + | |||||
| 11.9.2 LIPID METABOLISM.LIPID DEGRADATION.LIPASES | 31 | 0.42 | 0.007641584 | 0.35 | 0.018994607 | 0.42 | 0.0010181912 | 0.26 | 0.67292994 | -0.23 | 0.066801 | 0.58 | 0.088378474 | 0.45 | 0.009875635 | + | + | + | + | ||||
| 11.9.2.1 LIPID METABOLISM.LIPID DEGRADATION.LIPASES.TRIACYLGLYCEROL LIPASE | 29 | 0.41 | 0.008721731 | 0.34 | 0.01901275 | 0.41 | 0.0015510775 | 0.55 | 0.8589573 | -0.24 | 0.06419616 | 0.59 | 0.1083041 | 0.41 | 0.010488501 | + | + | + | + | ||||
| 11.9.4 LIPID METABOLISM.LIPID DEGRADATION.BETA-OXIDATION | 30 | 0.5 | 0.01684036 | 0.6 | 0.0091033615 | 0.5 | 0.0431595 | 0.33 | 0.09372785 | 0.17 | 0.7786751 | 0.33 | 0.0068781385 | 0.33 | 0.11166402 | + | + | + | + | ||||
| 13.2 AMINO ACID METABOLISM.DEGRADATION | 57 | 0.39 | 0.006208702 | 0.32 | 0.0090007 | 0.26 | 0.0030272903 | 0.25 | 0.0957696 | 0.19 | 0.8136744 | 0.23 | 0.008359415 | 0.3 | 0.011144033 | + | + | + | + | + | |||
| 13.2.3 AMINO ACID METABOLISM.DEGRADATION.ASPARTATE FAMILY | 18 | 0.33 | 0.10599876 | 0.28 | 0.14234638 | 0.28 | 0.07437859 | 0.28 | 0.037559886 | 0.33 | 0.45121333 | 0.28 | 0.007291763 | 0.28 | 0.3353544 | + | + | ||||||
| 16 SECONDARY METABOLISM | 272 | 0.4 | 1.0721982E-4 | 0.37 | 5.896551E-4 | 0.35 | 1.2190477E-4 | 0.29 | 0.12820297 | -0.22 | 0.3280745 | 0.37 | 1.527778E-4 | 0.35 | 0.0065947096 | + | + | + | + | + | |||
| 16.1 SECONDARY METABOLISM.ISOPRENOIDS | 97 | 0.3 | 0.10570696 | 0.26 | 0.1393193 | 0.29 | 0.03261879 | 0.18 | 0.90154666 | -0.14 | 0.08831047 | 0.28 | 0.16245332 | 0.23 | 0.131286 | + | |||||||
| 16.1.4 SECONDARY METABOLISM.ISOPRENOIDS.CAROTENOIDS | 24 | -0.58 | 0.07759891 | -0.46 | 0.09567448 | -0.5 | 0.07376676 | 0.54 | 0.54755175 | 0.17 | 0.8289166 | 0.42 | 0.3455316 | -0.75 | 0.03594651 | - | |||||||
| 16.1.5 SECONDARY METABOLISM.ISOPRENOIDS.TERPENOIDS | 16 | 0.44 | 2.9422782E-4 | 0.44 | 2.219731E-4 | 0.5 | 0 | -0.19 | 0.7107832 | -0.25 | 0.06299355 | 0.5 | 0.111096025 | 0.56 | 0 | + | + | + | + | ||||
| 16.2 SECONDARY METABOLISM.PHENYLPROPANOIDS | 72 | 0.46 | 0 | 0.57 | 0 | 0.5 | 0 | 0.43 | 0.07453526 | 0.14 | 0.772443 | 0.56 | 0 | 0.57 | 0 | + | + | + | + | + | |||
| 16.2.1 SECONDARY METABOLISM.PHENYLPROPANOIDS.LIGNIN BIOSYNTHESIS | 44 | 0.5 | 0 | 0.57 | 1.7757848E-4 | 0.5 | 0 | 0.59 | 0.023717409 | 0.2 | 0.379277 | 0.64 | 0 | 0.55 | 0 | + | + | + | + | + | + | ||
| 16.5 SECONDARY METABOLISM.SULFUR-CONTAINING | 24 | 0.54 | 0.0029080515 | 0.5 | 0.009852733 | 0.54 | 0.00972129 | 0.38 | 0.44766372 | 0.29 | 0.9662423 | 0.5 | 0.28396988 | 0.46 | 0.015002461 | + | + | + | + | ||||
| 16.5.1 SECONDARY METABOLISM.SULFUR-CONTAINING.GLUCOSINOLATES | 22 | 0.59 | 0.0032684794 | 0.55 | 0.013217016 | 0.59 | 0.0040456858 | 0.36 | 0.55616 | 0.27 | 0.99461555 | 0.5 | 0.3434796 | 0.5 | 0.0108669745 | + | + | + | + | ||||
| 16.5.1.1 SECONDARY METABOLISM.SULFUR-CONTAINING.GLUCOSINOLATES.SYNTHESIS | 20 | 0.6 | 0.0057333694 | 0.55 | 0.013542046 | 0.6 | 0.0048465393 | 0.4 | 0.42419526 | 0.3 | 0.95357805 | 0.55 | 0.2722648 | 0.5 | 0.014126717 | + | + | + | + | ||||
| 16.5.1.1.1 SECONDARY METABOLISM.SULFUR-CONTAINING.GLUCOSINOLATES.SYNTHESIS.ALIPHATIC | 20 | 0.6 | 0.007950532 | 0.55 | 0.01936325 | 0.6 | 0.0045521064 | 0.4 | 0.4366753 | 0.3 | 0.96475065 | 0.55 | 0.24820788 | 0.5 | 0.017283725 | + | + | + | + | ||||
