Selected Cell
Cell:
Value:
Metadata
Data
A
B
C
D
E
F
G
H
I
J
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
Metadata | Values (examples) | ||||||||
Asset Title | Kinetics Pgm1 S63A | ||||||||
Uploader | Sofia Doello | ||||||||
Uploader SEEK ID | |||||||||
Project | SCyCode | ||||||||
ASSAY | |||||||||
Assay SEEK ID | 1466 | ||||||||
Assay Title | Comparison of PGM1 versions | ||||||||
Assay_type | enzymaticAssay | ||||||||
Technology_type | enzymatic activity measurements | ||||||||
Description | Kinetic characterisation of Pgm1 variants. Expermental data for enzyme reaction rates with increasing concentrations of glucose-1-phosphate | ||||||||
Experimentalist | Sofia Doello | ||||||||
Date | |||||||||
SOP | https://fairdomhub.org/sops/490 | ||||||||
Publication (optional) | doi: 10.1101/2021.04.15.439997 | ||||||||
Experimental_conditions | |||||||||
Item | temperature | ||||||||
Compound (if concentration) | |||||||||
Unit | °C | ||||||||
Start_value (optional) | 30 | ||||||||
End_value (optional) | 30 | ||||||||
Comments | |||||||||
FACTORS_STUDIED | |||||||||
Item | concentration | ||||||||
Compound (if concentration) | Glucose-1-phosphate | ||||||||
Unit | mM | ||||||||
Start_value (optional) | 3 | ||||||||
End_value (optional) | 0.0625 | ||||||||
SD (optional) | |||||||||
Comments | |||||||||
ENZYME IDENTITY | |||||||||
Enzyme Name (IUBMB) | Phosphoglucomutase 1 S63A | ||||||||
EC Number | 5.4.2.2 (S63A) | ||||||||
A
B
C
D
E
F
G
H
I
J
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
Concentration | |||||||||
Glucose-1-phosphate (mM) | Activity (u/mg) | ||||||||
(mM) | Long-PGM1 | Short-PGM1 | |||||||
3 | 66.20968 | 70.08065 | 66.37097 | 183.3685 | 180.9532 | 182.571 | |||
1 | 64.87903 | 64.87903 | 63.14516 | 146.9516 | 140.7581 | 143.5645 | |||
0.5 | 48.06452 | 46.65323 | 46.49194 | 105.3387 | 101.8065 | 102.7742 | |||
0.25 | 27.98387 | 27.70161 | 28.30645 | 59.95161 | 59.66129 | 57.87097 | |||
0.125 | 15.40323 | 15.72581 | 15.32258 | 33.14516 | 33.48387 | 31.93548 | |||
0.0625 | 8.064516 | 7.943548 | 7.903226 | 17.03226 | 17.03226 | 16.59677 | |||