| 16.8 SECONDARY METABOLISM.FLAVONOIDS | 45 | 0.44 | 0.07819857 | 0.53 | 0.06859261 | 0.27 | 0.031335175 | 0.33 | 0.3185805 | -0.29 | 0.45041254 | 0.49 | 0.058552884 | 0.42 | 0.10562161 | + | |||||||
| 17 HORMONE METABOLISM | 361 | 0.25 | 0.0223946 | 0.23 | 0.032183178 | 0.24 | 0.02480053 | 0.42 | 0.07345289 | 0.27 | 0.4218649 | 0.39 | 0.027226612 | 0.24 | 0.06868056 | + | + | + | + | ||||
| 17.1 HORMONE METABOLISM.ABSCISIC ACID | 51 | 0.57 | 0.0015286502 | 0.47 | 4.3905247E-4 | 0.53 | 0.006546753 | 0.63 | 0.005865276 | 0.37 | 0.08544952 | 0.61 | 1.8333334E-4 | 0.29 | 0.027644359 | + | + | + | + | + | + | ||
| 17.1.2 HORMONE METABOLISM.ABSCISIC ACID.SIGNAL TRANSDUCTION | 20 | 0.55 | 0.01443613 | 0.6 | 0.0099755395 | 0.65 | 0.021173703 | 0.4 | 0.04124602 | 0.35 | 0.11238225 | 0.7 | 0.0068289484 | 0.6 | 0.06613802 | + | + | + | + | + | |||
| 17.3 HORMONE METABOLISM.BRASSINOSTEROID | 42 | 0.31 | 1 | -0.1 | 0.98938346 | 0.33 | 0.99130285 | 0.52 | 0.033234604 | 0.45 | 0.06906154 | 0.45 | 0.097577445 | -0.17 | 0.16637272 | + | |||||||
| 17.4 HORMONE METABOLISM.CYTOKININ | 18 | -0.11 | 1 | 0.11 | 1 | -0.11 | 0.9951911 | 0.56 | 0.3404666 | 0.56 | 0.039267104 | -0.33 | 0.6703844 | -0.33 | 0.73764247 | + | |||||||
| 17.6 HORMONE METABOLISM.GIBBERELIN | 20 | 0.55 | 0.0077047287 | 0.6 | 0.0059445524 | 0.5 | 0.05938467 | -0.2 | 0.2180508 | -0.35 | 0.19577864 | -0.2 | 0.37051365 | 0.6 | 0.0094964355 | + | + | + | |||||
| 17.7 HORMONE METABOLISM.JASMONATE | 33 | 0.73 | 0 | 0.79 | 0.0011733698 | 0.64 | 1.0666667E-4 | 0.42 | 0.0728531 | -0.27 | 0.3976645 | 0.73 | 0.011227489 | 0.79 | 0 | + | + | + | + | + | |||
| 17.7.1 HORMONE METABOLISM.JASMONATE.SYNTHESIS-DEGRADATION | 24 | 0.75 | 0.008232542 | 0.79 | 0.024215229 | 0.88 | 0.0041474076 | 0.33 | 0.5540746 | -0.29 | 0.17633013 | 0.75 | 0.08177987 | 0.75 | 0.008387654 | + | + | + | + | ||||
| 19 TETRAPYRROLE SYNTHESIS | 70 | -0.73 | 0 | -0.7 | 0 | -0.67 | 0 | 0.13 | 0.9256017 | 0.13 | 0.3193062 | -0.61 | 0.09954431 | -0.8 | 0 | - | - | - | - | ||||
| 20.1.2.2 STRESS.BIOTIC.RECEPTORS.TIR-NBS-LRR | 25 | 0.6 | 0.10258635 | 0.44 | 0.21811482 | 0.68 | 0.100975364 | 0.56 | 0.09089801 | 0.28 | 0.3543182 | 0.6 | 0.007248987 | 0.68 | 0.4416433 | + | |||||||
| 20.1.7 STRESS.BIOTIC.PR-PROTEINS | 60 | 0.45 | 0 | 0.52 | 0 | 0.37 | 0 | 0.28 | 0.10711737 | -0.2 | 0.24873833 | 0.3 | 0.016726736 | 0.43 | 0 | + | + | + | + | + | |||
| 20.1.7.3 STRESS.BIOTIC.PR-PROTEINS.PR3/4/8/11 (CHITINASES AND CHITIN BINDING PROTEINS) | 16 | 0.5 | 1.2253695E-4 | 0.44 | 0.001656476 | 0.5 | 5.233576E-4 | 0.38 | 0.043014646 | 0.25 | 0.21417937 | 0.44 | 0.0071703875 | 0.31 | 0.010603486 | + | + | + | + | + | + | ||
| 20.2.3 STRESS.ABIOTIC.DROUGHT/SALT | 36 | 0.31 | 0.04120248 | 0.42 | 0.08215382 | 0.42 | 0.076356724 | 0.28 | 0.3080522 | -0.19 | 0.24137655 | 0.31 | 0.10843058 | 0.25 | 0.058060303 | + | |||||||
| 21.2.1 REDOX.ASCORBATE AND GLUTATHIONE.ASCORBATE | 31 | -0.48 | 0.15357254 | -0.35 | 0.48396775 | -0.55 | 0.043349415 | -0.52 | 0.021951912 | -0.65 | 0.057773907 | -0.65 | 0.115120165 | 0.19 | 0.97378373 | - | - | ||||||
| 21.4 REDOX.GLUTAREDOXINS | 18 | -0.44 | 0.015854878 | -0.44 | 0.04056684 | -0.44 | 0.014765607 | -0.17 | 0.5712155 | -0.22 | 0.25382268 | -0.22 | 0.43634123 | -0.44 | 0.03566066 | - | - | - | - | ||||
| 23.1 NUCLEOTIDE METABOLISM.SYNTHESIS | 38 | -0.63 | 0.07677214 | -0.68 | 0.1661373 | -0.68 | 0.07461778 | -0.55 | 0.39168483 | 0.39 | 0.9398955 | -0.58 | 0.044381414 | -0.5 | 0.29394066 | - | |||||||
| 23.4 NUCLEOTIDE METABOLISM.PHOSPHOTRANSFER AND PYROPHOSPHATASES | 49 | -0.33 | 0.35428187 | -0.37 | 0.77271926 | -0.29 | 0.31097904 | -0.47 | 0.02319725 | -0.45 | 0.14887618 | -0.49 | 0.044337805 | 0.1 | 0.9453975 | - | - | ||||||
| 26.2 MISC.UDP GLUCOSYL AND GLUCORONYL TRANSFERASES | 176 | 0.26 | 0.019341564 | 0.27 | 0.06283478 | 0.35 | 0.019109935 | 0.32 | 0.45163676 | 0.28 | 0.9648087 | 0.21 | 0.08497241 | 0.3 | 0.044461574 | + | + | + | |||||
| 26.3 MISC.GLUCO-, GALACTO- AND MANNOSIDASES | 130 | 0.22 | 0.20028627 | 0.21 | 0.19777207 | 0.18 | 0.22841515 | 0.23 | 0.092394724 | 0.3 | 0.4435844 | 0.35 | 0.043691225 | 0.22 | 0.40765294 | + | |||||||
| 26.4 MISC.BETA 1,3 GLUCAN HYDROLASES | 52 | 0.48 | 0.07076017 | 0.38 | 0.1991943 | 0.44 | 0.014646097 | -0.15 | 0.7332414 | -0.15 | 0.7988274 | 0.15 | 0.5824349 | 0.44 | 0.025961248 | + | + | ||||||
| 26.4.1 MISC.BETA 1,3 GLUCAN HYDROLASES.GLUCAN ENDO-1,3-BETA-GLUCOSIDASE | 44 | 0.48 | 0.065564066 | 0.43 | 0.2110302 | 0.45 | 0.008232738 | 0.14 | 0.7348826 | 0.3 | 0.94121635 | 0.16 | 0.38830838 | 0.3 | 0.028336989 | + | + | ||||||
| 26.8 MISC.NITRILASES, NITRILE LYASES, BERBERINE BRIDGE ENZYMES, RETICULINE OXIDASES, TROPONINE REDUCTASES | 38 | 0.37 | 0.038217314 | 0.32 | 0.04333527 | 0.34 | 0.0964908 | 0.24 | 0.22716403 | -0.08 | 0.38380766 | 0.29 | 0.18407887 | 0.39 | 0.051637497 | + | + | ||||||
| 26.9 MISC.GLUTATHIONE S TRANSFERASES | 40 | 0.43 | 0.039047193 | 0.45 | 0.027506005 | 0.33 | 0.055029824 | 0.35 | 0.20766424 | -0.23 | 0.40119052 | 0.43 | 0.016198862 | 0.43 | 0.03317513 | + | + | + | + | ||||
| 26.10 MISC.CYTOCHROME P450 | 119 | 0.39 | 7.2915544E-4 | 0.4 | 0.0018070647 | 0.34 | 7.1709696E-4 | 0.39 | 0.0022542768 | 0.3 | 0.13539442 | 0.38 | 0 | 0.38 | 0.024246166 | + | + | + | + | + | + | ||
| 26.12 MISC.PEROXIDASES | 27 | 0.41 | 0.056105755 | 0.44 | 0.09827162 | 0.37 | 0.09298055 | 0.33 | 0.6902009 | 0.22 | 0.9526248 | 0.44 | 0.6531543 | 0.37 | 0.027615394 | + | |||||||
| 26.18 MISC.INVERTASE/PECTIN METHYLESTERASE INHIBITOR FAMILY PROTEIN | 16 | -0.75 | 1.0824537E-4 | -0.75 | 1.8204222E-4 | -0.5 | 2.7324262E-4 | -0.56 | 0.003358444 | -0.63 | 0.1783952 | -0.63 | 7.752404E-5 | -0.56 | 0.0044458658 | - | - | - | - | - | - | ||
| 27.1.2 RNA.PROCESSING.RNA HELICASE | 52 | -0.52 | 0.17591128 | -0.6 | 0.12554522 | -0.38 | 0.69506085 | 0.73 | 0.38564312 | 0.56 | 0.14255778 | -0.04 | 0.97756594 | -0.75 | 0.032197975 | - | |||||||
| 27.3.3 RNA.REGULATION OF TRANSCRIPTION.AP2/EREBP, APETALA2/ETHYLENE-RESPONSIVE ELEMENT BINDING PROTEIN FAMILY | 72 | 0.36 | 0.041192688 | 0.4 | 0.07410493 | 0.24 | 0.0147968475 | 0.31 | 0.024880104 | 0.26 | 0.29266995 | 0.36 | 0.007812603 | 0.25 | 0.07309445 | + | + | + | + | ||||
| 27.3.6 RNA.REGULATION OF TRANSCRIPTION.BASIC HELIX-LOOP-HELIX FAMILY (BHLH) | 119 | 0.34 | 0.21512465 | 0.3 | 0.34142444 | 0.38 | 0.13710296 | 0.4 | 0.043818787 | 0.41 | 0.29029208 | 0.48 | 0.034543637 | 0.21 | 0.642282 | + | + | ||||||
| 27.3.8 RNA.REGULATION OF TRANSCRIPTION.C2C2(ZN) DOF ZINC FINGER FAMILY | 32 | 0.38 | 0.033149853 | 0.53 | 0.008766378 | 0.41 | 0.037678193 | 0.34 | 0.06895708 | 0.38 | 0.29621294 | 0.28 | 0.07922037 | 0.41 | 0.14820386 | + | + | + | |||||
| 27.3.12 RNA.REGULATION OF TRANSCRIPTION.C3H ZINC FINGER FAMILY | 34 | 0.29 | 0.0802099 | 0.26 | 0.02415784 | 0.24 | 0.10939952 | 0.26 | 0.09480323 | 0.32 | 0.0906931 | 0.18 | 0.16765939 | 0.12 | 0.32016993 | + | |||||||
| 27.3.22 RNA.REGULATION OF TRANSCRIPTION.HOMEOBOX TRANSCRIPTION FACTOR FAMILY (HB) | 60 | 0.33 | 0.032452077 | 0.23 | 0.11062129 | 0.3 | 0.006888031 | 0.45 | 0.058449645 | 0.27 | 0.19522601 | 0.5 | 0.025534881 | 0.23 | 0.110887654 | + | + | + | |||||
| 27.3.25 RNA.REGULATION OF TRANSCRIPTION.MYB DOMAIN TRANSCRIPTION FACTOR FAMILY | 91 | 0.42 | 0.13354778 | 0.27 | 0.16131689 | 0.33 | 0.099592626 | 0.36 | 0.3433032 | -0.26 | 0.5789431 | 0.48 | 0.04124036 | 0.32 | 0.18718722 | + | |||||||
| 27.3.27 RNA.REGULATION OF TRANSCRIPTION.NAC DOMAIN TRANSCRIPTION FACTOR FAMILY | 47 | 0.38 | 0 | 0.4 | 3.7605996E-4 | 0.36 | 0 | 0.53 | 0.0027121562 | 0.38 | 0.3203006 | 0.62 | 0 | 0.34 | 0.009335056 | + | + | + | + | + | + | ||
| 27.3.32 RNA.REGULATION OF TRANSCRIPTION.WRKY DOMAIN TRANSCRIPTION FACTOR FAMILY | 53 | 0.66 | 0 | 0.55 | 0 | 0.58 | 0 | 0.3 | 0.7139528 | -0.25 | 0.18964848 | 0.4 | 0.09632791 | 0.6 | 0 | + | + | + | + | ||||
| 27.3.35 RNA.REGULATION OF TRANSCRIPTION.BZIP TRANSCRIPTION FACTOR FAMILY | 107 | 0.46 | 0.006303817 | 0.5 | 0.0046387245 | 0.46 | 0.003394396 | 0.45 | 0.096126355 | 0.36 | 0.58235383 | 0.44 | 0.018075787 | 0.37 | 0.015358092 | + | + | + | + | + | |||
| 27.3.40 RNA.REGULATION OF TRANSCRIPTION.AUX/IAA FAMILY | 27 | 0.26 | 0.65819466 | -0.19 | 0.64965236 | 0.19 | 0.96826917 | 0.56 | 0.007838126 | 0.56 | 0.020862512 | 0.63 | 0.011766956 | -0.56 | 0.1926128 | + | + | + | |||||
| 27.3.57 RNA.REGULATION OF TRANSCRIPTION.JUMONJI FAMILY | 22 | 0.32 | 1 | -0.41 | 0.98817945 | 0.41 | 0.8505745 | 0.68 | 0.038073428 | 0.73 | 0.129937 | 0.55 | 0.09546817 | -0.36 | 0.23499753 | + | |||||||
| 27.3.63 RNA.REGULATION OF TRANSCRIPTION.PHD FINGER TRANSCRIPTION FACTOR | 32 | 0.5 | 1 | -0.34 | 0.99825853 | 0.59 | 0.43449914 | 0.5 | 0.056706198 | 0.59 | 0.07137724 | 0.72 | 0.04674485 | -0.44 | 0.37899932 | + | |||||||
| 27.3.69 RNA.REGULATION OF TRANSCRIPTION.SET-DOMAIN TRANSCRIPTIONAL REGULATOR FAMILY | 40 | -0.28 | 1 | -0.4 | 0.33784863 | -0.15 | 1 | 0.68 | 0.0136096375 | 0.83 | 0 | 0.55 | 0.4620402 | -0.65 | 0.032524686 | + | + | - | |||||
| 28.1 DNA.SYNTHESIS/CHROMATIN STRUCTURE | 346 | -0.37 | 0.0011042219 | -0.36 | 0.001019109 | -0.3 | 0.002071807 | -0.24 | 0.13580005 | 0.28 | 0.099563226 | -0.36 | 0 | -0.45 | 0.0122621795 | - | - | - | - | - | |||
| 28.1.1 DNA.SYNTHESIS/CHROMATIN STRUCTURE.RETROTRANSPOSON/TRANSPOSASE | 75 | -0.27 | 1 | 0.04 | 0.99885 | -0.28 | 1 | -0.45 | 0.034147106 | -0.49 | 0.16243896 | -0.48 | 0.06122161 | 0.24 | 0.68773705 | - | |||||||
| 28.1.1.4 DNA.SYNTHESIS/CHROMATIN STRUCTURE.RETROTRANSPOSON/TRANSPOSASE.HAT-LIKE TRANSPOSASE | 63 | -0.27 | 0.99915564 | -0.25 | 0.99412966 | -0.27 | 1 | -0.41 | 0.045819487 | -0.48 | 0.17942931 | -0.37 | 0.048842132 | 0.24 | 0.78532755 | - | - | ||||||
| 28.1.3 DNA.SYNTHESIS/CHROMATIN STRUCTURE.HISTONE | 55 | -0.69 | 0 | -0.53 | 0 | -0.65 | 0 | -0.67 | 0 | 0.98 | 1 | -0.65 | 0 | -0.56 | 5.5980013E-4 | - | - | - | - | - | - | ||
| 28.1.3.2 DNA.SYNTHESIS/CHROMATIN STRUCTURE.HISTONE.CORE | 51 | -0.75 | 0 | -0.57 | 0 | -0.71 | 0 | -0.73 | 0 | 0.35 | 1 | -0.71 | 0 | -0.61 | 1.7269346E-4 | - | - | - | - | - | - | ||
| 28.1.3.2.3 DNA.SYNTHESIS/CHROMATIN STRUCTURE.HISTONE.CORE.H3 | 21 | -0.71 | 0 | -0.71 | 0 | -0.76 | 0 | -0.81 | 1.5625001E-4 | 0.38 | 0.9999268 | -0.76 | 0 | -0.71 | 0.0016797087 | - | - | - | - | - | - | ||
| 28.1.3.2.4 DNA.SYNTHESIS/CHROMATIN STRUCTURE.HISTONE.CORE.H4 | 16 | -0.88 | 1.1316561E-4 | -0.94 | 0.0019710772 | -0.88 | 5.846299E-5 | -0.88 | 1.25E-4 | 0.5 | 0.93810785 | -0.88 | 0 | -0.88 | 0.020640608 | - | - | - | - | - | - | ||
| 29.1 PROTEIN.AA ACTIVATION | 80 | -0.35 | 0.052831385 | -0.54 | 0.050278563 | -0.41 | 0.060346577 | -0.36 | 0.5847728 | 0.13 | 0.9521383 | -0.59 | 0.045210283 | -0.49 | 0.07754269 | - | |||||||
| 29.2.1.1 PROTEIN.SYNTHESIS.RIBOSOMAL PROTEIN.PROKARYOTIC | 134 | -0.51 | 0 | -0.51 | 0 | -0.57 | 0 | -0.76 | 0 | -0.63 | 0.02541579 | -0.77 | 0 | -0.49 | 0 | - | - | - | - | - | - | - | |
| 29.2.1.1.1 PROTEIN.SYNTHESIS.RIBOSOMAL PROTEIN.PROKARYOTIC.CHLOROPLAST | 94 | -0.69 | 0 | -0.69 | 0 | -0.69 | 0 | -0.74 | 1.7857144E-4 | -0.66 | 0.050373886 | -0.78 | 0 | -0.7 | 0 | - | - | - | - | - | - | ||
| 29.2.1.1.1.1 PROTEIN.SYNTHESIS.RIBOSOMAL PROTEIN.PROKARYOTIC.CHLOROPLAST.30S SUBUNIT | 27 | -0.78 | 0 | -0.78 | 0 | -0.78 | 0 | -0.67 | 0.0014762966 | -0.56 | 0.074750826 | -0.74 | 0 | -0.74 | 0 | - | - | - | - | - | - | ||
| 29.2.1.1.1.2 PROTEIN.SYNTHESIS.RIBOSOMAL PROTEIN.PROKARYOTIC.CHLOROPLAST.50S SUBUNIT | 66 | -0.65 | 0 | -0.65 | 0 | -0.65 | 0 | -0.79 | 1.3888889E-4 | -0.68 | 0.063561395 | -0.8 | 0 | -0.68 | 0 | - | - | - | - | - | - | ||
| 29.2.1.1.3 PROTEIN.SYNTHESIS.RIBOSOMAL PROTEIN.PROKARYOTIC.UNKNOWN ORGANELLAR | 23 | -0.65 | 0.104387775 | -0.7 | 0.67815953 | -0.65 | 0.05259525 | -0.74 | 0.008506156 | -0.65 | 0.20352784 | -0.7 | 0.00618697 | -0.09 | 0.92883414 | - | - | ||||||
| 29.2.1.1.3.2 PROTEIN.SYNTHESIS.RIBOSOMAL PROTEIN.PROKARYOTIC.UNKNOWN ORGANELLAR.50S SUBUNIT | 16 | -0.69 | 0.29636392 | -0.75 | 0.9496246 | -0.81 | 0.14729407 | -0.88 | 0.022044923 | -0.81 | 0.14722912 | -0.88 | 0.009673826 | 1 | 0.9488194 | - | - | ||||||
| 29.2.1.2 PROTEIN.SYNTHESIS.RIBOSOMAL PROTEIN.EUKARYOTIC | 359 | -0.75 | 0 | -0.7 | 0 | -0.82 | 0 | -0.8 | 0 | -0.46 | 0.06388026 | -0.88 | 0 | -0.92 | 0.9973535 | - | - | - | - | - | |||
| 29.2.1.2.1 PROTEIN.SYNTHESIS.RIBOSOMAL PROTEIN.EUKARYOTIC.40S SUBUNIT | 135 | -0.73 | 0 | -0.71 | 1.6621246E-4 | -0.78 | 0 | -0.81 | 0 | -0.53 | 0.19311222 | -0.85 | 0 | -0.38 | 1 | - | - | - | - | - | |||
| 29.2.1.2.2 PROTEIN.SYNTHESIS.RIBOSOMAL PROTEIN.EUKARYOTIC.60S SUBUNIT | 223 | -0.75 | 0 | -0.74 | 0 | -0.85 | 0 | -0.79 | 0 | -0.45 | 0.07201602 | -0.88 | 0 | 0.98 | 0.9986812 | - | - | - | - | - | |||
| 29.2.2 PROTEIN.SYNTHESIS.RIBOSOME BIOGENESIS | 187 | -0.45 | 0.02159551 | -0.49 | 0.018829055 | -0.48 | 0.04404152 | -0.24 | 0.5650544 | 0.29 | 0.96363294 | -0.37 | 0.1088703 | -0.48 | 0.10582101 | - | - | - | |||||
| 29.2.2.3 PROTEIN.SYNTHESIS.RIBOSOME BIOGENESIS.PRE-RRNA PROCESSING AND MODIFICATIONS | 150 | -0.5 | 0.006685409 | -0.47 | 0.0039060272 | -0.49 | 0.03949409 | -0.26 | 0.2917789 | -0.13 | 0.9790902 | -0.39 | 0.06968038 | -0.55 | 0.08186086 | - | - | - | |||||
| 29.2.2.3.3 PROTEIN.SYNTHESIS.RIBOSOME BIOGENESIS.PRE-RRNA PROCESSING AND MODIFICATIONS.METHYLOTRANSFERASES | 99 | -0.48 | 0.011422412 | -0.51 | 0.0073951357 | -0.47 | 0.060399868 | -0.2 | 0.16167387 | -0.16 | 0.53108805 | -0.27 | 0.25949928 | -0.46 | 0.105065525 | - | - | ||||||
| 29.3.2 PROTEIN.TARGETING.MITOCHONDRIA | 30 | 0.2 | 1 | 0.37 | 1 | -1 | 1 | -0.47 | 0.034118805 | -0.37 | 0.9526236 | -0.73 | 0.00844048 | 0.3 | 0.53077406 | - | - | ||||||
| 29.3.3 PROTEIN.TARGETING.CHLOROPLAST | 38 | -0.63 | 0.010055174 | -0.68 | 0.049743097 | -0.63 | 0.005072763 | -0.32 | 0.8852134 | 0.16 | 0.6830795 | -0.47 | 0.23829395 | -0.71 | 0.050828613 | - | - | - | |||||
| 29.3.4 PROTEIN.TARGETING.SECRETORY PATHWAY | 152 | 0.45 | 0.17059357 | 0.55 | 0.28979018 | 0.46 | 0.14648363 | -0.24 | 0.5672916 | -0.38 | 0.3837795 | -0.32 | 1 | 0.51 | 0.03965825 | + | |||||||
| 29.4.1.57 PROTEIN.POSTRANSLATIONAL MODIFICATION.KINASE.RECEPTOR LIKE CYTOPLASMATIC KINASE VII | 48 | 0.38 | 0.009904807 | 0.42 | 0.014405927 | 0.4 | 0.014655115 | -0.17 | 0.35126272 | -0.33 | 0.06666437 | 0.21 | 0.94196856 | 0.31 | 1.3384188E-4 | + | + | + | + | ||||
| 29.5.2 PROTEIN.DEGRADATION.AUTOPHAGY | 22 | 0.41 | 0.040441904 | 0.59 | 0.018514566 | 0.45 | 0.023536652 | 0.36 | 0.11818822 | 0.36 | 0.8929801 | 0.55 | 0.0029523498 | 0.64 | 0.11612758 | + | + | + | + | ||||
| 29.5.3 PROTEIN.DEGRADATION.CYSTEINE PROTEASE | 48 | 0.42 | 0.104007736 | 0.48 | 0.020175852 | 0.33 | 0.17012058 | 0.4 | 0.52526236 | -0.17 | 0.61099964 | 0.35 | 0.09863737 | 0.48 | 0.06745643 | + | |||||||
| 29.5.9 PROTEIN.DEGRADATION.AAA TYPE | 25 | 0.32 | 0.057617012 | 0.24 | 0.06830216 | 0.28 | 0.032145746 | 0.12 | 0.9502508 | -0.2 | 0.5752229 | 0.04 | 0.993707 | 0.28 | 0.029034935 | + | + | ||||||
| 29.5.11.3 PROTEIN.DEGRADATION.UBIQUITIN.E2 | 53 | 0.28 | 0.21067885 | 0.66 | 0.06285515 | 0.17 | 0.8483536 | -0.53 | 0.033184744 | -0.66 | 0.029674966 | -0.43 | 0.36686432 | 0.72 | 0.00812613 | - | - | + | |||||
| 29.5.11.4.1 PROTEIN.DEGRADATION.UBIQUITIN.E3.HECT | 15 | 0.73 | 0.05364892 | 0.47 | 0.1762318 | 0.93 | 0.110698804 | 0.87 | 0.008390166 | 0.8 | 0.03046303 | 0.93 | 0.0022835338 | 1 | 0.9764751 | + | + | + | |||||
| 29.5.11.4.3 PROTEIN.DEGRADATION.UBIQUITIN.E3.SCF | 240 | 0.21 | 0.6283728 | 0.34 | 0.45180616 | 0.3 | 0.8539541 | 0.36 | 0.07638211 | 0.37 | 0.59961385 | 0.57 | 0.0069584246 | -0.15 | 0.7339507 | + | |||||||
| 29.5.11.4.3.2 PROTEIN.DEGRADATION.UBIQUITIN.E3.SCF.FBOX | 219 | 0.22 | 0.60965014 | 0.36 | 0.44086018 | 0.19 | 0.83293647 | 0.39 | 0.05712159 | 0.39 | 0.5420592 | 0.56 | 0.0027041303 | -0.16 | 0.65795904 | + | |||||||
| 29.5.11.4.5 PROTEIN.DEGRADATION.UBIQUITIN.E3.BTB/POZ CULLIN3 | 23 | 0.48 | 0.046761144 | 0.57 | 0.011061243 | 0.43 | 0.16630904 | 0.48 | 0.46090564 | -0.17 | 0.5070262 | 0.43 | 0.04644402 | 0.26 | 0.18370198 | + | + | + | |||||
| 29.5.11.4.5.2 PROTEIN.DEGRADATION.UBIQUITIN.E3.BTB/POZ CULLIN3.BTB/POZ | 17 | 0.47 | 0.092705384 | 0.53 | 0.05581836 | 0.41 | 0.2731611 | 0.53 | 0.31601885 | -0.18 | 0.50813884 | 0.53 | 0.022172147 | 0.18 | 0.4997717 | + | |||||||
| 29.5.11.20 PROTEIN.DEGRADATION.UBIQUITIN.PROTEASOM | 78 | 0.6 | 0.6270864 | 0.59 | 0.29756752 | 0.29 | 0.84790504 | -0.5 | 0.06610675 | -0.5 | 0.19142532 | -0.45 | 0.04874335 | 0.79 | 0.013309115 | - | + | ||||||
| 29.6 PROTEIN.FOLDING | 99 | -0.32 | 0.09689289 | -0.35 | 0.048686318 | -0.35 | 0.20330776 | -0.56 | 0.05879105 | 0.16 | 0.9518993 | -0.53 | 1.468995E-4 | -0.22 | 0.32409665 | - | - | ||||||
| 29.8 PROTEIN.ASSEMBLY AND COFACTOR LIGATION | 36 | -0.47 | 0.14963847 | -0.36 | 0.42965066 | -0.61 | 0.036039494 | -0.22 | 0.0783674 | -0.25 | 0.15218899 | -0.33 | 0.16539183 | -0.31 | 0.67659336 | - | |||||||
| 30.1 SIGNALLING.IN SUGAR AND NUTRIENT PHYSIOLOGY | 41 | 0.46 | 0.027456196 | 0.39 | 0.029967716 | 0.41 | 0.008097974 | 0.32 | 0.18390733 | 0.44 | 0.48874685 | 0.22 | 0.25714973 | 0.39 | 0.03297991 | + | + | + | + | ||||
| 30.1.1 SIGNALLING.IN SUGAR AND NUTRIENT PHYSIOLOGY.MISC | 39 | 0.49 | 0.019286465 | 0.41 | 0.027583743 | 0.44 | 0.006533415 | 0.33 | 0.16357456 | 0.46 | 0.49045488 | 0.23 | 0.23879354 | 0.41 | 0.024945958 | + | + | + | + | ||||
| 30.2.3 SIGNALLING.RECEPTOR KINASES.LEUCINE RICH REPEAT III | 45 | -0.53 | 1.18554446E-4 | -0.53 | 0 | -0.4 | 0.0093819685 | 0.44 | 0.28105342 | 0.71 | 0.056103617 | -0.38 | 1 | -0.6 | 0 | - | - | - | - | ||||
| 30.2.6 SIGNALLING.RECEPTOR KINASES.LEUCINE RICH REPEAT VI | 32 | -0.44 | 0.029873006 | -0.41 | 0.09525151 | -0.53 | 0.019639608 | -0.47 | 0.13298897 | 0.47 | 0.6083403 | -0.44 | 0.0010093258 | -0.5 | 0.36622906 | - | - | - | |||||
| 30.2.19 SIGNALLING.RECEPTOR KINASES.LEGUME-LECTIN | 25 | 0.68 | 5.311018E-4 | 0.68 | 4.387366E-4 | 0.64 | 4.891564E-4 | 0.52 | 0.30005696 | 0.4 | 0.4670752 | 0.6 | 0.22157839 | 0.68 | 0.014431678 | + | + | + | + | ||||
| 30.2.24 SIGNALLING.RECEPTOR KINASES.S-LOCUS GLYCOPROTEIN LIKE | 26 | 0.42 | 0.10619319 | 0.42 | 0.28495482 | 0.5 | 0.022523744 | 0.54 | 0.34974986 | -0.19 | 0.5066824 | 0.69 | 0.05942564 | 0.42 | 0.03720701 | + | + | ||||||
| 30.3 SIGNALLING.CALCIUM | 238 | 0.33 | 0.16819595 | 0.2 | 0.22077733 | 0.3 | 0.08298942 | -0.16 | 0.111446895 | -0.16 | 0.12545127 | -0.22 | 0.38914147 | 0.26 | 0.02944596 | + | |||||||
| 30.4.1 SIGNALLING.PHOSPHINOSITIDES.PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE | 22 | 0.59 | 0.65782493 | 0.36 | 0.920576 | 0.64 | 0.19061351 | 0.82 | 0.026724309 | 0.95 | 0.061923232 | 0.73 | 0.028416736 | -0.45 | 0.27307945 | + | + | ||||||
| 30.6 SIGNALLING.MAP KINASES | 70 | 0.4 | 0.061934687 | 0.4 | 0.28715125 | 0.37 | 0.016283862 | 0.4 | 0.060562007 | 0.3 | 0.32171714 | 0.51 | 0.009264792 | 0.27 | 0.49721476 | + | + | ||||||
| 30.11 SIGNALLING.LIGHT | 137 | 0.24 | 0.4591947 | 0.28 | 0.45390198 | 0.26 | 0.5774002 | 0.47 | 0.024941403 | 0.52 | 0.08470214 | 0.42 | 0.014448512 | -0.26 | 0.66970533 | + | + | ||||||
| 31.3 CELL.CYCLE | 105 | -0.23 | 0.059907183 | -0.17 | 0.14173974 | -0.22 | 0.049593944 | -0.37 | 0.076707095 | 0.21 | 0.7761407 | -0.21 | 0.009707306 | -0.27 | 0.36183563 | - | - | ||||||
| 31.3.1 CELL.CYCLE.PEPTIDYLPROLYL ISOMERASE | 38 | -0.34 | 0.733659 | -0.18 | 0.9928613 | -0.32 | 0.31286275 | -0.45 | 0.009380837 | -0.55 | 0.06741125 | -0.53 | 0.048852943 | 0.53 | 0.99491733 | - | - | ||||||
| 33.1 DEVELOPMENT.STORAGE PROTEINS | 16 | 0.5 | 0.0039873696 | 0.44 | 0.007455917 | 0.5 | 0.0015017855 | 0.63 | 0.31968057 | -0.19 | 0.79372007 | 0.81 | 0.19071557 | 0.5 | 0.034799278 | + | + | + | + | ||||
| 33.2 DEVELOPMENT.LATE EMBRYOGENESIS ABUNDANT | 20 | -0.25 | 0.9947229 | -0.2 | 0.8637539 | -0.35 | 0.7028124 | -0.25 | 0.024278346 | -0.2 | 0.09088748 | -0.3 | 0.22758222 | 0.35 | 0.7179628 | - | |||||||
| 33.3 DEVELOPMENT.SQUAMOSA PROMOTER BINDING LIKE (SPL) | 23 | 0.26 | 0.6269394 | 0.26 | 0.88053906 | 0.39 | 0.2667489 | 0.57 | 0.06545853 | 0.26 | 0.5419834 | 0.52 | 0.045515183 | 0.13 | 0.9727676 | + | |||||||
| 34.2 TRANSPORT.SUGARS | 53 | 0.32 | 0.039852962 | 0.19 | 0.07090984 | 0.42 | 0.023324626 | 0.32 | 0.19666202 | 0.23 | 0.7821433 | 0.34 | 0.08502282 | 0.3 | 0.10484578 | + | + | ||||||
| 34.3 TRANSPORT.AMINO ACIDS | 57 | 0.42 | 0.0090678055 | 0.4 | 0.010675183 | 0.35 | 0.016327389 | 0.32 | 0.006438417 | 0.18 | 0.30911893 | 0.3 | 0.0017604637 | 0.35 | 0.23792817 | + | + | + | + | + | |||
| 34.4 TRANSPORT.NITRATE | 15 | 0.53 | 0.009838893 | 0.53 | 0.049854167 | 0.53 | 0.003144083 | 0.47 | 0.008825157 | 0.73 | 0.103615664 | 0.47 | 0.0021520716 | 0.4 | 0.1131374 | + | + | + | + | + | |||
| 34.10 TRANSPORT.NUCLEOTIDES | 16 | 0.44 | 0.17346205 | 0.44 | 0.08502921 | 0.25 | 0.15890177 | 0.31 | 0.5503943 | -0.31 | 0.2272854 | 0.44 | 0.02712706 | 0.38 | 0.19273917 | + | |||||||
| 34.12 TRANSPORT.METAL | 82 | 0.48 | 0.019830966 | 0.43 | 0.024233364 | 0.35 | 0.0739362 | 0.41 | 0.38803294 | -0.13 | 0.61367685 | 0.5 | 0.04030466 | 0.23 | 0.066981815 | + | + | + | |||||
| 34.13 TRANSPORT.PEPTIDES AND OLIGOPEPTIDES | 46 | 0.41 | 0.0014277414 | 0.37 | 0.0060728723 | 0.35 | 0.002947578 | 0.43 | 0.094972834 | 0.11 | 0.82442504 | 0.35 | 0.03518032 | 0.37 | 0.01644566 | + | + | + | + | + | |||
| 34.16 TRANSPORT.ABC TRANSPORTERS AND MULTIDRUG RESISTANCE SYSTEMS | 98 | 0.23 | 0.10757597 | 0.17 | 0.17659272 | 0.26 | 0.076915294 | 0.4 | 0.03920121 | 0.49 | 0.20609249 | 0.37 | 0.025028309 | 0.16 | 0.34510082 | + | + | ||||||
| 34.19.1 TRANSPORT.MAJOR INTRINSIC PROTEINS.PIP | 22 | 0.45 | 0.0028360193 | 0.45 | 0.0038156267 | 0.36 | 0.11082029 | 0.64 | 0.007071973 | 0.64 | 0.05460933 | 0.59 | 0.014365824 | 0.55 | 0.22007534 | + | + | + | + | ||||
| 34.22 TRANSPORT.CYCLIC NUCLEOTIDE OR CALCIUM REGULATED CHANNELS | 19 | 0.32 | 0.007604857 | 0.32 | 0.013851852 | 0.32 | 0.0035390612 | 0.26 | 0.09648176 | 0.26 | 0.4525727 | 0.26 | 0.15086642 | 0.42 | 0.009147273 | + | + | + | + | ||||
| 35.1.5 NOT ASSIGNED.NO ONTOLOGY.PENTATRICOPEPTIDE (PPR) REPEAT-CONTAINING PROTEIN | 344 | -0.41 | 0.0017006496 | -0.37 | 3.9840693E-4 | -0.4 | 0.020016717 | 0.38 | 0.17218587 | 0.44 | 0.09157254 | 0.37 | 0.5025684 | -0.62 | 0 | - | - | - | - | ||||
| 35.1.27 NOT ASSIGNED.NO ONTOLOGY.TETRATRICOPEPTIDE REPEAT (TPR) | 177 | -0.32 | 0.048738062 | -0.36 | 0.014375224 | -0.29 | 0.22916399 | 0.32 | 0.6724545 | 0.45 | 0.45498872 | 0.23 | 0.9454502 | -0.39 | 0.001440207 | - | - | - | |||||
| 35.1.40 NOT ASSIGNED.NO ONTOLOGY.GLYCINE RICH PROTEINS | 17 | 0.59 | 0.03836053 | 0.65 | 0.030568654 | 0.53 | 0.022884183 | 0.47 | 0.17253765 | 0.41 | 0.29081956 | 0.47 | 0.18719077 | 0.53 | 0.086896986 | + | + | + |
